ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29b10 |
|---|---|
| Clone Library Name | barley_pub |
>UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 273 Score = 196 bits (497), Expect = 5e-50 Identities = 106/160 (66%), Positives = 123/160 (76%), Gaps = 5/160 (3%) Frame = +1 Query: 91 MLRVAGRRISSHLAWRPXXXXXXGRTPLVG-GLPGEDFPWDQN---PRFAIESPFYVAAR 258 MLRVAGRR+SS L+WRP G PL G G+P D + PRF+I+SPF+VA+R Sbjct: 1 MLRVAGRRLSSSLSWRPAAAVARG--PLAGAGVPDRDDDSARGRSQPRFSIDSPFFVASR 58 Query: 259 GFSA-ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLS 435 GFS+ E++VPR+QD GLA+LPAT AA+KNP K+VYDEYNH+RYPPGDPSKRAFAYFVLS Sbjct: 59 GFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLS 118 Query: 436 GGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 GGRF+YAS SMSASKDVLALASLEVDLSSI Sbjct: 119 GGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSI 158
>UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 265 Score = 145 bits (366), Expect = 7e-35 Identities = 84/155 (54%), Positives = 101/155 (65%) Frame = +1 Query: 91 MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 270 MLRVAGRR+SS A + +D ++P ++ S F RGFS+ Sbjct: 1 MLRVAGRRLSSSAARSSSTFFTRSSFTVT-----DDSSPARSPSPSLTSSFLDQIRGFSS 55 Query: 271 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 450 S+ P Q +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV Sbjct: 56 NSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 115 Query: 451 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 YAS SMSASKDVLALASLEVDLSSI Sbjct: 116 YASSVRLLILKFVLSMSASKDVLALASLEVDLSSI 150
>UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfur subunit 3,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 3) (RISP3) Length = 268 Score = 144 bits (363), Expect = 2e-34 Identities = 84/155 (54%), Positives = 100/155 (64%) Frame = +1 Query: 91 MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 270 MLR+AGR++SS A R R P +P ++ S F RGFS+ Sbjct: 1 MLRIAGRKLSSSAATRSSSAFFT-RNPFTFTDDSSSPARSPSPA-SLASQFLDQFRGFSS 58 Query: 271 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 450 S+ P Q +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV Sbjct: 59 NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 118 Query: 451 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 YAS SMSASKDVLALASLEVDLSSI Sbjct: 119 YASLVRLLILKFVLSMSASKDVLALASLEVDLSSI 153
>UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 5) (RISP5) Length = 268 Score = 144 bits (362), Expect = 2e-34 Identities = 84/155 (54%), Positives = 100/155 (64%) Frame = +1 Query: 91 MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 270 MLR+AGR++SS A R R P +P ++ S F RGFS+ Sbjct: 1 MLRIAGRKLSSSAAARSSSAFFT-RNPFTFTDDSSSPTRSPSPT-SLASQFLDQFRGFSS 58 Query: 271 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 450 S+ P Q +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV Sbjct: 59 NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 118 Query: 451 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 YAS SMSASKDVLALASLEVDLSSI Sbjct: 119 YASLVRLLILKFVLSMSASKDVLALASLEVDLSSI 153
>UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 2) (RISP2) Length = 272 Score = 142 bits (359), Expect = 5e-34 Identities = 86/159 (54%), Positives = 101/159 (63%), Gaps = 4/159 (2%) Frame = +1 Query: 91 MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRF---AIESPFYVAARG 261 MLR+AGRR SS W P + + +PR ++ S F RG Sbjct: 1 MLRIAGRRASSLSRW-PVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRG 59 Query: 262 FSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSG 438 FS+ S V + D+GL +LP T AA+KNP +KIVYDE+NH+RYPPGDPSKRAFAYFVL+G Sbjct: 60 FSSNS-VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 118 Query: 439 GRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 GRFVYAS SMSASKDVLALASLEVDLSSI Sbjct: 119 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSI 157
>UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfur subunit 1,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 1) (RISP1) (Fragment) Length = 258 Score = 135 bits (340), Expect = 8e-32 Identities = 73/111 (65%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Frame = +1 Query: 226 AIESPFYVAARGFSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDP 402 ++ S F RGFS+ S+ P + D+GL +LP T AA+KNP +KIVYDE+NH+RYPPGDP Sbjct: 34 SLASVFLHHTRGFSSNSVSP-AHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDP 92 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 SKRAFAYFVL+GGRFVYAS SMSASKDVLALASLEVDLSSI Sbjct: 93 SKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSI 143
>UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfur subunit 4,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 4) (RISP4) Length = 236 Score = 131 bits (329), Expect = 1e-30 Identities = 71/111 (63%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Frame = +1 Query: 226 AIESPFYVAARGFSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDP 402 ++ S + GFS+ S V + D+GL +LP T AA+KNP +KIVYDE+NH+RYPPGDP Sbjct: 12 SVTSNSFSIISGFSSNS-VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDP 70 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 SKRAFAYFVL+GGRFVYAS SMSASKDVLALASLEVDLSSI Sbjct: 71 SKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSI 121
>UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 231 Score = 34.7 bits (78), Expect = 0.19 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +1 Query: 415 FAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 F+YF++ + A+ +MSAS DVLA+A +EVDL++I Sbjct: 70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAI 116
>UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 215 Score = 34.3 bits (77), Expect = 0.24 Identities = 16/49 (32%), Positives = 30/49 (61%) Frame = +1 Query: 409 RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 R++AYF++ + ++ SM+A+ DVLA+A +EV+L++I Sbjct: 53 RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAI 101
>UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.9 bits (76), Expect = 0.32 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +1 Query: 358 VYDEYNHKRYPPGDPSK---------RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASK 510 V D Y+++R D +K + F+Y V + A SMSAS Sbjct: 85 VPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASA 144 Query: 511 DVLALASLEVDLSSI 555 DVLA+A +E++LS I Sbjct: 145 DVLAMAKIEINLSDI 159
>UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.5 bits (75), Expect = 0.41 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + A SMSAS DVLALA +E+ LS I Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDI 159
>UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.5 bits (75), Expect = 0.41 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 ++++F+Y V + A SMSAS DVLA+A +EV LS I Sbjct: 109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDI 159
>UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.5 bits (75), Expect = 0.41 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +1 Query: 358 VYDEYNHKRYPPGDPSK---------RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASK 510 V D Y+++R D +K + F+Y V + A SMSAS Sbjct: 85 VPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASA 144 Query: 511 DVLALASLEVDLSSI 555 DVLA+A +E++LS I Sbjct: 145 DVLAMAKIEINLSDI 159
>UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.1 bits (74), Expect = 0.54 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V A SMSAS DVLALA +E+ LS I Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDI 159
>UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.1 bits (74), Expect = 0.54 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V A SMSAS DVLALA +E+ LS I Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDI 159
>UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.1 bits (74), Expect = 0.54 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V A SMSAS DVLALA +E+ LS I Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDI 159
>UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 33.1 bits (74), Expect = 0.54 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V A SMSAS DVLALA +E+ LS I Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDI 159
>UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 32.7 bits (73), Expect = 0.71 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V A SMSAS DVLALA +E+ LS I Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLSDI 159
>UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) (Liver regeneration-related protein LRRGT00195) Length = 274 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + A SMSAS DVLA++ +E+ LS I Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDI 159
>UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + A SMSAS DVLA++ +E+ LS I Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDI 159
>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) [Contains: Ubiquinol-cytochrome c reductase 8 kDa protein (Complex III subunit IX)] Length = 274 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + A SMSAS DVLA++ +E+ LS I Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDI 159
>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319 Query: 270 SRK 262 K Sbjct: 320 QNK 322
>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319 Query: 270 SRK 262 K Sbjct: 320 QNK 322
>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRAALKCYQWLKEKIISEEGRKQ 319 Query: 270 SRK 262 K Sbjct: 320 QTK 322
>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319 Query: 270 SRK 262 K Sbjct: 320 QNK 322
>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 419 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 282 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 337 Query: 270 SRK 262 K Sbjct: 338 QNK 340
>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 419 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 282 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 337 Query: 270 SRK 262 K Sbjct: 338 QNK 340
>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 408 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -3 Query: 441 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 271 P HK+G G + W PL ++ +G G+ +SSR+ C++ + I++ ++ Sbjct: 271 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 326 Query: 270 SRK 262 K Sbjct: 327 QNK 329
>UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + SMSAS DVLA++ +E+ LS I Sbjct: 109 ARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDI 159
>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2207 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = +1 Query: 193 EDFPWDQNPRFAIESPFYVAARGFSAESLVPRSQDVGLAELPATAAALKNPCAKIVYDEY 372 +D P D +PR I+ +Y+ G + L+ +PA ++NP ++ + E+ Sbjct: 1097 KDDPGDMDPRSVIDWDYYLERLGSVVQKLIT---------IPAALQKIRNPVPRVAHPEW 1147 Query: 373 NHKR 384 +R Sbjct: 1148 LQRR 1151
>UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 228 Score = 30.4 bits (67), Expect = 3.5 Identities = 23/65 (35%), Positives = 31/65 (47%) Frame = +1 Query: 361 YDEYNHKRYPPGDPSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEV 540 + EY K GD S R +Y ++ + A+ S SAS DVLA++ EV Sbjct: 53 FSEYQTKS--TGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEV 109 Query: 541 DLSSI 555 DLS I Sbjct: 110 DLSKI 114
>UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + SMSAS DVLA++ +E+ LS I Sbjct: 109 ARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLSDI 159
>UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 +++ F+Y V + SMSAS DVLA++ +E+ LS I Sbjct: 109 ARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDI 159
>MBHL_RHILV (P18636) Uptake hydrogenase large subunit (EC 1.12.99.6)| (Hydrogenlyase) (Membrane-bound hydrogenase large subunit) Length = 596 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = -3 Query: 390 WVPLVVILVVDNFGTGILQSSRSCWELSQPYI---LAPRNKRFSRKASGSNVEGGFNGEA 220 WV +V L D T L S S W LS P + R K+F + G+ G A Sbjct: 130 WVDVVSALSADPKATSALAQSISDWPLSSPGYFKDIQTRLKKFVESGQLGPFKNGYWGNA 189 Query: 219 RILIPGE 199 +P E Sbjct: 190 SYKLPPE 196
>CBIB_SALTY (Q05600) Cobalamin biosynthesis protein cbiB| Length = 319 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = -1 Query: 131 ARWEDMRR--PATLSIVAVGVAASPRSFALRLSGGSGGRVWWRDR 3 AR +D+ PA LS + +G+AA RLSG R+ WRDR Sbjct: 199 ARMDDVANYLPARLSWLLLGIAAG----LCRLSGWRALRIGWRDR 239
>CBIB_SALTI (Q8Z5M7) Cobalamin biosynthesis protein cbiB| Length = 319 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = -1 Query: 131 ARWEDMRR--PATLSIVAVGVAASPRSFALRLSGGSGGRVWWRDR 3 AR +D+ PA LS + +G+AA RLSG R+ WRDR Sbjct: 199 ARMDDVANYLPARLSWLLLGIAAG----LCRLSGWRALRIGWRDR 239
>UCRI_RICPR (Q9ZDQ5) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC| 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 177 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/21 (66%), Positives = 18/21 (85%) Frame = +1 Query: 493 SMSASKDVLALASLEVDLSSI 555 S + S DVLAL+S+EVDLS+I Sbjct: 40 SFNPSADVLALSSIEVDLSNI 60
>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch| Length = 5412 Score = 29.3 bits (64), Expect = 7.8 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 7/144 (4%) Frame = +1 Query: 4 RSRHQTRPPDPPDSRRANERGEAATPTATMLRVA--GRRISSHLAWRPXXXXXXGRTPLV 177 RSR T+PP D + A + ++PT T A + + RP TP Sbjct: 689 RSRIDTKPPKSMDRKLAKRDEKKSSPTTTPAARAPVAQNAKPKVLSRPATKSSPSSTPAK 748 Query: 178 GGLPGEDFPWDQNPRFA--IESPFYVAAR--GFSAESLVPRSQDVGLAELPATAAALKNP 345 + ++ + A +++ V+ R ++E V + + A AT A + P Sbjct: 749 SAKEANNRKVLESKQQAARVQATSTVSRRVTSTASERRVQQQAEAKTAATGATQATQRKP 808 Query: 346 CAKIVYDEYNHKRYP-PGDPSKRA 414 ++ KR P PG P K+A Sbjct: 809 ISRRPRGVSPSKRAPAPGSPVKQA 832
>B2_DAUCA (P37707) B2 protein| Length = 207 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -1 Query: 443 LPPLNTK*AKARLLGSPGGYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 291 LPP +A G P L+LY+ T G F AA+ G++ +PT+W Sbjct: 97 LPPRYRDSVRAITPGLP----LFLYNYSTHQLHGVFEAASFGGTNIDPTAW 143
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 29.3 bits (64), Expect = 7.8 Identities = 22/91 (24%), Positives = 35/91 (38%) Frame = -2 Query: 490 GQTLGRANATTRHTQISHRSTQSRQRHACWGHQVGTSCGYTRRRQFWHRDSSEQPQLLGA 311 G + N+T ++ R + R RH +G T C RQFW D E Sbjct: 68 GIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKC----PRQFWGPDCKE------- 116 Query: 310 QPTLHPGSSEQEIQPKSLWQQRRRGIQWRSA 218 + + HP +++ + RR G + A Sbjct: 117 RCSCHPHGQCEDVTGQCTCHARRWGARCEHA 147
>UCRI_PARDE (P05417) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC| 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 190 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 403 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSI 555 ++R F Y+ +G V A M+ S DV ALAS++VD+S + Sbjct: 14 TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGV 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.133 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,060,137 Number of Sequences: 219361 Number of extensions: 1661445 Number of successful extensions: 5791 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 5531 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5780 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
