ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29b07 |
|---|---|
| Clone Library Name | barley_pub |
>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor| Length = 910 Score = 37.0 bits (84), Expect = 0.037 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRVGADE--------DVEADEPDGRAGGASIDGEVDHEVADKVHGG 394 V D G+ R + G + A++ + E D P+G+ G S +G E + + GG Sbjct: 308 VEDQGEPRPSLDAGSAIEANKQSEYTQARETENDSPEGQVSGMSEEGLA--EASSEEEGG 365 Query: 393 ANGEHDPGRRDLVDEPGEDAEVGAEVLEEG 304 + G +E GED+ GA EEG Sbjct: 366 EEDGSENGEVPFKEESGEDSGDGASSEEEG 395
>MCH1_ASPFU (Q4WVT3) Probable transporter mch1| Length = 619 Score = 36.6 bits (83), Expect = 0.049 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 9/119 (7%) Frame = +1 Query: 220 SGATYIFSIYSKTLKSSLGYNQQTLNTISFFKDLGANLGV--FSGLINEVTPPWVVLAIG 393 +G+ FS+Y + L Y+Q +N +S ++ L V F L + TP + L G Sbjct: 94 AGSITAFSLYGPLFLTRLHYSQLQVNAVSIAAEISMYLPVPLFGYLCDRYTPSPLALLSG 153 Query: 394 AAMNLVGYLMVYLAV-------DGRTARPPVWLVCLYIFIGANSQSFANTGALVTCVKN 549 GYL+ A G PP +V ++ IG + S A+ TC KN Sbjct: 154 LVFG-GGYLLAAFAYRSGPLPEAGGEGWPPWVMVVAFVAIG-TATSCMYLAAVTTCAKN 210
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 35.4 bits (80), Expect = 0.11 Identities = 25/81 (30%), Positives = 36/81 (44%) Frame = -3 Query: 543 DAGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRR 364 D GDE EG G DED E DE + +G+ E D+ G GE + Sbjct: 451 DEGDEGDEGDEGEDEGEDEDDEEDEGED-------EGDEGDEGEDEGDEGDEGEDEGDEG 503 Query: 363 DLVDEPGEDAEVGAEVLEEGD 301 D + G++ + G + +EGD Sbjct: 504 DEGKDEGDEGDEGKDEGDEGD 524
>CD2L1_MOUSE (P24788) PITSLRE serine/threonine-protein kinase CDC2L1 (EC| 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1) Length = 784 Score = 34.7 bits (78), Expect = 0.18 Identities = 26/102 (25%), Positives = 45/102 (44%) Frame = -3 Query: 540 AGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRD 361 A A G G +E+ E +E +G S + E + E ++ G+N E + Sbjct: 279 AESSSAESGSGSEEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEEETGSNSEE---ASE 335 Query: 360 LVDEPGEDAEVGAEVLEEGDGVERLLVVPQRRLERLGVDAED 235 E D E+ + E+ + +LVVP+ R +R D+E+ Sbjct: 336 QSAEEVSDEEMSED--EDRENENHILVVPESRFDRDSGDSEE 375
>CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC2L1 (EC| 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1) (CLK-1) (CDK11) (p58 CLK-1) Length = 795 Score = 33.1 bits (74), Expect = 0.54 Identities = 21/88 (23%), Positives = 41/88 (46%) Frame = -3 Query: 498 GADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEVGAE 319 G++E+ E +E + G S + E + E ++ + +E E+ E+ + Sbjct: 302 GSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEE-EMSED 360 Query: 318 VLEEGDGVERLLVVPQRRLERLGVDAED 235 EE + LLVVP+ R +R ++E+ Sbjct: 361 --EERENENHLLVVPESRFDRDSGESEE 386
>VID30_YEAST (P53076) Vacuolar import and degradation protein VID30| (Glucose-induced degradation protein 1) Length = 958 Score = 33.1 bits (74), Expect = 0.54 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -3 Query: 492 DEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEVGA 322 D+D + D+ D + S++GEVD + D G + H+ G + G DA+V + Sbjct: 175 DDDDDDDDDDDESDLESLEGEVDTDTDDNNEGDGSDNHEEGGEE--GSRGADADVSS 229
>MDN1_HUMAN (Q9NU22) Midasin (MIDAS-containing protein)| Length = 5596 Score = 33.1 bits (74), Expect = 0.54 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Frame = -3 Query: 546 LDAGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHE-----VADKVHGGANGE 382 LD+G+ + + E+ EAD DG G I+ ++D D HG Sbjct: 4816 LDSGNSNKDKSQQDKKEEKEEAEAD--DGGQGEDKINEQIDERDYDENEVDPYHGNQEKV 4873 Query: 381 HDPGRRDLVDEPGEDAE--VGAEVLEEGDGVERLLVVPQRRLERLGVDAEDVG 229 +P DL D+ D+E G E + +G E + + + E G +AE+ G Sbjct: 4874 PEPEALDLPDDLNLDSEDKNGGEDTDNEEGEEENPLEIKEKPEEAGHEAEERG 4926
>CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2 (EC| 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 2) (CDK11) Length = 780 Score = 32.7 bits (73), Expect = 0.70 Identities = 22/88 (25%), Positives = 40/88 (45%) Frame = -3 Query: 498 GADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEVGAE 319 G++E+ E +E + G S + E + E ++ G + E + V E + Sbjct: 290 GSEEEEEEEEEEEEEGSTSEESEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSED---- 345 Query: 318 VLEEGDGVERLLVVPQRRLERLGVDAED 235 EE + LLVVP+ R +R ++E+ Sbjct: 346 --EERENENHLLVVPESRFDRDSGESEE 371
>GBX2_HUMAN (P52951) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 348 Score = 32.7 bits (73), Expect = 0.70 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -3 Query: 498 GADEDVEADEPDGRAGGASIDGEVDHEVADKVHG-GANGEHDPGRRDLVDEPGEDAEVGA 322 G DE D+P G+ S++ +VD+ D + G A+ E DPG L + P G+ Sbjct: 182 GKDESKVEDDPKGKEESFSLESDVDYSSDDNLTGQAAHKEEDPGHA-LEETPPSSGAAGS 240
>MRE11_METKA (Q8TXI3) DNA double-strand break repair protein mre11| Length = 451 Score = 32.7 bits (73), Expect = 0.70 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 12/120 (10%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRVGADEDVEADEPDG--RAGGAS-----IDGEVDHEVADKVHGGA 391 V++ + R V EG D+E +G RA A+ + +V EVA ++ G Sbjct: 314 VVELRERRREVEEGDETEGPLDLEGIIREGVKRARAATLTRVDVPDDVVVEVALEILRGV 373 Query: 390 NGEHDPGRRDLV-----DEPGEDAEVGAEVLEEGDGVERLLVVPQRRLERLGVDAEDVGR 226 ++ P D+ + P E +E +E EE DG E L V + ++E G +E + R Sbjct: 374 REDNPPDLGDVEGIVAGEPPSEGSEESSEEPEESDGEEVGLEVEEVKVESRGTSSEGMSR 433
>MCH1_EMENI (Q5AXV1) Probable transporter mch1| Length = 615 Score = 32.7 bits (73), Expect = 0.70 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 10/126 (7%) Frame = +1 Query: 202 FAILTASGATYI--FSIYSKTLKSSLGYNQQTLNTISFFKDLGANLGVFSG--LINEVTP 369 + ++T GA I FS+Y L + L Y Q +N +S + L V L + +P Sbjct: 86 WGVITCLGAGSITAFSLYGPLLLTRLNYTQLRVNEVSIAAGISMYLPVSLAGYLCDRYSP 145 Query: 370 PWVVLAIGAAMNLVGYLMVYLAVDGRTARP-----PVW-LVCLYIFIGANSQSFANTGAL 531 + L G A L L ++ G P W +V +I IG + S A+ Sbjct: 146 SPLTLFAGIAFGLGYSLAAFVYKSGPPPDAGGNGWPFWVMVVAFIAIGVATCSM-YLAAV 204 Query: 532 VTCVKN 549 TC KN Sbjct: 205 TTCAKN 210
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 32.7 bits (73), Expect = 0.70 Identities = 37/99 (37%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -3 Query: 510 GLRVGADEDVEADEPDGRA-GGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPG-ED 337 G RV AD DV+ P GRA G +DG V H DEP Sbjct: 653 GGRVQADADVDVVVPHGRAVRGPVLDG-VQH----------------------DEPAPRR 689 Query: 336 AEVGAEVLEEGDGVERLLVVPQRRLER-LGVDAEDVGRP 223 AE AEVL E VP+R + LGV+A DVG P Sbjct: 690 AEPRAEVLHGAGEAE----VPRREQQHPLGVEAADVGAP 724
>YM30_YEAST (Q03795) Hypothetical 60.0 kDa protein in IMP1-HLJ1 intergenic| region Length = 547 Score = 32.3 bits (72), Expect = 0.92 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = +1 Query: 208 ILTASGATYIFSIYSKTLKSSLGYNQQTLNTISFFKDLGANL-GVFSGLINEVTPPWVVL 384 + +G Y+FS Y+ L S + +SF +G++L G+ +G++ + +P L Sbjct: 28 VALGAGTPYLFSFYAPQLLSKCHIPVSASSKLSFSLTIGSSLMGILAGIVVDRSPKLSCL 87 Query: 385 AIGAAMNLVGYLMVYL 432 IG+ + YL++ L Sbjct: 88 -IGSMCVFIAYLILNL 102
>MCH1_YARLI (Q6CGU8) Probable transporter MCH1| Length = 486 Score = 32.3 bits (72), Expect = 0.92 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +1 Query: 187 TVFASFAILTASGATY-IFSIYSKTLKSSLGYNQQTLNTISFFKDLGANL 333 ++FA + T S A+ +FS+Y +TL+ LG+ Q +N++S LG L Sbjct: 30 SIFALSILGTLSAASISLFSMYGQTLQHKLGFTQVQVNSVSISSLLGMYL 79
>GBX2_MOUSE (P48031) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (Homeobox protein STRA7) Length = 348 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 498 GADEDVEADEPDGRAGGASIDGEVDHEVADKVHG-GANGEHDPG 370 G DE D+P G+ S++ +VD+ D + G A+ E DPG Sbjct: 182 GKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEEDPG 225
>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1585 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 6/57 (10%) Frame = -3 Query: 444 SIDGEVDHEVADKVHGGANGEHDPG---RRDLVDEPGEDAEV---GAEVLEEGDGVE 292 SID ++ E DK+ G + E DP + V+E GE+AE GAE + EG+G++ Sbjct: 536 SIDKVLESE-QDKMSQGFHPERDPSDLKKVKAVEENGEEAEPVRNGAESVSEGEGID 591
>Y1856_MYCBO (P64896) Hypothetical protein Mb1856 precursor| Length = 292 Score = 31.6 bits (70), Expect = 1.6 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 4/113 (3%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPG 370 +LD+ +R + + A + G A+++ A + GA G PG Sbjct: 108 LLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAVGATGPG 167 Query: 369 RRDLVDEPGEDA--EVGAEVLEE--GDGVERLLVVPQRRLERLGVDAEDVGRP 223 +D+PG EV +V+ E G E + + R R+GVD VG P Sbjct: 168 VMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVP 220
>Y1825_MYCTU (P64895) Hypothetical protein Rv1825/MT1873 precursor| Length = 292 Score = 31.6 bits (70), Expect = 1.6 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 4/113 (3%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPG 370 +LD+ +R + + A + G A+++ A + GA G PG Sbjct: 108 LLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAVGATGPG 167 Query: 369 RRDLVDEPGEDA--EVGAEVLEE--GDGVERLLVVPQRRLERLGVDAEDVGRP 223 +D+PG EV +V+ E G E + + R R+GVD VG P Sbjct: 168 VMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVP 220
>SWR1_ASPFU (Q4WAS9) Helicase swr1 (EC 3.6.1.-)| Length = 1695 Score = 31.6 bits (70), Expect = 1.6 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 11/79 (13%) Frame = -3 Query: 498 GADEDVEADEPDGRAGGAS-----------IDGEVDHEVADKVHGGANGEHDPGRRDLVD 352 G D D E+D+ G G S D E D +A H G +G D G+ VD Sbjct: 607 GTDSDDESDDGPGLLGFFSSKDRVLNDAHRFDDEGDDPLAVSNHEGGSGFDDDGQSVSVD 666 Query: 351 EPGEDAEVGAEVLEEGDGV 295 E G+ E LE+ D V Sbjct: 667 EDGD------EELEDADEV 679
>FETUB_MOUSE (Q9QXC1) Fetuin-B precursor (IRL685)| Length = 388 Score = 31.2 bits (69), Expect = 2.0 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 9/110 (8%) Frame = -3 Query: 537 GDERAGVGEG-LRVGADEDVEADEPDGRAGGASIDG--EVDHEVADKVHGGANGEHDPGR 367 GDE V +G ++ P A SI E+D E ++ GG+ E P + Sbjct: 274 GDENPAVTQGPQKLPQKNTAPTSSPSVTAPRGSIQHLPELDDEKPEESKGGSPEEAFPVQ 333 Query: 366 RDLVDEP-GEDAEVGAEVLEEGDGVERLLVVP-----QRRLERLGVDAED 235 DL P G+ +V LE GD ++L+V+P QR E G + E+ Sbjct: 334 LDLTTNPQGDTLDVSFLYLEPGD--KKLVVLPFPGKEQRSAECPGPEKEN 381
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 31.2 bits (69), Expect = 2.0 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = -3 Query: 465 DGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEVG 325 DG +G + GE + A +G A + DPG R L PG++ EVG Sbjct: 655 DGASGQQGMKGE---KGARGPNGSAGEKGDPGNRGLPGPPGKNGEVG 698
>CO3_HUMAN (P01024) Complement C3 precursor [Contains: Complement C3 beta chain;| Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b alpha' chain; Complement C3c fragment; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment Length = 1663 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = -1 Query: 365 VTSLMSPEKTPRLAPRSLKKEMVLSVCWLYPSDD---LSVLE*MLKM*VAPDAVRMAKLA 195 VT +PE R P+ K M+L +C Y D +S+L+ + APD + +LA Sbjct: 1365 VTIKPAPETEKR--PQDAKNTMILEICTRYRGDQDATMSILDISMMTGFAPDTDDLKQLA 1422 Query: 194 NTVN 183 N V+ Sbjct: 1423 NGVD 1426
>SPX_LACLC (P60376) Regulatory protein spx| Length = 132 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -3 Query: 366 RDLVDEPGEDAEVGAEVLEEGDGVERLLVVPQRRLERLGVDAEDV 232 R+L+ +P E+ + + DGVE L+ R ++ LGVD ED+ Sbjct: 30 RNLIADPLSTTEISQILQKCDDGVEGLISSRNRFVKTLGVDFEDI 74
>SPX2_LACLA (P60375) Regulatory protein spx 2 (Thermoresistant insertional| mutant protein A) Length = 132 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -3 Query: 366 RDLVDEPGEDAEVGAEVLEEGDGVERLLVVPQRRLERLGVDAEDV 232 R+L+ +P E+ + + DGVE L+ R ++ LGVD ED+ Sbjct: 30 RNLIADPLSTTEISQILQKCDDGVEGLISSRNRFVKTLGVDFEDI 74
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 Query: 468 PDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEVGAEVLEEGD 301 P G AG A + GEV G A DPG+R PG G L++GD Sbjct: 360 PPGPAGAAGLPGEV---------GRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGD 406
>SANT_PLAF7 (Q03400) S-antigen protein precursor| Length = 585 Score = 30.8 bits (68), Expect = 2.7 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRV--GADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHD 376 V + G++ G +V G +++V D + G + EV + DKV G E Sbjct: 121 VSNGGEDEVSNGREDKVSNGGEDEVSNGREDKVSNGG--EDEVSNGREDKVSNGGEDEVS 178 Query: 375 PGRRDLVDEPGED 337 GR D V GED Sbjct: 179 NGREDKVSNGGED 191 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRV--GADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHD 376 V + G++ G +V G +++V D + G + EV + DKV G E Sbjct: 249 VSNGGEDEVSNGREDKVSNGGEDEVSNGREDKVSNGR--EDEVSNGREDKVSNGGEDEVS 306 Query: 375 PGRRDLVDEPGED 337 GR D V GED Sbjct: 307 NGREDKVSNGGED 319 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 498 GADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGED 337 G +++V D + G + EV + DKV G E GR D V GED Sbjct: 476 GGEDEVSNGREDKVSNGG--EDEVSNGREDKVSNGGEDEVSNGREDKVSNGGED 527
>NCKX1_BOVIN (Q28139) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1216 Score = 30.8 bits (68), Expect = 2.7 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 10/92 (10%) Frame = -3 Query: 537 GDERAG---VGEGLRVGADE-DVEADEP------DGRAGGASIDGEVDHEVADKVHGGAN 388 GDE G GEG V DE +++A E DG G +GE + G Sbjct: 896 GDEDEGEIQAGEGGEVKGDEGEIQAGEAGEVEGEDGEVEGGEDEGE--------IQAGEG 947 Query: 387 GEHDPGRRDLVDEPGEDAEVGAEVLEEGDGVE 292 GE + G ++L +AE+ E ++ +GV+ Sbjct: 948 GEGETGEQEL------NAEIQGEAKDDEEGVD 973
>MCH1_YEAST (Q07376) Probable transporter MCH1 (Monocarboxylate transporter| homolog 1) Length = 486 Score = 30.8 bits (68), Expect = 2.7 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 14/129 (10%) Frame = +1 Query: 202 FAILTA--SGATYIFSIYSKTLKSSLGYNQQTLNTISFFKDLGANL-GVFSGLINEVTPP 372 F++L+A +G + S+YS+ + L Y+ +NTI+ +LG L G+I + P Sbjct: 34 FSLLSAVSTGFITLISLYSQPWQKHLNYSSWQINTIASMTNLGMYLTPPILGMIADSHGP 93 Query: 373 WVVLAIGAAMNLVGYLMVY-----------LAVDGRTARPPVWLVCLYIFIGANSQSFAN 519 + L++ + ++G++ Y L++ G + ++FIG S S Sbjct: 94 -ITLSL---LAIIGFIPSYSYLAYVFNHPELSLGGNGDSSFNLSIICFVFIGI-STSALY 148 Query: 520 TGALVTCVK 546 AL+TC K Sbjct: 149 FSALLTCTK 157
>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (SBP)| Length = 279 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -3 Query: 492 DEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGED 337 D D E D+ DG G D + + + D GG+ + D G D D+ G+D Sbjct: 221 DNDKENDKDDGEGSGDDDDNDDEDDDKDD-DGGSGDDGDDGDDDEDDDGGDD 271
>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1615 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 Query: 357 RGHAALGRARHWRRHEPCRLPH 422 R HA + RARH RRH LPH Sbjct: 398 RMHARVSRARHERRHSDVALPH 419
>IE68_PRVKA (P24827) Immediate-early protein RSP40| Length = 364 Score = 30.4 bits (67), Expect = 3.5 Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 7/84 (8%) Frame = -3 Query: 534 DERAGVGEGLRVGA-------DEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHD 376 D G G G G DED + DE DG + E D E D G +GE D Sbjct: 283 DGSDGEGSGSDDGGDGEDEDEDEDEDEDEDDG-------EDEEDEEGEDGGEDGEDGEED 335 Query: 375 PGRRDLVDEPGEDAEVGAEVLEEG 304 DE GE E G + G Sbjct: 336 E------DEDGEGEEGGKDAARRG 353
>APX3_ORYSA (Q6TY83) Putative L-ascorbate peroxidase 3 (EC 1.11.1.11)| Length = 291 Score = 30.0 bits (66), Expect = 4.5 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = -3 Query: 417 VADKVHGGANGEHDPGRRDLVDEPGE----DAEVGAEVLEE 307 VA +V GG ++ PGRRD D P E DA+ GA L E Sbjct: 102 VAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLRE 142
>YQ33_CAEEL (Q09233) Putative cuticle collagen C09G5.3| Length = 283 Score = 30.0 bits (66), Expect = 4.5 Identities = 25/77 (32%), Positives = 28/77 (36%) Frame = -3 Query: 528 RAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDE 349 R +GE G A DGR G DG+ D V G E D G+ E Sbjct: 200 RKAIGEA---GPKGPPGAPGTDGRRGENGTDGD------DGVDGQPGDEGDAGKDGTPGE 250 Query: 348 PGEDAEVGAEVLEEGDG 298 PG E G E DG Sbjct: 251 PGPQGEQGTEGQPGTDG 267
>PASK_HUMAN (Q96RG2) PAS domain-containing serine/threonine-protein kinase (EC| 2.7.11.1) (PAS-kinase) (PASKIN) (hPASK) Length = 1323 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -1 Query: 395 APMASTTQGGVTSLMSPEKTPRLAPRSLKKEMVLSVCWL 279 +P+ S G V + + EK + + +KKE VL CW+ Sbjct: 1003 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWI 1041
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/81 (30%), Positives = 31/81 (38%) Frame = -3 Query: 540 AGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRD 361 A E+ G R G V P G AG DG+ E+ + G+ G D G Sbjct: 1089 APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKG-EIGEPGQKGSKG--DKGENG 1145 Query: 360 LVDEPGEDAEVGAEVLEEGDG 298 PG VGA + GDG Sbjct: 1146 PPGPPGLQGPVGAPGIAGGDG 1166
>NSBP1_HUMAN (P82970) Nucleosome-binding protein 1| Length = 282 Score = 29.6 bits (65), Expect = 5.9 Identities = 26/84 (30%), Positives = 33/84 (39%) Frame = -3 Query: 543 DAGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRR 364 D D+ GE + DE E D + + G GE E D G GE G Sbjct: 133 DEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEK--GEDAKEKED----GKKGEDGKGNG 186 Query: 363 DLVDEPGEDAEVGAEVLEEGDGVE 292 + E GED + + E GDG E Sbjct: 187 EDGKEKGEDEKEEEDRKETGDGKE 210
>YM09_PARTE (P15610) Hypothetical 22.9 kDa protein (ORF9)| Length = 204 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = -3 Query: 486 DVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEVGAEVLEE 307 D E G G AS D E D D+ ++GE + +D GED++ EE Sbjct: 51 DDEGGASSGDEGEASSDDEGDASSDDEEEASSDGEGVVEDEETLDAEGEDSD------EE 104 Query: 306 GDG 298 G+G Sbjct: 105 GEG 107
>PCS_RHIME (Q9KJY8) Phosphatidylcholine synthase (EC 2.7.8.24)| (CDP-diglyceride-choline O-phosphatidyltransferase) (PC synthase) Length = 241 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%) Frame = +1 Query: 136 VIFTAWFARQVAVGRWFTVFASFAILTASGATYIFSIYSKTLKSSLGYNQQTLNTISFFK 315 V+FT + + V VF S ILT ++ + K L+ LN F Sbjct: 145 VVFTLFVIQASEVTASIVVFLS-VILTFLPINFLHPVRVKRLRP--------LNLGIFL- 194 Query: 316 DLGANLGVFSGLINEVTPPWVV---LAIGAAMNLVGYLMVYLAVDGR 447 + + LG+++ L++ TPPWVV +A G + ++G+++ GR Sbjct: 195 -VWSVLGMYALLLHFETPPWVVVGVVATGLYLYVIGFILQIFPKLGR 240
>YBLE_SCHPO (Q10342) Hypothetical protein C106.14c in chromosome II| Length = 719 Score = 29.6 bits (65), Expect = 5.9 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 11/123 (8%) Frame = -3 Query: 549 VLDAGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPG 370 V + G G + V +D+++E + D A+ E D + + Sbjct: 530 VSEDGQNSDDSGGWIDVDSDDNIELSDSDEEEEKATARKESDEKGSSS------------ 577 Query: 369 RRDLVDEPGEDAEVGA---------EVLEEGDGVERLLVVPQRRLERL--GVDAEDVGRP 223 +++LVD E A E L E GV+RL+ P+R L+R V+A+++ P Sbjct: 578 QKELVDRMTELASQSILTPNDLKKLEELREQAGVDRLVNGPKRSLKRPDDAVEADEIEGP 637 Query: 222 RRR 214 R++ Sbjct: 638 RKK 640
>GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit| Length = 423 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = +1 Query: 199 SFAILTASGATYIFSIYSKTLKSSLGYNQQTLNTISFFKD-LGANLGVFSGLIN 357 +FA + G TYI+ S + S N +N + FFKD + G +G IN Sbjct: 242 TFASCGSDGYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSIVAGSDNGAIN 295
>RPOC_CHLCV (Q822J2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1393 Score = 29.3 bits (64), Expect = 7.8 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 10/91 (10%) Frame = -3 Query: 489 EDVEADEPDGRAGGASIDGEVDHE----------VADKVHGGANGEHDPGRRDLVDEPGE 340 E VEA +P+ A A IDG VD + V D++ G P + L+ + G+ Sbjct: 1144 ELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLIPLTKHLIVQRGD 1203 Query: 339 DAEVGAEVLEEGDGVERLLVVPQRRLERLGV 247 + G ++ DG LVVP LE GV Sbjct: 1204 NVMKGQQLT---DG----LVVPHEILEICGV 1227
>BFR2_YARLI (Q6C9G2) Protein BFR2| Length = 495 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = -3 Query: 534 DERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLV 355 D+ G+G DED E DE D +GE + + D+V + + G D+ Sbjct: 81 DDEDEDGDGADGFIDEDDEDDEEDDE------EGEGNGFIDDEVEVDEEDQDEDGDEDME 134 Query: 354 DEPGED 337 DE ED Sbjct: 135 DEQDED 140
>EDD1_HUMAN (O95071) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) (hHYD) (Progestin-induced protein) Length = 2799 Score = 29.3 bits (64), Expect = 7.8 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 501 VGAD-EDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRDLVDEPGEDAEV 328 V AD E+VE E + GE DH + HG N E + G+ D DE G D E+ Sbjct: 1565 VSADVEEVEVVE--------GVAGEEDHHDEQEEHGEENAEAE-GQHDEHDEDGSDMEL 1614
>Y745_HELPY (O25441) Hypothetical RNA pseudouridine synthase HP0745 (EC| 5.4.99.-) (RNA-uridine isomerase) (RNA pseudouridylate synthase) Length = 327 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -1 Query: 338 TPRLAPRSLKKEMVLSVCWLYPSDDLSVL 252 TP++ P+ LKKE+ L + ++ +DL VL Sbjct: 62 TPKITPKPLKKELDLEIEVIFEDEDLLVL 90
>Y745_HELPJ (Q9ZL98) Hypothetical RNA pseudouridine synthase jhp_0682 (EC| 5.4.99.-) (RNA-uridine isomerase) (RNA pseudouridylate synthase) Length = 327 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -1 Query: 338 TPRLAPRSLKKEMVLSVCWLYPSDDLSVL 252 TP++ P+ LKKE+ L + ++ +DL VL Sbjct: 62 TPKIVPKPLKKELDLEIEVIFEDEDLLVL 90
>KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C| Length = 1100 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 389 MASTTQGGVTSLMSPEKTPRLAPRSLKKEMVLSVCWLYPSDD 264 +A GG + SP+KTP L +L ++ ++S C LY D Sbjct: 481 VAVREDGGTVGVFSPKKTPHLV--NLNEDPLMSECLLYHIKD 520
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/81 (25%), Positives = 27/81 (33%) Frame = -3 Query: 540 AGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRD 361 AGD G G R D DG+ G DG+ + AD G + P Sbjct: 113 AGDRADGQPAGDRAAGQP--AGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDR 170 Query: 360 LVDEPGEDAEVGAEVLEEGDG 298 +P D G + DG Sbjct: 171 AAGQPAGDRAAGQPAGDRADG 191
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 389 MASTTQGGVTSLMSPEKTPRLAPRSLKKEMVLSVCWLYPSDD 264 +A GG + SP+KTP L +L ++ ++S C LY D Sbjct: 481 VAVREDGGTVGVFSPKKTPHLV--NLNEDPLMSECLLYHIKD 520
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/81 (25%), Positives = 27/81 (33%) Frame = -3 Query: 540 AGDERAGVGEGLRVGADEDVEADEPDGRAGGASIDGEVDHEVADKVHGGANGEHDPGRRD 361 AGD G G R D DG+ G DG+ + AD G + P Sbjct: 88 AGDRADGQPAGDRAAGQP--AGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDR 145 Query: 360 LVDEPGEDAEVGAEVLEEGDG 298 +P D G + DG Sbjct: 146 AAGQPAGDRAAGQPAGDRADG 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,405,736 Number of Sequences: 219361 Number of extensions: 968042 Number of successful extensions: 4156 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3882 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4132 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
