Clone Name | bart29b05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KATAM_ARATH (Q7XJ98) Xyloglucan galactosyltransferase KATAMARI 1... | 29 | 0.71 | 2 | CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protei... | 32 | 1.8 |
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>KATAM_ARATH (Q7XJ98) Xyloglucan galactosyltransferase KATAMARI 1 (EC 2.4.1.-)| (MURUS3 protein) Length = 619 Score = 28.9 bits (63), Expect(2) = 0.71 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = +2 Query: 260 EDDPVGRLKVYVYELPTKYNKKMVAKDSRCLS 355 + DP G +YV+ LP+K+N+ M+ +D + LS Sbjct: 147 KSDPCGGKYIYVHNLPSKFNEDML-RDCKKLS 177 Score = 22.7 bits (47), Expect(2) = 0.71 Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 6/83 (7%) Frame = +3 Query: 363 FAAEIFMHRFLLSSAIRTMNPEEADWFYTPVYTTCDLTP--WGHPLPFKSPRIMRSAVQF 536 FA ++ + T + A + P Y D+ WG+ + R A Sbjct: 213 FAVDVIFSNRMKQYKCLTNDSSLAAAIFVPFYAGFDIARYLWGYNIS------RRDAASL 266 Query: 537 ISSHW----PYWNRTAGADHFFV 593 W P W+ G DHF V Sbjct: 267 ELVDWLMKRPEWDIMRGKDHFLV 289
>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)| Length = 1403 Score = 31.6 bits (70), Expect = 1.8 Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Frame = -1 Query: 533 LNCTPHDPRRLEGQRMAPRSKVTGGVHRSVEPVGLLRVHGPDRARQQEPVHEYL----GG 366 + TP P + M K +GG E G L+ H +QEP Y G Sbjct: 778 IGVTPFQPTGGAFKSMPISPKGSGG---KPEDAGSLQAHIKQEDIKQEPPSPYKLNNGSG 834 Query: 365 KTCG*GTWSPWPPSSCCTWWAARRRTPSAS----RQDHPPAHHQH 243 G G S PP+S P+A+ +Q H P HH H Sbjct: 835 SASGGGVVSAPPPNSGSVGAIFNFNVPTATALSQKQFHYPMHHPH 879 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,226,835 Number of Sequences: 219361 Number of extensions: 1406365 Number of successful extensions: 4144 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4140 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)