ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_463682.1| Oryza sativa (japonica cultivar-group), predic... 301 1e-78
2dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 256 7e-65
4dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 256 7e-65
5dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 256 7e-65
6gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome... 202 9e-49
7gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare str... 202 9e-49
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 202 9e-49
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 202 9e-49
10ref|NM_195174.1| Oryza sativa (japonica cultivar-group) unknown ... 192 9e-46
11dbj|AK070803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 9e-46
12dbj|AB080694.1| Oryza sativa (japonica cultivar-group) OsGUT1 mR... 192 9e-46
13ref|XM_463683.1| Oryza sativa (japonica cultivar-group), predic... 119 1e-23
14gb|AY596523.1| Saccharum officinarum clone SCQGLR1019H07, comple... 119 1e-23
15dbj|AK109393.2| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
16gb|AY108460.1| Zea mays PCO105471 mRNA sequence 68 4e-08
17ref|XM_463681.1| Oryza sativa (japonica cultivar-group), predic... 64 6e-07
18dbj|AK073976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
19dbj|AK072752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
20dbj|AK063916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
21ref|XM_472344.1| Oryza sativa (japonica cultivar-group), predic... 60 9e-06
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
23dbj|AK107473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
24dbj|AK073335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
25emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 60 9e-06
26ref|NM_102508.2| Arabidopsis thaliana catalytic AT1G27440 mRNA, ... 54 5e-04
27gb|BT025555.1| Arabidopsis thaliana At1g27440 mRNA, complete cds 54 5e-04
28emb|BX814611.1|CNS0ADM0 Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
29gb|BT022053.1| Arabidopsis thaliana At1g27440 gene, complete cds 54 5e-04
30gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana... 54 5e-04
31ref|XM_483738.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
32ref|XM_483737.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
33gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 46 0.13
34gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, co... 46 0.13
35gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop... 46 0.13
36dbj|BS000664.2| Pan troglodytes chromosome Y clone: PTBY-007G10,... 46 0.13
37gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 46 0.13
38gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chrom... 46 0.13
39dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
40dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
41dbj|AK099715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
42dbj|AK106793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
43ref|NM_196531.1| Oryza sativa (japonica cultivar-group) unknown ... 44 0.52
44ref|XM_368410.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 44 0.52
45gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Can... 44 0.52
46gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Canc... 44 0.52
47gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) ch... 44 0.52
48dbj|AK110922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
49ref|NM_125578.2| Arabidopsis thaliana catalytic AT5G61840 mRNA, ... 42 2.0
50gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 2.0
51emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, co... 42 2.0
52emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial... 42 2.0
53gb|AY066039.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, com... 42 2.0
54gb|AY054180.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, com... 42 2.0
55emb|BX831082.1|CNS0A0UL Arabidopsis thaliana Full-length cDNA Co... 42 2.0
56gb|AY087390.1| Arabidopsis thaliana clone 34861 mRNA, complete s... 42 2.0
57gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.0
58emb|BX005260.12| Zebrafish DNA sequence from clone DKEY-209F7 in... 42 2.0
59dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.0
60ref|XM_469573.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
61ref|XM_479162.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
62ref|XM_472341.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
63gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.1
64ref|XM_366769.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 8.1
65ref|XM_368949.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 8.1
66ref|XM_414217.1| PREDICTED: Gallus gallus similar to Growth-arre... 40 8.1
67gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.1
68gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
69ref|XM_846009.1| PREDICTED: Canis familiaris hypothetical protei... 40 8.1
70emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete ch... 40 8.1
71emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.1
72emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 8.1
73emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.1
74dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.1
75dbj|AK145297.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 40 8.1
76gb|BC070471.1| Mus musculus coiled-coil domain containing 66, mR... 40 8.1
77ref|NM_177111.2| Mus musculus coiled-coil domain containing 66 (... 40 8.1
78dbj|AK170006.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.1
79gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.1
80gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosom... 40 8.1
81emb|BX932390.2| Gallus gallus finished cDNA, clone ChEST97n24 40 8.1
82dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
83dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
84dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 8.1
85gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosom... 40 8.1
86gb|AE004880.1| Pseudomonas aeruginosa PAO1, section 441 of 529 o... 40 8.1
87gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 40 8.1
88gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) gen... 40 8.1
89dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.1
90dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, c... 40 8.1
91dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
92dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
93emb|X82151.1|CCPAX6DNA C.coturnix Pax-QNR gene 40 8.1
94dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
95dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
96gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.1
97gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.1
98gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.1
99emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chro... 40 8.1
100emb|AL606921.6| Mouse DNA sequence from clone RP23-209C6 on chro... 40 8.1

>ref|XM_463682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score =  301 bits (152), Expect = 1e-78
 Identities = 309/360 (85%), Gaps = 1/360 (0%)
 Strand = Plus / Plus

                                                                       
Query: 211 cagggcccaggacaccgagaggatcgaagggagtgctggtgatgtgctggaggatgatcc 270
           ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 75  caggggccaggacaccgagaggatcgaagggagtgcgggtgatgtgctggaagatgaccc 134

                                                                       
Query: 271 tgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggt 330
           |||||||||||| |||||||| ||||||||| ||||||| || |||||||||||||||||
Sbjct: 135 tgtcgggaggcttaaggtgtatgtctacgagttgcccactaaatacaacaagaagatggt 194

                                                                       
Query: 331 ggccaaggactccaggtgcctcagccacatgttttgccgccgagatattcatgcaccggt 390
           ||| || || ||||| ||||||||||||||| ||||| || ||||| |||||||| || |
Sbjct: 195 ggcaaaagattccagatgcctcagccacatg-tttgctgcagagattttcatgcatcgat 253

                                                                       
Query: 391 tcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactc 450
           ||||  |||| || |||||||||||  | || |||||||| || || |||||||| ||||
Sbjct: 254 tcctcttgtcaagtgcgatccggactttaaatccggaggaagctgattggttctatactc 313

                                                                       
Query: 451 cggtgtacaccacctgtgaccttactccgtggggccatccgttgcccttcaagtctccgc 510
           | || ||||| || || || |||||||| ||||| ||||| |||||||||||||||||  
Sbjct: 314 cagtatacacgacgtgcgatcttactccatggggtcatcccttgcccttcaagtctccaa 373

                                                                       
Query: 511 ggatcatgaggagtgcagttcagtttatctcatcacactggccctattggaaccggacag 570
           |||| ||||| |||||| ||||||| || || || || ||||||||||||||| ||||||
Sbjct: 374 ggattatgagaagtgcaattcagttcatttcctcgcattggccctattggaacaggacag 433



to top

>dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C14, full
           insert sequence
          Length = 1739

 Score =  301 bits (152), Expect = 1e-78
 Identities = 309/360 (85%), Gaps = 1/360 (0%)
 Strand = Plus / Plus

                                                                       
Query: 211 cagggcccaggacaccgagaggatcgaagggagtgctggtgatgtgctggaggatgatcc 270
           ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 215 caggggccaggacaccgagaggatcgaagggagtgcgggtgatgtgctggaagatgaccc 274

                                                                       
Query: 271 tgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaagatggt 330
           |||||||||||| |||||||| ||||||||| ||||||| || |||||||||||||||||
Sbjct: 275 tgtcgggaggcttaaggtgtatgtctacgagttgcccactaaatacaacaagaagatggt 334

                                                                       
Query: 331 ggccaaggactccaggtgcctcagccacatgttttgccgccgagatattcatgcaccggt 390
           ||| || || ||||| ||||||||||||||| ||||| || ||||| |||||||| || |
Sbjct: 335 ggcaaaagattccagatgcctcagccacatg-tttgctgcagagattttcatgcatcgat 393

                                                                       
Query: 391 tcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttctacactc 450
           ||||  |||| || |||||||||||  | || |||||||| || || |||||||| ||||
Sbjct: 394 tcctcttgtcaagtgcgatccggactttaaatccggaggaagctgattggttctatactc 453

                                                                       
Query: 451 cggtgtacaccacctgtgaccttactccgtggggccatccgttgcccttcaagtctccgc 510
           | || ||||| || || || |||||||| ||||| ||||| |||||||||||||||||  
Sbjct: 454 cagtatacacgacgtgcgatcttactccatggggtcatcccttgcccttcaagtctccaa 513

                                                                       
Query: 511 ggatcatgaggagtgcagttcagtttatctcatcacactggccctattggaaccggacag 570
           |||| ||||| |||||| ||||||| || || || || ||||||||||||||| ||||||
Sbjct: 514 ggattatgagaagtgcaattcagttcatttcctcgcattggccctattggaacaggacag 573



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  256 bits (129), Expect = 7e-65
 Identities = 283/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Minus

                                                                            
Query: 238      agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
                ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 40620568 agggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtcta 40620509

                                                                            
Query: 298      cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
                |||| ||||||| || |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 40620508 cgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagcca 40620449

                                                                            
Query: 358      catgttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggacca 417
                |||| ||||| || ||||| |||||||| || |||||  |||| || |||||||||||  
Sbjct: 40620448 catg-tttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggactt 40620390

                                                                            
Query: 418      tgaacccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactc 477
                | || |||||||| || || |||||||| ||||| || ||||| || || || |||||||
Sbjct: 40620389 taaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactc 40620330

                                                                            
Query: 478      cgtggggccatccgttgcccttcaagtctccgcggatcatgaggagtgcagttcagttta 537
                | ||||| ||||| |||||||||||||||||  |||| ||||| |||||| ||||||| |
Sbjct: 40620329 catggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttca 40620270

                                                 
Query: 538      tctcatcacactggccctattggaaccggacag 570
                | || || || ||||||||||||||| ||||||
Sbjct: 40620269 tttcctcgcattggccctattggaacaggacag 40620237



 Score =  113 bits (57), Expect = 7e-22
 Identities = 211/261 (80%), Gaps = 1/261 (0%)
 Strand = Plus / Minus

                                                                            
Query: 242      agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
                ||||||||||||||| |||| ||||| ||||| |||||||| ||||| || ||||| || 
Sbjct: 40627420 agtgctggtgatgtgttggaagatgaccctgttgggaggcttaaggtctatgtctatgat 40627361

                                                                            
Query: 302      ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
                || || | |||||||||||||||| || ||   |||||  | |||||||| | |||||||
Sbjct: 40627360 ctcccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatg 40627301

                                                                            
Query: 362      ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
                ||| ||||| ||||| |||||||| ||||||||| |||| |||||  |||| ||  | ||
Sbjct: 40627300 ttt-gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaa 40627242

                                                                            
Query: 422      cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
                 || ||||| || || ||||||||||| ||||||||||| || || ||||| ||||| | 
Sbjct: 40627241 tcccgaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctc 40627182

                                     
Query: 482      gggccatccgttgcccttcaa 502
                 || | ||| |||||||||||
Sbjct: 40627181 cggtcttcccttgcccttcaa 40627161



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 421      acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
                |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 40609294 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 40609243



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 211      cagggcccaggacaccgagaggatcgaagg 240
                ||||| ||||||||||||||||||||||||
Sbjct: 40621614 caggggccaggacaccgagaggatcgaagg 40621585



to top

>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score =  256 bits (129), Expect = 7e-65
 Identities = 283/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Minus

                                                                         
Query: 238   agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
             ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 62546 agggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtcta 62487

                                                                         
Query: 298   cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
             |||| ||||||| || |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 62486 cgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagcca 62427

                                                                         
Query: 358   catgttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggacca 417
             |||| ||||| || ||||| |||||||| || |||||  |||| || |||||||||||  
Sbjct: 62426 catg-tttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggactt 62368

                                                                         
Query: 418   tgaacccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactc 477
             | || |||||||| || || |||||||| ||||| || ||||| || || || |||||||
Sbjct: 62367 taaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactc 62308

                                                                         
Query: 478   cgtggggccatccgttgcccttcaagtctccgcggatcatgaggagtgcagttcagttta 537
             | ||||| ||||| |||||||||||||||||  |||| ||||| |||||| ||||||| |
Sbjct: 62307 catggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttca 62248

                                              
Query: 538   tctcatcacactggccctattggaaccggacag 570
             | || || || ||||||||||||||| ||||||
Sbjct: 62247 tttcctcgcattggccctattggaacaggacag 62215



 Score =  113 bits (57), Expect = 7e-22
 Identities = 211/261 (80%), Gaps = 1/261 (0%)
 Strand = Plus / Minus

                                                                         
Query: 242   agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
             ||||||||||||||| |||| ||||| ||||| |||||||| ||||| || ||||| || 
Sbjct: 69398 agtgctggtgatgtgttggaagatgaccctgttgggaggcttaaggtctatgtctatgat 69339

                                                                         
Query: 302   ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
             || || | |||||||||||||||| || ||   |||||  | |||||||| | |||||||
Sbjct: 69338 ctcccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatg 69279

                                                                         
Query: 362   ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
             ||| ||||| ||||| |||||||| ||||||||| |||| |||||  |||| ||  | ||
Sbjct: 69278 ttt-gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaa 69220

                                                                         
Query: 422   cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
              || ||||| || || ||||||||||| ||||||||||| || || ||||| ||||| | 
Sbjct: 69219 tcccgaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctc 69160

                                  
Query: 482   gggccatccgttgcccttcaa 502
              || | ||| |||||||||||
Sbjct: 69159 cggtcttcccttgcccttcaa 69139



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 421   acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
             |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 51272 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 51221



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 211   cagggcccaggacaccgagaggatcgaagg 240
             ||||| ||||||||||||||||||||||||
Sbjct: 63592 caggggccaggacaccgagaggatcgaagg 63563



to top

>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0482D04
          Length = 144583

 Score =  256 bits (129), Expect = 7e-65
 Identities = 283/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Minus

                                                                          
Query: 238    agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
              ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||
Sbjct: 100583 agggagtgcgggtgatgtgctggaagatgaccctgtcgggaggcttaaggtgtatgtcta 100524

                                                                          
Query: 298    cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
              |||| ||||||| || |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 100523 cgagttgcccactaaatacaacaagaagatggtggcaaaagattccagatgcctcagcca 100464

                                                                          
Query: 358    catgttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggacca 417
              |||| ||||| || ||||| |||||||| || |||||  |||| || |||||||||||  
Sbjct: 100463 catg-tttgctgcagagattttcatgcatcgattcctcttgtcaagtgcgatccggactt 100405

                                                                          
Query: 418    tgaacccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactc 477
              | || |||||||| || || |||||||| ||||| || ||||| || || || |||||||
Sbjct: 100404 taaatccggaggaagctgattggttctatactccagtatacacgacgtgcgatcttactc 100345

                                                                          
Query: 478    cgtggggccatccgttgcccttcaagtctccgcggatcatgaggagtgcagttcagttta 537
              | ||||| ||||| |||||||||||||||||  |||| ||||| |||||| ||||||| |
Sbjct: 100344 catggggtcatcccttgcccttcaagtctccaaggattatgagaagtgcaattcagttca 100285

                                               
Query: 538    tctcatcacactggccctattggaaccggacag 570
              | || || || ||||||||||||||| ||||||
Sbjct: 100284 tttcctcgcattggccctattggaacaggacag 100252



 Score =  113 bits (57), Expect = 7e-22
 Identities = 211/261 (80%), Gaps = 1/261 (0%)
 Strand = Plus / Minus

                                                                          
Query: 242    agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
              ||||||||||||||| |||| ||||| ||||| |||||||| ||||| || ||||| || 
Sbjct: 107435 agtgctggtgatgtgttggaagatgaccctgttgggaggcttaaggtctatgtctatgat 107376

                                                                          
Query: 302    ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
              || || | |||||||||||||||| || ||   |||||  | |||||||| | |||||||
Sbjct: 107375 ctcccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatg 107316

                                                                          
Query: 362    ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
              ||| ||||| ||||| |||||||| ||||||||| |||| |||||  |||| ||  | ||
Sbjct: 107315 ttt-gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaa 107257

                                                                          
Query: 422    cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
               || ||||| || || ||||||||||| ||||||||||| || || ||||| ||||| | 
Sbjct: 107256 tcccgaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctc 107197

                                   
Query: 482    gggccatccgttgcccttcaa 502
               || | ||| |||||||||||
Sbjct: 107196 cggtcttcccttgcccttcaa 107176



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 421   acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
             |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 89309 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 89258



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 211    cagggcccaggacaccgagaggatcgaagg 240
              ||||| ||||||||||||||||||||||||
Sbjct: 101629 caggggccaggacaccgagaggatcgaagg 101600



to top

>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0095J15, complete sequence
          Length = 156023

 Score =  202 bits (102), Expect = 9e-49
 Identities = 214/249 (85%), Gaps = 3/249 (1%)
 Strand = Plus / Minus

                                                                         
Query: 244   tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
             ||||||||||||||| |||  || |||||||| || | |||||||||||| |||||||||
Sbjct: 11869 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 11810

                                                                         
Query: 302   ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
             |||||| |||||||||||||||| || ||||| || || ||||| |||||||||||||||
Sbjct: 11809 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 11750

                                                                         
Query: 362   ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
              |||||| | ||||| |||||||| || |||||||||||||| |||||||||||   |||
Sbjct: 11749 -tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaa 11691

                                                                         
Query: 422   cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
              ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||
Sbjct: 11690 tccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatg 11631

                      
Query: 482   gggccatcc 490
             |||||||||
Sbjct: 11630 gggccatcc 11622



to top

>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0047G15, from chromosome 10, complete sequence
          Length = 166474

 Score =  202 bits (102), Expect = 9e-49
 Identities = 214/249 (85%), Gaps = 3/249 (1%)
 Strand = Plus / Minus

                                                                          
Query: 244    tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
              ||||||||||||||| |||  || |||||||| || | |||||||||||| |||||||||
Sbjct: 145399 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 145340

                                                                          
Query: 302    ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
              |||||| |||||||||||||||| || ||||| || || ||||| |||||||||||||||
Sbjct: 145339 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 145280

                                                                          
Query: 362    ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
               |||||| | ||||| |||||||| || |||||||||||||| |||||||||||   |||
Sbjct: 145279 -tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaa 145221

                                                                          
Query: 422    cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
               ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||
Sbjct: 145220 tccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatg 145161

                       
Query: 482    gggccatcc 490
              |||||||||
Sbjct: 145160 gggccatcc 145152



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  202 bits (102), Expect = 9e-49
 Identities = 214/249 (85%), Gaps = 3/249 (1%)
 Strand = Plus / Minus

                                                                           
Query: 244     tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
               ||||||||||||||| |||  || |||||||| || | |||||||||||| |||||||||
Sbjct: 5140098 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 5140039

                                                                           
Query: 302     ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
               |||||| |||||||||||||||| || ||||| || || ||||| |||||||||||||||
Sbjct: 5140038 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 5139979

                                                                           
Query: 362     ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
                |||||| | ||||| |||||||| || |||||||||||||| |||||||||||   |||
Sbjct: 5139978 -tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaa 5139920

                                                                           
Query: 422     cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
                ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||
Sbjct: 5139919 tccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatg 5139860

                        
Query: 482     gggccatcc 490
               |||||||||
Sbjct: 5139859 gggccatcc 5139851



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 127      ggcggcggcgatggggaagccg 148
                ||||||||||||||||||||||
Sbjct: 14271127 ggcggcggcgatggggaagccg 14271148



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  202 bits (102), Expect = 9e-49
 Identities = 214/249 (85%), Gaps = 3/249 (1%)
 Strand = Plus / Minus

                                                                           
Query: 244     tgctggtgatgtgctggag--gatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
               ||||||||||||||| |||  || |||||||| || | |||||||||||| |||||||||
Sbjct: 5140885 tgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgag 5140826

                                                                           
Query: 302     ctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagccacatg 361
               |||||| |||||||||||||||| || ||||| || || ||||| |||||||||||||||
Sbjct: 5140825 ctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatg 5140766

                                                                           
Query: 362     ttttgccgccgagatattcatgcaccggttcctgctgtcgagcgcgatccggaccatgaa 421
                |||||| | ||||| |||||||| || |||||||||||||| |||||||||||   |||
Sbjct: 5140765 -tttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaa 5140707

                                                                           
Query: 422     cccggaggaggccgactggttctacactccggtgtacaccacctgtgaccttactccgtg 481
                ||||| || ||||| |||||||||||||| ||||||||||| || ||||| || || ||
Sbjct: 5140706 tccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatg 5140647

                        
Query: 482     gggccatcc 490
               |||||||||
Sbjct: 5140646 gggccatcc 5140638



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 127      ggcggcggcgatggggaagccg 148
                ||||||||||||||||||||||
Sbjct: 14279369 ggcggcggcgatggggaagccg 14279390



to top

>ref|NM_195174.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0047G15.26), mRNA
          Length = 1206

 Score =  192 bits (97), Expect = 9e-46
 Identities = 194/225 (86%), Gaps = 1/225 (0%)
 Strand = Plus / Plus

                                                                       
Query: 266 gatcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 325
           |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| 
Sbjct: 88  gatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaac 147

                                                                       
Query: 326 atggtggccaaggactccaggtgcctcagccacatgttttgccgccgagatattcatgca 385
           || ||||| || || ||||| ||||||||||||||| |||||| | ||||| ||||||||
Sbjct: 148 attgtggcgaaagattccagatgcctcagccacatg-tttgccacagagatcttcatgca 206

                                                                       
Query: 386 ccggttcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttcta 445
            || |||||||||||||| |||||||||||   ||| ||||| || ||||| ||||||||
Sbjct: 207 tcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttcta 266

                                                        
Query: 446 cactccggtgtacaccacctgtgaccttactccgtggggccatcc 490
           |||||| ||||||||||| || ||||| || || |||||||||||
Sbjct: 267 cactccagtgtacaccacatgcgacctcacgccatggggccatcc 311



to top

>dbj|AK070803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069D21, full
           insert sequence
          Length = 1744

 Score =  192 bits (97), Expect = 9e-46
 Identities = 194/225 (86%), Gaps = 1/225 (0%)
 Strand = Plus / Plus

                                                                       
Query: 266 gatcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 325
           |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| 
Sbjct: 283 gatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaac 342

                                                                       
Query: 326 atggtggccaaggactccaggtgcctcagccacatgttttgccgccgagatattcatgca 385
           || ||||| || || ||||| ||||||||||||||| |||||| | ||||| ||||||||
Sbjct: 343 attgtggcgaaagattccagatgcctcagccacatg-tttgccacagagatcttcatgca 401

                                                                       
Query: 386 ccggttcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttcta 445
            || |||||||||||||| |||||||||||   ||| ||||| || ||||| ||||||||
Sbjct: 402 tcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttcta 461

                                                        
Query: 446 cactccggtgtacaccacctgtgaccttactccgtggggccatcc 490
           |||||| ||||||||||| || ||||| || || |||||||||||
Sbjct: 462 cactccagtgtacaccacatgcgacctcacgccatggggccatcc 506



to top

>dbj|AB080694.1| Oryza sativa (japonica cultivar-group) OsGUT1 mRNA for NpGUT1
           homolog, complete cds
          Length = 1206

 Score =  192 bits (97), Expect = 9e-46
 Identities = 194/225 (86%), Gaps = 1/225 (0%)
 Strand = Plus / Plus

                                                                       
Query: 266 gatcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 325
           |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| 
Sbjct: 88  gatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaac 147

                                                                       
Query: 326 atggtggccaaggactccaggtgcctcagccacatgttttgccgccgagatattcatgca 385
           || ||||| || || ||||| ||||||||||||||| |||||| | ||||| ||||||||
Sbjct: 148 attgtggcgaaagattccagatgcctcagccacatg-tttgccacagagatcttcatgca 206

                                                                       
Query: 386 ccggttcctgctgtcgagcgcgatccggaccatgaacccggaggaggccgactggttcta 445
            || |||||||||||||| |||||||||||   ||| ||||| || ||||| ||||||||
Sbjct: 207 tcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttcta 266

                                                        
Query: 446 cactccggtgtacaccacctgtgaccttactccgtggggccatcc 490
           |||||| ||||||||||| || ||||| || || |||||||||||
Sbjct: 267 cactccagtgtacaccacatgcgacctcacgccatggggccatcc 311



to top

>ref|XM_463683.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1254

 Score =  119 bits (60), Expect = 1e-23
 Identities = 205/252 (81%), Gaps = 1/252 (0%)
 Strand = Plus / Plus

                                                                       
Query: 227 gagaggatcgaagggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaag 286
           |||||||||  ||| ||||||||||||||| |||| ||||| ||||| |||||||| |||
Sbjct: 97  gagaggatctcaggaagtgctggtgatgtgttggaagatgaccctgttgggaggcttaag 156

                                                                       
Query: 287 gtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggccaaggactccagg 346
           || || ||||| || || || | |||||||||||||||| || ||   |||||  | |||
Sbjct: 157 gtctatgtctatgatctcccaagcaagtacaacaagaagctgctgaagaaggatcctagg 216

                                                                       
Query: 347 tgcctcagccacatgttttgccgccgagatattcatgcaccggttcctgctgtcgagcgc 406
           ||||| | ||||||| |||||||| ||||| |||||||| ||||||||| |||| |||||
Sbjct: 217 tgcctgaaccacatg-tttgccgctgagattttcatgcatcggttcctgttgtcaagcgc 275

                                                                       
Query: 407 gatccggaccatgaacccggaggaggccgactggttctacactccggtgtacaccacctg 466
             |||| ||  | || || ||||| || || ||||||||||| ||||||||||| || ||
Sbjct: 276 tgtccgaacttttaatcccgaggaagctgattggttctacacaccggtgtacactacatg 335

                       
Query: 467 tgaccttactcc 478
            ||||| |||||
Sbjct: 336 cgacctgactcc 347



to top

>gb|AY596523.1| Saccharum officinarum clone SCQGLR1019H07, complete sequence
          Length = 1928

 Score =  119 bits (60), Expect = 1e-23
 Identities = 205/252 (81%), Gaps = 1/252 (0%)
 Strand = Plus / Plus

                                                                       
Query: 227 gagaggatcgaagggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaag 286
           |||||||||  ||||||||||||||| ||| | || ||| | ||||| |||||||| |||
Sbjct: 498 gagaggatctcagggagtgctggtgacgtgttagaagataaccctgttgggaggctcaag 557

                                                                       
Query: 287 gtgtacgtctacgagctgcccaccaagtacaacaagaagatggtggccaaggactccagg 346
           || |||||||| || || ||||  || |||||||||||| || ||   |||||  | |||
Sbjct: 558 gtttacgtctatgatctccccagtaaatacaacaagaagctgctgaagaaggatcctagg 617

                                                                       
Query: 347 tgcctcagccacatgttttgccgccgagatattcatgcaccggttcctgctgtcgagcgc 406
           ||||||| ||||||| ||||| || ||||| |||||||||||||||||| ||||||||||
Sbjct: 618 tgcctcaaccacatg-tttgctgcggagatcttcatgcaccggttcctgttgtcgagcgc 676

                                                                       
Query: 407 gatccggaccatgaacccggaggaggccgactggttctacactccggtgtacaccacctg 466
             |||| ||  | || ||||| || || || ||||||||||| || ||||||||||| ||
Sbjct: 677 tgtccgaacttttaatccggaagaagcggattggttctacacgcccgtgtacaccacatg 736

                       
Query: 467 tgaccttactcc 478
           ||| || |||||
Sbjct: 737 tgatctgactcc 748



to top

>dbj|AK109393.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A02, full
           insert sequence
          Length = 1379

 Score =  119 bits (60), Expect = 1e-23
 Identities = 124/144 (86%), Gaps = 1/144 (0%)
 Strand = Plus / Plus

                                                                       
Query: 347 tgcctcagccacatgttttgccgccgagatattcatgcaccggttcctgctgtcgagcgc 406
           |||||||||||||||||| ||| | ||||| |||||||| || |||||||||||||| ||
Sbjct: 5   tgcctcagccacatgttt-gccacagagatcttcatgcatcgcttcctgctgtcgagtgc 63

                                                                       
Query: 407 gatccggaccatgaacccggaggaggccgactggttctacactccggtgtacaccacctg 466
           |||||||||   ||| ||||| || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 64  gatccggacttcgaatccggacgaagccgattggttctacactccagtgtacaccacatg 123

                                   
Query: 467 tgaccttactccgtggggccatcc 490
            ||||| || || |||||||||||
Sbjct: 124 cgacctcacgccatggggccatcc 147



to top

>gb|AY108460.1| Zea mays PCO105471 mRNA sequence
          Length = 598

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                       
Query: 208 cgtcagggcccaggacaccgagaggatcgaagggagtgctggtgatgtgctggaggatga 267
           ||||| ||| ||||| |||||| |||||||||| || |||||||||||| | || ||| |
Sbjct: 384 cgtcacggcgcaggagaccgagcggatcgaaggaagcgctggtgatgtgttagaagataa 443

                                                                     
Query: 268 tcctgtcgggaggctgaaggtgtacgtctacgagctgcccaccaagtacaacaagaag 325
            ||||| |||||||| ||||| |  ||||| || || |||| ||| ||||||||||||
Sbjct: 444 ccctgttgggaggctcaaggtctttgtctatgatctccccagcaaatacaacaagaag 501



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 363 tttgccgccgagatattcatgcaccggttcctgctgtc 400
           |||||||||||||| ||||||||| |||||||| ||||
Sbjct: 538 tttgccgccgagatcttcatgcacaggttcctgttgtc 575



to top

>ref|XM_463681.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 421 acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
           |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 305 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 356



to top

>dbj|AK073976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076M19, full
           insert sequence
          Length = 1853

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 421 acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
           |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 648 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 699



to top

>dbj|AK072752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139D17, full
           insert sequence
          Length = 1244

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 421 acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
           |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 13  acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 64



to top

>dbj|AK063916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B02, full
           insert sequence
          Length = 1621

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 421 acccggaggaggccgactggttctacactccggtgtacaccacctgtgacct 472
           |||||||||||||||||||||||||||| || |  ||||||||||| |||||
Sbjct: 410 acccggaggaggccgactggttctacacacccgcctacaccacctgcgacct 461



to top

>ref|XM_472344.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1263

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 133/166 (80%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                       
Query: 238 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
           ||||||||| || |||||||| || ||  ||||||| |||||| ||||||| | | ||||
Sbjct: 117 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 176

                                                                       
Query: 298 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
            || || || |  ||||||||||||||||||||   ||||||  || |||||||||  ||
Sbjct: 177 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 236

                                                         
Query: 358 catgttttgccgccgagatattcatgcaccggttcctgctgtcgag 403
           |||| ||||| || || ||||||||||| || ||| |||| |||||
Sbjct: 237 catg-tttgctgcagaaatattcatgcatcgcttcttgctctcgag 281



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 133/166 (80%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                            
Query: 238      agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
                ||||||||| || |||||||| || ||  ||||||| |||||| ||||||| | | ||||
Sbjct: 19700243 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 19700302

                                                                            
Query: 298      cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
                 || || || |  ||||||||||||||||||||   ||||||  || |||||||||  ||
Sbjct: 19700303 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 19700362

                                                              
Query: 358      catgttttgccgccgagatattcatgcaccggttcctgctgtcgag 403
                |||| ||||| || || ||||||||||| || ||| |||| |||||
Sbjct: 19700363 catg-tttgctgcagaaatattcatgcatcgcttcttgctctcgag 19700407



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      gctgcgggtgggcggcggcg 136
                ||||||||||||||||||||
Sbjct: 19660809 gctgcgggtgggcggcggcg 19660790



to top

>dbj|AK107473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B06, full
           insert sequence
          Length = 2766

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 133/166 (80%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                       
Query: 238 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
           ||||||||| || |||||||| || ||  ||||||| |||||| ||||||| | | ||||
Sbjct: 306 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 365

                                                                       
Query: 298 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
            || || || |  ||||||||||||||||||||   ||||||  || |||||||||  ||
Sbjct: 366 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 425

                                                         
Query: 358 catgttttgccgccgagatattcatgcaccggttcctgctgtcgag 403
           |||| ||||| || || ||||||||||| || ||| |||| |||||
Sbjct: 426 catg-tttgctgcagaaatattcatgcatcgcttcttgctctcgag 470



to top

>dbj|AK073335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F13, full
           insert sequence
          Length = 1704

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 133/166 (80%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                       
Query: 238 agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
           ||||||||| || |||||||| || ||  ||||||| |||||| ||||||| | | ||||
Sbjct: 365 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 424

                                                                       
Query: 298 cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
            || || || |  ||||||||||||||||||||   ||||||  || |||||||||  ||
Sbjct: 425 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 484

                                                         
Query: 358 catgttttgccgccgagatattcatgcaccggttcctgctgtcgag 403
           |||| ||||| || || ||||||||||| || ||| |||| |||||
Sbjct: 485 catg-tttgctgcagaaatattcatgcatcgcttcttgctctcgag 529



to top

>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
              complete sequence
          Length = 166410

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 133/166 (80%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                          
Query: 238    agggagtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtcta 297
              ||||||||| || |||||||| || ||  ||||||| |||||| ||||||| | | ||||
Sbjct: 150969 agggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatcta 151028

                                                                          
Query: 298    cgagctgcccaccaagtacaacaagaagatggtggccaaggactccaggtgcctcagcca 357
               || || || |  ||||||||||||||||||||   ||||||  || |||||||||  ||
Sbjct: 151029 tgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatca 151088

                                                            
Query: 358    catgttttgccgccgagatattcatgcaccggttcctgctgtcgag 403
              |||| ||||| || || ||||||||||| || ||| |||| |||||
Sbjct: 151089 catg-tttgctgcagaaatattcatgcatcgcttcttgctctcgag 151133



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    gctgcgggtgggcggcggcg 136
              ||||||||||||||||||||
Sbjct: 111535 gctgcgggtgggcggcggcg 111516



to top

>ref|NM_102508.2| Arabidopsis thaliana catalytic AT1G27440 mRNA, complete cds
          Length = 1525

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 242 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
           ||||||||||||||  ||||||||||||| || || | ||| ||||| || || || |||
Sbjct: 259 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 318

                                  
Query: 302 ctgcccaccaagtacaacaagaa 324
           || || | |||||||||||||||
Sbjct: 319 cttccaagcaagtacaacaagaa 341



to top

>gb|BT025555.1| Arabidopsis thaliana At1g27440 mRNA, complete cds
          Length = 1239

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 242 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
           ||||||||||||||  ||||||||||||| || || | ||| ||||| || || || |||
Sbjct: 97  agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 156

                                  
Query: 302 ctgcccaccaagtacaacaagaa 324
           || || | |||||||||||||||
Sbjct: 157 cttccaagcaagtacaacaagaa 179



to top

>emb|BX814611.1|CNS0ADM0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZD11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1526

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 242 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
           ||||||||||||||  ||||||||||||| || || | ||| ||||| || || || |||
Sbjct: 259 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 318

                                  
Query: 302 ctgcccaccaagtacaacaagaa 324
           || || | |||||||||||||||
Sbjct: 319 cttccaagcaagtacaacaagaa 341



to top

>gb|BT022053.1| Arabidopsis thaliana At1g27440 gene, complete cds
          Length = 1424

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 242 agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
           ||||||||||||||  ||||||||||||| || || | ||| ||||| || || || |||
Sbjct: 214 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 273

                                  
Query: 302 ctgcccaccaagtacaacaagaa 324
           || || | |||||||||||||||
Sbjct: 274 cttccaagcaagtacaacaagaa 296



to top

>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I,
             complete sequence
          Length = 99690

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                         
Query: 242   agtgctggtgatgtgctggaggatgatcctgtcgggaggctgaaggtgtacgtctacgag 301
             ||||||||||||||  ||||||||||||| || || | ||| ||||| || || || |||
Sbjct: 74791 agtgctggtgatgttttggaggatgatccagtgggaaagcttaaggtttatgtatatgag 74732

                                    
Query: 302   ctgcccaccaagtacaacaagaa 324
             || || | |||||||||||||||
Sbjct: 74731 cttccaagcaagtacaacaagaa 74709



to top

>ref|XM_483738.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1775

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 167 gcggcggcgctcacgctgctcct 189
           |||||||||||||||||||||||
Sbjct: 747 gcggcggcgctcacgctgctcct 725



to top

>ref|XM_483737.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2606

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 167  gcggcggcgctcacgctgctcct 189
            |||||||||||||||||||||||
Sbjct: 1516 gcggcggcgctcacgctgctcct 1494



to top

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 157    gctcgccctcgcggcggcgctcacgctgctc 187
              ||||||| ||||||||||||| |||||||||
Sbjct: 221379 gctcgccgtcgcggcggcgctgacgctgctc 221409



to top

>gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, complete sequence
          Length = 175868

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 127    ggcggcggcgatggggaagccgcgggc 153
              |||||||||||||||| ||||||||||
Sbjct: 147913 ggcggcggcgatgggggagccgcgggc 147939



to top

>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
              biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 164    ctcgcggcggcgctcacgctgct 186
              |||||||||||||||||||||||
Sbjct: 114596 ctcgcggcggcgctcacgctgct 114618



to top

>dbj|BS000664.2| Pan troglodytes chromosome Y clone: PTBY-007G10, complete sequence
          Length = 89389

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 127   ggcggcggcgatggggaagccgcgggc 153
             |||||||||||||||| ||||||||||
Sbjct: 33567 ggcggcggcgatgggggagccgcgggc 33593



to top

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 127      ggcggcggcgatggggaagccgcgggc 153
                |||||||||||||||| ||||||||||
Sbjct: 13887816 ggcggcggcgatgggggagccgcgggc 13887790



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 127     ggcggcggcgatggggaagccgcgggc 153
               |||||||||||||||| ||||||||||
Sbjct: 4087084 ggcggcggcgatgggggagccgcgggc 4087058



to top

>gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chromosome y, complete
              sequence
          Length = 175351

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 127    ggcggcggcgatggggaagccgcgggc 153
              |||||||||||||||| ||||||||||
Sbjct: 166053 ggcggcggcgatgggggagccgcgggc 166079



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 167      gcggcggcgctcacgctgctcct 189
                |||||||||||||||||||||||
Sbjct: 27839301 gcggcggcgctcacgctgctcct 27839279



to top

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 167   gcggcggcgctcacgctgctcct 189
             |||||||||||||||||||||||
Sbjct: 47379 gcggcggcgctcacgctgctcct 47357



to top

>dbj|AK099715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013085B05, full
            insert sequence
          Length = 2606

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 167  gcggcggcgctcacgctgctcct 189
            |||||||||||||||||||||||
Sbjct: 1516 gcggcggcgctcacgctgctcct 1494



to top

>dbj|AK106793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A11, full
           insert sequence
          Length = 1775

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 167 gcggcggcgctcacgctgctcct 189
           |||||||||||||||||||||||
Sbjct: 747 gcggcggcgctcacgctgctcct 725



to top

>ref|NM_196531.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0053G13.5), mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 127 ggcggcggcgatggggaagccg 148
           ||||||||||||||||||||||
Sbjct: 183 ggcggcggcgatggggaagccg 204



to top

>ref|XM_368410.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00834.4) partial mRNA
          Length = 987

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 157 gctcgccctcgcggcggcgctc 178
           ||||||||||||||||||||||
Sbjct: 379 gctcgccctcgcggcggcgctc 358



to top

>gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199841

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 314    tacaacaagaagatggtggcca 335
              ||||||||||||||||||||||
Sbjct: 184328 tacaacaagaagatggtggcca 184349



to top

>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232339

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 314    tacaacaagaagatggtggcca 335
              ||||||||||||||||||||||
Sbjct: 161601 tacaacaagaagatggtggcca 161580



to top

>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13,
             complete sequence
          Length = 138245

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 127   ggcggcggcgatggggaagccg 148
             ||||||||||||||||||||||
Sbjct: 18402 ggcggcggcgatggggaagccg 18423



to top

>dbj|AK110922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D03, full
           insert sequence
          Length = 1551

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 127 ggcggcggcgatggggaagccg 148
           ||||||||||||||||||||||
Sbjct: 569 ggcggcggcgatggggaagccg 590



to top

>ref|NM_125578.2| Arabidopsis thaliana catalytic AT5G61840 mRNA, complete cds
          Length = 1672

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 242 agtgctggtgatgtgctggaggatgatcc 270
           ||||||||||||||| |||| ||||||||
Sbjct: 343 agtgctggtgatgtgttggaagatgatcc 371



to top

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 142    gaagccgcgggcgatgctcgccctcgcggcggcgctc 178
              ||||| ||||||||||| |||||||  ||||||||||
Sbjct: 428245 gaagctgcgggcgatgcgcgccctcaaggcggcgctc 428281



to top

>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             3/8
          Length = 347625

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 492   ttgcccttcaagtctccgcggatca 516
             ||||||| |||||||||||||||||
Sbjct: 75369 ttgccctgcaagtctccgcggatca 75393



to top

>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ
             gene, spiK gene, spiL gene and spiZ gene
          Length = 48000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   cgccctcgcggcggcgctcac 180
             |||||||||||||||||||||
Sbjct: 10607 cgccctcgcggcggcgctcac 10627



to top

>gb|AY066039.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds
          Length = 1248

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 242 agtgctggtgatgtgctggaggatgatcc 270
           ||||||||||||||| |||| ||||||||
Sbjct: 106 agtgctggtgatgtgttggaagatgatcc 134



to top

>gb|AY054180.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds
          Length = 1664

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 242 agtgctggtgatgtgctggaggatgatcc 270
           ||||||||||||||| |||| ||||||||
Sbjct: 337 agtgctggtgatgtgttggaagatgatcc 365



to top

>emb|BX831082.1|CNS0A0UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZD10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1651

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 242 agtgctggtgatgtgctggaggatgatcc 270
           ||||||||||||||| |||| ||||||||
Sbjct: 323 agtgctggtgatgtgttggaagatgatcc 351



to top

>gb|AY087390.1| Arabidopsis thaliana clone 34861 mRNA, complete sequence
          Length = 1670

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 242 agtgctggtgatgtgctggaggatgatcc 270
           ||||||||||||||| |||| ||||||||
Sbjct: 343 agtgctggtgatgtgttggaagatgatcc 371



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 160     cgccctcgcggcggcgctcacgctg 184
               ||||||||||||||||||| |||||
Sbjct: 4863513 cgccctcgcggcggcgctcgcgctg 4863537



to top

>emb|BX005260.12| Zebrafish DNA sequence from clone DKEY-209F7 in linkage group 16,
              complete sequence
          Length = 197061

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 55     cccgtcccctctgtctcctcc 75
              |||||||||||||||||||||
Sbjct: 106613 cccgtcccctctgtctcctcc 106633



to top

>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9
          Length = 57246

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 242   agtgctggtgatgtgctggaggatgatcc 270
             ||||||||||||||| |||| ||||||||
Sbjct: 46638 agtgctggtgatgtgttggaagatgatcc 46610



to top

>ref|XM_469573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 158 ctcgccctcgcggcggcgct 177
           ||||||||||||||||||||
Sbjct: 417 ctcgccctcgcggcggcgct 398



to top

>ref|XM_479162.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 351

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ggcggcggcgatggggaagc 146
           ||||||||||||||||||||
Sbjct: 50  ggcggcggcgatggggaagc 31



to top

>ref|XM_472341.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 gctgcgggtgggcggcggcg 136
           ||||||||||||||||||||
Sbjct: 97  gctgcgggtgggcggcggcg 78



to top

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   atgctcgccctcgcggcggcgctc 178
             ||||||||| ||||||||||||||
Sbjct: 75419 atgctcgccgtcgcggcggcgctc 75442



to top

>ref|XM_366769.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
            (MG02845.4) partial mRNA
          Length = 2148

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 402  agcgcgatccggaccatgaacccg 425
            |||||||||||||||| |||||||
Sbjct: 2084 agcgcgatccggaccaggaacccg 2107



to top

>ref|XM_368949.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00295.4) partial mRNA
          Length = 2451

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  gctgcgggtgggcggcggcg 136
            ||||||||||||||||||||
Sbjct: 2172 gctgcgggtgggcggcggcg 2191



to top

>ref|XM_414217.1| PREDICTED: Gallus gallus similar to Growth-arrest-specific protein
           8 (Growth arrest-specific 11) (LOC415858), mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 ccaagtacaacaagaagatg 328
           ||||||||||||||||||||
Sbjct: 577 ccaagtacaacaagaagatg 596



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 155    atgctcgccctcgcggcggcgctc 178
              ||||||||| ||||||||||||||
Sbjct: 624770 atgctcgccgtcgcggcggcgctc 624747



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 158      ctcgccctcgcggcggcgct 177
                ||||||||||||||||||||
Sbjct: 28802224 ctcgccctcgcggcggcgct 28802243



to top

>ref|XM_846009.1| PREDICTED: Canis familiaris hypothetical protein LOC608874
            (LOC608874), mRNA
          Length = 1725

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  ccaaggactccaggtgcctc 352
            ||||||||||||||||||||
Sbjct: 1575 ccaaggactccaggtgcctc 1594



to top

>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12
          Length = 306650

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cctcgcggcggcgctcacgc 182
              ||||||||||||||||||||
Sbjct: 255033 cctcgcggcggcgctcacgc 255014



to top

>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    cgcggcggcgctcacgctgc 185
              ||||||||||||||||||||
Sbjct: 203776 cgcggcggcgctcacgctgc 203795



to top

>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    cgcggcggcgctcacgctgc 185
              ||||||||||||||||||||
Sbjct: 327820 cgcggcggcgctcacgctgc 327839



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 155    atgctcgccctcgcggcggcgctc 178
              ||||||||| ||||||||||||||
Sbjct: 433364 atgctcgccgtcgcggcggcgctc 433341



to top

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    caagaagatggtggccaagg 338
              ||||||||||||||||||||
Sbjct: 753216 caagaagatggtggccaagg 753197



to top

>dbj|AK145297.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930040H22
           product:hypothetical protein, full insert sequence
          Length = 1485

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 gagctgcgggtgggcggcgg 134
           ||||||||||||||||||||
Sbjct: 44  gagctgcgggtgggcggcgg 63



to top

>gb|BC070471.1| Mus musculus coiled-coil domain containing 66, mRNA (cDNA clone
           MGC:99436 IMAGE:30626499), complete cds
          Length = 2960

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 gagctgcgggtgggcggcgg 134
           ||||||||||||||||||||
Sbjct: 5   gagctgcgggtgggcggcgg 24



to top

>ref|NM_177111.2| Mus musculus coiled-coil domain containing 66 (Ccdc66), mRNA
          Length = 2960

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 gagctgcgggtgggcggcgg 134
           ||||||||||||||||||||
Sbjct: 5   gagctgcgggtgggcggcgg 24



to top

>dbj|AK170006.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630007M22
           product:hypothetical protein, full insert sequence
          Length = 2407

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 gagctgcgggtgggcggcgg 134
           ||||||||||||||||||||
Sbjct: 53  gagctgcgggtgggcggcgg 72



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 400     cgagcgcgatccggaccatg 419
               ||||||||||||||||||||
Sbjct: 2993927 cgagcgcgatccggaccatg 2993908



to top

>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence
          Length = 179919

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   cggtgtacaccacctgtgac 470
             ||||||||||||||||||||
Sbjct: 73462 cggtgtacaccacctgtgac 73443



to top

>emb|BX932390.2| Gallus gallus finished cDNA, clone ChEST97n24
          Length = 1560

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 ccaagtacaacaagaagatg 328
           ||||||||||||||||||||
Sbjct: 577 ccaagtacaacaagaagatg 596



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 127      ggcggcggcgatggggaagc 146
                ||||||||||||||||||||
Sbjct: 25315181 ggcggcggcgatggggaagc 25315162



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 158      ctcgccctcgcggcggcgct 177
                ||||||||||||||||||||
Sbjct: 28893548 ctcgccctcgcggcggcgct 28893567



to top

>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 315     acaacaagaagatggtggcc 334
               ||||||||||||||||||||
Sbjct: 2075674 acaacaagaagatggtggcc 2075655



to top

>gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosome 14, complete
             sequence
          Length = 198799

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gagctgcgggtgggcggcgg 134
             ||||||||||||||||||||
Sbjct: 54673 gagctgcgggtgggcggcgg 54654



to top

>gb|AE004880.1| Pseudomonas aeruginosa PAO1, section 441 of 529 of the complete
            genome
          Length = 13518

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 127  ggcggcggcgatggggaagccgcg 150
            ||||||||||||||| ||||||||
Sbjct: 6484 ggcggcggcgatgggcaagccgcg 6461



to top

>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
              sequence
          Length = 147344

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    ctcgccctcgcggcggcgct 177
              ||||||||||||||||||||
Sbjct: 109205 ctcgccctcgcggcggcgct 109224



to top

>gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) genomic sequence
          Length = 43180

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 166   cgcggcggcgctcacgctgctcct 189
             ||||||||| ||||||||||||||
Sbjct: 30642 cgcggcggctctcacgctgctcct 30619



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     cgcggcggcgctcacgctgc 185
               ||||||||||||||||||||
Sbjct: 5815526 cgcggcggcgctcacgctgc 5815545



to top

>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence
          Length = 87093

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   cgccctcgcggcggcgctca 179
             ||||||||||||||||||||
Sbjct: 57819 cgccctcgcggcggcgctca 57838



to top

>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    ggcggcggcgatggggaagc 146
              ||||||||||||||||||||
Sbjct: 131852 ggcggcggcgatggggaagc 131833



to top

>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:B1056G08
          Length = 168173

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 127  ggcggcggcgatggggaagc 146
            ||||||||||||||||||||
Sbjct: 8271 ggcggcggcgatggggaagc 8252



to top

>emb|X82151.1|CCPAX6DNA C.coturnix Pax-QNR gene
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  cccgtcccctctgtctcctc 74
           ||||||||||||||||||||
Sbjct: 327 cccgtcccctctgtctcctc 346



to top

>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full
           insert sequence
          Length = 1049

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 gcggcgctcacgctgctcct 189
           ||||||||||||||||||||
Sbjct: 743 gcggcgctcacgctgctcct 724



to top

>dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C14, full
           insert sequence
          Length = 1854

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 gctgcgggtgggcggcggcg 136
           ||||||||||||||||||||
Sbjct: 591 gctgcgggtgggcggcggcg 572



to top

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    ccgcgggcgatgctcgccctcgcg 169
              |||||||||||||||||| |||||
Sbjct: 680351 ccgcgggcgatgctcgccatcgcg 680374



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 155    atgctcgccctcgcggcggcgctc 178
              ||||||||| ||||||||||||||
Sbjct: 413272 atgctcgccgtcgcggcggcgctc 413249



to top

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     ggcggcggcgatggggaagc 146
               ||||||||||||||||||||
Sbjct: 5503989 ggcggcggcgatggggaagc 5503970



to top

>emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chromosome 14, complete
              sequence
          Length = 210837

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gagctgcgggtgggcggcgg 134
              ||||||||||||||||||||
Sbjct: 125928 gagctgcgggtgggcggcgg 125909



to top

>emb|AL606921.6| Mouse DNA sequence from clone RP23-209C6 on chromosome 4, complete
              sequence
          Length = 173639

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    acggggagctgcgggtgggcggcg 133
              |||| |||||||||||||||||||
Sbjct: 144199 acggtgagctgcgggtgggcggcg 144176


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,740,965
Number of Sequences: 3902068
Number of extensions: 4740965
Number of successful extensions: 100248
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97971
Number of HSP's gapped (non-prelim): 2257
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top