>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad|
           ubiquitination regulatory factor 1 homolog) (DSmurf)
           (Lethal with a checkpoint kinase protein)
          Length = 1061

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
 Frame = +2

Query: 416 SALPGE-----TS*QGGEQSSLRHREAVG-RHGSLWDGGGRGGEG 532
           +A PG+     +S Q GE+SS R R + G R+G    GGG GG G
Sbjct: 450 AATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSG 494

>PI51A_HUMAN (Q99755) Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha (EC|
           2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase
           type I alpha) (PtdIns(4)P-5-kinase alpha) (PIP5KIalpha)
           (68 kDa type I phosphatidylinositol-4-phosphate 5-kinase
           alpha)
          Length = 562

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +3

Query: 318 STSVANGQPQPAADPSSICKLQADLPIARRHSLQRFLEKRRDRVVSKAPYGTGKPSEGMG 497
           S+SV      PA  PS  C L +     +R      LE R+D  +S  PY +G P + +G
Sbjct: 9   SSSVGFSSFDPAV-PS--CTLSSAASGIKRPMASEVLEARQDSYISLVPYASGMPIKKIG 65

Query: 498 ASGMEAVAE 524
              +++  E
Sbjct: 66  HRSVDSSGE 74

>TNP3_ECOLI (P03008) Transposase for transposon Tn3|
          Length = 1015

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = -1

Query: 545  FWLLGLPLRDRLHPRGSHAFRRLPGAVGSFAHHPVTTFLQEALKGVSPGDGKISLKLANR 366
            FWLLG     RL   G+  F R+        H      L +  +G S    KI L+    
Sbjct: 788  FWLLGYQFSPRLADAGASVFWRMD-------HDADYGVLNDIARGQS-DPRKIVLQWDEM 839

Query: 365  ARISGRLRL-----SICYRSALE*ERP 300
             R +G L+L     S+  RS L+ ERP
Sbjct: 840  IRTAGSLKLGKVQASVLVRSLLKSERP 866

>GAT26_ARATH (Q9LRH6) GATA transcription factor 26 (ZIM protein)|
          Length = 309

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 48  GRPPLANGSSRSGMLPMSSPPANPGQLTIFYGGSVCVYDSVPPEK 182
           G   +A+ S  S +L +S PP    QLTI + G V V+D+V  +K
Sbjct: 59  GSQLVAHRSDGSELL-VSRPPEGANQLTISFRGQVYVFDAVGADK 102

>ELN_HUMAN (P15502) Elastin precursor (Tropoelastin)|
          Length = 786

 Score = 27.3 bits (59), Expect(2) = 6.5
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +3

Query: 462 PYGTGKPSEGMGASGMEAVAEGKAQ*PKGRKIAP 563
           PY TGK   G G  G+ A A GKA  P G  + P
Sbjct: 220 PYTTGKLPYGYGPGGV-AGAAGKAGYPTGTGVGP 252



 Score = 20.8 bits (42), Expect(2) = 6.5
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +1

Query: 400 PGDTPFSASWRNVVTGW*AKLPTAPG 477
           PG  PF      V  G+  K P  PG
Sbjct: 190 PGVGPFGGPQPGVPLGYPIKAPKLPG 215

>GCSPB_AERPE (Q9YA18) Probable glycine dehydrogenase [decarboxylating] subunit 2|
           (EC 1.4.4.2) (Glycine decarboxylase subunit 2) (Glycine
           cleavage system P-protein subunit 2)
          Length = 521

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 25/89 (28%), Positives = 38/89 (42%)
 Frame = +3

Query: 261 VMSATNAIQAMLTRSLSLQSTSVANGQPQPAADPSSICKLQADLPIARRHSLQRFLEKRR 440
           V+ A   +Q  L     + + +V      PAA      +L   L I R H ++  L+KRR
Sbjct: 119 VLEAIYMVQEWLRHITGMDACTV-----HPAAGSQG--ELAGVLMIKRFHEMRGDLDKRR 171

Query: 441 DRVVSKAPYGTGKPSEGMGASGMEAVAEG 527
             +V  + +GT   S  MG   +  V  G
Sbjct: 172 VIIVPDSAHGTNPASAAMGGFQVVEVPTG 200

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 48  GRPPLANGSSRSGMLPMSSPP 110
           G+PP+ NGSS S + P   PP
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPP 343

>RS12_DEIRA (Q9RXK7) 30S ribosomal protein S12|
          Length = 131

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 387 DLPIARRHSLQRFLEKR--RDRVVSKAPYGTGKPSEGMGAS 503
           DLP  R H ++  L+ +  +DR  S++ YGT KP  G  A+
Sbjct: 89  DLPGVRYHIVRGSLDTQGVKDRNKSRSKYGTKKPKAGAAAA 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,492,783
Number of Sequences: 219361
Number of extensions: 1936832
Number of successful extensions: 6599
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6570
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)