ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YGK1_YEAST (P53144) Hypothetical 25.3 kDa protein in RPL28-SEH1 ... 86 1e-16
2YB92_YEAST (P38331) Hypothetical 27.6 kDa protein in THI2-ALG7 i... 81 2e-15
3CYSA_BORPE (Q7VZE5) Sulfate/thiosulfate import ATP-binding prote... 30 5.0
4CYSA_BORPA (Q7W9U5) Sulfate/thiosulfate import ATP-binding prote... 30 5.0
5CYSA_BORBR (Q7WGW1) Sulfate/thiosulfate import ATP-binding prote... 30 5.0
6EPLIN_MOUSE (Q9ERG0) Epithelial protein lost in neoplasm (mEPLIN) 29 8.6

>YGK1_YEAST (P53144) Hypothetical 25.3 kDa protein in RPL28-SEH1 intergenic|
           region
          Length = 215

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 40/77 (51%), Positives = 55/77 (71%)
 Frame = +2

Query: 350 FLTLCHSLKTTKRKGWINHSIKGPESIADHMYRMALMALIADDLPAVNRERCIKIAIVHD 529
           FL +   LKT +R GW++H I   ESI+DHMYRM L  ++  D   V+R +CI+IA+VHD
Sbjct: 32  FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHD 90

Query: 530 IAEAIVGDITPSDGIPK 580
            AE++VGDITP+D + K
Sbjct: 91  FAESLVGDITPNDPMTK 107



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>YB92_YEAST (P38331) Hypothetical 27.6 kDa protein in THI2-ALG7 intergenic|
           region
          Length = 238

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 38/77 (49%), Positives = 57/77 (74%)
 Frame = +2

Query: 350 FLTLCHSLKTTKRKGWINHSIKGPESIADHMYRMALMALIADDLPAVNRERCIKIAIVHD 529
           FL +   LK  +R G+++  IK  ESI+DHMYR++++ ++  D   VNR++C++IA+VHD
Sbjct: 51  FLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHD 109

Query: 530 IAEAIVGDITPSDGIPK 580
           IAE++VGDITP D I K
Sbjct: 110 IAESLVGDITPVDPIGK 126



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>CYSA_BORPE (Q7VZE5) Sulfate/thiosulfate import ATP-binding protein cysA (EC|
           3.6.3.25) (Sulfate-transporting ATPase)
          Length = 354

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 440 MYRMALMALIADDLPAVNRERCIKIAIVHDIAEAIVGDITPSDGIP 577
           ++R+  +AL A DLP  + +R I     HDI  A  G   P  GIP
Sbjct: 251 VWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAP--GIP 294



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>CYSA_BORPA (Q7W9U5) Sulfate/thiosulfate import ATP-binding protein cysA (EC|
           3.6.3.25) (Sulfate-transporting ATPase)
          Length = 354

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 440 MYRMALMALIADDLPAVNRERCIKIAIVHDIAEAIVGDITPSDGIP 577
           ++R+  +AL A DLP  + +R I     HDI  A  G   P  GIP
Sbjct: 251 VWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAP--GIP 294



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>CYSA_BORBR (Q7WGW1) Sulfate/thiosulfate import ATP-binding protein cysA (EC|
           3.6.3.25) (Sulfate-transporting ATPase)
          Length = 354

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 440 MYRMALMALIADDLPAVNRERCIKIAIVHDIAEAIVGDITPSDGIP 577
           ++R+  +AL A DLP  + +R I     HDI  A  G   P  GIP
Sbjct: 251 VWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAP--GIP 294



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>EPLIN_MOUSE (Q9ERG0) Epithelial protein lost in neoplasm (mEPLIN)|
          Length = 753

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -3

Query: 137 VAASLRPSGEKRPRSLCWSLRWGSVEKAEESACGGGFA 24
           VAAS R S  K P++   SLR G  E  +    GGG A
Sbjct: 591 VAASFRTSSIKSPKTSSPSLRKGWSESEQSEEFGGGIA 628


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,384,401
Number of Sequences: 219361
Number of extensions: 904414
Number of successful extensions: 2939
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2936
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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