Clone Name | bart29b02 |
---|---|
Clone Library Name | barley_pub |
>YGK1_YEAST (P53144) Hypothetical 25.3 kDa protein in RPL28-SEH1 intergenic| region Length = 215 Score = 85.5 bits (210), Expect = 1e-16 Identities = 40/77 (51%), Positives = 55/77 (71%) Frame = +2 Query: 350 FLTLCHSLKTTKRKGWINHSIKGPESIADHMYRMALMALIADDLPAVNRERCIKIAIVHD 529 FL + LKT +R GW++H I ESI+DHMYRM L ++ D V+R +CI+IA+VHD Sbjct: 32 FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHD 90 Query: 530 IAEAIVGDITPSDGIPK 580 AE++VGDITP+D + K Sbjct: 91 FAESLVGDITPNDPMTK 107
>YB92_YEAST (P38331) Hypothetical 27.6 kDa protein in THI2-ALG7 intergenic| region Length = 238 Score = 80.9 bits (198), Expect = 2e-15 Identities = 38/77 (49%), Positives = 57/77 (74%) Frame = +2 Query: 350 FLTLCHSLKTTKRKGWINHSIKGPESIADHMYRMALMALIADDLPAVNRERCIKIAIVHD 529 FL + LK +R G+++ IK ESI+DHMYR++++ ++ D VNR++C++IA+VHD Sbjct: 51 FLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHD 109 Query: 530 IAEAIVGDITPSDGIPK 580 IAE++VGDITP D I K Sbjct: 110 IAESLVGDITPVDPIGK 126
>CYSA_BORPE (Q7VZE5) Sulfate/thiosulfate import ATP-binding protein cysA (EC| 3.6.3.25) (Sulfate-transporting ATPase) Length = 354 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 440 MYRMALMALIADDLPAVNRERCIKIAIVHDIAEAIVGDITPSDGIP 577 ++R+ +AL A DLP + +R I HDI A G P GIP Sbjct: 251 VWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAP--GIP 294
>CYSA_BORPA (Q7W9U5) Sulfate/thiosulfate import ATP-binding protein cysA (EC| 3.6.3.25) (Sulfate-transporting ATPase) Length = 354 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 440 MYRMALMALIADDLPAVNRERCIKIAIVHDIAEAIVGDITPSDGIP 577 ++R+ +AL A DLP + +R I HDI A G P GIP Sbjct: 251 VWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAP--GIP 294
>CYSA_BORBR (Q7WGW1) Sulfate/thiosulfate import ATP-binding protein cysA (EC| 3.6.3.25) (Sulfate-transporting ATPase) Length = 354 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 440 MYRMALMALIADDLPAVNRERCIKIAIVHDIAEAIVGDITPSDGIP 577 ++R+ +AL A DLP + +R I HDI A G P GIP Sbjct: 251 VWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAP--GIP 294
>EPLIN_MOUSE (Q9ERG0) Epithelial protein lost in neoplasm (mEPLIN)| Length = 753 Score = 29.3 bits (64), Expect = 8.6 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -3 Query: 137 VAASLRPSGEKRPRSLCWSLRWGSVEKAEESACGGGFA 24 VAAS R S K P++ SLR G E + GGG A Sbjct: 591 VAASFRTSSIKSPKTSSPSLRKGWSESEQSEEFGGGIA 628 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,384,401 Number of Sequences: 219361 Number of extensions: 904414 Number of successful extensions: 2939 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2936 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)