ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... 30 2.5
2RNS2_PANGI (P80890) Ribonuclease 2 (EC 3.1.-.-) 30 2.5
3RNS1_PANGI (P80889) Ribonuclease 1 (EC 3.1.-.-) 30 2.5
4PRU1_PRUAR (O50001) Major allergen Pru ar 1 29 5.5
5PHF8_MOUSE (Q80TJ7) PHD finger protein 8 29 5.5
6ALL2_APIGR (P92918) Major allergen Api g 2 (Api g 1.0201) 29 7.2
7PR11_PETCR (P19417) Pathogenesis-related protein A (PR1-1) 28 9.4

>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = +2

Query: 398 LDGDGG----VGTLREGARGVGPPRGVEPR 475
           +DGDGG     GTL E  RG GP    EPR
Sbjct: 1   MDGDGGRRDVPGTLMEPGRGAGPAGMAEPR 30



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>RNS2_PANGI (P80890) Ribonuclease 2 (EC 3.1.-.-)|
          Length = 153

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 359 PQAYKSFVRSCALLDGDGGVGTLREGARGVGPP 457
           P+A+   ++S  +L+G+GGVGT++    G   P
Sbjct: 31  PKAFPEGIKSVQVLEGNGGVGTIKNVTLGDATP 63



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>RNS1_PANGI (P80889) Ribonuclease 1 (EC 3.1.-.-)|
          Length = 154

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +2

Query: 359 PQAYKSFVRSCALLDGDGGVGTLR 430
           P+A+   ++S  +++GDGGVGT++
Sbjct: 31  PKAFPQAIKSSEIIEGDGGVGTVK 54



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>PRU1_PRUAR (O50001) Major allergen Pru ar 1|
          Length = 160

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 359 PQAYKSFVRSCALLDGDGGVGTLREGARGVG 451
           P+   + V+   +L+GDGGVGT+++   G G
Sbjct: 32  PKVAPTAVKGTEILEGDGGVGTIKKVTFGEG 62



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>PHF8_MOUSE (Q80TJ7) PHD finger protein 8|
          Length = 1023

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 6   QTRPDQTNQRRTAPHPSHQTSSQPDSKRAPE 98
           Q RP  +N   T P P+  T+ QPD+  +P+
Sbjct: 904 QPRPQDSNPIMTMPAPTVATTPQPDTSSSPQ 934



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>ALL2_APIGR (P92918) Major allergen Api g 2 (Api g 1.0201)|
          Length = 159

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 359 PQAYKSFVRSCALLDGDGGVGTLR 430
           P+     ++S  +L+GDGGVGT++
Sbjct: 32  PKVLPQLIKSVEILEGDGGVGTVK 55



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>PR11_PETCR (P19417) Pathogenesis-related protein A (PR1-1)|
          Length = 155

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 359 PQAYKSFVRSCALLDGDGGVGTLR 430
           PQ     ++S   L+GDGGVGT++
Sbjct: 32  PQVLPGAIKSSETLEGDGGVGTVK 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.121    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,505,559
Number of Sequences: 219361
Number of extensions: 677344
Number of successful extensions: 2442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2435
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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