ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7... 30 5.3
2SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh... 29 7.0

>PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7.1.67)|
           (PI4-kinase alpha) (PtdIns-4-kinase alpha) (PI4K-alpha)
          Length = 2044

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 NQSPAAPTISPAELVRIKNSIRSAATPPDELAALFLK-GIPHTPFLGDRSIFSLAVSRLT 324
           N +    T++PAEL  ++++I +   PP E++AL  K     + +L   S++ L   R+ 
Sbjct: 790 NSAMKNDTVTPAELSELRSTIINLLDPPPEVSALINKLDFAMSTYL--LSVYRLEYMRVL 847

Query: 325 AAARPD 342
            +  PD
Sbjct: 848 RSTDPD 853



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>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
           (Proline-rich synapse associated protein 2) (ProSAP2)
           (SPANK-2)
          Length = 1815

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 139 STQNQSPAAPTISPAELVRIKNSIRSAATPPDELAALFLKGIPHTPFLG-DRSIFSLAVS 315
           +T  Q P +  I+PAE+  +    R     P++L     KGIP T  +G D  + SL   
Sbjct: 812 ATVKQRPTSRRITPAEISSLFE--RQGLPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEG 869

Query: 316 R 318
           R
Sbjct: 870 R 870


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,359,617
Number of Sequences: 219361
Number of extensions: 342130
Number of successful extensions: 1429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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