ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466721.1| Oryza sativa (japonica cultivar-group), mRNA 163 8e-37
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
3dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
4dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
5dbj|AK071805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 8e-37
6ref|XM_507375.1| PREDICTED Oryza sativa (japonica cultivar-group... 88 4e-14
7ref|XM_478751.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
8ref|XM_506416.2| PREDICTED Oryza sativa (japonica cultivar-group... 88 4e-14
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11dbj|AK109391.2| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
12dbj|AK100091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
13dbj|AK059994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
14gb|BT017366.1| Zea mays clone EL01N0324F07.c mRNA sequence 64 6e-07
15gb|BT017280.1| Zea mays clone EL01N0314B02.c mRNA sequence 64 6e-07
16gb|AY104900.1| Zea mays PCO136752 mRNA sequence 64 6e-07
17emb|BX950179.6| Zebrafish DNA sequence from clone DKEY-27P23 in ... 44 0.52
18emb|CR628392.7| Zebrafish DNA sequence from clone CH211-209N13 i... 44 0.52
19emb|CR896876.1| Zebrafish DNA sequence from clone DKEY-27P23 in ... 44 0.52
20gb|AY732134.1| Hepatitis C virus isolate 00CHNXJB28 from China p... 42 2.1
21gb|AY732126.1| Hepatitis C virus isolate 00CHNXJB18 from China p... 42 2.1
22gb|AF283330.1|F283327S04 Homo sapiens candidate tumor suppressor... 42 2.1
23gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 2.1
24gb|AC068287.5| Homo sapiens BAC clone RP11-532L9 from 2, complet... 42 2.1
25dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
26emb|AL831738.4| Mouse DNA sequence from clone RP23-451K12 on chr... 42 2.1
27gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cance... 40 8.2
28gb|AY732102.1| Hepatitis C virus isolate 00CHNYN7F from China po... 40 8.2
29gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, comp... 40 8.2
30gb|AC116728.12| Mus musculus chromosome 3, clone RP23-345H12, co... 40 8.2
31gb|AF460184.1| Sterculia lanceolata internal transcribed spacer ... 40 8.2
32gb|AF460183.1| Sterculia nobilis internal transcribed spacer 1, ... 40 8.2
33gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 8.2
34gb|AC161815.4| Mus musculus BAC clone RP23-353C21 from chromosom... 40 8.2
35gb|AC139766.15| Homo sapiens 3 BAC RP11-688P9 (Roswell Park Canc... 40 8.2
36gb|AC131210.3| Homo sapiens 3 BAC RP13-635I23 (Roswell Park Canc... 40 8.2
37gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, comp... 40 8.2
38gb|AC104894.14| Mus musculus chromosome 1, clone RP23-290I22, co... 40 8.2
39gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 8.2
40gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.2
41gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 8.2
42gb|AC114925.6| Mus musculus BAC clone RP24-349O21 from 16, compl... 40 8.2
43emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 8.2
44gb|AC157811.3| Mus musculus chromosome 1, clone RP24-377C24, com... 40 8.2 
>ref|XM_466721.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score =  163 bits (82), Expect = 8e-37
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                       
Query: 407 ctcaagttagttgtcaggcatctttagcgtcattcagctaccctgagttatcttccaaac 466
           |||||||| | ||||  ||||||||| | |||||||||| |||||||||     ||||||
Sbjct: 370 ctcaagttggctgtcgagcatctttatcatcattcagcttccctgagttggagaccaaac 429

                                                                       
Query: 467 ctaaatggtggtggaggaccctggcatgtgtaccttatcttctgccactgcacaacatgt 526
           ||| |||||||||||||||| | || ||||| || ||||||||||| |||||||||||||
Sbjct: 430 ctagatggtggtggaggaccttagcgtgtgtcccctatcttctgccgctgcacaacatgt 489

                                                                       
Query: 527 ggtcgcacgcagatgctgtgtaccagcttcatccatacttgcaacagtttgggctgtttt 586
           ||||    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 490 ggtcctttgcagatgctgtgtaccagcttcatccatacttgcagcagtttgggttgttct 549

                     
Query: 587 atgccttcat 596
           |||| |||||
Sbjct: 550 atgcattcat 559
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  163 bits (82), Expect = 8e-37
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                            
Query: 407      ctcaagttagttgtcaggcatctttagcgtcattcagctaccctgagttatcttccaaac 466
                |||||||| | ||||  ||||||||| | |||||||||| |||||||||     ||||||
Sbjct: 24288476 ctcaagttggctgtcgagcatctttatcatcattcagcttccctgagttggagaccaaac 24288535

                                                                            
Query: 467      ctaaatggtggtggaggaccctggcatgtgtaccttatcttctgccactgcacaacatgt 526
                ||| |||||||||||||||| | || ||||| || ||||||||||| |||||||||||||
Sbjct: 24288536 ctagatggtggtggaggaccttagcgtgtgtcccctatcttctgccgctgcacaacatgt 24288595

                                                                            
Query: 527      ggtcgcacgcagatgctgtgtaccagcttcatccatacttgcaacagtttgggctgtttt 586
                ||||    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 24288596 ggtcctttgcagatgctgtgtaccagcttcatccatacttgcagcagtttgggttgttct 24288655

                          
Query: 587      atgccttcat 596
                |||| |||||
Sbjct: 24288656 atgcattcat 24288665



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 444     ctaccctgagttatcttccaaacct 468
               |||||||| ||||||||||||||||
Sbjct: 7495392 ctaccctgtgttatcttccaaacct 7495416
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>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score =  163 bits (82), Expect = 8e-37
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                         
Query: 407   ctcaagttagttgtcaggcatctttagcgtcattcagctaccctgagttatcttccaaac 466
             |||||||| | ||||  ||||||||| | |||||||||| |||||||||     ||||||
Sbjct: 88864 ctcaagttggctgtcgagcatctttatcatcattcagcttccctgagttggagaccaaac 88923

                                                                         
Query: 467   ctaaatggtggtggaggaccctggcatgtgtaccttatcttctgccactgcacaacatgt 526
             ||| |||||||||||||||| | || ||||| || ||||||||||| |||||||||||||
Sbjct: 88924 ctagatggtggtggaggaccttagcgtgtgtcccctatcttctgccgctgcacaacatgt 88983

                                                                         
Query: 527   ggtcgcacgcagatgctgtgtaccagcttcatccatacttgcaacagtttgggctgtttt 586
             ||||    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 88984 ggtcctttgcagatgctgtgtaccagcttcatccatacttgcagcagtttgggttgttct 89043

                       
Query: 587   atgccttcat 596
             |||| |||||
Sbjct: 89044 atgcattcat 89053
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>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0407A09
          Length = 103788

 Score =  163 bits (82), Expect = 8e-37
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                         
Query: 407   ctcaagttagttgtcaggcatctttagcgtcattcagctaccctgagttatcttccaaac 466
             |||||||| | ||||  ||||||||| | |||||||||| |||||||||     ||||||
Sbjct: 18014 ctcaagttggctgtcgagcatctttatcatcattcagcttccctgagttggagaccaaac 18073

                                                                         
Query: 467   ctaaatggtggtggaggaccctggcatgtgtaccttatcttctgccactgcacaacatgt 526
             ||| |||||||||||||||| | || ||||| || ||||||||||| |||||||||||||
Sbjct: 18074 ctagatggtggtggaggaccttagcgtgtgtcccctatcttctgccgctgcacaacatgt 18133

                                                                         
Query: 527   ggtcgcacgcagatgctgtgtaccagcttcatccatacttgcaacagtttgggctgtttt 586
             ||||    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 18134 ggtcctttgcagatgctgtgtaccagcttcatccatacttgcagcagtttgggttgttct 18193

                       
Query: 587   atgccttcat 596
             |||| |||||
Sbjct: 18194 atgcattcat 18203
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>dbj|AK071805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108N22, full
           insert sequence
          Length = 1070

 Score =  163 bits (82), Expect = 8e-37
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                       
Query: 407 ctcaagttagttgtcaggcatctttagcgtcattcagctaccctgagttatcttccaaac 466
           |||||||| | ||||  ||||||||| | |||||||||| |||||||||     ||||||
Sbjct: 370 ctcaagttggctgtcgagcatctttatcatcattcagcttccctgagttggagaccaaac 429

                                                                       
Query: 467 ctaaatggtggtggaggaccctggcatgtgtaccttatcttctgccactgcacaacatgt 526
           ||| |||||||||||||||| | || ||||| || ||||||||||| |||||||||||||
Sbjct: 430 ctagatggtggtggaggaccttagcgtgtgtcccctatcttctgccgctgcacaacatgt 489

                                                                       
Query: 527 ggtcgcacgcagatgctgtgtaccagcttcatccatacttgcaacagtttgggctgtttt 586
           ||||    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct: 490 ggtcctttgcagatgctgtgtaccagcttcatccatacttgcagcagtttgggttgttct 549

                     
Query: 587 atgccttcat 596
           |||| |||||
Sbjct: 550 atgcattcat 559
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>ref|XM_507375.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1092_A07.131
           mRNA
          Length = 1250

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
           |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 538 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 597

                                                       
Query: 487 ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
            | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 598 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 641
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>ref|XM_478751.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1147

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
           |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 427 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 486

                                                       
Query: 487 ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
            | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 487 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 530
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>ref|XM_506416.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1092_A07.131
           mRNA
          Length = 1351

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
           |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 528 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 587

                                                       
Query: 487 ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
            | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 588 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 631
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                            
Query: 427      tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
                |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 22798567 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 22798508

                                                            
Query: 487      ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
                 | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 22798507 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 22798464
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1092_A07
          Length = 137081

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                          
Query: 427    tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
              |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 117909 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 117850

                                                          
Query: 487    ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
               | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 117849 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 117806
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>dbj|AK109391.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H03, full
           insert sequence
          Length = 1273

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
           |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 484 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 543

                                                       
Query: 487 ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
            | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 544 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 587
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>dbj|AK100091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J19, full
           insert sequence
          Length = 1249

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
           |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 537 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 596

                                                       
Query: 487 ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
            | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 597 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 640
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>dbj|AK059994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E09, full
           insert sequence
          Length = 1147

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 tctttagcgtcattcagctaccctgagttatcttccaaacctaaatggtggtggaggacc 486
           |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| 
Sbjct: 427 tctttagcgtcattcagctaccctgagttgacttcgaaacccagatggtggtggaggact 486

                                                       
Query: 487 ctggcatgtgtaccttatcttctgccactgcacaacatgtggtc 530
            | |||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 487 gtagcatgtgtgccctacttgcttccactccacaacatgtggtc 530
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>gb|BT017366.1| Zea mays clone EL01N0324F07.c mRNA sequence
          Length = 1159

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 439 ttcagctaccctgagttatcttccaaacctaaatggtggtggaggaccctggcatgtgta 498
           ||||||||||||||| |  | |||||||| | |||||||||||| || || || ||||| 
Sbjct: 468 ttcagctaccctgagctgacatccaaacccagatggtggtggagaactctagcttgtgtg 527

                                           
Query: 499 ccttatcttctgccactgcacaacatgtggtc 530
           || ||  | |||||||||||||||||||||||
Sbjct: 528 ccgtacttgctgccactgcacaacatgtggtc 559
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>gb|BT017280.1| Zea mays clone EL01N0314B02.c mRNA sequence
          Length = 1047

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 439 ttcagctaccctgagttatcttccaaacctaaatggtggtggaggaccctggcatgtgta 498
           ||||||||||||||| |  | |||||||| | |||||||||||| || || || ||||| 
Sbjct: 582 ttcagctaccctgagctgacatccaaacccagatggtggtggagaactctagcttgtgtg 641

                                           
Query: 499 ccttatcttctgccactgcacaacatgtggtc 530
           || ||  | |||||||||||||||||||||||
Sbjct: 642 ccgtacttgctgccactgcacaacatgtggtc 673
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>gb|AY104900.1| Zea mays PCO136752 mRNA sequence
          Length = 1164

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 439 ttcagctaccctgagttatcttccaaacctaaatggtggtggaggaccctggcatgtgta 498
           ||||||||||||||| |  | |||||||| | |||||||||||| || || || ||||| 
Sbjct: 488 ttcagctaccctgagctgacatccaaacccagatggtggtggagaactctagcttgtgtg 547

                                           
Query: 499 ccttatcttctgccactgcacaacatgtggtc 530
           || ||  | |||||||||||||||||||||||
Sbjct: 548 ccgtacttgctgccactgcacaacatgtggtc 579
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>emb|BX950179.6| Zebrafish DNA sequence from clone DKEY-27P23 in linkage group 5, complete
              sequence
          Length = 235445

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 238    cttaaactgtgggcaccagcac 259
              ||||||||||||||||||||||
Sbjct: 183673 cttaaactgtgggcaccagcac 183694
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>emb|CR628392.7| Zebrafish DNA sequence from clone CH211-209N13 in linkage group 5,
            complete sequence
          Length = 147269

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 238  cttaaactgtgggcaccagcac 259
            ||||||||||||||||||||||
Sbjct: 8712 cttaaactgtgggcaccagcac 8733
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>emb|CR896876.1| Zebrafish DNA sequence from clone DKEY-27P23 in linkage group 5,
             complete sequence
          Length = 75765

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 238   cttaaactgtgggcaccagcac 259
             ||||||||||||||||||||||
Sbjct: 23993 cttaaactgtgggcaccagcac 24014
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>gb|AY732134.1| Hepatitis C virus isolate 00CHNXJB28 from China polyprotein gene,
           partial cds
          Length = 517

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 40  gagccgcggtgccgccggtga 60
           |||||||||||||||||||||
Sbjct: 181 gagccgcggtgccgccggtga 161
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>gb|AY732126.1| Hepatitis C virus isolate 00CHNXJB18 from China polyprotein gene,
           partial cds
          Length = 513

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 40  gagccgcggtgccgccggtga 60
           |||||||||||||||||||||
Sbjct: 190 gagccgcggtgccgccggtga 170
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>gb|AF283330.1|F283327S04 Homo sapiens candidate tumor suppressor protein (LRP1B) gene, exon
           4
          Length = 1029

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 285 tttgagagcttgttttgattt 305
           |||||||||||||||||||||
Sbjct: 88  tttgagagcttgttttgattt 68
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 42      gccgcggtgccgccggtgacg 62
               |||||||||||||||||||||
Sbjct: 3592567 gccgcggtgccgccggtgacg 3592587
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>gb|AC068287.5| Homo sapiens BAC clone RP11-532L9 from 2, complete sequence
          Length = 160222

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    tttgagagcttgttttgattt 305
              |||||||||||||||||||||
Sbjct: 105904 tttgagagcttgttttgattt 105924
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>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1705_E12
          Length = 191416

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 444   ctaccctgagttatcttccaaacct 468
             |||||||| ||||||||||||||||
Sbjct: 89098 ctaccctgtgttatcttccaaacct 89122
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>emb|AL831738.4| Mouse DNA sequence from clone RP23-451K12 on chromosome 4, complete
             sequence
          Length = 188894

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 458   cttccaaacctaaatggtggtggag 482
             ||||||||||||| |||||||||||
Sbjct: 41038 cttccaaacctaagtggtggtggag 41062
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>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 226269

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   tttgagagcttgttttgatt 304
             ||||||||||||||||||||
Sbjct: 29188 tttgagagcttgttttgatt 29207
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>gb|AY732102.1| Hepatitis C virus isolate 00CHNYN7F from China polyprotein gene,
           partial cds
          Length = 540

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  gagccgcggtgccgccggtg 59
           ||||||||||||||||||||
Sbjct: 199 gagccgcggtgccgccggtg 180
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>gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, complete sequence
          Length = 210441

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tgcaaattctcagctatttg 172
             ||||||||||||||||||||
Sbjct: 28493 tgcaaattctcagctatttg 28512
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>gb|AC116728.12| Mus musculus chromosome 3, clone RP23-345H12, complete sequence
          Length = 192916

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tgcaaattctcagctatttg 172
             ||||||||||||||||||||
Sbjct: 57052 tgcaaattctcagctatttg 57033
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>gb|AF460184.1| Sterculia lanceolata internal transcribed spacer 1, partial
          sequence; 5.8S ribosomal RNA gene, and internal
          transcribed spacer 2, complete sequence
          Length = 644

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 68 gagcacgacggtcgcctctctccg 91
          |||| |||||||||||||||||||
Sbjct: 70 gagcgcgacggtcgcctctctccg 93
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>gb|AF460183.1| Sterculia nobilis internal transcribed spacer 1, partial
          sequence; 5.8S ribosomal RNA gene, and internal
          transcribed spacer 2, complete sequence
          Length = 643

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 68 gagcacgacggtcgcctctctccg 91
          |||| |||||||||||||||||||
Sbjct: 66 gagcgcgacggtcgcctctctccg 89
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 136    ggaatagctactgcaactgcaaat 159
              |||||||| |||||||||||||||
Sbjct: 112015 ggaatagcaactgcaactgcaaat 111992
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>gb|AC161815.4| Mus musculus BAC clone RP23-353C21 from chromosome 16, complete sequence
          Length = 197690

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    tgcaacagtttgggctgttt 585
              ||||||||||||||||||||
Sbjct: 184477 tgcaacagtttgggctgttt 184496
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>gb|AC139766.15| Homo sapiens 3 BAC RP11-688P9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187748

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaattctcagctatttggat 175
              ||||||||||||||||||||
Sbjct: 134023 aaattctcagctatttggat 134004
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>gb|AC131210.3| Homo sapiens 3 BAC RP13-635I23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 182479

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   gagttatcttccaaacctaa 470
             ||||||||||||||||||||
Sbjct: 79483 gagttatcttccaaacctaa 79502
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>gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, complete sequence
          Length = 178733

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    cgattttgtccaagatcctg 109
             ||||||||||||||||||||
Sbjct: 45199 cgattttgtccaagatcctg 45218
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>gb|AC104894.14| Mus musculus chromosome 1, clone RP23-290I22, complete sequence
          Length = 185038

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   tctcaagttagttgtcaggc 425
             ||||||||||||||||||||
Sbjct: 22423 tctcaagttagttgtcaggc 22404
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>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 136    ggaatagctactgcaactgcaaat 159
              |||||||| |||||||||||||||
Sbjct: 232167 ggaatagcaactgcaactgcaaat 232144
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 289     agagcttgttttgatttttc 308
               ||||||||||||||||||||
Sbjct: 1726282 agagcttgttttgatttttc 1726301
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 289     agagcttgttttgatttttc 308
               ||||||||||||||||||||
Sbjct: 1864958 agagcttgttttgatttttc 1864977
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>gb|AC114925.6| Mus musculus BAC clone RP24-349O21 from 16, complete sequence
          Length = 150121

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   tgcaacagtttgggctgttt 585
             ||||||||||||||||||||
Sbjct: 95139 tgcaacagtttgggctgttt 95158
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 545     tgtaccagcttcatccatac 564
               ||||||||||||||||||||
Sbjct: 2457955 tgtaccagcttcatccatac 2457974
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>gb|AC157811.3| Mus musculus chromosome 1, clone RP24-377C24, complete sequence
          Length = 188752

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   tctcaagttagttgtcaggc 425
             ||||||||||||||||||||
Sbjct: 61903 tctcaagttagttgtcaggc 61922


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,257,957
Number of Sequences: 3902068
Number of extensions: 5257957
Number of successful extensions: 126120
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125795
Number of HSP's gapped (non-prelim): 320
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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