ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart28h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C72A1_CATRO (Q05047) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII... 61 2e-09
2CP134_DROME (Q9VG40) Probable cytochrome P450 313a4 (EC 1.14.-.-... 35 0.12
3CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-... 33 0.47
4CP133_DROME (Q9VGB3) Probable cytochrome P450 313a3 (EC 1.14.-.-... 32 1.0
5APBE_BUCBP (Q89AP6) Probable thiamine biosynthesis protein apbE ... 32 1.4
6CP132_DROME (Q9VGB4) Probable cytochrome P450 313a2 (EC 1.14.-.-... 31 1.8
7C97B1_PEA (Q43078) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) 31 1.8
8C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-) 31 2.3
9C97B3_ARATH (O23365) Cytochrome P450 97B3 (EC 1.14.-.-) 30 3.0
10FOXQ1_HUMAN (Q9C009) Forkhead box protein Q1 (Hepatocyte nuclear... 30 5.2
11CRIM1_CHICK (Q8AWW5) Cysteine-rich motor neuron 1 protein precur... 29 8.9

>C72A1_CATRO (Q05047) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin|
           synthase) (SLS)
          Length = 524

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = +1

Query: 151 RLVDYTWWRPXXXXXXXXXXXXXXTPYRFPVGDLGDYGRQGKEASSRALPLRCHDIRAHV 330
           R++D+ W+ P               PYRF VGD+ + G+  +EA S+ +    +DI   +
Sbjct: 26  RVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSKPMEFN-NDIVPRL 84

Query: 331 APYLYSTVLEHGKTCVSWFGPVPKVTIADPGVTREVM--SNKFGHFEKLQFPTLTRLLAG 504
            P++  T+  +G+   +W G +P++ + +P + +EV+  S+K+     +  P +  LL G
Sbjct: 85  MPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTG 144



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>CP134_DROME (Q9VG40) Probable cytochrome P450 313a4 (EC 1.14.-.-)|
           (CYPCCCXIIIA4)
          Length = 478

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +1

Query: 358 EHGKTCVSWFGPVPKVTIADPGVTREVMSN 447
           +HG T  SW GP+P + ++DP V +++ ++
Sbjct: 63  KHGPTIFSWLGPIPFMIVSDPQVVQDIFTS 92



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>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)|
           (CYPCCCXIIIA1)
          Length = 492

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 358 EHGKTCVSWFGPVPKVTIADPGVTREVMSNKFGH 459
           ++G T ++W GPVP +   DP V  ++ S+   H
Sbjct: 64  KYGSTILTWMGPVPFIVTRDPKVVEDIFSSPDCH 97



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>CP133_DROME (Q9VGB3) Probable cytochrome P450 313a3 (EC 1.14.-.-)|
           (CYPCCCXIIIA3)
          Length = 492

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 361 HGKTCVSWFGPVPKVTIADPGVTREV 438
           +G TC+ W GP P V   DP +  E+
Sbjct: 65  YGSTCLVWVGPTPFVITRDPKIAEEI 90



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>APBE_BUCBP (Q89AP6) Probable thiamine biosynthesis protein apbE precursor|
          Length = 341

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -2

Query: 491 LVSVGNWSFSKWPNLLDITSRVTPGSAMVTLGTGPNQETHVLPCSRTV 348
           L+S+G     K  NLLDITS    G+ +   G GP    H +P  +T+
Sbjct: 100 LISIGLLVGKKTNNLLDITS----GTLINIWGFGPTSRKHSIPSKKTI 143



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>CP132_DROME (Q9VGB4) Probable cytochrome P450 313a2 (EC 1.14.-.-)|
           (CYPCCCXIIIA2)
          Length = 493

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 358 EHGKTCVSWFGPVPKVTIADPGVTREVMSNKF 453
           +HG T ++W G  P V   DP +  +V+++ F
Sbjct: 64  KHGSTYMAWIGTTPIVITRDPKIAEKVLTSPF 95



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>C97B1_PEA (Q43078) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2)|
          Length = 552

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 340 LYSTVLEHGKTCVSWFGPVPKVTIADPGVTREVMSNKFGHFEK 468
           LY   LEHG      FGP   V ++DP V R ++      ++K
Sbjct: 107 LYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDK 149



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>C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)|
          Length = 576

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 340 LYSTVLEHGKTCVSWFGPVPKVTIADPGVTREVMSNKFGHFEK 468
           LY   LEHG      FGP   V ++DP V R ++      ++K
Sbjct: 98  LYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFSYDK 140



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>C97B3_ARATH (O23365) Cytochrome P450 97B3 (EC 1.14.-.-)|
          Length = 580

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 340 LYSTVLEHGKTCVSWFGPVPKVTIADPGVTREVMSNKFGHFEK 468
           LY   LEHG      FGP   V I+DP + R V+      ++K
Sbjct: 103 LYDWFLEHGGIYKLAFGPKAFVVISDPIIARHVLRENAFSYDK 145



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>FOXQ1_HUMAN (Q9C009) Forkhead box protein Q1 (Hepatocyte nuclear factor 3|
           forkhead homolog 1) (HNF-3/forkhead-like protein 1)
           (HFH-1)
          Length = 403

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 78  SAGEPHAGHGAMDPPGPGASLAG 146
           +A  P AG GA DPPG G   AG
Sbjct: 47  AANSPAAGGGARDPPGDGEQSAG 69



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>CRIM1_CHICK (Q8AWW5) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
          Length = 1048

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 56   KKQWFSSECWRAPRRPRC 109
            KKQW    C++AP +P C
Sbjct: 976  KKQWIPVSCYKAPTKPSC 993


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,786,075
Number of Sequences: 219361
Number of extensions: 994694
Number of successful extensions: 3400
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3396
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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