ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart28g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) 63 6e-10
2EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ... 62 7e-10
3CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146)... 62 1e-09
47OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1... 52 8e-07
5COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.1... 49 1e-05
66OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC... 42 0.001
74OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-meth... 36 0.057
8PUR6_YEAST (P21264) Phosphoribosylaminoimidazole carboxylase (EC... 34 0.28
9NOV_XENLA (P51609) Protein NOV homolog precursor (Xnov) 33 0.37
10PUR6_SYNY3 (Q55498) Phosphoribosylaminoimidazole carboxylase cat... 33 0.48
11PUR6_CANGA (O74197) Phosphoribosylaminoimidazole carboxylase (EC... 33 0.48
12MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Uro... 31 2.4
13PUR6_CANAL (Q92210) Phosphoribosylaminoimidazole carboxylase (EC... 30 3.1
14POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234... 30 3.1
15K1C12_HUMAN (Q99456) Keratin, type I cytoskeletal 12 (Cytokerati... 30 3.1
16POF2_SCHPO (O74783) F-box/LRR-repeat protein 2 (F-box and leucin... 30 4.1
17ATG4A_PONPY (Q5R699) Cysteine protease ATG4A (EC 3.4.22.-) (Auto... 30 4.1
18ATG4A_HUMAN (Q8WYN0) Cysteine protease ATG4A (EC 3.4.22.-) (Auto... 30 4.1
19SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor 30 5.3
20FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3 30 5.3
21SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei) 30 5.3
22PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor typ... 29 7.0
23Y1105_METKA (Q8TWD0) UPF0272 protein MK1105 29 9.1
24PUR6_DEBOC (P50504) Phosphoribosylaminoimidazole carboxylase (EC... 29 9.1
25SELD_SHEON (Q8EK99) Selenide, water dikinase (EC 2.7.9.3) (Selen... 29 9.1
26PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor t... 29 9.1
27ATKA_CAUCR (Q9A7X8) Potassium-transporting ATPase A chain (EC 3.... 29 9.1
28ATG4A_BOVIN (Q6PZ05) Cysteine protease ATG4A (EC 3.4.22.-) (Auto... 29 9.1

>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)|
          Length = 364

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
 Frame = +3

Query: 111 TEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKL 290
           T+  LL  Q +LW  +  +M SMA + A+ L I   IH  GGAASL  +++ + L P+++
Sbjct: 9   TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68

Query: 291 PYLRRIMRLLXXXXXXXX----XXXXXXXXXXYRLTPLSWLLLDGVAVDGHPSQTSLVLA 458
             LRR+MR+L                      Y LTP+S LL+   +     +QT L   
Sbjct: 69  SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIG--SQSSQLAQTPLAAM 126

Query: 459 ATSRHCLEAAMGLSDWFKKDV 521
                 +     L  WF+ ++
Sbjct: 127 VLDPTIVSPFSELGAWFQHEL 147



to top

>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol|
           O-methyltransferase EOMT1)
           (S-adenosysl-L-methionine:(Iso)eugenol
           O-methyltransferase EOMT1)
          Length = 357

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)
 Frame = +3

Query: 78  MATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDL 257
           MA Q   +++ TE +LLQ Q  +W H   +  SM+ +CA++LGIP  +H  G   +L  L
Sbjct: 1   MALQKVDISLSTE-QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQL 59

Query: 258 VAALSLPPAKLPYLRRIMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLL 407
           + ++ +   K    +R+MR L                  Y LTP S LLL
Sbjct: 60  LQSIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLL 109



to top

>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol|
           O-methyltransferase CVOMT1)
           (S-adenosysl-L-methionine:(Iso)eugenol
           O-methyltransferase CVOMT1)
          Length = 356

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 45/147 (30%), Positives = 66/147 (44%)
 Frame = +3

Query: 78  MATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDL 257
           MA Q   +++ TE +LLQ QA +W H   +  SM+ +CA++LGIP  +H      +L  L
Sbjct: 1   MALQNMDISLSTE-QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQL 59

Query: 258 VAALSLPPAKLPYLRRIMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLLDGVAVDGHPS 437
           + A+ +   K    +R+MR L                  Y LTP S LLL G  +   P 
Sbjct: 60  LKAIPINKEKSQSFQRLMRAL-VNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLTVAP- 117

Query: 438 QTSLVLAATSRHCLEAAMGLSDWFKKD 518
              LV              +S+WFK +
Sbjct: 118 ---LVQVVLDPTFTNPWHYMSEWFKHE 141



to top

>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)|
           (Isoflavone-O-methytransferase 9) (7 IOMT-9)
          Length = 352

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 26/68 (38%), Positives = 44/68 (64%)
 Frame = +3

Query: 117 AELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPY 296
           +E+ + QA L++H   ++ SM+ + AV + IP  IH+ G   SL +LV+ L +P +K+  
Sbjct: 11  SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70

Query: 297 LRRIMRLL 320
           +RR+MR L
Sbjct: 71  VRRLMRYL 78



to top

>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)|
          Length = 351

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
 Frame = +3

Query: 126 LQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPYLRR 305
           ++ QA +W+H   +  ++  +  V LGIP  IH+  G  +L  LV  L L    +     
Sbjct: 13  IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSIDRFHH 71

Query: 306 IMRLLXXXXXXXXXXXXXXXXXXYRLTPLSWLLLDG--------VAVDGHPSQTSL 449
            MR L                  Y LTP S LL+ G        V +  HP + S+
Sbjct: 72  FMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHPEEFSV 127



to top

>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)|
           (S-adenosyl-L-methionine:norcoclaurine
           6-O-methyltransferase) (6-OMT)
          Length = 347

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +3

Query: 126 LQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPYLRR 305
           L  QA LW     +  S+  +CAV+L +   IH+ G + +L +L + L   P     L R
Sbjct: 8   LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67

Query: 306 IMRLL 320
           +MR L
Sbjct: 68  VMRYL 72



to top

>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase|
           (EC 2.1.1.116)
           (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine
           4'-O-methyltransferase) (4'-OMT)
          Length = 350

 Score = 36.2 bits (82), Expect = 0.057
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 126 LQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALSLPPAKLPYLRR 305
           ++ QA +W+    +  S+  +CAV+LGI   I +     +L DL + L +       L R
Sbjct: 12  IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71

Query: 306 IMRLL 320
           I+R L
Sbjct: 72  ILRYL 76



to top

>PUR6_YEAST (P21264) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)|
           (AIR carboxylase) (AIRC)
          Length = 571

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 66  IKAAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAAS 245
           + +A     +   VP E  ++       R S Y ++      A K GI T I   GGAA 
Sbjct: 417 VMSAACAVLKDFGVPFEVTIVSAHRTPHRMSAYAIS------ASKRGIKTIIAGAGGAAH 470

Query: 246 LPDLVAALS-LPPAKLP 293
           LP +VAA++ LP   +P
Sbjct: 471 LPGMVAAMTPLPVIGVP 487



to top

>NOV_XENLA (P51609) Protein NOV homolog precursor (Xnov)|
          Length = 343

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = +1

Query: 232 VAQRRCPTWSPRCPFHPPSCLTSAA----SCGC 318
           VA ++CP+   +CP  PPSC  S       CGC
Sbjct: 16  VASQKCPSQCDQCPEEPPSCAPSVLLILDGCGC 48



to top

>PUR6_SYNY3 (Q55498) Phosphoribosylaminoimidazole carboxylase catalytic subunit|
           (EC 4.1.1.21) (AIR carboxylase) (AIRC)
          Length = 176

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 72  AAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLP 251
           AA     ++ AVPTE  ++       R   Y  T      A + G+   I   GGAA LP
Sbjct: 22  AAAIAVCEEFAVPTEVAIISAHRTPERMVEYAQT------AHQRGLRIIIAGAGGAAHLP 75

Query: 252 DLVAALS-LPPAKLP 293
            +VAAL+ LP   +P
Sbjct: 76  GMVAALTPLPVIGVP 90



to top

>PUR6_CANGA (O74197) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)|
           (AIR carboxylase) (AIRC)
          Length = 570

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = +3

Query: 66  IKAAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAAS 245
           + +A     +Q  VP E  ++      +R + Y         AV  GI   I   GGAA 
Sbjct: 416 VMSAACKMLEQFEVPFEVTIVSAHRTPYRMNKYASE------AVSRGIKVIIAGAGGAAH 469

Query: 246 LPDLVAALSLPP 281
           LP +VAA++  P
Sbjct: 470 LPGMVAAMTPVP 481



to top

>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase|
           receptor-associated protein) (Endocytic receptor 180)
           (CD280 antigen)
          Length = 1479

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2

Query: 200 LDGALECHGGHVVETVAPKVRLPLQKLRLCGDGQLLSLGRHCCL 69
           L G LE  GG V  T A    LP Q+ +     +L +LG   CL
Sbjct: 51  LQGCLEAQGGQVRVTPACNTSLPAQRWKWVSRNRLFNLGTMQCL 94



to top

>PUR6_CANAL (Q92210) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)|
           (AIR carboxylase) (AIRC)
          Length = 568

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +3

Query: 66  IKAAMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAAS 245
           + A  A   +Q  VP E  ++       R S Y +       A K G+   I   GGAA 
Sbjct: 411 VMAVGARILKQFGVPFELTIVSAHRTPHRMSEYAIE------APKRGLKCIIAGAGGAAH 464

Query: 246 LPDLVAALS-LPPAKLP 293
           LP +VAA++ LP   +P
Sbjct: 465 LPGMVAAMTPLPVIGVP 481



to top

>POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC 3
          Length = 2410

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 200 LDGALECHGGHVVETVAPKVRLPLQKLRLCGD 105
           +D A  CH G ++ T+A  +  P QK+ LCGD
Sbjct: 784 IDEAFSCHAGTLLATIA--IVRPKQKVVLCGD 813



to top

>K1C12_HUMAN (Q99456) Keratin, type I cytoskeletal 12 (Cytokeratin-12) (CK-12)|
           (Keratin-12) (K12)
          Length = 494

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = +3

Query: 75  AMATQAQQLAVPTEAELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPD 254
           A  +Q QQL    EA+LLQ +AD  R ++ +   +  +  ++L I T    L G A    
Sbjct: 382 AQLSQVQQLISNLEAQLLQVRADAERQNVDHQRLLNVKARLELEIETYRRLLDGEAQGDG 441

Query: 255 LVAALSLPPAK 287
           L  +L +  +K
Sbjct: 442 LEESLFVTDSK 452



to top

>POF2_SCHPO (O74783) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat|
           protein 2) (F-box protein pof2)
          Length = 463

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 120 ELLQGQADLWRHSLYYMTSMAFQCAVKLGIPTTIHSLGGAASLPDL-VAALSLPPAKLPY 296
           +L Q    L     Y +T +  QC +K     T    GG   L D+ V+A+    AKLPY
Sbjct: 300 KLSQSLTTLHLGHCYEITDIGVQCLLKSCKNITYIDFGGCLRLSDIAVSAI----AKLPY 355

Query: 297 LRRI 308
           L+R+
Sbjct: 356 LQRV 359



to top

>ATG4A_PONPY (Q5R699) Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related|
           protein 4 homolog A)
          Length = 398

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 124 SSASVGTAS-C*AWVAIAALITLPLGSSYVRSFYGDSLKQC 5
           S+ S GT++ C AW  +  ++ L LG + +   Y D+ K+C
Sbjct: 207 SNLSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKEC 247



to top

>ATG4A_HUMAN (Q8WYN0) Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related|
           protein 4 homolog A) (hAPG4A) (Autophagin-2)
           (Autophagy-related cysteine endopeptidase 2) (AUT-like 2
           cysteine endopeptidase)
          Length = 398

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 124 SSASVGTAS-C*AWVAIAALITLPLGSSYVRSFYGDSLKQC 5
           S+ S GT++ C AW  +  ++ L LG + +   Y D+ K+C
Sbjct: 207 SNQSKGTSAYCSAWKPLLLIVPLRLGINQINPVYVDAFKEC 247



to top

>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor|
          Length = 297

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 244 RCPTWSPRCPFHPPSCLTSAASC 312
           RC T +P+C   PP+C T   +C
Sbjct: 58  RCETTTPKCETTPPTCRTEPPTC 80



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 244 RCPTWSPRCPFHPPSCLTSAASC 312
           RC T  PRC   PP C T+   C
Sbjct: 44  RCETEPPRCETEPPRCETTTPKC 66



to top

>FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3|
          Length = 733

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 506 PVGEPHGSLKAVPRGCGEHKGGLARVAIYGDAVKEKP 396
           P   P G L+A+P G G H+G  +  A  GD+   +P
Sbjct: 25  PSSSPLGKLQALPIGPGAHRGAHSSSAPAGDSSTREP 61



to top

>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)|
          Length = 608

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 241 RRCPTWSPRCPFHPPSCLTSAASCGC 318
           +RC + SP C FHP S  TS  +  C
Sbjct: 60  QRCASTSPSCEFHPRSSSTSRNTYSC 85



to top

>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48) (His-domain-containing protein tyrosine
            phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14)
            (PTP-TD14) (Fragment)
          Length = 1499

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = +3

Query: 216  TIHSLGG----AASLPDLVAALSLPPAKLP 293
            +I  LGG    AASLP LV    LPPA LP
Sbjct: 1369 SIRPLGGLDSPAASLPSLVEPPGLPPASLP 1398



to top

>Y1105_METKA (Q8TWD0) UPF0272 protein MK1105|
          Length = 395

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 170 DLHGIPVRRQARHPDHHPQPGWRSVAARPGRRAVPSTR 283
           D+ GI V+       HH +P W  V  +  R + P TR
Sbjct: 337 DVDGIRVKVSRFEDVHHAKPEWEDVRRKVDRESAPLTR 374



to top

>PUR6_DEBOC (P50504) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)|
           (AIR carboxylase) (AIRC)
          Length = 557

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 168 MTSMAFQCAVKLGIPTTIHSLGGAASLPDLVAALS-LPPAKLP 293
           MT  A + A K G+   I   GGAA LP +VAA++ LP   +P
Sbjct: 436 MTQYAIE-APKRGLKVIIAGAGGAAHLPGMVAAMTPLPVIGVP 477



to top

>SELD_SHEON (Q8EK99) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate|
           synthetase) (Selenium donor protein)
          Length = 352

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 236 ATQAVDGGRDAELDGALECHGGHVVETVAP 147
           A Q VDGGR A ++  +   GGH ++   P
Sbjct: 124 AQQVVDGGRQACMEAGIMLAGGHSIDAPEP 153



to top

>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48)
          Length = 1692

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = +3

Query: 216  TIHSLGG----AASLPDLVAALSLPPAKLP 293
            +I  LGG    AASLP LV    LPPA LP
Sbjct: 1562 SIRPLGGLDSPAASLPGLVEPPGLPPASLP 1591



to top

>ATKA_CAUCR (Q9A7X8) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 570

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
 Frame = +3

Query: 63  VIKAAMATQAQQLAVPTEAELLQGQADLW----RHSLYYMTSMAFQCAV---KLGIPTTI 221
           V  A  AT A  LA    A   +G  + W    R +LY +  +AF  AV    LG+P T+
Sbjct: 143 VSAATGATVAAALARAFVANRGEGVGNFWADLVRTTLYLLLPLAFVVAVVLAALGLPQTL 202

Query: 222 ------HSLGGAASLPDLVAALSLPPAKL 290
                 H+L GA     L A  S    K+
Sbjct: 203 AAGVTAHTLEGAEQKISLYAVASQEAIKM 231



to top

>ATG4A_BOVIN (Q6PZ05) Cysteine protease ATG4A (EC 3.4.22.-) (Autophagy-related|
           protein 4 homolog A) (Autophagy-related cysteine
           endopeptidase 2A) (Autophagin-2A) (bAut2A)
          Length = 398

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 106 TASC*AWVAIAALITLPLGSSYVRSFYGDSLKQC 5
           +A C AW  +  ++ L LG + +   Y D+ K+C
Sbjct: 214 SACCTAWKPLLLIVPLRLGINQINPVYVDAFKEC 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,435,350
Number of Sequences: 219361
Number of extensions: 1237918
Number of successful extensions: 4576
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4572
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top