ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart28g02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016572.1| Zea mays clone Contig405 mRNA sequence Length = 1144 Score = 230 bits (116), Expect = 4e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 200 cggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggtggcggacctgg 259 |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| |||| Sbjct: 34 cggcggcgctcgcggtgacggacgaggtggccctgccgatccgggcggtgggggatctgg 93 Query: 260 cggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtgcgccacgctcg 319 |||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct: 94 cggccgccgccgaggtctcgcgggaggaggtcgccgtcatcacccagtgcgcggcgctcg 153 Query: 320 gtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcataaaaaatg 379 ||||||||||||||||||| || || || | ||| | |||||| | | ||| ||||| | Sbjct: 154 gtgggaagttgccttttgaagatgcatcagctggtgcggttcttgcagccattaaaaacg 213 Query: 380 tggagagctttggggataagttggttgctgaaattagccgagtgctgaaagctggtggaa 439 |||| ||||| |||| | |||||||||||||| || || ||||||||||||||||||| Sbjct: 214 tggaaagcttcagggagcaattggttgctgaaatcaggcgggtgctgaaagctggtggaa 273
>ref|XM_474324.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 204 bits (103), Expect = 2e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 189 ggcgacggctgcggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggt 248 |||||||| |||| ||||||||||||||||||||| |||||| ||||| | |||||||| Sbjct: 6 ggcgacggtggcggaggcgctcgcggtgacggacgaactggccttgccgcttcgcgcggt 65 Query: 249 ggcggacctggcggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtg 308 || ||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 66 gggggatctggcggccgccgcgggggtctcgcgggaggaggtggtggtcatcacgcagtg 125 Query: 309 cgccacgctcggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgt 368 |||| |||| ||||||||||| ||||||||||| || || || |||||||||||| |||| Sbjct: 126 cgcctcgcttggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgt 185 Query: 369 cat 371 ||| Sbjct: 186 cat 188 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 331 tttgttgacgtgcaagcttctgctgcaag 359
>dbj|AK102124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084O13, full insert sequence Length = 1379 Score = 204 bits (103), Expect = 2e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 189 ggcgacggctgcggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggt 248 |||||||| |||| ||||||||||||||||||||| |||||| ||||| | |||||||| Sbjct: 85 ggcgacggtggcggaggcgctcgcggtgacggacgaactggccttgccgcttcgcgcggt 144 Query: 249 ggcggacctggcggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtg 308 || ||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 145 gggggatctggcggccgccgcgggggtctcgcgggaggaggtggtggtcatcacgcagtg 204 Query: 309 cgccacgctcggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgt 368 |||| |||| ||||||||||| ||||||||||| || || || |||||||||||| |||| Sbjct: 205 cgcctcgcttggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgt 264 Query: 369 cat 371 ||| Sbjct: 265 cat 267 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 410 tttgttgacgtgcaagcttctgctgcaag 438
>ref|XM_474393.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 202 bits (102), Expect = 9e-49 Identities = 153/170 (90%) Strand = Plus / Plus Query: 202 gcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggtggcggacctggcg 261 ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||| Sbjct: 16 gcggcgctcgcggtgacggacgagctggcgttgccgctccgcgcggtgggggatctggcg 75 Query: 262 gccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtgcgccacgctcggt 321 |||||||| ||| |||||||||||||||| || |||||||||||||||||| |||| ||| Sbjct: 76 gccgccgcggggttctcgcgggaggaggtggtggtcatcacgcagtgcgcctcgcttggt 135 Query: 322 gggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 |||||||| ||||||||||| || || || |||||||||||| ||||||| Sbjct: 136 gggaagttaccttttgatgatgcatcagttggttctgttcttgctgtcat 185 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 328 tttgttgacgtgcaagcttctgctgcaag 356
>gb|AY110043.1| Zea mays CL5496_1 mRNA sequence Length = 1258 Score = 194 bits (98), Expect = 2e-46 Identities = 202/240 (84%) Strand = Plus / Plus Query: 200 cggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggtggcggacctgg 259 |||||||||||||||||||||||||| |||||||||||||||| ||||| | |||| Sbjct: 74 cggcggcgctcgcggtgacggacgaggtggccctgccgatccgggcggtnnnnnatctgg 133 Query: 260 cggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtgcgccacgctcg 319 |||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct: 134 cggccgccgccgaggtctcgcgggaggaggtcgccgtcatcacccagtgcgcggcgctcg 193 Query: 320 gtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcataaaaaatg 379 ||||||||||||||||||| || || || || ||| | |||||| | ||||| | Sbjct: 194 gtgggaagttgccttttgaagatgcatcagttggtgcggttcttgcagtcattnnnnncg 253 Query: 380 tggagagctttggggataagttggttgctgaaattagccgagtgctgaaagctggtggaa 439 |||| ||||| |||| | |||||||||||||| || || ||||||||||||||||||| Sbjct: 254 tggaaagcttgagggagcaattggttgctgaaatcagtcgggtgctgaaagctggtggaa 313
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 170 bits (86), Expect = 3e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 189 ggcgacggctgcggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggt 248 ||||||||| |||||||||||||||||||||||||| |||||| ||||| | |||||||| Sbjct: 80299 ggcgacggcggcggcggcgctcgcggtgacggacgaactggccttgccgcttcgcgcggt 80358 Query: 249 ggcggacctggcggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtg 308 || ||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 80359 gggggatctggcggccgccgcgggggtctcgcgggaggaggtggtggtcatcacgcagtg 80418 Query: 309 cgccacgctcggtg 322 |||| |||| |||| Sbjct: 80419 cgcctcgcttggtg 80432 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 319 ggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 ||||||||||||||||||| ||| || || || |||||||||||| ||||||| Sbjct: 81068 ggtgggaagttgccttttgctgatgcatcagttggttctgttcttgctgtcat 81120 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 487 aattatatcgagcgccagctactcatgggtggttttgttgaagtgcaagcttctgctaca 546 |||| ||| |||||| ||||||| | || || |||||||| ||||||||||||||| || Sbjct: 81309 aattctattgagcgcaagctactgttaggaggatttgttgacgtgcaagcttctgctgca 81368 Query: 547 ag 548 || Sbjct: 81369 ag 81370
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 189 ggcgacggctgcggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggt 248 |||||||| |||| ||||||||||||||||||||| |||||| ||||| | |||||||| Sbjct: 76466 ggcgacggtggcggaggcgctcgcggtgacggacgaactggccttgccgcttcgcgcggt 76525 Query: 249 ggcggacctggcggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtg 308 || ||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 76526 gggggatctggcggccgccgcgggggtctcgcgggaggaggtggtggtcatcacgcagtg 76585 Query: 309 cgccacgctcggtg 322 |||| |||| |||| Sbjct: 76586 cgcctcgcttggtg 76599 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 319 ggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 ||||||||||| ||||||||||| || || || |||||||||||| ||||||| Sbjct: 77245 ggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgtcat 77297 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 77520 tttgttgacgtgcaagcttctgctgcaag 77548
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 189 ggcgacggctgcggcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggt 248 |||||||| |||| ||||||||||||||||||||| |||||| ||||| | |||||||| Sbjct: 34458981 ggcgacggtggcggaggcgctcgcggtgacggacgaactggccttgccgcttcgcgcggt 34459040 Query: 249 ggcggacctggcggccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtg 308 || ||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 34459041 gggggatctggcggccgccgcgggggtctcgcgggaggaggtggtggtcatcacgcagtg 34459100 Query: 309 cgccacgctcggtg 322 |||| |||| |||| Sbjct: 34459101 cgcctcgcttggtg 34459114 Score = 153 bits (77), Expect = 7e-34 Identities = 110/121 (90%) Strand = Plus / Minus Query: 202 gcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggtggcggacctggcg 261 ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||| Sbjct: 34858017 gcggcgctcgcggtgacggacgagctggcgttgccgctccgcgcggtgggggatctggcg 34857958 Query: 262 gccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtgcgccacgctcggt 321 |||||||| ||| |||||||||||||||| || |||||||||||||||||| |||| ||| Sbjct: 34857957 gccgccgcggggttctcgcgggaggaggtggtggtcatcacgcagtgcgcctcgcttggt 34857898 Query: 322 g 322 | Sbjct: 34857897 g 34857897 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 319 ggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 ||||||||||| ||||||||||| || || || |||||||||||| ||||||| Sbjct: 34857248 ggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgtcat 34857196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 319 ggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 ||||||||||| ||||||||||| || || || |||||||||||| ||||||| Sbjct: 34459760 ggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgtcat 34459812 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 34856973 tttgttgacgtgcaagcttctgctgcaag 34856945 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 34460035 tttgttgacgtgcaagcttctgctgcaag 34460063
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 153 bits (77), Expect = 7e-34 Identities = 110/121 (90%) Strand = Plus / Minus Query: 202 gcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggtggcggacctggcg 261 ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||| Sbjct: 64130 gcggcgctcgcggtgacggacgagctggcgttgccgctccgcgcggtgggggatctggcg 64071 Query: 262 gccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtgcgccacgctcggt 321 |||||||| ||| |||||||||||||||| || |||||||||||||||||| |||| ||| Sbjct: 64070 gccgccgcggggttctcgcgggaggaggtggtggtcatcacgcagtgcgcctcgcttggt 64011 Query: 322 g 322 | Sbjct: 64010 g 64010 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 319 ggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 ||||||||||| ||||||||||| || || || |||||||||||| ||||||| Sbjct: 63361 ggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgtcat 63309 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 63086 tttgttgacgtgcaagcttctgctgcaag 63058
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 153 bits (77), Expect = 7e-34 Identities = 110/121 (90%) Strand = Plus / Minus Query: 202 gcggcgctcgcggtgacggacgagctggccctgccgatccgcgcggtggcggacctggcg 261 |||||||||||||||||||||||||| || ||||| |||||||||||| ||| |||||| Sbjct: 37663 gcggcgctcgcggtgacggacgagctagcgttgccgctccgcgcggtgggggatctggcg 37604 Query: 262 gccgccgccggggtctcgcgggaggaggtcgtcgtcatcacgcagtgcgccacgctcggt 321 |||||||| |||||||||||||||||||| || |||||||||||||||||| |||| ||| Sbjct: 37603 gccgccgcgggggtctcgcgggaggaggtggtggtcatcacgcagtgcgcctcgcttggt 37544 Query: 322 g 322 | Sbjct: 37543 g 37543 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 319 ggtgggaagttgccttttgatgacgcgtccgtgggttctgttctttctgtcat 371 ||||||||||| ||||||||||| || || || |||||||||||| ||||||| Sbjct: 36894 ggtgggaagttaccttttgatgatgcatcagttggttctgttcttgctgtcat 36842 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 tttgttgaagtgcaagcttctgctacaag 548 |||||||| ||||||||||||||| |||| Sbjct: 36619 tttgttgacgtgcaagcttctgctgcaag 36591
>gb|U62631.2|HSU62631 Human B-cell receptor CD22-B isoform and alternatively spliced B-cell receptor CD22-A isoform (CD22) gene, complete cds, complete sequence Length = 34791 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||||||| ||||||| Sbjct: 16568 tttcctcctcctcttcttcccctcctcctc 16597
>dbj|AB013004.1| Homo sapiens CD22 gene variant 10, partial cds Length = 480 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||||||| ||||||| Sbjct: 428 tttcctcctcctcttcttcccctcctcctc 457
>dbj|AB013003.1| Homo sapiens CD22 gene variant 9, partial cds Length = 480 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||||||| ||||||| Sbjct: 428 tttcctcctcctcttcttcccctcctcctc 457
>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence Length = 225829 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 30220 atccatcaacccatccatccatcc 30243
>emb|CR936500.10| Zebrafish DNA sequence from clone DKEY-274N8 in linkage group 3, complete sequence Length = 86479 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgttt 66 ||||||| |||||||||||||||||||| Sbjct: 54337 atccatccacccatccatccatccgttt 54310 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgttt 66 ||||||| | |||||||||||||||||| Sbjct: 54612 atccatccatccatccatccatccgttt 54585
>emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 in linkage group 13, complete sequence Length = 180933 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 75405 atccatcaacccatccatccatcc 75382 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatcc 62 ||||||||||||||||||||||| Sbjct: 73677 tccatcaacccatccatccatcc 73655 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 atcaacccatccatccatcc 62 |||||||||||||||||||| Sbjct: 75196 atcaacccatccatccatcc 75177
>emb|BX005211.21| Zebrafish DNA sequence from clone CH211-128A7 in linkage group 14, complete sequence Length = 191332 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 84312 atccatcaacccatccatccatcc 84335
>emb|CR392344.7| Zebrafish DNA sequence from clone CH211-239D11 in linkage group 20 Contains the 3' end of the gene for a novel protein similar to vertebrate X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining; Ku autoantigen, 80kDa) (XRCC5), the gene for a novel protein similar to vertebrate SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily a-like 1 (SMARCAL1), two novel genes and three CpG islands, complete sequence Length = 150882 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgttt 66 ||||||| |||||||||||||||||||| Sbjct: 38857 atccatccacccatccatccatccgttt 38884 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgttt 66 ||||||| | |||||||||||||||||| Sbjct: 39930 atccatccatccatccatccatccgttt 39957 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 39758 atccatccacccatccatccatcc 39781 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgttt 66 ||||||| |||||| ||||||||||||| Sbjct: 39224 atccatccacccatacatccatccgttt 39251
>gb|AC126615.7| Homo sapiens 12 BAC RP11-129B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67557 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 48723 atccatcaacccatccatccatcc 48700
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 128310 atccatcaacccatccatccatcc 128287 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatcc 58 |||||||||||||||||||| Sbjct: 128576 atccatcaacccatccatcc 128557 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatcc 58 |||||||||||||||||||| Sbjct: 128439 atccatcaacccatccatcc 128420
>gb|AC060771.8| Homo sapiens chromosome 17, clone RP11-169I9, complete sequence Length = 138969 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgttt 66 ||||||| |||||||||||||||||||| Sbjct: 65119 atccatccacccatccatccatccgttt 65092
>emb|BX323835.9| Zebrafish DNA sequence from clone DKEYP-22F6 in linkage group 14, complete sequence Length = 172378 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 78797 atccatcaacccatccatccatcc 78820
>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence Length = 159064 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 125508 atccatcaacccatccatccatcc 125531 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatcc 58 |||||||||||||||||||| Sbjct: 125375 atccatcaacccatccatcc 125394 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatcc 58 |||||||||||||||||||| Sbjct: 125238 atccatcaacccatccatcc 125257
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 165146 atccatcaacccatccatccatcc 165123 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatcc 58 |||||||||||||||||||| Sbjct: 165416 atccatcaacccatccatcc 165397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatcc 58 |||||||||||||||||||| Sbjct: 165279 atccatcaacccatccatcc 165260
>gb|AC087061.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-140e19, complete sequence Length = 202764 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||||| ||||||| Sbjct: 82464 tcctcctcctcttcttcccctcctcctc 82491
>emb|BX000984.7| Zebrafish DNA sequence from clone CH211-157C7, complete sequence Length = 160029 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 37 agatccatcaacccatccatccatccgtttta 68 ||||||||| |||||||||||||||| ||||| Sbjct: 99147 agatccatccacccatccatccatccatttta 99116
>emb|BX950195.14| Zebrafish DNA sequence from clone CH211-232M10 in linkage group 19, complete sequence Length = 149624 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 |||||||||||||||||||||||| Sbjct: 145998 atccatcaacccatccatccatcc 146021
>gb|AC074311.28| Mus musculus strain C57BL/6J chromosome 1 clone rp23-157j4, complete sequence Length = 185871 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 tcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||||| ||||||| Sbjct: 11744 tcctcctcctcttcttcccctcctcctc 11717
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 tccatcaacccatccatccatcc 62 ||||||||||||||||||||||| Sbjct: 158426 tccatcaacccatccatccatcc 158448 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 158733 atccatccacccatccatccatcc 158756
>gb|AC148006.4| Mus musculus BAC clone RP23-298P21 from chromosome 19, complete sequence Length = 209327 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 13493 atccatcaacccatccatccatc 13471 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 13469 atccatcaatccatccatccatcc 13446
>gb|AC121935.3| Mus musculus BAC clone RP24-207G22 from chromosome 19, complete sequence Length = 158540 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 73321 atccatcaacccatccatccatc 73343 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 73345 atccatcaatccatccatccatcc 73368
>emb|CR536619.20| Zebrafish DNA sequence from clone CH211-194H19 in linkage group 16, complete sequence Length = 179375 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgttttac 69 ||||||| | ||||||||||||||||||||| Sbjct: 176021 atccatccatccatccatccatccgttttac 175991
>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence Length = 188704 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 95565 atccatcaacccatccatccatc 95543 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccat 60 |||||||||||||||||||||| Sbjct: 95797 atccatcaacccatccatccat 95776 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccat 60 |||||||||||||||||||||| Sbjct: 95717 atccatcaacccatccatccat 95696 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccat 60 |||||||||||||||||||||| Sbjct: 95637 atccatcaacccatccatccat 95616
>emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in linkage group 5, complete sequence Length = 155089 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtt 65 ||||||| ||||||||||||||||||| Sbjct: 111648 atccatccacccatccatccatccgtt 111674
>emb|AL354836.13| Human DNA sequence from clone RP11-157P1 on chromosome 20 Contains the LAMA5 gene for laminin alpha 5 (KIAA0533), the GP110 gene for cell membrane glycoprotein (surface antigen), 110000M(r), the KIAA0772 gene with similarity to the gene for oxysterol-binding protein and two putative novel genes, complete sequence Length = 141056 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 10 cctcctcctcttcttccccgcctcctc 36 ||||||||||||||||||| ||||||| Sbjct: 82744 cctcctcctcttcttccccccctcctc 82718
>emb|AL137850.12| Human DNA sequence from clone RP11-56P10 on chromosome 9q31.3-33.3 Contains the 3' end of the gene for a novel C2H2 type zinc finger protein, the AMBP gene for alpha-1-microglobulin/bikunin precursor, the gene for a novel protein similar to mouse kinesin 12 (LOC113220) and two CpG islands, complete sequence Length = 125842 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 116981 atccatcaacccatccatccatc 116959
>emb|BX510998.12| Zebrafish DNA sequence from clone CH211-272L18 in linkage group 12, complete sequence Length = 148753 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtt 65 ||||||||| ||||||||||||||||| Sbjct: 12455 atccatcaatccatccatccatccgtt 12481 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 tccatcaacccatccatccatccgt 64 ||||||||||||||||||| ||||| Sbjct: 15678 tccatcaacccatccatccgtccgt 15702
>gb|AC119396.3| Homo sapiens chromosome 19 clone CTB-133G6, complete sequence Length = 72539 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatcc 62 ||||||||||||||||||||||| Sbjct: 30040 tccatcaacccatccatccatcc 30018 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatc 61 |||||||||||||||||||||| Sbjct: 30385 tccatcaacccatccatccatc 30364
>gb|BC113744.1| Homo sapiens cDNA clone IMAGE:5762826, with apparent retained intron Length = 3296 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 36 cagatccatcaacccatccatccatcc 62 |||||||||| |||||||||||||||| Sbjct: 2118 cagatccatccacccatccatccatcc 2092
>gb|AC157322.5| Mus musculus chromosome 19, clone RP23-241E11, complete sequence Length = 201134 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 158602 atccatcaacccatccatccatc 158580 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 158578 atccatcaatccatccatccatcc 158555
>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190805 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatcc 62 ||||||||||||||||||||||| Sbjct: 134899 tccatcaacccatccatccatcc 134877
>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence Length = 162342 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 103824 atccatcaacccatccatccatc 103846 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 105021 atccatccacccatccatccatcc 105044 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 103502 atccatcaatccatccatccatcc 103525 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 ccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||| Sbjct: 103049 ccatcaatccatccatccatccgt 103072
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttccccg 29 ||||||||||||||||||||||| Sbjct: 31092710 tttcctcctcctcttcttccccg 31092688 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 atggcgacggctgcggcggc 206 |||||||||||||||||||| Sbjct: 10398218 atggcgacggctgcggcggc 10398199 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 5706681 tcctcctcctcttcttcccc 5706662
>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence Length = 179941 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 62352 atccatcaacccatccatccatc 62374
>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence Length = 208477 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 42467 atccatcaacccatccatccatc 42489
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttccccg 29 ||||||||||||||||||||||| Sbjct: 149689 tttcctcctcctcttcttccccg 149667
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttccccg 29 ||||||||||||||||||||||| Sbjct: 19055 tttcctcctcctcttcttccccg 19033
>gb|AC098874.6| Homo sapiens BAC clone RP11-1299G23 from 2, complete sequence Length = 136367 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtt 65 ||||||| ||||||||||||||||||| Sbjct: 18948 atccatctacccatccatccatccgtt 18922
>emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 in linkage group 5, complete sequence Length = 168064 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtt 65 ||||||| ||||||||||||||||||| Sbjct: 20799 atccatccacccatccatccatccgtt 20773
>dbj|AK101026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150E15, full insert sequence Length = 3313 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttccccg 29 ||||||||||||||||||||||| Sbjct: 42 tttcctcctcctcttcttccccg 20
>dbj|AP000879.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-805J14, complete sequence Length = 169725 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 44936 atccatcaacccatccatccatc 44914 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatc 61 ||||||||||||||||||||||| Sbjct: 44800 atccatcaacccatccatccatc 44778 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 120827 atccatccacccatccatccatcc 120804
>gb|AC144802.3| Mus musculus BAC clone RP24-222O23 from 10, complete sequence Length = 154807 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatcc 62 ||||||||||||||||||||||| Sbjct: 10705 tccatcaacccatccatccatcc 10683
>dbj|AP003501.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-664I21, complete sequence Length = 186971 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 36 cagatccatcaacccatccatccatcc 62 |||||||||| |||||||||||||||| Sbjct: 13976 cagatccatccacccatccatccatcc 13950
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttcccc 28 |||||||||||||||||||||| Sbjct: 135560 tttcctcctcctcttcttcccc 135581
>gb|AC005361.1| Homo sapiens chromosome 16, cosmid clone 352F10 (LANL), complete sequence Length = 35677 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ccatcaacccatccatccatcc 62 |||||||||||||||||||||| Sbjct: 4666 ccatcaacccatccatccatcc 4687
>gb|AC015909.14| Homo sapiens chromosome 17, clone RP11-893F2, complete sequence Length = 217746 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 ctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| ||||||| Sbjct: 112973 ctcctcctcttcttcccctcctcctc 112998
>emb|AL359960.23| Human DNA sequence from clone RP11-298K24 on chromosome 10, complete sequence Length = 69113 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 30868 atccatccacccatccatccatccgt 30893
>emb|AL672311.26| Human DNA sequence from clone RP13-167H21 on chromosome X, complete sequence Length = 115998 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgt 64 ||||||||| |||||||||||||||| Sbjct: 113389 atccatcaatccatccatccatccgt 113414
>emb|AL591916.8| Human DNA sequence from clone RP11-168B8 on chromosome 1 Contains the 5' end of a novel gene (FLJ36179), complete sequence Length = 159159 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ccatcaacccatccatccatcc 62 |||||||||||||||||||||| Sbjct: 35958 ccatcaacccatccatccatcc 35979 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 35868 catcaacccatccatccatcc 35888 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 35713 atccatcaatccatccatccatcc 35736
>emb|AL137077.31| Human DNA sequence from clone RP11-11M20 on chromosome 20 Contains the 5' end of the TAF4 gene for TAF4 RNA polymerase II (TATA box binding protein (TBP)-associated factor, 135 kDa), an RPL17 (ribosomal protein L17) pseudogene, the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and two CpG islands, complete sequence Length = 126712 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 97660 atccatcgacccatccatccatccgt 97635 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 97780 atccatctacccatccatccatcc 97757
>emb|AL137248.21| Human DNA sequence from clone RP11-316G23 on chromosome 13q12.1-12.3, complete sequence Length = 186343 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ccatcaacccatccatccatcc 62 |||||||||||||||||||||| Sbjct: 8916 ccatcaacccatccatccatcc 8937
>emb|AL137251.5| Human DNA sequence from clone RP1-141N5 on chromosome 6 Contains the 3' end of the gene for KIAA1913 protein, complete sequence Length = 122354 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 tgtcataaaaaatgtggagagctttg 391 ||||||||||||||||||| |||||| Sbjct: 38184 tgtcataaaaaatgtggagtgctttg 38209
>emb|AL118522.32|HSDJ781B1 Human DNA sequence from clone RP4-781B1 on chromosome 20 Contains the 5' end of a novel gene, the KCNK15 gene for potassium channel subfamily K member 15, a novel gene, the RIMS4 gene for regulating synaptic membrane exocytosis 4 and three CpG islands, complete sequence Length = 107109 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 26342 atccatccacccatccatccatccgt 26367
>emb|AL079339.11|HSJ906P16 Human DNA sequence from clone RP5-906P16 on chromosome 20q13.12-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 86719 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ccatcaacccatccatccatcc 62 |||||||||||||||||||||| Sbjct: 64465 ccatcaacccatccatccatcc 64444 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 64389 catcaacccatccatccatcc 64369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 64286 catcaacccatccatccatcc 64266
>gb|AC160401.8| Mus musculus 10 BAC RP23-244J10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169912 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttcccc 28 |||||||||||||||||||||| Sbjct: 38309 tttcctcctcctcttcttcccc 38288
>gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, complete sequence Length = 160557 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ccatcaacccatccatccatcc 62 |||||||||||||||||||||| Sbjct: 45572 ccatcaacccatccatccatcc 45593 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 30294 atccatccacccatccatccatcc 30271 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 30158 atccatccacccatccatccatcc 30135
>gb|AC016587.9| Homo sapiens chromosome 19 clone CTD-2632B17, complete sequence Length = 155221 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 61362 atccatccacccatccatccatccgt 61337 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 60248 atccatctacccatccatccatcc 60225
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 agatccatcaacccatccatccatccgttt 66 ||||||||| | |||||||||||||||||| Sbjct: 30014 agatccatctatccatccatccatccgttt 30043
>gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complete sequence Length = 162461 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 gggatttcctcctcctcttctt 24 |||||||||||||||||||||| Sbjct: 158717 gggatttcctcctcctcttctt 158696
>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9, complete sequence Length = 178929 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccat 60 |||||||||||||||||||||| Sbjct: 147886 atccatcaacccatccatccat 147907
>emb|BX510911.10| Zebrafish DNA sequence from clone CH211-150K17 in linkage group 10, complete sequence Length = 140584 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||||| |||||||||||||||| Sbjct: 93378 atccatcaatccatccatccatccgt 93353
>gb|AC023708.4| Drosophila melanogaster X BAC RP98-12B22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175355 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 agatccatcaacccatccatccatccgttt 66 ||||||||| | |||||||||||||||||| Sbjct: 168172 agatccatctatccatccatccatccgttt 168201
>gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete sequence Length = 206400 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 ctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| ||||||| Sbjct: 68063 ctcctcctcttcttcccctcctcctc 68038 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 ctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| ||||||| Sbjct: 68024 ctcctcctcttcttcccctcctcctc 67999
>gb|AY027562.1| Rattus norvegicus SHR/OlaIpcv endothelial-derived lipase gene, partial cds Length = 1165 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttcccc 28 |||||||||||||||||||||| Sbjct: 567 tttcctcctcctcttcttcccc 588
>gb|AY027561.1| Rattus norvegicus BN-Lx/Cub endothelial-derived lipase gene, partial cds Length = 1165 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttcccc 28 |||||||||||||||||||||| Sbjct: 567 tttcctcctcctcttcttcccc 588
>gb|AC037473.7|AC037473 Homo sapiens chromosome 18, clone CTD-2130O13, complete sequence Length = 126976 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ccatcaacccatccatccatcc 62 |||||||||||||||||||||| Sbjct: 66177 ccatcaacccatccatccatcc 66156
>dbj|AK037755.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130047A17 product:hypothetical protein, full insert sequence Length = 1477 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 1311 atccatccacccatccatccatccgt 1286
>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216621 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttccccgcctcctc 36 ||||||||||||||||||| || ||||||| Sbjct: 158941 tttcctcctcctcttcttctcctcctcctc 158912
>emb|BX005074.10| Zebrafish DNA sequence from clone CH211-146J7 in linkage group 8, complete sequence Length = 153989 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtttta 68 ||||||| | |||||||||||||||||||| Sbjct: 125823 atccatccatccatccatccatccgtttta 125794
>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226168 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttccccgcctcctc 36 ||||||||||||||||||| || ||||||| Sbjct: 161814 tttcctcctcctcttcttctcctcctcctc 161785
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 cgcgcggtggcggacctggcggccgc 266 ||||||||||||||||| |||||||| Sbjct: 1786549 cgcgcggtggcggacctcgcggccgc 1786574
>gb|AC102738.9| Mus musculus chromosome 3, clone RP24-303G10, complete sequence Length = 166697 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatc 61 |||||||||||||||||||||| Sbjct: 61944 tccatcaacccatccatccatc 61923
>emb|BX248418.16| Zebrafish DNA sequence from clone DKEY-181I3 in linkage group 20, complete sequence Length = 152757 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgt 64 ||||||||| |||||||||||||||| Sbjct: 110838 atccatcaatccatccatccatccgt 110863
>emb|CR847568.13| Zebrafish DNA sequence from clone DKEYP-74C2 in linkage group 3, complete sequence Length = 173689 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttta 68 ||||||| | |||||||||||||||||||| Sbjct: 9596 atccatccatccatccatccatccgtttta 9625 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 9912 atccatccatccatccatccatccgtttt 9940 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 9751 atccatccatccatccatccatccgtttt 9779
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 agatccatcaacccatccatccatccgttt 66 ||||||||| | |||||||||||||||||| Sbjct: 71901 agatccatctatccatccatccatccgttt 71930
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 7716 atccatccacccatccatccatccgt 7691
>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179734 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttcccc 28 |||||||||||||||||||||| Sbjct: 7934 tttcctcctcctcttcttcccc 7955
>emb|CR848750.27| Zebrafish DNA sequence from clone RP71-4B23 in linkage group 15, complete sequence Length = 148714 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgttttaccat 72 ||||||| | ||||||||||||||||||| |||| Sbjct: 88459 atccatccatccatccatccatccgtttttccat 88426 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 88809 atccatccacccatccatccatcc 88786
>emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in linkage group 7, complete sequence Length = 205682 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgt 64 ||||||||| |||||||||||||||| Sbjct: 167625 atccatcaatccatccatccatccgt 167650
>dbj|AP000248.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:P289H18, complete sequence Length = 146847 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 89800 atccatccacccatccatccatccgt 89775
>dbj|AP000210.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 8/12, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 20704 atccatccacccatccatccatccgt 20679
>emb|AL596062.13| Mouse DNA sequence from clone RP23-284O21 on chromosome 11, complete sequence Length = 155151 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgt 64 ||||||| |||||||||||||||||| Sbjct: 152348 atccatccacccatccatccatccgt 152323
>emb|AL731720.7| Mouse DNA sequence from clone RP23-132E9 on chromosome 11, complete sequence Length = 23152 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 tttcctcctcctcttcttcccc 28 |||||||||||||||||||||| Sbjct: 19170 tttcctcctcctcttcttcccc 19149
>emb|AL645640.14| Mouse DNA sequence from clone RP23-228G24 on chromosome 4, complete sequence Length = 91413 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttccc 27 |||||||||||||||||||||| Sbjct: 77996 atttcctcctcctcttcttccc 77975
>gb|AC114617.16| Mus musculus chromosome 5, clone RP24-84E3, complete sequence Length = 200977 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||| |||||||||||| ||||||| Sbjct: 105021 ttcctccttctcttcttcccctcctcctc 104993
>gb|AC167017.4| Mus musculus BAC clone RP24-86L13 from chromosome 9, complete sequence Length = 183068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 77226 ttcctcctcctcttcttcccc 77246
>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence Length = 143851 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 141381 atttcctcctcctcttcttcc 141401 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 30205 tcctcctcctcttcttcccc 30224
>gb|AC154039.17| Mus musculus 10 BAC RP23-282M20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210923 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||||||| Sbjct: 8942 tcctcctcttcttcccctcctcctc 8918
>ref|XM_469885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 297 ttcctcctcctcttcttcccc 277
>ref|XM_518333.1| PREDICTED: Pan troglodytes similar to TNFalpha-inducible ATP-binding protein (LOC462543), mRNA Length = 2398 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 601 ttcctcctcctcttcttcccc 581
>gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, complete sequence Length = 176668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 63530 atttcctcctcctcttcttcc 63510
>gb|AC160028.9| Mus musculus 10 BAC RP24-570M12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 223055 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||||||| Sbjct: 196407 tcctcctcttcttcccctcctcctc 196383
>gb|AY830944.1| Poecilia reticulata microsatellite Pre17 sequence Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| |||||||||||||||| |||| Sbjct: 245 atccatccacccatccatccatccatttt 273
>gb|AC165953.3| Mus musculus BAC clone RP24-75N14 from chromosome 17, complete sequence Length = 224622 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 73072 catcaacccatccatccatcc 73052
>gb|AC154760.2| Mus musculus BAC clone RP24-414E6 from chromosome 14, complete sequence Length = 163089 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 88284 ttcctcctcctcttcttcccc 88304 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 87987 ttcctcctcctcttcttcccc 88007 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 88424 tcctcctcctcttcttcccc 88443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 88186 tcctcctcctcttcttcccc 88205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 88075 tcctcctcctcttcttcccc 88094 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 88027 tcctcctcctcttcttcccc 88046
>gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosome 16, complete sequence Length = 190523 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 72488 ttcctcctcctcttcttcccc 72468
>gb|AC100427.25| Mus musculus chromosome 10, clone RP23-136J15, complete sequence Length = 206339 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 59681 ttcctcctcctcttcttcccc 59661 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 59600 ttcctcctcctcttcttcccc 59580 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 59534 ttcctcctcctcttcttcccc 59514 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 59510 ttcctcctcctcttcttcccc 59490
>gb|AC114459.6| Rattus norvegicus 4 BAC CH230-388N23 (Children's Hospital Oakland Research Institute) complete sequence Length = 190345 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||| ||||||| Sbjct: 173514 ttcctcctcctcttctttccctcctcctc 173486
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 80789 ttcctcctcctcttcttcccc 80809
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 151860 ttcctcctcctcttcttcccc 151880
>gb|AC139580.4| Mus musculus BAC clone RP23-110M15 from chromosome 13, complete sequence Length = 205480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 194229 catcaacccatccatccatcc 194209
>ref|XM_955032.1| Neurospora crassa OR74A hypothetical protein (NCU09786.1) partial mRNA Length = 1278 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttccccg 29 ||||||||||||||||||||| Sbjct: 535 tcctcctcctcttcttccccg 555
>ref|XM_330435.1| Neurospora crassa OR74A hypothetical protein (NCU09786.1) partial mRNA Length = 1278 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttccccg 29 ||||||||||||||||||||| Sbjct: 535 tcctcctcctcttcttccccg 555
>ref|NM_173593.3| Homo sapiens beta-1,4-N-acetyl-galactosaminyl transferase 3 (B4GALNT3), mRNA Length = 3438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1845 ttcctcctcctcttcttcccc 1825
>gb|AC133968.3| Mus musculus BAC clone RP23-60J24 from chromosome 18, complete sequence Length = 206569 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||||||| Sbjct: 73941 tcctcctcttcttcccctcctcctc 73965
>gb|AC131099.4| Mus musculus BAC clone RP23-15N12 from chromosome 13, complete sequence Length = 208298 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 96555 ttcctcctcctcttcttcccc 96575
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tcacgcagtgcgccacgctcg 319 ||||||||||||||||||||| Sbjct: 2970940 tcacgcagtgcgccacgctcg 2970920
>ref|NM_001025091.1| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 1, mRNA Length = 3474 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 815 ttcctcctcctcttcttcccc 795
>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence Length = 235471 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 218705 ttcctcctcctcttcttcccc 218725
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 31319456 ttcctcctcctcttcttcccc 31319436 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 cctcctcttcttccccgcctcctc 36 |||||||||||||||| ||||||| Sbjct: 18432835 cctcctcttcttcccctcctcctc 18432858
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 21183 atttcctcctcctcttcttcc 21163
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 45208 ttcctcctcctcttcttctcctcctcctc 45180
>gb|AC093734.3| Homo sapiens BAC clone RP11-16P10 from 7, complete sequence Length = 114085 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccg 63 ||||||| ||||||||||||||||| Sbjct: 84110 atccatccacccatccatccatccg 84134 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 113137 tcctcctcctcttcttcccc 113156 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 84434 atccatccacccatccatccatcc 84457 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 84306 atccatccacccatccatccatcc 84329
>gb|AC025219.6| Homo sapiens chromosome 15, clone RP11-276M12, complete sequence Length = 144244 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 90145 atccatccatccatccatccatccgtttt 90173
>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete sequence Length = 217752 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 127800 ttcctcctcctcttcttcccc 127780
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 105304 gatccatccacccatccatccatcc 105280
>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete sequence Length = 178519 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||||||| Sbjct: 124571 tcctcctcttcttcccctcctcctc 124595 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 124488 tcctcctcctcttcttcccc 124507
>gb|AC133088.3| Mus musculus BAC clone RP24-138O17 from chromosome 7, complete sequence Length = 144376 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| |||||||||||||||| |||| Sbjct: 89311 atccatccacccatccatccatccatttt 89283
>gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosome 13, complete sequence Length = 227411 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 83331 ttcctcctcctcttcttctcctcctcctc 83303
>gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosome 7, complete sequence Length = 189296 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 156509 ttcctcctcctcttcttcccc 156489
>ref|XM_850041.1| PREDICTED: Canis familiaris similar to ubiquitin specific protease 34 (LOC474608), mRNA Length = 11266 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 7482 ttcctcctcctcttcttcccc 7462
>ref|XM_809409.1| Trypanosoma cruzi strain CL Brener mismatch repair protein MLH1 (Tc00.1047053507991.60) partial mRNA Length = 2577 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1584 ttcctcctcctcttcttcccc 1564
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence Length = 212687 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 26939 atttcctcctcctcttcttcc 26959
>gb|AC131764.3| Mus musculus BAC clone RP24-239L16 from chromosome 6, complete sequence Length = 210145 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 7873 ttcctcctcctcttcttcccc 7893
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence Length = 171820 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 tcctcctcctcttcttccccgcctc 33 ||||||||||||||||| ||||||| Sbjct: 65309 tcctcctcctcttcttctccgcctc 65285
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 153400 ttcctcctcctcttcttcccc 153380
>gb|AC122372.4| Mus musculus BAC clone RP23-463P4 from chromosome 10, complete sequence Length = 183391 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tcctcctcctcttcttccccg 29 ||||||||||||||||||||| Sbjct: 67933 tcctcctcctcttcttccccg 67913 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 tgggtggttttgttgaagtg 531 |||||||||||||||||||| Sbjct: 99140 tgggtggttttgttgaagtg 99121
>ref|XM_849775.1| PREDICTED: Canis familiaris similar to thrombospondin, type I domain containing 3 isoform 2 (LOC612047), mRNA Length = 829 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 567 ttcctcctcctcttcttcccc 547
>gb|AC129337.4| Mus musculus BAC clone RP23-123I14 from 1, complete sequence Length = 184705 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgttttacca 71 ||||||| | |||||||||||||| |||||||| Sbjct: 92085 atccatccatccatccatccatccattttacca 92117
>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence Length = 230940 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 2840 ttcctcctcctcttcttctcctcctcctc 2868
>emb|BX005297.22| Zebrafish DNA sequence from clone CH211-271B8 in linkage group 3, complete sequence Length = 156906 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 105536 catcaacccatccatccatcc 105556
>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence Length = 215370 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 8855 ttcctcctcctcttcttcccc 8835
>emb|CR318660.16| Zebrafish DNA sequence from clone CH211-149I8 in linkage group 21, complete sequence Length = 162045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 116393 catcaacccatccatccatcc 116373
>gb|AC111647.10| Rattus norvegicus 4 BAC CH230-103E9 (Children's Hospital Oakland Research Institute) complete sequence Length = 232538 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||| ||||||| Sbjct: 155923 ttcctcctcctcttctttccctcctcctc 155951
>emb|BX928753.10| Zebrafish DNA sequence from clone DKEY-5J3 in linkage group 17, complete sequence Length = 159225 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 tccatcaacccatccatccatccgt 64 |||||||| |||||||||||||||| Sbjct: 156470 tccatcaatccatccatccatccgt 156494
>emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in linkage group 1, complete sequence Length = 176472 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 82869 gatccatccacccatccatccatcc 82893 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||| |||||||||||||||||| Sbjct: 82758 atccaccaacccatccatccatcc 82781
>emb|Z94162.1|HSN21F1 Human DNA sequence from clone LL22NC03-21F1 on chromosome 22, complete sequence Length = 39212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatcca 59 ||||||||||||||||||||| Sbjct: 35251 atccatcaacccatccatcca 35271 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 35387 atccatcaatccatccatccatcc 35410
>emb|Z84480.1|HS418A9 Human DNA sequence from clone RP3-418A9 on chromosome 6q21 Contains a pseudogene similar to calponin proteins, the 5' part of gene KIAA1028 and a CpG island, complete sequence Length = 121424 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 tcagaagccaaacaattatat 494 ||||||||||||||||||||| Sbjct: 32850 tcagaagccaaacaattatat 32870
>emb|BX119957.13| Human DNA sequence from clone DASS-182C6 on chromosome 6, complete sequence Length = 112118 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 11051 ttcctcctcctcttcttcccc 11031
>emb|BX000357.7| Human DNA sequence from clone DAQB-256B5 on chromosome 6 Contains the GNL1 gene for guanine nucleotide binding protein-like 1, the PRR3 gene for proline-rich polypeptide 3, the ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1 and 2 CpG islands, complete sequence Length = 64172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 47958 ttcctcctcctcttcttcccc 47938
>emb|AL662825.5| Human DNA sequence from clone XXbac-98J21 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the 5' end of the MRPS18B gene for mitochondrial ribosomal protein S18B and three CpG islands, complete sequence Length = 81768 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 39786 ttcctcctcctcttcttcccc 39766
>emb|AL662800.4| Human DNA sequence from clone XXbac-249D20 on chromosome 6 contains the GNL1 gene for guanine nucleotide binding protein-like 1, the gene for CAT56 protein, the ABCF1 gene for ATP-binding cassette, subfamily F, member 1, the PPP1R10 gene for protein phosphatase 1, regulatory subunit 10, the MRPS18B gene for mitochondrial ribosomal protein S18B, two novel proteins, a prothymosin alpha (PTMA) pseudogene and four CpG islands, complete sequence Length = 151228 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 82610 ttcctcctcctcttcttcccc 82590
>emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on chromosome 1 Contains a pseudogene similar to part of cytochrome b, the 5' end of a novel gene and a CpG island, complete sequence Length = 110121 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ccctgccgatccgcgcggtgg 250 ||||||||||||||||||||| Sbjct: 86516 ccctgccgatccgcgcggtgg 86496
>emb|AL445933.32| Human DNA sequence from clone RP11-486B10 on chromosome 1 Contains the EDN2 gene for endothelin 2, the 3' end of the HIVEP3 gene for human immunodeficiency virus type I enhancer binding protein 3 and a novel gene, complete sequence Length = 154153 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 |||||||||| |||||||||||||| Sbjct: 55304 gatccatcaatccatccatccatcc 55328
>emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on chromosome Xp11.3-21.2 Contains part of the CASK gene for calcium/calmodulin-dependent serine protein kinase (MAGUK family) and a ribosomal protein S15a (RPS15A) pseudogene, complete sequence Length = 106605 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 35265 atccatccatccatccatccatccgtttt 35293
>emb|AL121756.14|HSDJ726C3 Human DNA sequence from clone RP4-726C3 on chromosome 20 Contains the C20orf185 gene for the possible ortholog of potential ligand_binding protein RYA3 (Rat), the C20orf186 gene for the possible ortholog of potential ligand_binding protein RY2G5 (Rat), the 5' end of the SPAG4L gene for sperm associated antigen 4-like, a novel gene, a FAM16AX (family with sequence similarity 16, member A, X-linked) pseudogene, the BPIL3 gene for bactericidal/permeability-increasing protein-like 3 and a CpG island, complete sequence Length = 129502 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ccatcaacccatccatccatc 61 ||||||||||||||||||||| Sbjct: 105293 ccatcaacccatccatccatc 105313 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||||||||||||||| |||| Sbjct: 105335 atccatcaacccatccatctatcc 105358
>emb|AL008734.10|HS324M8 Human DNA sequence from clone RP3-324M8 on chromosome 1p36.2-36.3 Contains the 5' end of the gene for a novel SPRY domain containing protein and a CpG island, complete sequence Length = 85116 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 9430 gatccatccacccatccatccatcc 9454 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 9483 atccatccacccatccatccatcc 9506
>gb|AC130187.4| Atelerix albiventris clone LB4-344F17, complete sequence Length = 150117 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 56154 ttcctcctcctcttcttctcctcctcctc 56182
>gb|AC162938.5| Mus musculus BAC clone RP23-104D6 from chromosome 9, complete sequence Length = 204657 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 86883 ttcctcctcctcttcttcccc 86863
>gb|BC034488.2| Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1, transcript variant 1, mRNA (cDNA clone MGC:26501 IMAGE:4826422), complete cds Length = 3204 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 760 ttcctcctcctcttcttcccc 740
>emb|AL669902.8| Mouse DNA sequence from clone RP23-459P8 on chromosome 11 Contains the 5' end of the Rad51c gene for Rad51 homolog c (S. cerevisiae), the 5' end of the Tex14 gene for testis expressed gene 14, a cellular nucleic acid binding protein (Cnbp) pseudogene and five CpG islands, complete sequence Length = 137243 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 91039 ttcctcctcctcttcttcccc 91059
>emb|BX927328.10| Zebrafish DNA sequence from clone CH211-10M4 in linkage group 17, complete sequence Length = 197949 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 tccatcaacccatccatccatccgt 64 |||||||| |||||||||||||||| Sbjct: 85546 tccatcaatccatccatccatccgt 85570
>emb|CR753328.11| Human DNA sequence from clone DADB-129D20 on chromosome 6, complete sequence Length = 105135 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 6653 ttcctcctcctcttcttcccc 6633
>emb|CR759778.8| Human DNA sequence from clone DAMC-83F13 on chromosome 6, complete sequence Length = 88815 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 7161 ttcctcctcctcttcttcccc 7141
>emb|AL954821.10| Mouse DNA sequence from clone RP23-415G6 on chromosome 11, complete sequence Length = 97532 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 atccatcaacccatccatcca 59 ||||||||||||||||||||| Sbjct: 26402 atccatcaacccatccatcca 26422
>emb|AL805916.7| Mouse DNA sequence from clone RP23-164N15 on chromosome 11 Contains the 3' end of a novel gene (4933435A13Rik), the Rel gene for reticuloendotheliosis oncogene and a CpG island, complete sequence Length = 73703 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 36877 ttcctcctcctcttcttcccc 36857
>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete sequence Length = 180777 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgttttaccatccg 75 ||||||| | |||||||||||||||||| ||||||| Sbjct: 134011 atccatccatccatccatccatccgtttatccatccg 134047 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 133999 atccatccacccatccatccatcc 134022 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 133903 atccatccacccatccatccatcc 133926
>emb|BX569794.8| Zebrafish DNA sequence from clone DKEYP-15B2 in linkage group 6, complete sequence Length = 162388 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 |||||||||| |||||||||||||| Sbjct: 60851 gatccatcaatccatccatccatcc 60875
>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete sequence Length = 211513 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 138523 ttcctcctcctcttcttcccc 138543
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 253 gacctggcggccgccgccggggtctcgcg 281 ||||||| |||||||||||| |||||||| Sbjct: 887056 gacctggaggccgccgccggcgtctcgcg 887084
>dbj|AK097681.1| Homo sapiens cDNA FLJ40362 fis, clone TESTI2034506 Length = 1823 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 230 ttcctcctcctcttcttcccc 210
>emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 in linkage group 25, complete sequence Length = 149598 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatccgt 64 |||||||| |||||||||||||||| Sbjct: 74905 tccatcaatccatccatccatccgt 74881
>emb|AL832430.1|HSM803738 Homo sapiens mRNA; cDNA DKFZp762E013 (from clone DKFZp762E013) Length = 2690 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 245 ttcctcctcctcttcttcccc 225
>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence Length = 194718 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 atccatcaacccatccatcca 59 ||||||||||||||||||||| Sbjct: 148746 atccatcaacccatccatcca 148726 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 149989 atccatcaatccatccatccatcc 149966
>dbj|AB210140.1| Pan troglodytes ABCF1 gene for ATP-binding cassette, sub-family F, member 1, complete cds, cell_line: Ericka Length = 21541 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 11260 ttcctcctcctcttcttcccc 11240
>dbj|AB210139.1| Pan troglodytes ABCF1 gene for ATP-binding cassette, sub-family F, member 1, complete cds, cell_line: Borie Length = 21541 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 11260 ttcctcctcctcttcttcccc 11240
>gb|AC108120.3| Homo sapiens chromosome 5 clone RP11-524L6, complete sequence Length = 212755 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 144383 ttcctcctcctcttcttcccc 144403
>dbj|AB202093.1| Homo sapiens ABCF1 gene for ATP-binding cassette, sub-family F (GCN20), member 1, complete cds Length = 21845 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 11607 ttcctcctcctcttcttcccc 11587
>dbj|AK131277.1| Homo sapiens cDNA FLJ16224 fis, clone CTONG3009287 Length = 4435 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1236 ttcctcctcctcttcttcccc 1216
>dbj|AK093503.1| Homo sapiens cDNA FLJ36184 fis, clone TESTI2026925 Length = 1926 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1570 ttcctcctcctcttcttcccc 1550
>gb|AC103976.6| Homo sapiens chromosome 15, clone RP11-121E15, complete sequence Length = 182826 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 137367 atccatccatccatccatccatccgtttt 137339
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 126697 ttcctcctcctcttcttcccc 126677
>dbj|AK142905.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930044H21 product:unclassifiable, full insert sequence Length = 4929 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 3444 gatccatccacccatccatccatcc 3420
>gb|AC091654.4| Homo sapiens BAC clone RP11-177C9 from 7, complete sequence Length = 116507 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccg 63 ||||||| ||||||||||||||||| Sbjct: 67320 atccatccacccatccatccatccg 67344
>ref|XM_938154.1| PREDICTED: Homo sapiens patched domain containing 2 (PTCHD2), mRNA Length = 5652 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ccctgccgatccgcgcggtgg 250 ||||||||||||||||||||| Sbjct: 246 ccctgccgatccgcgcggtgg 226
>ref|XM_052561.8| PREDICTED: Homo sapiens patched domain containing 2 (PTCHD2), mRNA Length = 5649 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ccctgccgatccgcgcggtgg 250 ||||||||||||||||||||| Sbjct: 243 ccctgccgatccgcgcggtgg 223
>emb|BX248512.14| Zebrafish DNA sequence from clone CH211-284D12 in linkage group 2, complete sequence Length = 146757 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 30355 gatccatccacccatccatccatcc 30331
>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence Length = 188905 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 98785 ttcctcctcctcttcttctcctcctcctc 98757
>gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome 17, complete sequence Length = 146960 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 tcctcctcctcttcttccccgcctc 33 ||||||||||||||||| ||||||| Sbjct: 126206 tcctcctcctcttcttctccgcctc 126182
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 1743429 ttcctcctcctcttcttctcctcctcctc 1743457
>gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, complete sequence Length = 190346 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccg 63 ||||||| ||||||||||||||||| Sbjct: 145267 atccatccacccatccatccatccg 145291
>emb|AL929441.37| Mouse DNA sequence from clone RP23-418E20 on chromosome 4, complete sequence Length = 202920 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tttcctcctcctcttcttccc 27 ||||||||||||||||||||| Sbjct: 57685 tttcctcctcctcttcttccc 57705
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 201003 atttcctcctcctcttcttcc 200983
>emb|BX927220.8| Human DNA sequence from clone DAMA-199F12 on chromosome 6, complete sequence Length = 82724 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 70559 ttcctcctcctcttcttcccc 70539
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 101052 ttcctcctcctcttcttctcctcctcctc 101024
>dbj|AK081287.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030046G05 product:unclassifiable, full insert sequence Length = 3508 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 613 ttcctcctcctcttcttcccc 633
>gb|AC148659.1| Macaca mulatta Major Histocompatibility Complex BAC MMU005H07, complete sequence Length = 174766 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 39152 ttcctcctcctcttcttcccc 39132
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 31409972 ttcctcctcctcttcttcccc 31409952 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 cctcctcttcttccccgcctcctc 36 |||||||||||||||| ||||||| Sbjct: 18426876 cctcctcttcttcccctcctcctc 18426899
>gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, complete sequence Length = 173929 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 34447 gatccatccacccatccatccatcc 34471
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcctcctcttcttccccgcc 31 ||||||||||||||||||||| Sbjct: 7429681 ctcctcctcttcttccccgcc 7429701
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence Length = 182611 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 42801 ttcctcctcctcttcttcccc 42821
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1846368 ttcctcctcctcttcttcccc 1846388
>gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosome 13, complete sequence Length = 174991 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 79330 ttcctcctcctcttcttcccc 79350
>gb|AC155247.2| Mus musculus BAC clone RP24-302C23 from chromosome 12, complete sequence Length = 144348 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 7646 ttcctcctcctcttcttcccc 7666
>gb|AF529518.1| Acipenser fulvescens clone AfuG141 microsatellite sequence Length = 609 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccg 63 ||||||| ||||||||||||||||| Sbjct: 208 atccatccacccatccatccatccg 232 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 180 atccatccacccatccatccatcc 203
>gb|AC011445.6|AC011445 Homo sapiens chromosome 19 clone CTC-246B18, complete sequence Length = 138538 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 ||||||||||||||| ||||| ||||||| Sbjct: 105534 ttcctcctcctcttcctcccctcctcctc 105506
>gb|AC006124.2| Homo sapiens chromosome 19, cosmid R34739, complete sequence Length = 32735 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 30337 catcaacccatccatccatcc 30317 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 8655 atccatccacccatccatccatcc 8632 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 8108 atccatccacccatccatccatcc 8085 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 7968 atccatccacccatccatccatcc 7945
>gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 120084 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 57812 ttcctcctcctcttcttcccc 57832
>ref|XM_225880.3| PREDICTED: Rattus norvegicus similar to Hypothetical protein KIAA0233 (predicted) (LOC307380), mRNA Length = 9223 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 1671 atttcctcctcctcttcttcc 1651
>gb|AC120113.2| Homo sapiens chromosome 5 clone CTD-2324F19, complete sequence Length = 129346 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 4577 ttcctcctcctcttcttcccc 4597
>gb|AC162806.4| Mus musculus BAC clone RP23-95E13 from chromosome 9, complete sequence Length = 165949 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 141554 atttcctcctcctcttcttcc 141534
>gb|AC148962.4| Atelerix albiventris clone LB4-372K23, complete sequence Length = 54256 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 14470 ttcctcctcctcttcttctcctcctcctc 14498
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1359754 ttcctcctcctcttcttcccc 1359774
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 935388 ttcctcctcctcttcttcccc 935408
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cggctgcggcggcgctcgcgg 214 ||||||||||||||||||||| Sbjct: 1029895 cggctgcggcggcgctcgcgg 1029875
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcctcctcttcttccccgcc 31 ||||||||||||||||||||| Sbjct: 23387 ctcctcctcttcttccccgcc 23407
>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1711_D06 Length = 87613 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcctcctcttcttccccgcc 31 ||||||||||||||||||||| Sbjct: 72722 ctcctcctcttcttccccgcc 72742
>emb|AL928887.13| Zebrafish DNA sequence from clone CH211-136O14 in linkage group 23, complete sequence Length = 174456 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 147682 catcaacccatccatccatcc 147702
>dbj|AB089940.1| Homo sapiens NGalNAc-T2 mRNA for N-acetylgalactosaminyltransferase, complete cds Length = 2997 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1845 ttcctcctcctcttcttcccc 1825
>gb|AC005775.1|AC005775 Homo sapiens chromosome 19, cosmid F20237, complete sequence Length = 47991 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 1008 catcaacccatccatccatcc 988
>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence Length = 136530 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| |||||||||||||||| |||| Sbjct: 24774 atccatccacccatccatccatccatttt 24746
>emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in linkage group 7, complete sequence Length = 214581 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 ||||||| ||||||||||||||||| Sbjct: 150166 gatccattaacccatccatccatcc 150142
>gb|AC138388.3| Mus musculus BAC clone RP23-455J6 from 10, complete sequence Length = 164600 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 125311 ttcctcctcctcttcttcccc 125291
>emb|CR388128.18| Zebrafish DNA sequence from clone CH211-127B17 in linkage group 18, complete sequence Length = 180022 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 125502 gatccatccacccatccatccatcc 125526 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 152446 atccatccacccatccatccatcc 152423
>emb|BX293565.25| Zebrafish DNA sequence from clone DKEY-268M13 in linkage group 22, complete sequence Length = 160930 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 113491 atccatccatccatccatccatccgtttt 113463
>emb|BX119988.9| Zebrafish DNA sequence from clone CH211-184L6 in linkage group 18, complete sequence Length = 141930 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 tccatcaacccatccatccatccgt 64 |||||| |||||||||||||||||| Sbjct: 6410 tccatccacccatccatccatccgt 6386
>gb|AC005598.6|AC005598 Homo sapiens chromosome 4 clone C0024K08 map 4p16, complete sequence Length = 166743 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 |||||||||||||||||| || ||||||| Sbjct: 33857 ttcctcctcctcttcttctcctcctcctc 33885
>dbj|AP001892.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-49M9, complete sequences Length = 144308 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 1352 ttcctcctcctcttcttcccc 1332
>dbj|AP000798.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-43E2, complete sequences Length = 113054 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 47837 ttcctcctcctcttcttcccc 47817
>gb|AC006138.1|AC006138 Homo sapiens clone UWGC:y54c194 from 6p21, complete sequence Length = 37448 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 27834 ttcctcctcctcttcttcccc 27854
>emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in linkage group 1, complete sequence Length = 172227 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 120153 gatccatccacccatccatccatcc 120129
>emb|BX004817.8| Zebrafish DNA sequence from clone DKEY-169B7, complete sequence Length = 174174 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 48073 gatccatccacccatccatccatcc 48049
>dbj|AB088096.1| Homo sapiens ABC50 gene for ATP-binding cassette, sub-family F (GCN20), member 1, complete cds Length = 21843 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 11604 ttcctcctcctcttcttcccc 11584
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 250697 atttcctcctcctcttcttcc 250717
>emb|BX950172.16| Zebrafish DNA sequence from clone DKEY-20F24 in linkage group 6, complete sequence Length = 231139 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 catcaacccatccatccatcc 62 ||||||||||||||||||||| Sbjct: 184696 catcaacccatccatccatcc 184676 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 184735 atccatcaatccatccatccatcc 184712
>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence Length = 207210 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 61095 ttcctcctcctcttcttcccc 61115
>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete sequence Length = 213347 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 86766 ttcctcctcctcttcttcccc 86746
>emb|CR388001.36| Zebrafish DNA sequence from clone CH211-279I17 in linkage group 22, complete sequence Length = 123028 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 agatccatcaacccatccatccatc 61 ||||||||||| ||||||||||||| Sbjct: 22022 agatccatcaatccatccatccatc 21998
>gb|AC149593.5| Mus musculus BAC clone RP23-34O23 from 7, complete sequence Length = 231000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 86680 ttcctcctcctcttcttcccc 86660
>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence Length = 186950 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gatccatcaacccatccatccatcc 62 |||||||| |||||||||||||||| Sbjct: 161608 gatccatccacccatccatccatcc 161584
>gb|AC149054.3| Mus musculus BAC clone RP23-443H21 from 18, complete sequence Length = 210613 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcctcctcttcttccccgcctcctc 36 ||||||||||||||||| ||||||| Sbjct: 12299 tcctcctcttcttcccctcctcctc 12323 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcctcctcctcttcttcccc 28 |||||||||||||||||||| Sbjct: 12216 tcctcctcctcttcttcccc 12235
>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete sequence Length = 202412 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ccatcaacccatccatccatc 61 ||||||||||||||||||||| Sbjct: 49136 ccatcaacccatccatccatc 49116
>emb|AL953906.6| Mouse DNA sequence from clone RP23-109E21 on chromosome 2, complete sequence Length = 172246 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttccccgcctcctc 36 ||||||||| ||||||||||| ||||||| Sbjct: 85384 ttcctcctcttcttcttccccccctcctc 85412
>emb|BX897750.11| Zebrafish DNA sequence from clone DKEY-278N18, complete sequence Length = 182033 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgttttacca 71 ||||||| | |||||||||||||||||| |||| Sbjct: 129990 atccatccatccatccatccatccgtttaacca 130022 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||||| |||||||||||||| Sbjct: 131602 atccatcaatccatccatccatcc 131625 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 131412 atccatccacccatccatccatcc 131435
>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete sequence Length = 181740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atttcctcctcctcttcttcc 26 ||||||||||||||||||||| Sbjct: 150035 atttcctcctcctcttcttcc 150015
>emb|CR936437.14| Zebrafish DNA sequence from clone CH211-197I23 in linkage group 3, complete sequence Length = 96056 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatccgtttt 67 ||||||| | ||||||||||||||||||| Sbjct: 17428 atccatccatccatccatccatccgtttt 17456 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 16112 atccatccacccatccatccatcc 16135
>gb|AC121990.3| Mus musculus BAC clone RP24-298L8 from chromosome 6, complete sequence Length = 173629 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 27222 ttcctcctcctcttcttcccc 27202
>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete sequence Length = 179832 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gatccatcaacccatccatccatcc 62 ||||||||||| ||||||||||||| Sbjct: 96314 gatccatcaacgcatccatccatcc 96338
>emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chromosome 2, complete sequence Length = 237055 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ccatcaacccatccatccatc 61 ||||||||||||||||||||| Sbjct: 52664 ccatcaacccatccatccatc 52644 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 atccatcaacccatccatccatcc 62 ||||||| |||||||||||||||| Sbjct: 217747 atccatccacccatccatccatcc 217770 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atccatcaacccatccatccatcc 62 ||||||||||||||||| |||||| Sbjct: 52972 atccatcaacccatccaaccatcc 52949
>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence Length = 193902 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttcctcctcctcttcttcccc 28 ||||||||||||||||||||| Sbjct: 190718 ttcctcctcctcttcttcccc 190738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,322,734 Number of Sequences: 3902068 Number of extensions: 6322734 Number of successful extensions: 450085 Number of sequences better than 10.0: 1938 Number of HSP's better than 10.0 without gapping: 1945 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 389058 Number of HSP's gapped (non-prelim): 51186 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
