ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart28f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 218 1e-53
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
3gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 218 1e-53
4dbj|AK106415.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
5ref|XM_469977.1| Oryza sativa (japonica cultivar-group), mRNA 216 4e-53
6gb|BT024147.1| Zea mays clone EL01N0441A06 mRNA sequence 129 8e-27
7ref|XM_476969.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
8ref|XM_506211.1| PREDICTED Oryza sativa (japonica cultivar-group... 88 3e-14
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
10dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
11dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
12dbj|AK119391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
13dbj|AK102563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
14dbj|AK071418.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
15ref|XM_479282.1| Oryza sativa (japonica cultivar-group), mRNA 74 4e-10
16dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
17dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
18gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
19emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 74 4e-10
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 48 0.023
21gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.35
22gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.35
23gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.35
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
27dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
28gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.35
29dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
30dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
31dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
32dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
33ref|XM_863965.1| PREDICTED: Bos taurus similar to death-inducing... 42 1.4
34gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.4
35gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.4
36emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.4
37emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 42 1.4
38emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, OR... 42 1.4
39gb|AF421886.1|AF421886 Rattus norvegicus runt-related transcript... 42 1.4
40ref|NM_130425.1| Rattus norvegicus runt-related transcription fa... 42 1.4
41dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
42gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.4
43gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 42 1.4
44ref|XM_480236.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
45ref|XM_470344.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
46ref|NM_000657.2| Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nucl... 40 5.5
47ref|NM_000633.2| Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nucl... 40 5.5
48gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 40 5.5
49gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis ge... 40 5.5
50emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.5
51gb|BC027258.1| Homo sapiens B-cell CLL/lymphoma 2, transcript va... 40 5.5
52gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.5
53gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 ... 40 5.5
54dbj|AB096611.1| Felis catus mRNA for bcl-2 protein, complete cds 40 5.5
55gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polye... 40 5.5
56gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.5
57gb|S72602.1| bcl2 [human, 697 pre-B cell acute lymphocytic leuke... 40 5.5
58gb|AC021803.8| Homo sapiens chromosome 18, clone RP11-28F1, comp... 40 5.5
59gb|AC009267.15|AC009267 Homo sapiens chromosome 18, clone RP11-4... 40 5.5
60dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
61dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.5
62gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 40 5.5
63gb|AY220759.1| Homo sapiens B-cell CLL/lymphoma 2 (BCL2) gene, c... 40 5.5
64ref|NM_001009340.1| Felis catus BCL2B-cell CLL/lymphoma 2 (BCL2)... 40 5.5
65ref|NM_001002949.1| Canis familiaris B-cell CLL/lymphoma 2 (BCL2... 40 5.5
66dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
67dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.5
68gb|AY893156.1| Synthetic construct Homo sapiens clone FLH119723.... 40 5.5
69gb|AY890676.1| Synthetic construct Homo sapiens clone FLH119727.... 40 5.5
70dbj|AB154172.1| Canis familiaris bcl-2 mRNA for Bcl-2 protein, c... 40 5.5
71ref|XM_565017.1| Anopheles gambiae str. PEST ENSANGP00000026364 ... 40 5.5
72ref|XM_320053.2| Anopheles gambiae str. PEST ENSANGP00000012258 ... 40 5.5
73ref|XM_553211.1| Anopheles gambiae str. PEST ENSANGP00000025467 ... 40 5.5
74gb|AY893929.1| Synthetic construct Homo sapiens clone FLH127828.... 40 5.5
75emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.5
76gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 40 5.5
77dbj|AK061197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
78gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.5
79gb|U66220.1|NEU66220 Nannocystis exedens unknown protein, partia... 40 5.5
80gb|U23762.1|SPU23762 Streptomyces phaeochromogenes plasmid pJV1,... 40 5.5
81gb|M13995.1|HUMBCL2B Human B-cell leukemia/lymphoma 2 (bcl-2) pr... 40 5.5
82gb|M13994.1|HUMBCL2A Human B-cell leukemia/lymphoma 2 (bcl-2) pr... 40 5.5
83emb|X06487.1|HSBCL2IG H.sapiens mRNA for bcl2-Ig fusion gene 40 5.5
84gb|M14745.1|HUMBCL2C Human bcl-2 mRNA 40 5.5

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  218 bits (110), Expect = 1e-53
 Identities = 215/250 (86%)
 Strand = Plus / Plus

                                                                            
Query: 118      gatggagctgttcgcgcacgccaaggcggtgcggctcaagagccggcacgacaagttcct 177
                ||||||||||||||||   ||  ||| |||| |||| |||||||  ||||||||||||||
Sbjct: 33149600 gatggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcct 33149659

                                                                            
Query: 178      gtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcctccccgagcgc 237
                 ||||| |||||||||||| ||||||||||||||||| | |||||| || || ||| |||
Sbjct: 33149660 ctacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgc 33149719

                                                                            
Query: 238      gcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctccgcggcaggta 297
                ||| |||||||||||||  ||||||||| | |||||||  |||||||||||| || | ||
Sbjct: 33149720 gcggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgata 33149779

                                                                            
Query: 298      cggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggt 357
                ||||||||||||  ||||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 33149780 cggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggt 33149839

                          
Query: 358      gctgcaggcg 367
                ||||||||||
Sbjct: 33149840 gctgcaggcg 33149849



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 178      gtacgcggacgaggacgagctg 199
                ||||||||||||||||||||||
Sbjct: 12296524 gtacgcggacgaggacgagctg 12296503



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 121      ggagctgttcgcgcacgccaaggcggtg 148
                |||| ||| |||||||||||||||||||
Sbjct: 34858797 ggagatgtacgcgcacgccaaggcggtg 34858824



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  218 bits (110), Expect = 1e-53
 Identities = 215/250 (86%)
 Strand = Plus / Plus

                                                                            
Query: 118      gatggagctgttcgcgcacgccaaggcggtgcggctcaagagccggcacgacaagttcct 177
                ||||||||||||||||   ||  ||| |||| |||| |||||||  ||||||||||||||
Sbjct: 33240110 gatggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcct 33240169

                                                                            
Query: 178      gtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcctccccgagcgc 237
                 ||||| |||||||||||| ||||||||||||||||| | |||||| || || ||| |||
Sbjct: 33240170 ctacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgc 33240229

                                                                            
Query: 238      gcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctccgcggcaggta 297
                ||| |||||||||||||  ||||||||| | |||||||  |||||||||||| || | ||
Sbjct: 33240230 gcggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgata 33240289

                                                                            
Query: 298      cggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggt 357
                ||||||||||||  ||||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 33240290 cggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggt 33240349

                          
Query: 358      gctgcaggcg 367
                ||||||||||
Sbjct: 33240350 gctgcaggcg 33240359



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 178      gtacgcggacgaggacgagctg 199
                ||||||||||||||||||||||
Sbjct: 12293287 gtacgcggacgaggacgagctg 12293266



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 121      ggagctgttcgcgcacgccaaggcggtg 148
                |||| ||| |||||||||||||||||||
Sbjct: 34948869 ggagatgtacgcgcacgccaaggcggtg 34948896



to top

>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
             sequence
          Length = 144487

 Score =  218 bits (110), Expect = 1e-53
 Identities = 215/250 (86%)
 Strand = Plus / Minus

                                                                         
Query: 118   gatggagctgttcgcgcacgccaaggcggtgcggctcaagagccggcacgacaagttcct 177
             ||||||||||||||||   ||  ||| |||| |||| |||||||  ||||||||||||||
Sbjct: 94955 gatggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcct 94896

                                                                         
Query: 178   gtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcctccccgagcgc 237
              ||||| |||||||||||| ||||||||||||||||| | |||||| || || ||| |||
Sbjct: 94895 ctacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgc 94836

                                                                         
Query: 238   gcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctccgcggcaggta 297
             ||| |||||||||||||  ||||||||| | |||||||  |||||||||||| || | ||
Sbjct: 94835 gcggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgata 94776

                                                                         
Query: 298   cggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggt 357
             ||||||||||||  ||||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 94775 cggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggt 94716

                       
Query: 358   gctgcaggcg 367
             ||||||||||
Sbjct: 94715 gctgcaggcg 94706



to top

>dbj|AK106415.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-A05, full
           insert sequence
          Length = 1480

 Score =  218 bits (110), Expect = 1e-53
 Identities = 215/250 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 gatggagctgttcgcgcacgccaaggcggtgcggctcaagagccggcacgacaagttcct 177
           ||||||||||||||||   ||  ||| |||| |||| |||||||  ||||||||||||||
Sbjct: 120 gatggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcct 179

                                                                       
Query: 178 gtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcctccccgagcgc 237
            ||||| |||||||||||| ||||||||||||||||| | |||||| || || ||| |||
Sbjct: 180 ctacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgc 239

                                                                       
Query: 238 gcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctccgcggcaggta 297
           ||| |||||||||||||  ||||||||| | |||||||  |||||||||||| || | ||
Sbjct: 240 gcggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgata 299

                                                                       
Query: 298 cggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggt 357
           ||||||||||||  ||||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 300 cggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggt 359

                     
Query: 358 gctgcaggcg 367
           ||||||||||
Sbjct: 360 gctgcaggcg 369



to top

>ref|XM_469977.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1167

 Score =  216 bits (109), Expect = 4e-53
 Identities = 214/249 (85%)
 Strand = Plus / Plus

                                                                       
Query: 119 atggagctgttcgcgcacgccaaggcggtgcggctcaagagccggcacgacaagttcctg 178
           |||||||||||||||   ||  ||| |||| |||| |||||||  |||||||||||||| 
Sbjct: 1   atggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcctc 60

                                                                       
Query: 179 tacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcctccccgagcgcg 238
           ||||| |||||||||||| ||||||||||||||||| | |||||| || || ||| ||||
Sbjct: 61  tacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgcg 120

                                                                       
Query: 239 cgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctccgcggcaggtac 298
           || |||||||||||||  ||||||||| | |||||||  |||||||||||| || | |||
Sbjct: 121 cggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgatac 180

                                                                       
Query: 299 ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
           |||||||||||  ||||||||| |||||| ||||||||||| |||||||| |||||||||
Sbjct: 181 ggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggtg 240

                    
Query: 359 ctgcaggcg 367
           |||||||||
Sbjct: 241 ctgcaggcg 249



to top

>gb|BT024147.1| Zea mays clone EL01N0441A06 mRNA sequence
          Length = 1368

 Score =  129 bits (65), Expect = 8e-27
 Identities = 197/241 (81%)
 Strand = Plus / Plus

                                                                       
Query: 118 gatggagctgttcgcgcacgccaaggcggtgcggctcaagagccggcacgacaagttcct 177
           ||||||||||||||||| |||||||| |||||||||||||||||  |||||||||  |||
Sbjct: 117 gatggagctgttcgcgcgcgccaaggtggtgcggctcaagagccaccacgacaagggcct 176

                                                                       
Query: 178 gtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcctccccgagcgc 237
           |||||||||||||||||||  |||||| ||||| || ||  |||| || ||  ||| |||
Sbjct: 177 gtacgcggacgaggacgaggcgcacgtgacgcaagagcgggacgggtcgtcggcgaacgc 236

                                                                       
Query: 238 gcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctccgcggcaggta 297
           ||| ||| | |||||||| | |||||||   || |||||  | ||||| ||  || ||||
Sbjct: 237 gcggtgggccgtggagccggcgccgcacaacccgggcgccatccgcctgcggagccggta 296

                                                                       
Query: 298 cggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggt 357
           ||||| ||||||  ||||||||   |||||||||||||| || |||||||| || |||||
Sbjct: 297 cggccactacctcaccgcctccggggagccgttcctgctggggatgacgggccggaaggt 356

            
Query: 358 g 358
           |
Sbjct: 357 g 357



to top

>ref|XM_476969.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1279

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 167 gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
           ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 134 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 193

                                                                       
Query: 227 tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
           ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 194 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 253

                                                                       
Query: 287 cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
           ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 254 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 313

                               
Query: 347 ggacgcaaggtgctgcaggc 366
           || |||||||| || |||||
Sbjct: 314 ggccgcaaggtcctccaggc 333



to top

>ref|XM_506211.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0003E08.28
           mRNA
          Length = 1531

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 167 gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
           ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 297 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 356

                                                                       
Query: 227 tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
           ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 357 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 416

                                                                       
Query: 287 cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
           ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 417 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 476

                               
Query: 347 ggacgcaaggtgctgcaggc 366
           || |||||||| || |||||
Sbjct: 477 ggccgcaaggtcctccaggc 496



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                           
Query: 167     gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
               ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 4973001 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 4973060

                                                                           
Query: 227     tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
               ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 4973061 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 4973120

                                                                           
Query: 287     cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
               ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 4973121 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 4973180

                                   
Query: 347     ggacgcaaggtgctgcaggc 366
               || |||||||| || |||||
Sbjct: 4973181 ggccgcaaggtcctccaggc 4973200



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 299      ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
                |||||||||||  ||||||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct: 26558341 ggccgctacctctccgcctccaacgaacccttcctgctcgggataacgggccgcaaggtg 26558400

                         
Query: 359      ctgcaggcg 367
                |||||||||
Sbjct: 26558401 ctgcaggcg 26558409



to top

>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                         
Query: 167   gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
             ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 14690 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 14749

                                                                         
Query: 227   tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
             ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 14750 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 14809

                                                                         
Query: 287   cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
             ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 14810 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 14869

                                 
Query: 347   ggacgcaaggtgctgcaggc 366
             || |||||||| || |||||
Sbjct: 14870 ggccgcaaggtcctccaggc 14889



to top

>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0003E08
          Length = 161095

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                          
Query: 167    gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
              ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 158485 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 158544

                                                                          
Query: 227    tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
              ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 158545 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 158604

                                                                          
Query: 287    cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
              ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 158605 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 158664

                                  
Query: 347    ggacgcaaggtgctgcaggc 366
              || |||||||| || |||||
Sbjct: 158665 ggccgcaaggtcctccaggc 158684



to top

>dbj|AK119391.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-C10, full
           insert sequence
          Length = 3221

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 167 gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
           ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 168 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 227

                                                                       
Query: 227 tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
           ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 228 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 287

                                                                       
Query: 287 cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
           ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 288 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 347

                               
Query: 347 ggacgcaaggtgctgcaggc 366
           || |||||||| || |||||
Sbjct: 348 ggccgcaaggtcctccaggc 367



to top

>dbj|AK102563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097K02, full
           insert sequence
          Length = 1530

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 167 gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
           ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 297 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 356

                                                                       
Query: 227 tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
           ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 357 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 416

                                                                       
Query: 287 cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
           ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 417 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 476

                               
Query: 347 ggacgcaaggtgctgcaggc 366
           || |||||||| || |||||
Sbjct: 477 ggccgcaaggtcctccaggc 496



to top

>dbj|AK071418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092I11, full
           insert sequence
          Length = 1278

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 167 gacaagttcctgtacgcggacgaggacgagctgcacgtcacgcaggaccgcaacggctcc 226
           ||||||| |||||||||||| |||||||||  || |||| | |||||||| | || ||| 
Sbjct: 133 gacaagtacctgtacgcggaggaggacgagtcgcgcgtctcccaggaccggagcgcctcg 192

                                                                       
Query: 227 tccccgagcgcgcgctggacggtggagcccgtgccgcacgcgcccggcgcggtgcgcctc 286
           ||||||| |||||| ||| | || ||||| || || ||||| |||||||   | ||||||
Sbjct: 193 tccccgaacgcgcggtggtccgtcgagccggtcccccacgcccccggcgtcctccgcctc 252

                                                                       
Query: 287 cgcggcaggtacggccgctacctggccgcctccaccgagccgttcctgctcggcatgacg 346
           ||| ||   ||||||||||||||  ||||||||| |||||| ||||| |||||| | || 
Sbjct: 253 cgcagccactacggccgctacctctccgcctccaacgagcccttcctcctcggcgtcacc 312

                               
Query: 347 ggacgcaaggtgctgcaggc 366
           || |||||||| || |||||
Sbjct: 313 ggccgcaaggtcctccaggc 332



to top

>ref|XM_479282.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1323

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 299 ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
           |||||||||||  ||||||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct: 46  ggccgctacctctccgcctccaacgaacccttcctgctcgggataacgggccgcaaggtg 105

                    
Query: 359 ctgcaggcg 367
           |||||||||
Sbjct: 106 ctgcaggcg 114



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 299      ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
                |||||||||||  ||||||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct: 18885515 ggccgctacctctccgcctccaacgaacccttcctgctcgggataacgggccgcaaggtg 18885574

                         
Query: 359      ctgcaggcg 367
                |||||||||
Sbjct: 18885575 ctgcaggcg 18885583



to top

>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                          
Query: 299    ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
              |||||||||||  ||||||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct: 103612 ggccgctacctctccgcctccaacgaacccttcctgctcgggataacgggccgcaaggtg 103671

                       
Query: 359    ctgcaggcg 367
              |||||||||
Sbjct: 103672 ctgcaggcg 103680



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 299      ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
                |||||||||||  ||||||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct: 18811742 ggccgctacctctccgcctccaacgaacccttcctgctcgggataacgggccgcaaggtg 18811801

                         
Query: 359      ctgcaggcg 367
                |||||||||
Sbjct: 18811802 ctgcaggcg 18811810



to top

>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 299   ggccgctacctggccgcctccaccgagccgttcctgctcggcatgacgggacgcaaggtg 358
             |||||||||||  ||||||||| ||| || ||||||||||| || ||||| |||||||||
Sbjct: 84864 ggccgctacctctccgcctccaacgaacccttcctgctcgggataacgggccgcaaggtg 84805

                      
Query: 359   ctgcaggcg 367
             |||||||||
Sbjct: 84804 ctgcaggcg 84796



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 350     cgcaaggtgctgcaggcggccgcg 373
               ||||||||||||||||||||||||
Sbjct: 3390522 cgcaaggtgctgcaggcggccgcg 3390545



to top

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 20      tcgtcaacctcgccgcctacca 41
               ||||||||||||||||||||||
Sbjct: 2758065 tcgtcaacctcgccgcctacca 2758086



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 13      agcctcgtcgtcaacctcgccg 34
               ||||||||||||||||||||||
Sbjct: 4142715 agcctcgtcgtcaacctcgccg 4142694



to top

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 17      tcgtcgtcaacctcgccgccta 38
               ||||||||||||||||||||||
Sbjct: 1170941 tcgtcgtcaacctcgccgccta 1170962



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 220     cggctcctccccgagcgcgcgc 241
               ||||||||||||||||||||||
Sbjct: 8732704 cggctcctccccgagcgcgcgc 8732725



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 220     cggctcctccccgagcgcgcgc 241
               ||||||||||||||||||||||
Sbjct: 8723780 cggctcctccccgagcgcgcgc 8723801



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 278     gtgcgcctccgcggcaggtacggccgctacct 309
               |||||||||||||||   ||||||||||||||
Sbjct: 3782825 gtgcgcctccgcggcgcctacggccgctacct 3782856



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 220      cggctcctccccgagcgcgcgc 241
                ||||||||||||||||||||||
Sbjct: 23382053 cggctcctccccgagcgcgcgc 23382074



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 220      cggctcctccccgagcgcgcgc 241
                ||||||||||||||||||||||
Sbjct: 23357955 cggctcctccccgagcgcgcgc 23357976



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 220      cggctcctccccgagcgcgcgc 241
                ||||||||||||||||||||||
Sbjct: 19943932 cggctcctccccgagcgcgcgc 19943911



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 220      cggctcctccccgagcgcgcgc 241
                ||||||||||||||||||||||
Sbjct: 19934998 cggctcctccccgagcgcgcgc 19934977



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 251      gagcccgtgccgcacgcgcc 270
                ||||||||||||||||||||
Sbjct: 11527973 gagcccgtgccgcacgcgcc 11527992



to top

>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0062A24
          Length = 148362

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 46841 cggctcctccccgagcgcgcgc 46820



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 37907 cggctcctccccgagcgcgcgc 37886



to top

>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 178   gtacgcggacgaggacgagctg 199
             ||||||||||||||||||||||
Sbjct: 66057 gtacgcggacgaggacgagctg 66036



to top

>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0437G01
          Length = 147101

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 10453 cggctcctccccgagcgcgcgc 10474



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 220  cggctcctccccgagcgcgcgc 241
            ||||||||||||||||||||||
Sbjct: 1529 cggctcctccccgagcgcgcgc 1550



to top

>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0038P01
          Length = 148506

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 95128 cggctcctccccgagcgcgcgc 95149



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 71030 cggctcctccccgagcgcgcgc 71051



to top

>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1653_F07, complete sequence
          Length = 110109

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 220 cggctcctccccgagcgcgcgc 241
           ||||||||||||||||||||||
Sbjct: 728 cggctcctccccgagcgcgcgc 749



to top

>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0070J06
          Length = 142303

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 75683 cggctcctccccgagcgcgcgc 75704



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 220   cggctcctccccgagcgcgcgc 241
             ||||||||||||||||||||||
Sbjct: 66759 cggctcctccccgagcgcgcgc 66780



to top

>ref|XM_863965.1| PREDICTED: Bos taurus similar to death-inducing-protein, transcript
            variant 1 (LOC613430), mRNA
          Length = 2614

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 368  gccgcggcccccgggggccgccccc 392
            |||||||||||||| ||||||||||
Sbjct: 2338 gccgcggcccccggcggccgccccc 2314



to top

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    gccgcggcccccgggggccgc 388
              |||||||||||||||||||||
Sbjct: 454396 gccgcggcccccgggggccgc 454376



to top

>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 258     tgccgcacgcgcccggcgcgg 278
               |||||||||||||||||||||
Sbjct: 1215703 tgccgcacgcgcccggcgcgg 1215723



to top

>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14
          Length = 324050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    gccgcggcccccgggggccgc 388
              |||||||||||||||||||||
Sbjct: 112324 gccgcggcccccgggggccgc 112304



to top

>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 92     accaccagcccaccgccggcgccgc 116
              |||||||| ||||||||||||||||
Sbjct: 275610 accaccaggccaccgccggcgccgc 275634



to top

>emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, ORF14, ORF13, ORF12,
             ORF11, ORF10, ORF9, ORF8, ORF7, ORF6, ORF5, ORF4, ORF3,
             tubA gene, ORF2, tubZ gene, ORF1, tubB gene, tubC gene,
             tubD gene, tubE gene, tubF gene, ORF17, ORF18, ORF19,
             ORF20, tubG gene, ORF21, ORF22, ORF23 and ORF24, strain An
             d48
          Length = 82868

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 356   gtgctgcaggcggccgcggcc 376
             |||||||||||||||||||||
Sbjct: 56132 gtgctgcaggcggccgcggcc 56152



to top

>gb|AF421886.1|AF421886 Rattus norvegicus runt-related transcription factor 3 (Runx3) mRNA,
           Runx3-s allele, complete cds
          Length = 1230

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 361 gcaggcggccgcggcccccgggggccgcccccg 393
           |||||||||||||| |||||| |||||| ||||
Sbjct: 117 gcaggcggccgcgggccccggcggccgcacccg 149



to top

>ref|NM_130425.1| Rattus norvegicus runt-related transcription factor 3 (Runx3), mRNA
          Length = 1230

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 361 gcaggcggccgcggcccccgggggccgcccccg 393
           |||||||||||||| |||||| |||||| ||||
Sbjct: 117 gcaggcggccgcgggccccggcggccgcacccg 149



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 122     gagctgttcgcgcacgccaaggcggtgcggctc 154
               |||| ||||||||||||||| ||||||| ||||
Sbjct: 5098189 gagccgttcgcgcacgccaaagcggtgctgctc 5098157



to top

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 366    cggccgcggcccccgggggccgccc 390
              ||||||||||||||||| |||||||
Sbjct: 581924 cggccgcggcccccgggcgccgccc 581948



to top

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 309    tggccgcctccaccgagccgttcctgctcggca 341
              |||||| |||||||||||||||||  |||||||
Sbjct: 105417 tggccgactccaccgagccgttccgcctcggca 105449



to top

>ref|XM_480236.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 278 gtgcgcctccgcggcaggtacggccgctacct 309
           |||||||||||||||   ||||||||||||||
Sbjct: 232 gtgcgcctccgcggcgcctacggccgctacct 263



to top

>ref|XM_470344.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 121  ggagctgttcgcgcacgccaaggcggtg 148
            |||| ||| |||||||||||||||||||
Sbjct: 1045 ggagatgtacgcgcacgccaaggcggtg 1072



to top

>ref|NM_000657.2| Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding
           mitochondrial protein, transcript variant beta, mRNA
          Length = 1207

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 607 gcccccgggggccgcccccg 626



to top

>ref|NM_000633.2| Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding
           mitochondrial protein, transcript variant alpha, mRNA
          Length = 6492

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 607 gcccccgggggccgcccccg 626



to top

>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence,
            complete sequence
          Length = 164352

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 121  ggagctgttcgcgcacgccaaggcggtg 148
            |||| ||| |||||||||||||||||||
Sbjct: 3853 ggagatgtacgcgcacgccaaggcggtg 3826



to top

>gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis gene cluster,
           partial sequence
          Length = 11426

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 181 cgcggacgaggacgagctgc 200
           ||||||||||||||||||||
Sbjct: 240 cgcggacgaggacgagctgc 259



to top

>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    cgcgcgctggacggtggagc 254
              ||||||||||||||||||||
Sbjct: 155099 cgcgcgctggacggtggagc 155118



to top

>gb|BC027258.1| Homo sapiens B-cell CLL/lymphoma 2, transcript variant alpha, mRNA
           (cDNA clone MGC:21366 IMAGE:4511027), complete cds
          Length = 2704

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 503 gcccccgggggccgcccccg 522



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      gcccaccgccggcgccgcgg 118
               ||||||||||||||||||||
Sbjct: 3020161 gcccaccgccggcgccgcgg 3020142



to top

>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster
             A47934, complete sequence
          Length = 69301

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 220   cggctcctccccgagcgcgcgctggacg 247
             ||||||||||||| | ||||||||||||
Sbjct: 56837 cggctcctccccgggagcgcgctggacg 56810



to top

>dbj|AB096611.1| Felis catus mRNA for bcl-2 protein, complete cds
          Length = 1423

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 627 gcccccgggggccgcccccg 646



to top

>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   gcaggcggccgcggcccccg 380
             ||||||||||||||||||||
Sbjct: 13473 gcaggcggccgcggcccccg 13492



to top

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 203     gtcacgcaggaccgcaacgg 222
               ||||||||||||||||||||
Sbjct: 3975714 gtcacgcaggaccgcaacgg 3975695



to top

>gb|S72602.1| bcl2 [human, 697 pre-B cell acute lymphocytic leukemia cell line,
           Genomic, 454 nt]
          Length = 454

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 154 gcccccgggggccgcccccg 173



to top

>gb|AC021803.8| Homo sapiens chromosome 18, clone RP11-28F1, complete sequence
          Length = 117121

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   gcccccgggggccgcccccg 393
             ||||||||||||||||||||
Sbjct: 38972 gcccccgggggccgcccccg 38991



to top

>gb|AC009267.15|AC009267 Homo sapiens chromosome 18, clone RP11-495C15, complete sequence
          Length = 188923

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gcccccgggggccgcccccg 393
             ||||||||||||||||||||
Sbjct: 32304 gcccccgggggccgcccccg 32285



to top

>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0008D05
          Length = 134776

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   gagcccgtgccgcacgcgcc 270
             ||||||||||||||||||||
Sbjct: 34980 gagcccgtgccgcacgcgcc 34999



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 175     cctgtacgcggacgaggacgagct 198
               ||||||||| ||||||||||||||
Sbjct: 5421688 cctgtacgccgacgaggacgagct 5421711



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 350     cgcaaggtgctgcaggcggccgcg 373
               ||||||||||||||||||| ||||
Sbjct: 4568353 cgcaaggtgctgcaggcgggcgcg 4568330



to top

>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
              sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 121    ggagctgttcgcgcacgccaaggcggtg 148
              |||| ||| |||||||||||||||||||
Sbjct: 156683 ggagatgtacgcgcacgccaaggcggtg 156656



to top

>gb|AY220759.1| Homo sapiens B-cell CLL/lymphoma 2 (BCL2) gene, complete cds
          Length = 198051

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  gcccccgggggccgcccccg 393
            ||||||||||||||||||||
Sbjct: 1156 gcccccgggggccgcccccg 1175



to top

>ref|NM_001009340.1| Felis catus BCL2B-cell CLL/lymphoma 2 (BCL2), mRNA
          Length = 1423

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 627 gcccccgggggccgcccccg 646



to top

>ref|NM_001002949.1| Canis familiaris B-cell CLL/lymphoma 2 (BCL2), mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 546 gcccccgggggccgcccccg 565



to top

>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_C01
          Length = 192857

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 278   gtgcgcctccgcggcaggtacggccgctacct 309
             |||||||||||||||   ||||||||||||||
Sbjct: 48042 gtgcgcctccgcggcgcctacggccgctacct 48073



to top

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     aaggtgctgcaggcggccgc 372
               ||||||||||||||||||||
Sbjct: 4303023 aaggtgctgcaggcggccgc 4303042



to top

>gb|AY893156.1| Synthetic construct Homo sapiens clone FLH119723.01L B-cell
           CLL/lymphoma 2 (BCL2) mRNA, partial cds
          Length = 720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 114 gcccccgggggccgcccccg 133



to top

>gb|AY890676.1| Synthetic construct Homo sapiens clone FLH119727.01X B-cell
           CLL/lymphoma 2 (BCL2) mRNA, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 114 gcccccgggggccgcccccg 133



to top

>dbj|AB154172.1| Canis familiaris bcl-2 mRNA for Bcl-2 protein, complete cds
          Length = 1374

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 546 gcccccgggggccgcccccg 565



to top

>ref|XM_565017.1| Anopheles gambiae str. PEST ENSANGP00000026364
           (ENSANGG00000016360), partial mRNA
          Length = 2637

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 acgcggacgaggacgagctg 199
           ||||||||||||||||||||
Sbjct: 563 acgcggacgaggacgagctg 582



to top

>ref|XM_320053.2| Anopheles gambiae str. PEST ENSANGP00000012258 (ENSANGG00000009769),
            partial mRNA
          Length = 2583

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  cggacgaggacgagctgcac 202
            ||||||||||||||||||||
Sbjct: 2528 cggacgaggacgagctgcac 2547



to top

>ref|XM_553211.1| Anopheles gambiae str. PEST ENSANGP00000025467 (ENSANGG00000009769),
            partial mRNA
          Length = 3120

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  cggacgaggacgagctgcac 202
            ||||||||||||||||||||
Sbjct: 3062 cggacgaggacgagctgcac 3081



to top

>gb|AY893929.1| Synthetic construct Homo sapiens clone FLH127828.01L B-cell
           CLL/lymphoma 2 (BCL2) mRNA, partial cds
          Length = 720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 114 gcccccgggggccgcccccg 133



to top

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    ctgttcgcgcacgccaaggcggtg 148
              ||||||||||||| ||||||||||
Sbjct: 944281 ctgttcgcgcacggcaaggcggtg 944304



to top

>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
             hypothetical protein, putative NAM protein, putative
             cis-zeatin O-glucosyltransferases, putative small nuclear
             ribonucleoprotein, putative cis-zeatin
             O-glucosyltransferase, putative glutathione peroxidase,
             putative copper-exporting ATPases, putative
             serine/threonine dehydratase, and putative actin
             depolymerizing factor genes, complete cds; and
             hypothetical protein gene, partial cds
          Length = 157237

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   agagccggcacgacaagttcctgt 179
             |||||||||||| |||||||||||
Sbjct: 69418 agagccggcacgccaagttcctgt 69441



to top

>dbj|AK061197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-H06, full
           insert sequence
          Length = 1022

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 121 ggagctgttcgcgcacgccaaggcggtg 148
           |||| ||| |||||||||||||||||||
Sbjct: 532 ggagatgtacgcgcacgccaaggcggtg 559



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    aggcggccgcggcccccggg 382
              ||||||||||||||||||||
Sbjct: 625771 aggcggccgcggcccccggg 625752



to top

>gb|U66220.1|NEU66220 Nannocystis exedens unknown protein, partial cds and microsatellite
           sequence 7A140
          Length = 1689

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  gcctcgtcgtcaacctcgcc 33
           ||||||||||||||||||||
Sbjct: 476 gcctcgtcgtcaacctcgcc 457



to top

>gb|U23762.1|SPU23762 Streptomyces phaeochromogenes plasmid pJV1, complete sequence
          Length = 11143

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  cgagcgcgcgctggacggtg 250
            ||||||||||||||||||||
Sbjct: 5358 cgagcgcgcgctggacggtg 5339



to top

>gb|M13995.1|HUMBCL2B Human B-cell leukemia/lymphoma 2 (bcl-2) proto-oncogene mRNA
           encoding bcl-2-beta protein, complete cds
          Length = 911

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 260 gcccccgggggccgcccccg 279



to top

>gb|M13994.1|HUMBCL2A Human B-cell leukemia/lymphoma 2 (bcl-2) proto-oncogene mRNA encoding
            bcl-2-alpha protein, complete cds
          Length = 5086

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  gcccccgggggccgcccccg 393
            ||||||||||||||||||||
Sbjct: 1572 gcccccgggggccgcccccg 1591



to top

>emb|X06487.1|HSBCL2IG H.sapiens mRNA for bcl2-Ig fusion gene
          Length = 1846

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  gcccccgggggccgcccccg 393
            ||||||||||||||||||||
Sbjct: 1000 gcccccgggggccgcccccg 1019



to top

>gb|M14745.1|HUMBCL2C Human bcl-2 mRNA
          Length = 6030

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcccccgggggccgcccccg 393
           ||||||||||||||||||||
Sbjct: 145 gcccccgggggccgcccccg 164


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,187,858
Number of Sequences: 3902068
Number of extensions: 2187858
Number of successful extensions: 58102
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54771
Number of HSP's gapped (non-prelim): 3317
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top