>PROB_GLUOX (Q5FUL1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 378

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 65  HHPSKTKDKAKMGSRYEVEVTVGAARDLKNVNWRNGDLKPYAVLWIDAGAR 217
           HHP +      + + +  +   G+AR      W  G L+P   L IDAGAR
Sbjct: 249 HHPLRRLQNGGLCTWFMAQTDAGSARK----RWIGGSLQPKGTLTIDAGAR 295

>YLZ5_CAEEL (P34418) Hypothetical protein F42H10.5|
          Length = 810

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
 Frame = +2

Query: 71  PSKTKDKAKMGSRYEVEVTVGA-ARDLKNVNWRNGDLKPYAVLWIDAGARCSTRVDLDNG 247
           P+ T   A + +  +  +T+ A  + +++  WRN D K   +    A A  ++ VD +  
Sbjct: 245 PTPTSSNAGLNALQQAGLTLAANGQIIQSKKWRNDDKKQKELCTKFALALATSHVDFEVV 304

Query: 248 ENPTWDDKVVVPLPPASRLQDAALYLDIVHANAPEGVKPL 367
           +NP W +   +  P  S +   + Y  IV++ + + ++ L
Sbjct: 305 QNPLWKEVFEMAQPKFS-IPTESQYEHIVNSTSHKLIQSL 343

>WWP1_MOUSE (Q8BZZ3) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-)|
           (WW domain-containing protein 1)
          Length = 918

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/67 (23%), Positives = 36/67 (53%)
 Frame = +2

Query: 107 RYEVEVTVGAARDLKNVNWRNGDLKPYAVLWIDAGARCSTRVDLDNGENPTWDDKVVVPL 286
           R +++VTV +A+  +  NW    +  Y  + +D   + + +    +  NP WD++++V +
Sbjct: 17  RLQLKVTVSSAKLKRKKNWFGTAI--YTEVIVDGEVKKTAKSS--SSSNPKWDEQLIVNV 72

Query: 287 PPASRLQ 307
            P + L+
Sbjct: 73  TPQTTLE 79

>DNAA_STRRE (Q9ZH76) Chromosomal replication initiator protein dnaA|
          Length = 643

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 455 PSGRPQGKLDVRVAVREPARYYDPNPGAYPAP 550
           PS RP     VR A   P+ Y+ P PGA+P P
Sbjct: 144 PSARPDQLPTVRPAY--PSEYHRPEPGAWPRP 173

>WWP1_HUMAN (Q9H0M0) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-)|
           (WW domain-containing protein 1) (Atropin-1-interacting
           protein 5) (AIP5)
          Length = 922

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 107 RYEVEVTVGAARDLKNVNWRNGDLKPYAVLWIDAGARCSTRVDLDNGENPTWDDKVVVPL 286
           R +++VTV +A+  +  NW    +  Y  + +D     +      +  NP WD+++ V +
Sbjct: 17  RLQLQVTVSSAKLKRKKNWFGTAI--YTEVVVDG--EITKTAKSSSSSNPKWDEQLTVNV 72

Query: 287 PPASRLQ 307
            P + L+
Sbjct: 73  TPQTTLE 79

>TOP1_HAEIN (P43012) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 868

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 71  PSKTKDKAK-MGSRYEVEVTVGAARDLKNVNWRNGD-LKPYAVLWIDAGARCSTRVD 235
           P+K K   K +GS+Y V+ +VG  RDL  V    G+  KP +   +DA  +   + +
Sbjct: 11  PAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSTGEKAKPISTKGMDAEEKAKIKAE 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,217,805
Number of Sequences: 219361
Number of extensions: 840235
Number of successful extensions: 2793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2793
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)