ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart28e12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043P14, full insert sequence Length = 1193 Score = 236 bits (119), Expect = 6e-59 Identities = 206/235 (87%) Strand = Plus / Plus Query: 273 gagaggaacgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgcc 332 |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct: 247 gagaggaacgtgcagtgggtgttcctcgggtgccccggcgtgggcaaggggacttatgcc 306 Query: 333 agtcgcctctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgac 392 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 307 agccgcctctcccgcctcctcggcgtgccccacatcgccaccggggatctcgtccgcgac 366 Query: 393 gagctcgcctccaccgggcccgatgccgtgcagcttaaggaaattgttaatcaagggaag 452 |||||||| ||| |||| ||| | ||||||||| |||||||| ||||| ||||| Sbjct: 367 gagctcgcttcctccggccccctatctgtgcagcttgctgaaattgtaaatcaggggaaa 426 Query: 453 ctggtttctgatgaaattatcatcaatcttttatctaaacggcttaggaaaggag 507 | |||||||||||||||||||||||||| ||||||||||| |||| |||||||| Sbjct: 427 ttagtttctgatgaaattatcatcaatctgttatctaaacgtcttaagaaaggag 481
>ref|XM_493821.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 176 bits (89), Expect = 5e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 273 gagaggaacgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgcc 332 |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct: 172 gagaggaacgtgcagtgggtgttcctcgggtgccccggcgtgggcaaggggacttatgcc 231 Query: 333 agtcgcctctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgac 392 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 232 agccgcctctcccgcctcctcggcgtgccccacatcgccaccggggatctcgtccgcgac 291 Query: 393 gagctcgcctccaccgg 409 |||||||| ||| |||| Sbjct: 292 gagctcgcttcctccgg 308 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 432 gaaattgttaatcaagggaagctggtttctgatgaaattatcatcaatcttttatctaaa 491 |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 421 gaaattgttaatcaggggaaattagtttctgatgaaattatcatcaatctgttatctaaa 480 Query: 492 cggcttaggaaaggag 507 || |||| |||||||| Sbjct: 481 cgtcttaagaaaggag 496
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 5e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 273 gagaggaacgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgcc 332 |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct: 1696423 gagaggaacgtgcagtgggtgttcctcgggtgccccggcgtgggcaaggggacttatgcc 1696482 Query: 333 agtcgcctctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgac 392 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 1696483 agccgcctctcccgcctcctcggcgtgccccacatcgccaccggggatctcgtccgcgac 1696542 Query: 393 gagctcgcctccaccgg 409 |||||||| ||| |||| Sbjct: 1696543 gagctcgcttcctccgg 1696559 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 432 gaaattgttaatcaagggaagctggtttctgatgaaattatcatcaatcttttatctaaa 491 |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 1697661 gaaattgttaatcaggggaaattagtttctgatgaaattatcatcaatctgttatctaaa 1697720 Query: 492 cggcttaggaaaggag 507 || |||| |||||||| Sbjct: 1697721 cgtcttaagaaaggag 1697736 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 25203165 cggagaggaggcgccggccgg 25203145 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gtgaccgcggcggcgccggccttc 233 ||||| |||||||||||||||||| Sbjct: 27368134 gtgacggcggcggcgccggccttc 27368157 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 4349334 gcgccgcggcgtcgtcgtcg 4349353
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 5e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 273 gagaggaacgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgcc 332 |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct: 1696421 gagaggaacgtgcagtgggtgttcctcgggtgccccggcgtgggcaaggggacttatgcc 1696480 Query: 333 agtcgcctctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgac 392 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 1696481 agccgcctctcccgcctcctcggcgtgccccacatcgccaccggggatctcgtccgcgac 1696540 Query: 393 gagctcgcctccaccgg 409 |||||||| ||| |||| Sbjct: 1696541 gagctcgcttcctccgg 1696557 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 432 gaaattgttaatcaagggaagctggtttctgatgaaattatcatcaatcttttatctaaa 491 |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 1697659 gaaattgttaatcaggggaaattagtttctgatgaaattatcatcaatctgttatctaaa 1697718 Query: 492 cggcttaggaaaggag 507 || |||| |||||||| Sbjct: 1697719 cgtcttaagaaaggag 1697734 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 25294537 cggagaggaggcgccggccgg 25294517 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gtgaccgcggcggcgccggccttc 233 ||||| |||||||||||||||||| Sbjct: 27459457 gtgacggcggcggcgccggccttc 27459480 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 4349449 gcgccgcggcgtcgtcgtcg 4349468
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 176 bits (89), Expect = 5e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 273 gagaggaacgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgcc 332 |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct: 108886 gagaggaacgtgcagtgggtgttcctcgggtgccccggcgtgggcaaggggacttatgcc 108945 Query: 333 agtcgcctctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgac 392 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 108946 agccgcctctcccgcctcctcggcgtgccccacatcgccaccggggatctcgtccgcgac 109005 Query: 393 gagctcgcctccaccgg 409 |||||||| ||| |||| Sbjct: 109006 gagctcgcttcctccgg 109022 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 432 gaaattgttaatcaagggaagctggtttctgatgaaattatcatcaatcttttatctaaa 491 |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 110124 gaaattgttaatcaggggaaattagtttctgatgaaattatcatcaatctgttatctaaa 110183 Query: 492 cggcttaggaaaggag 507 || |||| |||||||| Sbjct: 110184 cgtcttaagaaaggag 110199
>ref|XM_474301.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 121 bits (61), Expect = 2e-24 Identities = 116/133 (87%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 281 cgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgccagtcgcct 340 |||||||||||| ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct: 159 cgtgcagtgggtgttcctgggctgccccggggtggggaagggcacctacgccagccgcct 218 Query: 341 ctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagctcgc 400 ||| | | ||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 219 ctcgcagatgctccgcgtgccccacatcgccaccggcgatctcgtccgcgacgccctcgc 278 Query: 401 ctccaccgggccc 413 |||| |||||||| Sbjct: 279 ctcc-ccgggccc 290
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 121 bits (61), Expect = 2e-24 Identities = 116/133 (87%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 281 cgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgccagtcgcct 340 |||||||||||| ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct: 183891 cgtgcagtgggtgttcctgggctgccccggggtggggaagggcacctacgccagccgcct 183832 Query: 341 ctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagctcgc 400 ||| | | ||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 183831 ctcgcagatgctccgcgtgccccacatcgccaccggcgatctcgtccgcgacgccctcgc 183772 Query: 401 ctccaccgggccc 413 |||| |||||||| Sbjct: 183771 ctcc-ccgggccc 183760
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 2e-24 Identities = 116/133 (87%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 281 cgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgccagtcgcct 340 |||||||||||| ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct: 34272509 cgtgcagtgggtgttcctgggctgccccggggtggggaagggcacctacgccagccgcct 34272450 Query: 341 ctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagctcgc 400 ||| | | ||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 34272449 ctcgcagatgctccgcgtgccccacatcgccaccggcgatctcgtccgcgacgccctcgc 34272390 Query: 401 ctccaccgggccc 413 |||| |||||||| Sbjct: 34272389 ctcc-ccgggccc 34272378 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 33013942 cggagaggaggcgccggccgg 33013962 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 24769819 cggagaggaggcgccggccgg 24769799 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 15137394 ccagtcgcctctcccgcctc 15137375
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 121 bits (61), Expect = 2e-24 Identities = 116/133 (87%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 281 cgtgcagtgggtcttcctcggctgccctggcgtcggcaagggcacctacgccagtcgcct 340 |||||||||||| ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct: 55124 cgtgcagtgggtgttcctgggctgccccggggtggggaagggcacctacgccagccgcct 55065 Query: 341 ctcccgcctcctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagctcgc 400 ||| | | ||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 55064 ctcgcagatgctccgcgtgccccacatcgccaccggcgatctcgtccgcgacgccctcgc 55005 Query: 401 ctccaccgggccc 413 |||| |||||||| Sbjct: 55004 ctcc-ccgggccc 54993
>ref|NM_129281.3| Arabidopsis thaliana ADK/ATPADK1; ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor AT2G37250 (ADK/ATPADK1) mRNA, complete cds Length = 1309 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 351 ctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagct 397 |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 277 ctcggcgttcctcacatcgccaccggcgatctcgtccgtgaagagct 323
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 351 ctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagct 397 |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 11427 ctcggcgttcctcacatcgccaccggcgatctcgtccgtgaagagct 11473
>gb|AY056092.1| Arabidopsis thaliana At2g37250/F3G5.4 mRNA, complete cds Length = 855 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 351 ctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagct 397 |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 223 ctcggcgttcctcacatcgccaccggcgatctcgtccgtgaagagct 269
>gb|AY052310.1| Arabidopsis thaliana At2g37250/F3G5.4 mRNA, complete cds Length = 1298 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 351 ctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagct 397 |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 266 ctcggcgttcctcacatcgccaccggcgatctcgtccgtgaagagct 312
>gb|AY045694.1| Arabidopsis thaliana At2g37250/F3G5.4 mRNA, complete cds Length = 1182 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 351 ctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagct 397 |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 272 ctcggcgttcctcacatcgccaccggcgatctcgtccgtgaagagct 318
>gb|AY085585.1| Arabidopsis thaliana clone 15831 mRNA, complete sequence Length = 1158 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 351 ctcggcgtgccccacatcgccaccggcgacctcgtccgcgacgagct 397 |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 250 ctcggcgttcctcacatcgccaccggcgatctcgtccgtgaagagct 296
>gb|AC148876.2| Pan troglodytes BAC clone CH251-50I16 from Y, complete sequence Length = 182194 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 38828 atgaaattatcatcaatctttt 38849
>gb|AC146453.3| Pan troglodytes BAC clone CH251-510F17 from Y, complete sequence Length = 215114 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 85203 atgaaattatcatcaatctttt 85182
>gb|AC147675.2| Pan troglodytes BAC clone CH251-6P20 from Y, complete sequence Length = 166567 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 133963 atgaaattatcatcaatctttt 133984
>dbj|BS000655.1| Pan troglodytes chromosome Y clone:PTB-215M20, complete sequences Length = 152092 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 50936 atgaaattatcatcaatctttt 50957
>dbj|BS000615.1| Pan troglodytes chromosome Y clone:PTBY-009P07, complete sequences Length = 105898 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 55311 atgaaattatcatcaatctttt 55332
>dbj|BS000609.1| Pan troglodytes chromosome Y clone:PTB-217K15, complete sequences Length = 146625 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 53459 atgaaattatcatcaatctttt 53438
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 21944891 atgaaattatcatcaatctttt 21944912 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 21643861 atgaaattatcatcaatctttt 21643840
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 cagcgcctgctccgcgccgcgg 141 |||||||||||||||||||||| Sbjct: 30273917 cagcgcctgctccgcgccgcgg 30273896 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 36603608 cggagaggaggcgccggccgg 36603628 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 33082935 gctccgcgccgcggcgtcctcgtc 33082958 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 26673419 gcgccgcggcgtcgtcgtcg 26673438 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgccaccggcgacctcgtcc 387 |||||||||||||||||||| Sbjct: 24665220 cgccaccggcgacctcgtcc 24665201 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ccgtcgccgcgggcaggaggcgca 183 ||||||||||||| |||||||||| Sbjct: 2402311 ccgtcgccgcggggaggaggcgca 2402288
>gb|AC105054.6| Homo sapiens BAC clone RP11-722I12 from 2, complete sequence Length = 203061 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 465 gaaattatcatcaatcttttatctaa 490 ||||||||||||||| |||||||||| Sbjct: 38053 gaaattatcatcaatattttatctaa 38078
>gb|AC073989.6| Homo sapiens BAC clone RP11-473L20 from 2, complete sequence Length = 99369 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 457 tttctgatgaaattatcatcaa 478 |||||||||||||||||||||| Sbjct: 52666 tttctgatgaaattatcatcaa 52645
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 cagcgcctgctccgcgccgcgg 141 |||||||||||||||||||||| Sbjct: 62236 cagcgcctgctccgcgccgcgg 62215
>gb|AC010135.3|AC010135 Homo sapiens BAC clone RP11-128D13 from Y, complete sequence Length = 176951 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 463 atgaaattatcatcaatctttt 484 |||||||||||||||||||||| Sbjct: 133510 atgaaattatcatcaatctttt 133531
>ref|XM_483548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 968 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 364 acatcgccaccggcgacctcgtccgcgac 392 ||||||||||||||| ||||| ||||||| Sbjct: 711 acatcgccaccggcggcctcggccgcgac 739
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 gaccgcggcggcgccggcctt 232 ||||||||||||||||||||| Sbjct: 44788 gaccgcggcggcgccggcctt 44768
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 81506 cggagaggaggcgccggccgg 81526
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 99204 cggagaggaggcgccggccgg 99184
>gb|AC117657.11| Mus musculus chromosome 15, clone RP23-299O23, complete sequence Length = 198005 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cgcgggggcggagaggaggcg 259 ||||||||||||||||||||| Sbjct: 131379 cgcgggggcggagaggaggcg 131399
>gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete sequence Length = 166178 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 gcgggggcggagaggaggcgc 260 ||||||||||||||||||||| Sbjct: 120251 gcgggggcggagaggaggcgc 120231
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 99543 cggagaggaggcgccggccgg 99563
>ref|XM_961291.1| PREDICTED: Tribolium castaneum similar to CG10185-PA (LOC654878), partial mRNA Length = 1530 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 tccgcgacgagctcgcctccaccgg 409 ||||||||||||||||| ||||||| Sbjct: 380 tccgcgacgagctcgccgccaccgg 404
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ccgcgccgcggcgtcgtcgtc 151 ||||||||||||||||||||| Sbjct: 1011431 ccgcgccgcggcgtcgtcgtc 1011451
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 50186 cggagaggaggcgccggccgg 50206
>ref|XM_688136.1| PREDICTED: Danio rerio similar to glucocorticoid induced transcript 1 (LOC564806), mRNA Length = 902 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cgcgggggcggagaggaggcg 259 ||||||||||||||||||||| Sbjct: 340 cgcgggggcggagaggaggcg 360
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 7389292 cggagaggaggcgccggccgg 7389272 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 22073056 gcgccgcggcgtcgtcgtcg 22073075
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 364 acatcgccaccggcgacctcgtccgcgac 392 ||||||||||||||| ||||| ||||||| Sbjct: 26898485 acatcgccaccggcggcctcggccgcgac 26898513 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 15414801 cggagaggaggcgccggccgg 15414781
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 11701676 cggagaggaggcgccggccgg 11701696 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 tcgtcgtcgacatcctccgtcgcc 167 ||||||||||||||||||| |||| Sbjct: 20955223 tcgtcgtcgacatcctccgccgcc 20955246
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cgcgccgcggcgtcgtcgtcg 152 ||||||||||||||||||||| Sbjct: 23954838 cgcgccgcggcgtcgtcgtcg 23954858 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 18227946 ccagtcgcctctcccgcctc 18227927 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 18220292 ccagtcgcctctcccgcctc 18220273
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 26587417 cggagaggaggcgccggccgg 26587437
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 116983 cggagaggaggcgccggccgg 117003
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 76874 cggagaggaggcgccggccgg 76894
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cgcgccgcggcgtcgtcgtcg 152 ||||||||||||||||||||| Sbjct: 84449 cgcgccgcggcgtcgtcgtcg 84469
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 129798 cggagaggaggcgccggccgg 129818
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 21578 cggagaggaggcgccggccgg 21598
>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0680C01 Length = 145580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 59835 cggagaggaggcgccggccgg 59855
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 100377 cggagaggaggcgccggccgg 100357
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 364 acatcgccaccggcgacctcgtccgcgac 392 ||||||||||||||| ||||| ||||||| Sbjct: 161275 acatcgccaccggcggcctcggccgcgac 161303
>dbj|AK108432.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-B01, full insert sequence Length = 968 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 364 acatcgccaccggcgacctcgtccgcgac 392 ||||||||||||||| ||||| ||||||| Sbjct: 711 acatcgccaccggcggcctcggccgcgac 739
>emb|BX936284.27| Zebrafish DNA sequence from clone DKEY-22A24 in linkage group 3, complete sequence Length = 224666 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 cgcgggggcggagaggaggcg 259 ||||||||||||||||||||| Sbjct: 170576 cgcgggggcggagaggaggcg 170556
>gb|AY110704.1| Zea mays CL16117_1 mRNA sequence Length = 973 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ccggcgacctcgtccgcgacg 393 ||||||||||||||||||||| Sbjct: 919 ccggcgacctcgtccgcgacg 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 281 cgtgcagtgggtcttcctcggctgccctggcg 312 |||||||||||| |||||||| ||||| |||| Sbjct: 945 cgtgcagtgggtgttcctcgggtgccccggcg 914
>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete sequence Length = 316981 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 gcgggggcggagaggaggcgc 260 ||||||||||||||||||||| Sbjct: 124630 gcgggggcggagaggaggcgc 124610
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 7459378 cggagaggaggcgccggccgg 7459358 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 22382967 gcgccgcggcgtcgtcgtcg 22382986
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 23523 cggagaggaggcgccggccgg 23543
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 31535 cggagaggaggcgccggccgg 31515
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggagaggaggcgccggccgg 267 ||||||||||||||||||||| Sbjct: 288155 cggagaggaggcgccggccgg 288135
>ref|XM_550108.1| Oryza sativa (japonica cultivar-group), mRNA Length = 962 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ccgtcgccgcgggcaggaggcgca 183 ||||||||||||| |||||||||| Sbjct: 29 ccgtcgccgcggggaggaggcgca 6
>ref|NM_195525.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0082N11.24), mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 988 ccagtcgcctctcccgcctc 969
>ref|NM_195600.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0036B06.12), mRNA Length = 642 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 379 ccagtcgcctctcccgcctc 360
>ref|NM_195598.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0036B06.14), mRNA Length = 642 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 379 ccagtcgcctctcccgcctc 360
>ref|XM_463474.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 642 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 291 gctccgcgccgcggcgtcctcgtc 314
>ref|NM_192433.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 229 gcgccgcggcgtcgtcgtcg 210
>ref|NM_192829.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1734 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgccaccggcgacctcgtcc 387 |||||||||||||||||||| Sbjct: 8 cgccaccggcgacctcgtcc 27
>ref|XM_470560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 667 gcgccgcggcgtcgtcgtcg 648
>ref|NM_185855.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 tcgtcgtcgacatcctccgtcgcc 167 ||||||||||||||||||| |||| Sbjct: 329 tcgtcgtcgacatcctccgccgcc 352
>gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis gene cluster, complete sequence Length = 87427 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gccgcggcgtcgtcgtcgacatcc 158 ||||| |||||||||||||||||| Sbjct: 85950 gccgccgcgtcgtcgtcgacatcc 85927
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gcggcgtcgtcgtcgacatc 157 |||||||||||||||||||| Sbjct: 104589 gcggcgtcgtcgtcgacatc 104608
>gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093C16, complete sequence Length = 206612 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 152147 ccagtcgcctctcccgcctc 152166 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 145253 ccagtcgcctctcccgcctc 145272
>gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0002L02, complete sequence Length = 165685 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 44286 ccagtcgcctctcccgcctc 44305 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 37392 ccagtcgcctctcccgcctc 37411
>ref|XM_873644.1| PREDICTED: Bos taurus similar to profilin 2 isoform b, transcript variant 3 (LOC539034), mRNA Length = 1950 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gcgggggcggagaggaggcg 259 |||||||||||||||||||| Sbjct: 155 gcgggggcggagaggaggcg 136
>ref|XM_584391.2| PREDICTED: Bos taurus similar to profilin 2 isoform b, transcript variant 1 (LOC539034), mRNA Length = 2270 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gcgggggcggagaggaggcg 259 |||||||||||||||||||| Sbjct: 155 gcgggggcggagaggaggcg 136
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 cgccgcggcgtcgtcgtcga 153 |||||||||||||||||||| Sbjct: 1180949 cgccgcggcgtcgtcgtcga 1180930
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gtgaccgcggcggcgccggccttc 233 ||||| |||||||||||||||||| Sbjct: 68341 gtgacggcggcggcgccggccttc 68364
>ref|XM_323529.1| Neurospora crassa OR74A related to secretion protein rsec8 [MIPS] (NCU04190.1) partial mRNA Length = 3336 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cgacgagctcgcctccaccg 408 |||||||||||||||||||| Sbjct: 2622 cgacgagctcgcctccaccg 2641
>ref|XM_956057.1| Neurospora crassa OR74A related to secretion protein rsec8 [MIPS] (NCU04190.1) partial mRNA Length = 3336 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cgacgagctcgcctccaccg 408 |||||||||||||||||||| Sbjct: 2622 cgacgagctcgcctccaccg 2641
>ref|XM_957469.1| Neurospora crassa OR74A hypothetical protein (NCU06300.1) partial mRNA Length = 585 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctggcgtcggcaagggcacc 326 |||||||||||||||||||| Sbjct: 53 ctggcgtcggcaagggcacc 72
>ref|XM_326154.1| Neurospora crassa OR74A hypothetical protein (NCU06300.1) partial mRNA Length = 585 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctggcgtcggcaagggcacc 326 |||||||||||||||||||| Sbjct: 53 ctggcgtcggcaagggcacc 72
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 111052 gcgccgcggcgtcgtcgtcg 111071
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 cgacctcgtccgcgacgagctcgc 400 |||||| ||||||||||||||||| Sbjct: 670803 cgacctggtccgcgacgagctcgc 670780
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14, complete sequence Length = 160587 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 153855 ccagtcgcctctcccgcctc 153836
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 30289 ccagtcgcctctcccgcctc 30270
>emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosmid contig 21D9 Length = 55380 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cgacgagctcgcctccaccg 408 |||||||||||||||||||| Sbjct: 44412 cgacgagctcgcctccaccg 44431
>emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BAC clone B13O20 Length = 65076 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cgacgagctcgcctccaccg 408 |||||||||||||||||||| Sbjct: 52431 cgacgagctcgcctccaccg 52412
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gtgggtcttcctcggctgcc 306 |||||||||||||||||||| Sbjct: 1745392 gtgggtcttcctcggctgcc 1745373
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 117809 ccagtcgcctctcccgcctc 117790
>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence Length = 159838 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 ctgatgaaattatcatcaatcttt 483 ||||||| |||||||||||||||| Sbjct: 24500 ctgatgatattatcatcaatcttt 24477
>emb|AJ748744.1| Haloferax volcanii hjc gene for holliday junction resolvase Length = 2000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ccggcgacctcgtccgcgac 392 |||||||||||||||||||| Sbjct: 1410 ccggcgacctcgtccgcgac 1391
>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0043E10, complete sequence Length = 124591 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 121611 gcgccgcggcgtcgtcgtcg 121592
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 77163 gcgccgcggcgtcgtcgtcg 77144
>gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0036B06, from Chromosome 10, complete sequence Length = 148263 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 92727 ccagtcgcctctcccgcctc 92708 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 85294 ccagtcgcctctcccgcctc 85275
>tpg|BK000370.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M90, complete sequence Length = 27925 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 20031 ccagtcgcctctcccgcctc 20012 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 12598 ccagtcgcctctcccgcctc 12579
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cggcgccggccttcccgttc 239 |||||||||||||||||||| Sbjct: 25804098 cggcgccggccttcccgttc 25804079
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 7885964 ccagtcgcctctcccgcctc 7885983 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 7878531 ccagtcgcctctcccgcctc 7878550 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 7483945 ccagtcgcctctcccgcctc 7483926
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gcggcgtcgtcgtcgacatc 157 |||||||||||||||||||| Sbjct: 19173571 gcggcgtcgtcgtcgacatc 19173590
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 9921520 ccagtcgcctctcccgcctc 9921539 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 9914626 ccagtcgcctctcccgcctc 9914645
>gb|AF507977.1| Enterococcus faecium plasmid pRUM, complete sequence Length = 24873 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 gtttctgatgaaattatcat 475 |||||||||||||||||||| Sbjct: 22618 gtttctgatgaaattatcat 22599
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgccaccggcgacctcgtcc 387 |||||||||||||||||||| Sbjct: 91183 cgccaccggcgacctcgtcc 91164
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 19845 gctccgcgccgcggcgtcctcgtc 19868
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 gcaggtgaccgcggcggcgccggc 229 |||||||| ||||||||||||||| Sbjct: 8922223 gcaggtgagcgcggcggcgccggc 8922200
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gaccgcggcggcgccggcct 231 |||||||||||||||||||| Sbjct: 1839221 gaccgcggcggcgccggcct 1839240
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 tcgtcgtcgacatcctccgtcgcc 167 ||||||||||||||||||| |||| Sbjct: 166013 tcgtcgtcgacatcctccgccgcc 166036
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 147133 gcgccgcggcgtcgtcgtcg 147152
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 20511 gcgccgcggcgtcgtcgtcg 20530
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tcgtccgcgacgagctcgcc 401 |||||||||||||||||||| Sbjct: 15717 tcgtccgcgacgagctcgcc 15736
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 4816 gcgccgcggcgtcgtcgtcg 4797
>dbj|AP006553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0061G23 Length = 144220 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 108318 ccagtcgcctctcccgcctc 108299 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 100664 ccagtcgcctctcccgcctc 100645
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ccgtcgccgcgggcaggaggcgca 183 ||||||||||||| |||||||||| Sbjct: 131361 ccgtcgccgcggggaggaggcgca 131338
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgccaccggcgacctcgtcc 387 |||||||||||||||||||| Sbjct: 33797 cgccaccggcgacctcgtcc 33778
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 149163 gctccgcgccgcggcgtcctcgtc 149186
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 tcgtcgtcgacatcctccgtcgcc 167 ||||||||||||||||||| |||| Sbjct: 83138 tcgtcgtcgacatcctccgccgcc 83161
>ref|XM_316842.2| Anopheles gambiae str. PEST ENSANGP00000001912 (ENSANGG00000001618), partial mRNA Length = 3660 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 cgacctcgtccgcgacgagc 396 |||||||||||||||||||| Sbjct: 2435 cgacctcgtccgcgacgagc 2454
>dbj|AK109203.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C05, full insert sequence Length = 621 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gcggcgtcgtcgtcgacatc 157 |||||||||||||||||||| Sbjct: 261 gcggcgtcgtcgtcgacatc 280
>dbj|AK106987.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A04, full insert sequence Length = 749 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 360 gcgccgcggcgtcgtcgtcg 341
>dbj|AK104274.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G12, full insert sequence Length = 905 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 403 gctccgcgccgcggcgtcctcgtc 426
>dbj|AK102823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108P10, full insert sequence Length = 962 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ccgtcgccgcgggcaggaggcgca 183 ||||||||||||| |||||||||| Sbjct: 29 ccgtcgccgcggggaggaggcgca 6
>dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118G04, full insert sequence Length = 1862 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgccgcggcgtcgtcgtcg 152 |||||||||||||||||||| Sbjct: 949 gcgccgcggcgtcgtcgtcg 930
>dbj|AK099116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034E12, full insert sequence Length = 908 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 406 gctccgcgccgcggcgtcctcgtc 429
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cgccaccggcgacctcgtccgcga 391 ||||||||||||| |||||||||| Sbjct: 3779600 cgccaccggcgacatcgtccgcga 3779623
>dbj|AK066763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074J19, full insert sequence Length = 2081 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cggcgccggccttcccgttc 239 |||||||||||||||||||| Sbjct: 957 cggcgccggccttcccgttc 938
>dbj|AK061501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E03, full insert sequence Length = 986 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 ccgtcgccgcgggcaggaggcgca 183 ||||||||||||| |||||||||| Sbjct: 36 ccgtcgccgcggggaggaggcgca 13
>dbj|AK059870.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E10, full insert sequence Length = 970 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gctccgcgccgcggcgtcgtcgtc 151 |||||||||||||||||| ||||| Sbjct: 468 gctccgcgccgcggcgtcctcgtc 491
>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16, complete sequence Length = 166820 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 gtttctgatgaaattatcat 475 |||||||||||||||||||| Sbjct: 21474 gtttctgatgaaattatcat 21455 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 gtttctgatgaaattatcat 475 |||||||||||||||||||| Sbjct: 20606 gtttctgatgaaattatcat 20587
>dbj|AP002768.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-673F18, complete sequence Length = 186084 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tggcgtcggcaagggcacct 327 |||||||||||||||||||| Sbjct: 112265 tggcgtcggcaagggcacct 112246
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 7891063 ccagtcgcctctcccgcctc 7891082 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 7883630 ccagtcgcctctcccgcctc 7883649 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ccagtcgcctctcccgcctc 350 |||||||||||||||||||| Sbjct: 7488144 ccagtcgcctctcccgcctc 7488125
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cggcgccggccttcccgttc 239 |||||||||||||||||||| Sbjct: 25732274 cggcgccggccttcccgttc 25732255
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cggcgccggccttcccgttc 239 |||||||||||||||||||| Sbjct: 25549 cggcgccggccttcccgttc 25530 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,431,983 Number of Sequences: 3902068 Number of extensions: 3431983 Number of successful extensions: 92707 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87383 Number of HSP's gapped (non-prelim): 5319 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
