Clone Name | bart28d10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TNAP3_MACFA (Q4R8W3) Tumor necrosis factor, alpha-induced protei... | 27 | 9.5 | 2 | TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protei... | 27 | 9.5 | 3 | GLAS_DROVI (Q24732) Protein glass | 27 | 9.5 |
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>TNAP3_MACFA (Q4R8W3) Tumor necrosis factor, alpha-induced protein 3 (EC| 3.-.-.-) Length = 790 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 292 RRAEKDPAGANPRPAPRSCSRVNWTVLDSEAPAACVVSA 176 +R++ DP+ P+P SC R ++APA C+ A Sbjct: 561 QRSKSDPSQLVRSPSPHSCHRAG-----NDAPAGCLSQA 594
>TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protein 3 (EC| 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20) Length = 790 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 292 RRAEKDPAGANPRPAPRSCSRVNWTVLDSEAPAACVVSA 176 +R++ DP+ P+P SC R ++APA C+ A Sbjct: 561 QRSKSDPSRLVRSPSPHSCHRAG-----NDAPAGCLSQA 594
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 268 GANPRPAPRSCSRVNWTVLDSEAPAACVV 182 GA+ P P CS++NWT + + A V+ Sbjct: 286 GADGGPVPMQCSQMNWTPPSNSSAAVNVL 314 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,371,598 Number of Sequences: 219361 Number of extensions: 271052 Number of successful extensions: 1379 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1362 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1379 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)