Clone Name | bart28d09 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CSH_ARTSP (P32400) N-carbamoylsarcosine amidase (EC 3.5.1.59) (N... | 28 | 5.7 | 2 | TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein | 28 | 5.7 | 3 | NRFC_SHIFL (P0AAK9) Protein nrfC precursor | 28 | 7.4 | 4 | NRFC_ECOLI (P0AAK7) Protein nrfC precursor | 28 | 7.4 | 5 | NRFC_ECO57 (P0AAK8) Protein nrfC precursor | 28 | 7.4 | 6 | ROUGH_DROME (P10181) Homeobox protein rough | 27 | 9.7 |
---|
>CSH_ARTSP (P32400) N-carbamoylsarcosine amidase (EC 3.5.1.59)| (N-carbamoylsarcosine amidohydrolase) (CSHASE) Length = 264 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +2 Query: 17 RTYSSPSQGLLLFLTCAYIDTLSQPAMSAAACVSFCPSPASSRHGAGPIV 166 R + P L LFLT IDTL +AA CV A ++ G PI+ Sbjct: 146 RASAFPGTNLELFLTSNRIDTLIVTGATAAGCVRHTVEDAIAK-GFRPII 194
>TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein| Length = 312 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -2 Query: 147 WREDAGEGQKETQAAADMAGWLSVSMYA 64 W E AGE +KE AAA AG YA Sbjct: 177 WTEGAGEQEKEAVAAAGAAGGKGEERYA 204
>NRFC_SHIFL (P0AAK9) Protein nrfC precursor| Length = 223 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 104 AACVSFCPSPASSRHGAGPIVDV 172 A CV CP+ AS R A IVDV Sbjct: 98 APCVDVCPTGASFRDAASGIVDV 120
>NRFC_ECOLI (P0AAK7) Protein nrfC precursor| Length = 223 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 104 AACVSFCPSPASSRHGAGPIVDV 172 A CV CP+ AS R A IVDV Sbjct: 98 APCVDVCPTGASFRDAASGIVDV 120
>NRFC_ECO57 (P0AAK8) Protein nrfC precursor| Length = 223 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 104 AACVSFCPSPASSRHGAGPIVDV 172 A CV CP+ AS R A IVDV Sbjct: 98 APCVDVCPTGASFRDAASGIVDV 120
>ROUGH_DROME (P10181) Homeobox protein rough| Length = 350 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 320 FPRHRSQQQQQHLGHCHY 267 +P+H SQQ QQH H H+ Sbjct: 114 YPQHPSQQHQQHHHHHHH 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,857,444 Number of Sequences: 219361 Number of extensions: 356323 Number of successful extensions: 1192 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1190 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)