Clone Information

BLAST Search Result

Clone Name	bart28d05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)	37	0.036
2	FER_THEMA (P46797) Ferredoxin	34	0.18
3	MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (P...	34	0.23
4	FAS2_RHOFA (P46374) Ferredoxin fas2	33	0.40
5	M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kin...	33	0.40
6	SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-as...	33	0.52
7	SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)	33	0.52
8	MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi...	32	0.67
9	FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leuc...	32	0.67
10	SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem...	32	0.88
11	SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs...	32	0.88
12	FER_THELI (P29604) Ferredoxin	32	1.2
13	TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibr...	32	1.2
14	MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-pro...	32	1.2
15	Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916	32	1.2
16	TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibr...	32	1.2
17	K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin...	32	1.2
18	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	31	1.5
19	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	31	1.5
20	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	31	1.5
21	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	31	1.5
22	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	31	1.5
23	BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7	31	1.5
24	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	31	2.0
25	PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)	31	2.0
26	VG03_ICHV1 (Q00115) Hypothetical gene 3 protein	31	2.0
27	K1683_HUMAN (Q9H0B3) Protein KIAA1683	30	2.6
28	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	30	2.6
29	VRP1_YEAST (P37370) Verprolin	30	2.6
30	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	2.6
31	CSKI2_MOUSE (Q8VHK1) Caskin-2	30	3.3
32	BAB2_DROME (Q9W0K4) Protein bric-a-brac 2	30	3.3
33	WFDC5_HUMAN (Q8TCV5) WAP four-disulfide core domain protein 5 pr...	30	3.3
34	PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase...	30	3.3
35	DEND_HUMAN (O94850) Dendrin	30	3.3
36	BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 prec...	25	4.0
37	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	4.4
38	MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-pro...	30	4.4
39	CUT2_CAEEL (P34682) Cuticlin-2 precursor	30	4.4
40	K2CA_BOVIN (P04263) Keratin, type II cytoskeletal 68 kDa, compon...	30	4.4
41	AROA_BRUSU (Q8G3C4) 3-phosphoshikimate 1-carboxyvinyltransferase...	30	4.4
42	AROA_BRUAB (P0C100) 3-phosphoshikimate 1-carboxyvinyltransferase...	30	4.4
43	AROA_BRUA2 (Q2YPN6) 3-phosphoshikimate 1-carboxyvinyltransferase...	30	4.4
44	SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)	30	4.4
45	ASCL2_RAT (P19360) Achaete-scute homolog 2	30	4.4
46	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	29	5.7
47	SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)	29	5.7
48	ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (A...	29	5.7
49	ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 ...	29	5.7
50	MMPS3_MYCTU (P65378) Putative membrane protein mmpS3	29	5.7
51	MMPS3_MYCBO (P65379) Putative membrane protein mmpS3	29	5.7
52	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	29	5.7
53	AROA_BRUME (Q8YEG1) 3-phosphoshikimate 1-carboxyvinyltransferase...	29	5.7
54	PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing pr...	29	5.7
55	VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)	29	5.7
56	MYCN_HUMAN (P04198) N-myc proto-oncogene protein	29	5.7
57	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	29	5.7
58	FER1_STRGO (P18324) Ferredoxin-1 (Fd-1)	29	7.5
59	UBR1_SCHPO (O60152) Ubiquitin-protein ligase E3 component N-reco...	29	7.5
60	IF2_DESPS (Q6AJY4) Translation initiation factor IF-2	29	7.5
61	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	29	7.5
62	TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3...	29	7.5
63	ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat prot...	29	7.5
64	SP5_MOUSE (Q9JHX2) Transcription factor Sp5	29	7.5
65	GCSP_STRAW (Q827D7) Glycine dehydrogenase [decarboxylating] (EC ...	29	7.5
66	FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolas...	24	8.1
67	FER_PYRAB (Q9UXY2) Ferredoxin	28	9.7
68	PERT_BORPE (P14283) Pertactin precursor (P.93) [Contains: Outer ...	28	9.7
69	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	28	9.7
70	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	28	9.7
71	POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocaps...	28	9.7
72	CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associate...	28	9.7

>FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)|
          Length = 59

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 VDHR-CIDCATCRWMAPEVFKRVDG-QSAVAAQPTSEETRTKALQALLSCPTSSI 405
           +DH  CI C +C  + PEVF  +DG + A+   P S  T   A  A+ +CP  +I
Sbjct: 4   IDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDS--TAECAQDAIDACPVEAI 56

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>FER_THEMA (P46797) Ferredoxin|
          Length = 60

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 259 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSIHTDK 417
           CI C  C  + P+VF+  D   A   QP ++    K   A  SCPT +I  ++
Sbjct: 10  CIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAK--DAADSCPTGAISVEE 60

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>MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (Protein string)|
           (Cdc25-like protein)
          Length = 479

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 27/91 (29%), Positives = 36/91 (39%)
 Frame = +2

Query: 29  GSSHRRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST 208
           G S RR ++       ES   ST  PP  +P     C +   PP S   +P+    R   
Sbjct: 168 GLSMRRPSVRRCLSMTESNTNSTTTPPPKTPETARDCFKRPEPPASANCSPI-QSKRHRC 226

Query: 209 AGGARRTCPATSSSITGASTVPPAGGWLRRC 301
           A   +  CPA S       + PP    LR+C
Sbjct: 227 AAVEKENCPAPSPLSQVTISHPPP---LRKC 254

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>FAS2_RHOFA (P46374) Ferredoxin fas2|
          Length = 304

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +1

Query: 250 DHRCIDCATCRWMAPEVFKRV-DGQSAVAAQPTSEETRTKALQALLSCPTSSIHTDKPAQ 426
           + RC     C  +APEVF++  DG   +     S +  +    A  SCP ++I  ++ A 
Sbjct: 7   ERRCFGSGQCVLVAPEVFEQSNDGTVTLLVDKPSPDNHSLVRAAARSCPATAIRFEENAM 66

Query: 427 DMLQVQNTFPLPIDDDLP 480
                + ++     DDLP
Sbjct: 67  RQEPTEFSY-----DDLP 79

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>M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kinase 14 (EC|
           2.7.11.25) (NF-kappa beta-inducing kinase)
           (Serine/threonine-protein kinase NIK) (HsNIK)
          Length = 947

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
 Frame = +2

Query: 5   HKLSSARLGSSHRRSALETENFTRESPWRSTFAPP-HPSPPRRLTCVRADAPPLSLWSTP 181
           H++S+A LG    R+  +      +SPWR  +  P HP P +        A P  L    
Sbjct: 640 HRVSAAELGGKVNRALQQVGGL--KSPWRGEYKEPRHPPPNQANYHQTLHAQPRELSPRA 697

Query: 182 LCPLPRRSTAGGARRTCPATSSSITGASTVPP 277
             P P   T G A +  P         +  PP
Sbjct: 698 PGPRPAEETTGRAPKLQPPLPPEPPEPNKSPP 729

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>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 38  HRRSALETENFTRES--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 208
           H+   L  E+ T+E   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589

Query: 209 AGGARRTCP 235
              A    P
Sbjct: 590 VVSAVPVMP 598

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>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 38  HRRSALETENFTRES--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 208
           H+   L  E+ T+E   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 528 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTT 587

Query: 209 AGGARRTCP 235
              A    P
Sbjct: 588 VVSAVPVMP 596

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>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = +2

Query: 80  SPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 259
           S W +  +PP   PPR  +     APPLS     L  LPR ++  G+ R  P   ++   
Sbjct: 655 SHWSALLSPP--VPPRPPSSGPPPAPPLS---PALSGLPRPASPYGSLRRHPPPWAAPAH 709

Query: 260 ASTVPPAGGW 289
               P A GW
Sbjct: 710 VPPAPQASGW 719

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>FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 18/101 (17%)
 Frame = +2

Query: 29  GSSHRRSALETENFTRESPWRSTFAPPHPS-PPRRLTCVRADAPPLSLWSTPL------- 184
           G   RR+    E  +  S W+ T  PP P  PPRR   + A  PP  +   P        
Sbjct: 141 GPGRRRADNGEEGASLGSGWKLTEEPPLPPPPPRRKGPLPAGPPPEDVPGPPKRKEREAG 200

Query: 185 --CPLPRRSTAGGARR--------TCPATSSSITGASTVPP 277
              P PR+   GG  R         C    S   G   +PP
Sbjct: 201 NEPPTPRKKVKGGRERHLKKVGGDACLLRGSDPGGPGLLPP 241

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>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
 Frame = +2

Query: 5    HKLSSARLGSSHRRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP- 181
            H     R GS    SA  T       P  S F    P P   +  +R D PP    + P 
Sbjct: 777  HGPQPPRKGSEPLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPS 836

Query: 182  -----LCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 286
                   P PR    GG+RR    T  +  G  T  P+GG
Sbjct: 837  GRPALSAPAPRLG-VGGSRRLPFPTHRAPPGLLTRVPSGG 875

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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -2

Query: 294 RSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGG 154
           R   P+  +V  P + EE  G     PP    RGRG    +  D GG
Sbjct: 687 RKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGG 733

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>FER_THELI (P29604) Ferredoxin|
          Length = 59

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 259 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 405
           CI C  C  + P+VF+  D   A A    +E     A +A  SCPT +I
Sbjct: 10  CIGCGVCASICPDVFEMDDDGKAKAL--VAETDLECAKEAAESCPTGAI 56

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>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 458

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -2

Query: 273 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 97
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 106 GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 162

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>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1798

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
 Frame = -2

Query: 285  PPAGGTVDAPV----------IDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQ 136
            PP+G  V  PV          +DEE  G    + PA+E RGRG S +       A +   
Sbjct: 963  PPSGEGVSGPVTEHSGEQRPKLDEEAVGRSSGSSPAMETRGRGTSQLAEGATAKAISDLA 1022

Query: 135  VSRRGGEGCGGAKVERHGDSRVKFSVSSA 49
            V R       G   E+     V   + SA
Sbjct: 1023 VRRARHRLLSGDSTEKRTARPVNKVIKSA 1051

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>Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916|
          Length = 629

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +2

Query: 104 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST-AGGARRTCPATSSSITGASTV--P 274
           PP P+ PR  +  R  APP  ++ T    +P   T A G R      S S+  A+ V  P
Sbjct: 349 PPRPASPRLRSSPRPSAPPSKIFRTRALRVPGVGTGAPGRRSRARNASGSVVAAAEVSDP 408

Query: 275 PAGG 286
            A G
Sbjct: 409 DAHG 412

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>TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 382

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -2

Query: 273 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 97
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 48  GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 104

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>K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)|
           (Keratin-1) (K1) (67 kDa cytokeratin)
          Length = 627

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -2

Query: 192 RGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDSRVKFSVSSALR 43
           RG SG      GG+   +    RGG   GG  V+  G S VKF  +S  R
Sbjct: 575 RGGSGGGGGSSGGSYGGSSGGGRGGSSSGGGGVKSSGSSTVKFVSTSYSR 624

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPPSMAGS 366

Query: 263 STVPP 277
           +  PP
Sbjct: 367 TAPPP 371

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R        PP  ++  PL  LP  + +G      P    S++G+
Sbjct: 314 PSRAPTAAPPPPPPSRPGVGAPPPPPNRMYPPPLPALPSSAPSGPPP---PPPPLSVSGS 370

Query: 263 STVPP 277
              PP
Sbjct: 371 VAPPP 375

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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +2

Query: 80  SPWR-STFAPPHPSPPRRL---TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSS 247
           SP R ST +  HP+PP R    T     +PP +       P+ R +    +R T P   S
Sbjct: 115 SPARPSTESVAHPAPPTRPANPTPTPTSSPPKTAARPINAPISRPAIP--SRPTAPTPRS 172

Query: 248 SITGASTVPP-AGGWLRRCSRESTAS 322
           +   +S VPP AGG   R  + ST S
Sbjct: 173 ANKPSSPVPPSAGGKDPRAGQTSTTS 198

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 30/104 (28%), Positives = 36/104 (34%), Gaps = 5/104 (4%)
 Frame = +2

Query: 179 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG-----WLRRCSRESTASXXXXXXX 343
           P  PLP R+   G RR   A      GA+ VP AGG      LRR   +   S       
Sbjct: 79  PPGPLPGRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAAS 138

Query: 344 XXXXXXXXXXXXCSLALHPLSTPTSLHRTCSKCRTRSLSPSTMI 475
                          A      P S   + S C TRSL   T++
Sbjct: 139 SSSSSSAAAASHSPGA---AGLPASCSASASLC-TRSLDRKTLL 178

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
 Frame = +2

Query: 11  LSSARLGSSHRRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLS--LWSTPL 184
           +SS    S  R   L +  F    P   T  PP P PPR  +   + +P  S  +   P 
Sbjct: 309 VSSGLPESGTRSPGLLSPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRSPCVPPAPE 368

Query: 185 CPLPRRSTAGGARRTCPA----TSSSITGASTVP 274
             LPR  T G     CP+    T  S    +T P
Sbjct: 369 VALPRPVTQGAGPGKCPSPNLQTQESPVATATSP 402

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>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7|
          Length = 1132

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +2

Query: 77  ESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 256
           + P RS   P + S     T  +A  PP+ L S    P    STAG  R+T  A +++ T
Sbjct: 787 QHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAAAAATTT 846

Query: 257 GASTVPPA 280
             +T   A
Sbjct: 847 STATAAAA 854

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPLSMAGS 366

Query: 263 STVPP 277
           +  PP
Sbjct: 367 TAPPP 371

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>PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 398

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = -3

Query: 404 IEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHLQVAQSMHR*STKKSPDTF 225
           I DVG +S A      V + +  AAT  W   L    GA  +Q        + K + +  
Sbjct: 293 ILDVGPQSVA-----RVHAAIDDAATLVWNGPL----GAFEMQPFDRGTVAAAKHAAERT 343

Query: 224 CGRRLLSSAGGGDTVA 177
             ++L+S AGGGDTVA
Sbjct: 344 KAKKLISIAGGGDTVA 359

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>VG03_ICHV1 (Q00115) Hypothetical gene 3 protein|
          Length = 302

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +2

Query: 104 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 256
           PP PSP    TC    + P SL S+P+ P P  S    A    P+ +  IT
Sbjct: 182 PPPPSPSDDTTC-EIPSLPSSLVSSPVNPAPMYSPVSDAPLNTPSPNMMIT 231

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>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
 Frame = +2

Query: 95  TFAPPHPSPPRRLTCVRADA-----PPLSLWSTPLCPLPRR---------STAGGARRTC 232
           T  PP  SP  ++T ++  A     P ++  +   CP+P           S  G  R+TC
Sbjct: 360 TTTPPKTSPVPKVTIIKTPAQMYPGPTVTKTAPHTCPMPTMTKIQVHPTASRTGTPRQTC 419

Query: 233 PAT 241
           PAT
Sbjct: 420 PAT 422

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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = +2

Query: 107  PHPSPPRRLTCVRADAPPLSLWSTPLCPL-----PRRSTAGGARRTCPATSSSITGASTV 271
            P PSPPR   C+ AD   LS  S  +  L     P R   G A+   PA    I G  + 
Sbjct: 2543 PRPSPPRPDVCM-ADPEGLSSESGRVERLREKGRPGRRAPGRAKPASPARRLDIRGKRSP 2601

Query: 272  PPAGGWLRRCSR 307
             P  G + R SR
Sbjct: 2602 TPGKGPVDRTSR 2613

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 17/88 (19%)
 Frame = +2

Query: 65  NFTRESPWRSTFAPPHPS----PPRRLTCVRADAPP-------------LSLWSTPLCPL 193
           N  + +P   T APP P+    PP + + + A  PP             LS  S PL PL
Sbjct: 366 NSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFSTSSALSASSIPLAPL 425

Query: 194 PRRSTAGGARRTCPATSSSITGASTVPP 277
           P            P+ ++S+  A   PP
Sbjct: 426 PPPPP--------PSVATSVPSAPPPPP 445

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 29/88 (32%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
 Frame = +2

Query: 32  SSHRRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP------LCPL 193
           S  RRS        R SP  +   PP P PPRR    R    P     TP        P 
Sbjct: 556 SRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRR----RRSPTPPPRRRTPSPPPRRRSPS 611

Query: 194 PRRSTAGGARRTCPATSSSITGASTVPP 277
           PRR +    RR  P+       AS  PP
Sbjct: 612 PRRYSPPIQRRYSPSPPPKRRTASPPPP 639

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>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = +2

Query: 71   TRESPWRSTFA------PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTC 232
            TR +P   +FA       P P PP+RL+ V     P SL  T     P+    G  RRT 
Sbjct: 847  TRGTPRSQSFALRARRKGPPPPPPKRLSSVSGSTEPPSLDGT---SGPKEGATGPRRRTL 903

Query: 233  PATSSSITGASTVP 274
                S  TG S  P
Sbjct: 904  ----SEPTGPSESP 913

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>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2|
          Length = 1067

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = -2

Query: 231 HVLRAPPAVERRGRGHSGVDHRDRG---GASARTQVSRRGGEGCGGAKVERHGDSRVKFS 61
           H + +  A    G G +G      G   GASA T  +   G G G A    H D  +K  
Sbjct: 511 HAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPE 570

Query: 60  VSSALRL*DEPRRAEL 13
           ++  +R   E  RA++
Sbjct: 571 IAEMIR---EEERAKM 583

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>WFDC5_HUMAN (Q8TCV5) WAP four-disulfide core domain protein 5 precursor|
           (Putative protease inhibitor WAP1)
          Length = 224

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 177 RHCVPSPGARQQAAPAERVRRLLRRSPVHRLCHLQVDGSG 296
           R CVP    +  + P +++R L   SP++ LCH   D SG
Sbjct: 68  RQCVPRVSVKLGSCPEDQLRCL---SPMNHLCHKDSDCSG 104

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>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +1

Query: 256 RCIDCATCRWMAPEVFKRVDGQSAV--AAQPTSEETRTKALQALLS-CPTSSIHTDKPA 423
           +C+    C   APEVF + D    V   A PTS  TR  A +A  +  P SS    +PA
Sbjct: 9   QCVGAGQCVLNAPEVFDQDDDGVVVLLRADPTSGTTRRSARRATCARRPRSSSRRTEPA 67

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>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -1

Query: 454 GTCSALGACPVQACRCG*RM*GKRARPAVPWSWFPRRWVAPPRRTGRRLS*TPPEP 287
           G+ +A    P  A R    + G R        WFP+ W+  P++   R S T P P
Sbjct: 295 GSATAAPCAPHPAPRSRHHLKGSREGKEGEQIWFPKCWIPSPKKQPPRHSQTLPRP 350

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>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor|
          Length = 1572

 Score = 24.6 bits (52), Expect(2) = 4.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 189  PSPGARQQAAPAERVRRLLRRSP 257
            P+P ARQ   P ER R + R  P
Sbjct: 1416 PTPSARQVPEPGERSRTMPRTVP 1438



 Score = 23.5 bits (49), Expect(2) = 4.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 77   ESPWRSTFAPPHPSPPRR 130
            ++P+  TF PP P+P  R
Sbjct: 1404 QNPYGMTFQPPPPTPSAR 1421

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 37/133 (27%), Positives = 50/133 (37%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R T +PP   PP+R    RA   P S       P P++ ++  A+R  P+ SS     
Sbjct: 603 PKRRTASPP--PPPKR----RASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKG 656

Query: 263 STVPPAGGWLRRCSRESTASXXXXXXXXXXXXXXXXXXXCSLALHPLSTPTSLHRTCSKC 442
           S  PP+     R +RE+ +                       A H  S+P  L R  S  
Sbjct: 657 S--PPS-----RSNRETRSPPQNKRDSPSPRPR---------ASHTSSSPPPLRRGASAS 700

Query: 443 RTRSLSPSTMIFP 481
             R  SPS    P
Sbjct: 701 PQRRQSPSPSTRP 713



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
 Frame = +2

Query: 74  RESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAG----GARRTCPAT 241
           R SP       P P P RR    R  +PP+    +P  P P+R TA       RR  P+ 
Sbjct: 564 RRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSP-SPPPKRRTASPPPPPKRRASPSP 622

Query: 242 SSSITGASTVPP 277
            S    + + PP
Sbjct: 623 QSKRRVSHSPPP 634

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>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1734

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
 Frame = -2

Query: 285  PPAGGTVDAPV----------IDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQ 136
            PP+G     PV          +DEE  G   R  PA+E RGRG   +       A +   
Sbjct: 901  PPSGEGSSRPVPERPLERQLKLDEEPPGQSSRCCPALETRGRGTPQLAEEATAKAISDLA 960

Query: 135  VSRRGGEGCGGAKVERHGDSRVKFSVSSA 49
            V R       G  +E+     V   + SA
Sbjct: 961  VRRARHRLLSGDSIEKRTTRPVNKVIKSA 989

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>CUT2_CAEEL (P34682) Cuticlin-2 precursor|
          Length = 231

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = +2

Query: 101 APPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT----GAST 268
           APP P PP    C     PPL L    L  L   S  GG     P  ++ I     G +T
Sbjct: 30  APPPPPPP--CGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAPAGGYAT 87

Query: 269 VP--PAGGW 289
            P  P GG+
Sbjct: 88  APAAPVGGY 96

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>K2CA_BOVIN (P04263) Keratin, type II cytoskeletal 68 kDa, component IA|
           (Fragment)
          Length = 182

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -2

Query: 201 RRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDSRVKFSVSSALR 43
           R  RG+  +D    GG++ R  VS  GG  C  + V   G  RV  S S + R
Sbjct: 126 RASRGNLALDSSSGGGSAVRGSVSNSGG-SCAVSGVGGRGSVRVTQSSSQSQR 177

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>AROA_BRUSU (Q8G3C4) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 210 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDSRVKFS 61
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVATHLDHRIAMS 406

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>AROA_BRUAB (P0C100) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 210 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDSRVKFS 61
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVATHLDHRIAMS 406

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>AROA_BRUA2 (Q2YPN6) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 210 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDSRVKFS 61
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVATHLDHRIAMS 406

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>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 6/100 (6%)
 Frame = +2

Query: 5    HKLSSARLGSSHRRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP- 181
            H     R GS    SA  T       P  + F    P P   +  +R D PP    + P 
Sbjct: 806  HGPQPPRKGSEPLASAPFTSRPPASEPGAALFVDSSPMPRDCVPPLRLDVPPDGKRAAPS 865

Query: 182  -----LCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 286
                   P PR   +G  R   P T  +  G  T  P+GG
Sbjct: 866  GRPALSAPAPRLGVSGSRRLPFP-THRAPPGLLTRVPSGG 904

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>ASCL2_RAT (P19360) Achaete-scute homolog 2|
          Length = 260

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = +2

Query: 104 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTA---GGARRTCPATSSSITGASTV- 271
           PPHP P    +C    AP       P+   P  + +   GGA      TSS + GA T  
Sbjct: 41  PPHPVPREHFSC---GAP------KPVAGAPALNASLMDGGALPRLVPTSSGVAGACTAR 91

Query: 272 -PPAGGWLRRCSR 307
             P    L RCSR
Sbjct: 92  RRPPSPELLRCSR 104

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 262
           P R+  A P P PP R +      PP  ++  P   LP  + +G      P    S+ G 
Sbjct: 314 PSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGP-----PPPPPSVLGV 368

Query: 263 STVPP 277
             V P
Sbjct: 369 GPVAP 373

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>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)|
          Length = 608

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
 Frame = +3

Query: 225 ERVRRLLRRSPVHRLCHLQVDGSGGVQESRRPVRRGGATHLRGNQ---DQGTAGLALLPY 395
           ER+RR  + SP+ +       G+GG Q S    +R    HL G+    DQG    +    
Sbjct: 155 ERMRRQ-QSSPLLQTTSSPAPGAGGFQRSYSTTQRQHHPHLGGDSYDADQGLLSASYANM 213

Query: 396 ILYPHRQACTGH---APSAEHVPSPHRR*SS 479
           +  P R     H    P  +  P  H++ +S
Sbjct: 214 LQLPQRPHSPAHYAVPPQQQQHPQIHQQHAS 244

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>ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 62   ENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCP 190
            E+FT+  P  S F PP PSP    + +  D   L  W+T L P
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPLSPDEDSLLAWNTSLPP 1618

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>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
 Frame = +2

Query: 62   ENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA------- 220
            E+FT+  P  S F PP PSP    + V  D   L  W+  L P     T   A       
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPTAGPETWTSAPSLPRLV 1635

Query: 221  ----RRTCPATSSSITGASTV 271
                R TC A  +  +  S+V
Sbjct: 1636 HEPVRCTCSAQGTGFSCPSSV 1656

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>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 95  TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 259
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

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>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 95  TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 259
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

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>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 22/82 (26%), Positives = 30/82 (36%)
 Frame = +2

Query: 41   RRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA 220
            ++ + +T    R  P R    P  P+PP+R        PP    S    P P R      
Sbjct: 1096 QKDSSQTLEPKRPPPPRPVAPPARPAPPQR------PPPPSGARS----PAPARERVWST 1145

Query: 221  RRTCPATSSSITGASTVPPAGG 286
            R+          G S +PP GG
Sbjct: 1146 RKAQERPRRDNLGGSQLPPQGG 1167

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>AROA_BRUME (Q8YEG1) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 210 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDSRVKFS 61
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVGTHLDHRIAMS 406

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>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 179 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 286
           P  PLP R+   G RR   A   +  GA+ VP AGG
Sbjct: 59  PPGPLPGRAGGTGRRRRRGAPQPAAGGAAPVPAAGG 94

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>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 379

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +2

Query: 104 PPHPSPPRRL--TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPP 277
           PP P PP  L  + V A A        P  PLP     GG     P  +++I GA     
Sbjct: 178 PPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAK---- 233

Query: 278 AGGWLRRCSRESTAS 322
               LR+ S++  AS
Sbjct: 234 ----LRKVSKQEEAS 244

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>MYCN_HUMAN (P04198) N-myc proto-oncogene protein|
          Length = 464

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = -2

Query: 312 DSLEHLRSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQV 133
           + L+H R  P AG T  +P      AG    A PA    GRGH G     R GA+   ++
Sbjct: 132 EKLQHGRGPPTAGSTAQSPG-----AG---AASPA----GRGHGGAAGAGRAGAALPAEL 179

Query: 132 SRRGGE 115
           +    E
Sbjct: 180 AHPAAE 185

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +2

Query: 41   RRSALETENFTRESPWRSTFAPPHP-SPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGG 217
            R S  ET    R    R    P  P +PPRR   ++   PP  +   P  PL +      
Sbjct: 921  RESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPK 980

Query: 218  ARRTCP--ATSSSITGASTVPPAG 283
            A +  P       + G    PP G
Sbjct: 981  APKPDPLKIAKGKLAGPKETPPNG 1004

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>FER1_STRGO (P18324) Ferredoxin-1 (Fd-1)|
          Length = 68

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +1

Query: 259 CIDCATCRWMAPEVFKRVDGQ--SAVAAQPTSEETRTKALQALLSCPTSSI 405
           C+    C   AP VF + D    + + A+P +++ R  A +A   CP+ ++
Sbjct: 11  CVGAGLCALTAPGVFDQDDDGIVTVLTAEPAADDDRRTAREAGHLCPSGAV 61

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>UBR1_SCHPO (O60152) Ubiquitin-protein ligase E3 component N-recognin-1 (EC|
           6.-.-.-) (N-end-recognizing protein)
          Length = 1958

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = -3

Query: 428 SCAGLSVWIEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHLQVAQ-SMHR* 252
           SCA L  W+ D+   S  C      SS +       W   L N+     L +   ++   
Sbjct: 325 SCAVLLEWLADIAGSS-ICGKRNYFSSVICKELVRPWNCGLHNSDLTFRLSLRSLALPEI 383

Query: 251 STKKSPDTFCGRRLLSSAGGGDTVAWTTETE 159
               SPD F     ++S+G  DT +   ET+
Sbjct: 384 VAIDSPDIFLNEDHINSSGPSDTSSHMLETD 414

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>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2|
          Length = 939

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 113 PSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPAT 241
           PS PRR    +   PP++    P  P P RS  G  +   PAT
Sbjct: 248 PSRPRR----KPTRPPVNRSPRPSTPSPNRSAGGPPKPAAPAT 286

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 23/56 (41%), Positives = 24/56 (42%)
 Frame = +2

Query: 113 PSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPPA 280
           P PP  L    AD PP      P  P P R T+       PA  S  TGA T PPA
Sbjct: 767 PKPPATLG---ADGPP------PGPPTPPRRTSRAPIEPTPA--SEATGAPTPPPA 811

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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
 Frame = +2

Query: 35  SHRRSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAP--PLSLWSTPLCPLPRRST 208
           S RRS+     F+  S    +F+P    PP        D P  P +  + P  P+ RR  
Sbjct: 184 SGRRSSPPPPGFSGPSLSSCSFSPSSSPPPP------GDLPLSPSAFSAAPGTPVTRRDP 237

Query: 209 AGGARRTCPATSSSITGASTVPPAGGWLRRCSRESTAS 322
               +  CP+   S T ++   P GG  R  S  S  S
Sbjct: 238 N---QACCPSCRRSTTPSTIWGPLGGLARSPSAHSLGS 272

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>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 667

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/70 (31%), Positives = 29/70 (41%)
 Frame = +2

Query: 77  ESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 256
           + P R++ A P P PPR       +APP SL  +        STA       P    +I 
Sbjct: 274 QGPPRTSLALPPPLPPR-------EAPPPSLPDS-------NSTALATSAQTPTVRKTIV 319

Query: 257 GASTVPPAGG 286
             +T PP  G
Sbjct: 320 TLNTPPPTTG 329

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>SP5_MOUSE (Q9JHX2) Transcription factor Sp5|
          Length = 398

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
 Frame = +2

Query: 83  PWRSTFAPPHPSPPRRLTCVRADAPP----LSLWSTPLCPLPRRSTAGGARRTCPATSSS 250
           P  S   PP P PP   TC +    P    L  WS P      +S AG      P T  S
Sbjct: 157 PGYSNLLPPPPPPPPPPTCRQLSPAPAPDDLPWWSIP------QSGAGPGSSGVPGT--S 208

Query: 251 ITGASTVPP 277
           ++ A   PP
Sbjct: 209 LSSACAGPP 217

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>GCSP_STRAW (Q827D7) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 961

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 401 EDVGQESKACSALVLVSSEVGCAATADWPS 312
           ED+G+  + C A++ + +EV    + +WP+
Sbjct: 864 EDLGELDRFCEAMIAIRAEVEKVGSGEWPA 893

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>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC|
           3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin
           specific-processing protease FAF) (Deubiquitinating
           enzyme FAF) (Protein fat facets)
          Length = 2778

 Score = 23.9 bits (50), Expect(2) = 8.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 197 RRSTAGGARRTCPATSSSITGAST 268
           RR T G    T P++SSS T  +T
Sbjct: 6   RRHTTGQPGSTAPSSSSSTTSTTT 29



 Score = 23.1 bits (48), Expect(2) = 8.1
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 288 GSGGVQESRRPVRRGGATHLRGNQDQGTA 374
           G+G V  S  P   GG+  L GNQDQ  A
Sbjct: 47  GTGTVANSSLP--GGGSGSLDGNQDQQPA 73

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>FER_PYRAB (Q9UXY2) Ferredoxin|
          Length = 66

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +1

Query: 259 CIDCATCRWMAPEVFKRVDGQSAVAAQP-----TSEETRTKALQALLSCPTSSI 405
           CI  A C  + P+VF+  D      AQP       EE    A +A+ SCP S+I
Sbjct: 11  CIGDAICASLCPDVFEMNDEGK---AQPKVEIIEDEELYNCAKEAMESCPVSAI 61

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>PERT_BORPE (P14283) Pertactin precursor (P.93) [Contains: Outer membrane|
           protein P.69]
          Length = 910

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 410 VWIEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHL 279
           +W+ + G E  + + L+LV + +G AAT     TL N  G + +
Sbjct: 510 LWVRNSGSEPASANTLLLVQTPLGSAAT----FTLANKDGKVDI 549

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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
           (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
 Frame = +2

Query: 44  RSALETENFTRESPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRS--TAGG 217
           R +LE E   + SP  +   P     P++L    A AP     S+P  P+   S   AGG
Sbjct: 419 RLSLEGERQPK-SPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGG 477

Query: 218 ARRTCPATSSSITGASTV---PPA 280
           A       SSS+  ++TV   PP+
Sbjct: 478 APTVFSFGSSSLKSSATVTGEPPS 501

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +2

Query: 41   RRSALETENFTRESPWRSTFAPPHP-SPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGG 217
            R S  ET    R    R    P  P +PPRR   ++   PP  +   P  PL +      
Sbjct: 918  RESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPK 977

Query: 218  ARRTCP--ATSSSITGASTVPPAG 283
              +  P   T   + G    PP G
Sbjct: 978  PPKPDPLKITKGKLGGPKETPPNG 1001

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>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = +2

Query: 137 CVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWLRRC 301
           CV  D PP      P  P P  + A       PAT+ +   A      GG+L  C
Sbjct: 391 CVEHDRPP------PATPTPLTTAANSTTAATPATAPAPCHAGLNDSCGGFLSGC 439

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>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated RNA-binding|
           fly homolog) (P19)
          Length = 399

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -2

Query: 198 RGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGDS 76
           RG G  G  +RDRGG S        GG G GG    R  D+
Sbjct: 332 RGSGGGGYHNRDRGGNS-----QGGGGGGGGGGGYSRFNDN 367


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,997,430
Number of Sequences: 219361
Number of extensions: 1585808
Number of successful extensions: 7305
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 6555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7255
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result