ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart28d03 |
|---|---|
| Clone Library Name | barley_pub |
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 264 bits (675), Expect = 1e-70 Identities = 129/163 (79%), Positives = 137/163 (84%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MK NIANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEF+GY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLTPGRVRLLLHRGT CF CIVS DLSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 598 NDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR+YVNTYR Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYR 163
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 263 bits (672), Expect = 3e-70 Identities = 127/163 (77%), Positives = 138/163 (84%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MK N+ANPTTGCQKK+EIDDDQKLR +DKR+SQEV GD LGEEF+GY+FKIMGGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLTPGRVRLLLHRGT CF CIVS DLSV+NLVIVKKG Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 598 +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR+YVNTYR Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYR 163
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 262 bits (670), Expect = 5e-70 Identities = 128/163 (78%), Positives = 136/163 (83%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MK N+ANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEF+GY+FKI GGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLTPGRVRLLLHRGT CF CIVS DLSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 598 NDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR YVNTYR Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYR 163
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 197 bits (500), Expect = 3e-50 Identities = 98/159 (61%), Positives = 119/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 197 bits (500), Expect = 3e-50 Identities = 98/159 (61%), Positives = 119/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 197 bits (500), Expect = 3e-50 Identities = 98/159 (61%), Positives = 119/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 193 bits (491), Expect = 3e-49 Identities = 96/159 (60%), Positives = 118/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++ +R Y+KR++ EV D LGEE++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIVKKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 192 bits (487), Expect = 8e-49 Identities = 94/159 (59%), Positives = 119/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVI++KG+ Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTD+ PR GPKRAS+I+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 190 bits (483), Expect = 2e-48 Identities = 94/159 (59%), Positives = 118/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E++D++KLR Y+KR++ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVIV+KG+ Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTD PR GPKRAS+I+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 190 bits (483), Expect = 2e-48 Identities = 95/159 (59%), Positives = 118/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CI +LSV+NLVI+KKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTD+ PR GPKRASKI+KLFNL K+DDVRQYV Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV 157
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 189 bits (479), Expect = 7e-48 Identities = 95/159 (59%), Positives = 116/159 (72%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P TGCQK +E+DD++KLR YDKRIS E+ D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT RVRLLL + SC+ CIV +LSV++LVI+KKG+ Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTD PR GPKRASKI+KLFNL K+DDVRQYV Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV 157
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 188 bits (478), Expect = 9e-48 Identities = 92/159 (57%), Positives = 118/159 (74%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MK+NI+ P TGCQK +E+DD++KLR Y+KR+S ++ + LG+E++GY+ +I GG DKQG Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV +LSV+NLVI+KKG+ Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRA +I+KLFNL K+DDVRQYV Sbjct: 119 QDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV 157
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 182 bits (462), Expect = 6e-46 Identities = 91/159 (57%), Positives = 113/159 (71%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E++GY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT RVRLLL +G SC+ CIV Q+LS + L++VKKG+ Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRAS I+KL+NL K+DDVRQ+V Sbjct: 119 KDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV 157
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 180 bits (456), Expect = 3e-45 Identities = 91/159 (57%), Positives = 112/159 (70%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E++GY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT RVRLLL +G SC+ CIV Q+LS + L++VKKG+ Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT R GPKRAS I+KL+NL K+DDVRQYV Sbjct: 119 KDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV 157
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 178 bits (451), Expect = 1e-44 Identities = 89/159 (55%), Positives = 114/159 (71%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLN++ P TGCQK E+ D+ KLR Y+KR+ Q V D+LG+E++GY +I GG DKQG Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT GRVRLLL +G SC+ CIV ++SV+ LV++KKG+ Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTDT PR GPKRASKI+KL+NL K+DDVR++V Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV 157
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 177 bits (450), Expect = 2e-44 Identities = 89/159 (55%), Positives = 113/159 (71%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV DLLG+E++GY+ ++ GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT RVRLL+ +G SC+ CIV +LSV+ LVIV+KG+ Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 ++PGLTD PR GPKRASKI+KLFNL K+DDVR+YV Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 157
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 176 bits (445), Expect = 6e-44 Identities = 89/159 (55%), Positives = 112/159 (70%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV D LG+E++GY+ +I GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVLT RVRLL+ +G SC+ CIV +LSV+ LVIV+KG+ Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 ++PGLTD PR GPKRASKI+KLFNL K+DDVR+YV Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 157
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 175 bits (444), Expect = 8e-44 Identities = 90/159 (56%), Positives = 109/159 (68%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPM QGVL P RVRLLL G C+ CIV QDL+V+ L IVK+G+ Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTD P+ GPKRASKI++ FNL K+DDVRQ+V Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV 157
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 175 bits (443), Expect = 1e-43 Identities = 89/159 (55%), Positives = 109/159 (68%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPM QGVL P RVRLLL G C+ CIV QDL+V+ L I+K+G+ Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+PGLTD P+ GPKRASKI++ FNL K+DDVRQ+V Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV 157
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 172 bits (437), Expect = 5e-43 Identities = 86/159 (54%), Positives = 113/159 (71%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK ++I+D+ KLR Y+KR+ QEV GD +G+EF+GYIF+I GG DKQG Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGV+ P RV+LLL +G SC+ CIV+QDL+V+ L +VK+G Sbjct: 61 FPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGD 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 +D+ GLTDT P+ GPKRA+ I+K F L K+DDVRQ+V Sbjct: 119 SDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV 157
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 172 bits (436), Expect = 7e-43 Identities = 88/162 (54%), Positives = 114/162 (70%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 M+LN A P TG QK E+D+++KLR ++KR+SQEV D LG+E++GY+ +I GG DKQG Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQG+LT GRVRLLL +G SC+ CIV ++S ++LVIVKKG Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTY 595 ++ GLTD+ PR GPKRASKI+KLFNL K DDV +YV T+ Sbjct: 119 GEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITH 160
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 171 bits (434), Expect = 1e-42 Identities = 87/159 (54%), Positives = 110/159 (69%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNIA P G QK ++I+D+ ++R Y+KR+ QEV D LG+EF+GY+ KI GG DKQG Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGV+ P RVRLLL + +SC+ CIVS DLSV+++VIVK+G Sbjct: 61 FPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGD 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 D+ GLT PR GPKRA+ I+KLF L K+DDVRQYV Sbjct: 119 ADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV 157
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 169 bits (428), Expect = 6e-42 Identities = 86/159 (54%), Positives = 109/159 (68%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNIA P G QK VE+DD+ ++R YDKRI QE+ G+ +G+EF+GY FKI GG DKQG Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVL P RV+LLL +G SC+ IV DL+V++LVIVKKG+ Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 +L G+TD P+ GPKRA+ I+K F L K+DDVR +V Sbjct: 119 QELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV 157
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 167 bits (424), Expect = 2e-41 Identities = 85/159 (53%), Positives = 108/159 (67%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK EIDD+ ++R +DKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVL P R++LLL + SC+ IV DL+V+ LVIVKKG+ Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 +L GLTDT P+ GPKRA+ I+K F L K+DDVR +V Sbjct: 119 QELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV 157
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 167 bits (423), Expect = 2e-41 Identities = 86/159 (54%), Positives = 109/159 (68%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK VEIDD+ ++R YDKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVL P RV+LL+ +GTSC+ IV DL+V+ LVIVKKG Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGD 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV Sbjct: 119 QEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV 157
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 166 bits (421), Expect = 4e-41 Identities = 82/159 (51%), Positives = 108/159 (67%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK +E+DD+ ++R YDKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVL P RV+LL+ +GTSC+ IV DL+V+ L+I KKG Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGD 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 ++ G+T+ P+ GPKRA+ I+K F L KDDDVR +V Sbjct: 119 QEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV 157
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 164 bits (414), Expect = 2e-40 Identities = 83/159 (52%), Positives = 108/159 (67%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 MKLNI+ P G QK +EIDD+ ++R YDKRI QEV G+ +G+EF+GY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60 Query: 290 FPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 FPMKQGVL P RV+LLL +G SC+ IV DL+V+ L+I KKG+ Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGE 118 Query: 470 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV Sbjct: 119 QEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV 157
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 157 bits (398), Expect = 2e-38 Identities = 78/116 (67%), Positives = 89/116 (76%) Frame = +2 Query: 245 EGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVS 424 +GY+FKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGT CF CIVS Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60 Query: 425 QDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNT 592 DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGP+ + + L+ K+DDVR+YVNT Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT 114
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 140 bits (353), Expect = 3e-33 Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 286 MKLNIA P G K+ EI D+ R L D R+ EV G + G EF+GYIF++ GG DK Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 287 GFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 466 GFPM GVL RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 467 KNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 + G+TDT PR GPKRASKI+KLFNL + +DVR+YV Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV 160
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 137 bits (346), Expect = 2e-32 Identities = 73/160 (45%), Positives = 95/160 (59%), Gaps = 1/160 (0%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 286 M LNIA P G K+ EI D+ R L D R+ EV G + G EF+GYIF++ GG DK Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 287 GFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 466 GFPM GVL RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 467 KNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYV 586 + G+TDT PR GPKRASKI+KLFNL + +DVR+YV Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV 160
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 88.2 bits (217), Expect = 2e-17 Identities = 54/147 (36%), Positives = 82/147 (55%) Frame = +2 Query: 158 EIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVRLL 337 EI+ ++R LYDK+I + G +LGEEFEG I +I GG D QGFPM G LT RVR L Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61 Query: 338 LHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRG 517 L +G + + IVS+++ V+NL+I++ G+ ++ GLT+ Sbjct: 62 LSKGDAGYRCRRKGVRRRKSVRGS--IVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119 Query: 518 PKRASKIKKLFNLGKDDDVRQYVNTYR 598 P++ K++K+F G D+ + V R Sbjct: 120 PRKEKKLRKMF--GVPDEEKNVVGYIR 144
>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e| Length = 125 Score = 56.6 bits (135), Expect = 5e-08 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%) Frame = +2 Query: 107 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 259 T KL I++P TG K++EI + L KRI ++ + +L G+EF E Sbjct: 3 TFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVKM 61 Query: 260 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 349 +I GG DK GFPM+ + P RVR+LL +G Sbjct: 62 EIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e| Length = 125 Score = 55.8 bits (133), Expect = 9e-08 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 9/90 (10%) Frame = +2 Query: 107 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFEGYI-F 259 T KL I+NP G K+VEI + + L +RI +E+ + ++ GEE Sbjct: 3 TFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAKL 61 Query: 260 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 349 KI GG DK GFPM+ V P RV++LL RG Sbjct: 62 KITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e| Length = 125 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%) Frame = +2 Query: 107 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 259 T KL I++P +G K+VEI + L KRI ++ + +L G+EF E Sbjct: 3 TFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVKL 61 Query: 260 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 349 +I GG DK GFPM+ + P RVR+LL +G Sbjct: 62 EIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 52.0 bits (123), Expect = 1e-06 Identities = 39/118 (33%), Positives = 56/118 (47%) Frame = +2 Query: 113 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 292 K+ +A+P +VE+ + L KRI + G+++G GY KI GG DK GF Sbjct: 5 KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61 Query: 293 PMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 466 PM+ + P RVRLLL G F +S+D+ +N VIV+ G Sbjct: 62 PMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT--ISEDIVQVNTVIVEYG 116
>RS6E_PYRHO (O58349) 30S ribosomal protein S6e| Length = 125 Score = 50.1 bits (118), Expect = 5e-06 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Frame = +2 Query: 107 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 259 T KL I++P +G K++EI L K+I ++ + L G++F E Sbjct: 3 TFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVKM 61 Query: 260 KIMGGCDKQGFPMKQGVLTPGRVRLLLHRG 349 +I GG DK GFPM+ + P RVR+LL +G Sbjct: 62 EIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_METTH (O26360) 30S ribosomal protein S6e| Length = 126 Score = 50.1 bits (118), Expect = 5e-06 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 8/125 (6%) Frame = +2 Query: 152 KVEIDDDQKLRNL-YDKRISQEVVGDLLGEEFEG-------YIFKIMGGCDKQGFPMKQG 307 KV I D +K + D S+ ++G +G+EF+G Y KI GG DK GFPMK+ Sbjct: 4 KVVISDKEKSVQMEVDPSESRGLIGLTIGDEFDGSIIGLSGYKLKITGGSDKNGFPMKKT 63 Query: 308 VLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDLPGL 487 V R+R L+ G +S D+ IN V+++KG+ L L Sbjct: 64 VPGARRIRSLVSGGVG---YKPRRDGERRRKTFRGNTISDDIVQINTVVIEKGEKPLEEL 120 Query: 488 TDTEK 502 ++ Sbjct: 121 LGADE 125
>RS6E_METJA (P54067) 30S ribosomal protein S6e| Length = 131 Score = 47.0 bits (110), Expect = 4e-05 Identities = 36/131 (27%), Positives = 58/131 (44%) Frame = +2 Query: 107 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 286 T K +A+P TG ++E D+ L K+I + G ++G EGY +I GG D Sbjct: 3 TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIG--LEGYKLQIRGGTDSS 56 Query: 287 GFPMKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 466 GFPM+ + +VR+LL ++ D+ IN+ +V+ G Sbjct: 57 GFPMRPDIHGSRKVRVLLSAPPG---FKPKRKGERRRKTVRGNTIAPDIVQINVKVVEYG 113 Query: 467 KNDLPGLTDTE 499 + +P L E Sbjct: 114 EKSIPELLGLE 124
>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e| Length = 127 Score = 45.1 bits (105), Expect = 2e-04 Identities = 36/119 (30%), Positives = 52/119 (43%) Frame = +2 Query: 122 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 301 IA+ TG K EID + + L +RI E+ G E GY KI GG GFPMK Sbjct: 6 IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62 Query: 302 QGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDL 478 + + G+ R+L+ + IV D+S +N++I + G L Sbjct: 63 KDLPIAGKKRILI----TYTHGRKGKNGIRKRVTLRGNIVGSDISQLNMIITQYGPQPL 117
>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e| Length = 124 Score = 43.1 bits (100), Expect = 6e-04 Identities = 35/127 (27%), Positives = 56/127 (44%) Frame = +2 Query: 122 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 301 IA+P TG K EI + ++ +L ++I E+ G + GY + GG GFPM+ Sbjct: 4 IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60 Query: 302 QGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGKNDLP 481 + T G+ ++L+ S I+ D+S INL IV+ G L Sbjct: 61 SDLQTQGKKQILV----SYKKGYRGKNGIRKRITVRGSIIGSDISQINLKIVQYGPTPLE 116 Query: 482 GLTDTEK 502 D ++ Sbjct: 117 EKKDDQQ 123
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e| Length = 129 Score = 41.6 bits (96), Expect = 0.002 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Frame = +2 Query: 122 IANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFP 295 I++P TG QK VE L K+I + G ++ + Y KI GG D+ GFP Sbjct: 7 ISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLPPD-YELKITGGTDRDGFP 62 Query: 296 MKQGVLTPGRVRLLLHRGTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGK 469 M+ + R RLLL G ++S+D+ IN V+VK GK Sbjct: 63 MRPDLPGTARRRLLLSGGVG---FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHGK 117
>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e| Length = 136 Score = 40.4 bits (93), Expect = 0.004 Identities = 27/79 (34%), Positives = 39/79 (49%) Frame = +2 Query: 113 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 292 K+ +++P G +++I D + L K I V G + G GY +I GGCD GF Sbjct: 5 KVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDGSGF 61 Query: 293 PMKQGVLTPGRVRLLLHRG 349 MK + P R R+L G Sbjct: 62 VMKPDLPGPRRQRILTATG 80
>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e| Length = 126 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/67 (34%), Positives = 38/67 (56%) Frame = +2 Query: 110 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 289 +K+ +++P +G ++E + Q L Y K+I + G +G +GY KI GG D G Sbjct: 7 VKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIG--LDGYELKITGGSDIAG 61 Query: 290 FPMKQGV 310 FPM++ V Sbjct: 62 FPMRKEV 68
>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e| Length = 136 Score = 38.9 bits (89), Expect = 0.011 Identities = 26/79 (32%), Positives = 38/79 (48%) Frame = +2 Query: 113 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 292 K+ +++P +++I D + L K I V G + G GY +I GGCD GF Sbjct: 5 KVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDGSGF 61 Query: 293 PMKQGVLTPGRVRLLLHRG 349 MK + P R R+L G Sbjct: 62 VMKPDLPGPRRQRILTATG 80
>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e| Length = 131 Score = 36.6 bits (83), Expect = 0.057 Identities = 24/81 (29%), Positives = 39/81 (48%) Frame = +2 Query: 107 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 286 T ++ +A+P +G + E+D Q + I V G +G +GY +I GG D Sbjct: 3 TFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVG--LDGYTVEITGGSDDA 59 Query: 287 GFPMKQGVLTPGRVRLLLHRG 349 G PM++ V + +LL G Sbjct: 60 GRPMREDVDGSDLMEVLLEGG 80
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e| Length = 245 Score = 34.3 bits (77), Expect = 0.28 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = +2 Query: 152 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVR 331 ++ + DD ++ L I G L+G G FKI GG D G PM GV GR + Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192 Query: 332 LLL 340 +LL Sbjct: 193 VLL 195
>APSA_EMENI (Q00083) Anucleate primary sterigmata protein A| Length = 1676 Score = 32.3 bits (72), Expect = 1.1 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Frame = -2 Query: 577 ADIIILAKVEELLDLGSPFGSPHPGLL---SVSQAWQIILALLDNHQVDNR*ILADNATT 407 AD ++ + L LG+ G+ P S +QA Q +L + Q+D +L D A+ Sbjct: 1163 ADGLVTQQNGVTLPLGAISGNAAPRRARSGSSNQADQGAQTILSSKQIDQ--LLIDRASV 1220 Query: 406 NRLPPA-------LTNTPAMSTKARCAPVKQKANA 323 L P ++N+P + KAR PV Q +NA Sbjct: 1221 RPLSPPDSDKLNEMSNSPFATPKARSRPVPQASNA 1255
>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)| Length = 128 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +2 Query: 122 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 301 +++P G ++++D Q + + EV G +G +GY ++ GG D G PM+ Sbjct: 7 VSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVG--LDGYSLELTGGSDTSGRPMR 63 Query: 302 QGV 310 V Sbjct: 64 PDV 66
>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e| Length = 213 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/98 (27%), Positives = 41/98 (41%) Frame = +2 Query: 167 DDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR 346 D KL N+ +I + ++ G + KI GG D GFPM+ V G R LL Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDV-PGGAKRKLLLS 177 Query: 347 GTSCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 460 G F +++QD+ IN +I++ Sbjct: 178 GPPGFYPEEDGMRRKKTVRGN--MITQDIVQINTIIIR 213
>POMA_VIBAL (O06873) Chemotaxis protein pomA| Length = 253 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Frame = +3 Query: 315 LLGAFAFCFTGAHLA-----FVDMAGVLVSAGGSLFVVAL 419 L+G FAF L FVD+ +L+ GGS+FVV + Sbjct: 9 LIGGFAFVIMAMVLGGSIGMFVDVTSILIVVGGSIFVVLM 48
>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e| Length = 214 Score = 30.4 bits (67), Expect = 4.1 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Frame = +2 Query: 194 DKRISQEVVGDLLGEEFEG-------YIFKIMGGCDKQGFPMKQGVLTPGRVRLLL 340 D+ + +VG +G+ FE KI GG D GFPM+ V+ + ++LL Sbjct: 122 DQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSGFPMRFDVIGAAKRKILL 177
>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c| Length = 163 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +2 Query: 149 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 241 +KV D +QK+R+ YD +S V+G+L+ +E Sbjct: 85 EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115
>PTGA_BACHD (Q9KCQ4) Glucose-specific phosphotransferase enzyme IIA component| (EC 2.7.1.-) (PTS system glucose-specific EIIA component) (EIIA-Glc) (EIII-Glc) Length = 173 Score = 29.3 bits (64), Expect = 9.1 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +2 Query: 179 LRNLYDKRISQEVVGDLLG-EEFEGYIFKIMGGCDKQGFPMKQ--GVLTPGRVRLLLHRG 349 + ++ D +Q+++GD + +G++ + G Q FP K G+ TPG LL+H G Sbjct: 35 IEDVPDPTFAQKMMGDGFAIDPRDGHVVAPVAGEIVQVFPTKHAVGIKTPGGAELLIHIG 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,637,388 Number of Sequences: 219361 Number of extensions: 1409659 Number of successful extensions: 4436 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4264 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4398 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
