ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart28c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL13A_PICMA (O65055) 60S ribosomal protein L13a 290 2e-78
2R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2 285 7e-77
3R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4 284 9e-77
4R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3 282 5e-76
5R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1 280 1e-75
6RL13A_LUPLU (O49885) 60S ribosomal protein L13a 273 2e-73
7RL13A_CYAPA (P93099) 60S ribosomal protein L13a 215 7e-56
8RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a 203 3e-52
9RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a 202 4e-52
10RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a 202 4e-52
11RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly b... 202 4e-52
12RL13A_RAT (P35427) 60S ribosomal protein L13a 202 6e-52
13RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A 201 8e-52
14RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation... 201 8e-52
15RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A 198 7e-51
16RL16A_SCHPO (O42848) 60S ribosomal protein L16-A 196 4e-50
17RL16B_SCHPO (O42991) 60S ribosomal protein L16-B 195 6e-50
18RL16_NEUCR (Q9P720) 60S ribosomal protein L16 195 8e-50
19RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation... 195 8e-50
20RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A 187 1e-47
21RL16C_SCHPO (O43004) 60S ribosomal protein L16-C 186 3e-47
22RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22) 185 6e-47
23RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23) 185 8e-47
24RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment) 184 1e-46
25RL13A_CAEEL (Q27389) 60S ribosomal protein L13a 177 2e-44
26RL13_ARCFU (O29137) 50S ribosomal protein L13P 88 1e-17
27RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50... 86 6e-17
28RL13_PYRAB (Q9V196) 50S ribosomal protein L13P 83 5e-16
29RL13_PYRHO (O59300) 50S ribosomal protein L13P 82 7e-16
30RL13_AERPE (Q9YB50) 50S ribosomal protein L13P 79 8e-15
31RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13) 73 4e-13
32RL13_SULSO (P95991) 50S ribosomal protein L13P 72 7e-13
33RL13_METJA (P54023) 50S ribosomal protein L13P 70 3e-12
34RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P 68 1e-11
35RL13_SULAC (P39473) 50S ribosomal protein L13P 67 2e-11
36RL13_THEMA (Q9X1G5) 50S ribosomal protein L13 48 1e-05
37RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precu... 46 7e-05
38RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13 44 2e-04
39RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13 44 2e-04
40RL13_STRCO (Q53874) 50S ribosomal protein L13 44 2e-04
41RL13_SYNY3 (P73294) 50S ribosomal protein L13 43 5e-04
42RL13_BACSU (P70974) 50S ribosomal protein L13 43 6e-04
43RL13_STAEQ (Q5HM31) 50S ribosomal protein L13 41 0.002
44RL13_MYCLE (P38014) 50S ribosomal protein L13 41 0.002
45RL13_STAES (Q8CRI9) 50S ribosomal protein L13 39 0.007
46RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13 39 0.007
47RL13_AQUAE (O67722) 50S ribosomal protein L13 39 0.009
48RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial pre... 39 0.009
49RL13_STAAW (Q7A089) 50S ribosomal protein L13 39 0.012
50RL13_STAAS (Q6G7A3) 50S ribosomal protein L13 39 0.012
51RL13_STAAR (Q6GEL7) 50S ribosomal protein L13 39 0.012
52RL13_STAAN (Q7A473) 50S ribosomal protein L13 39 0.012
53RL13_STAAM (Q99S51) 50S ribosomal protein L13 39 0.012
54RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13 39 0.012
55RL13_THET8 (P60488) 50S ribosomal protein L13 39 0.012
56RL13_CHLTR (O84127) 50S ribosomal protein L13 38 0.015
57RL13_STACA (Q00990) 50S ribosomal protein L13 38 0.015
58RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13 38 0.020
59RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13) 37 0.034
60RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13 37 0.034
61RL13_STAHJ (Q4L881) 50S ribosomal protein L13 37 0.034
62RL13_TREPA (O83988) 50S ribosomal protein L13 37 0.045
63RL13_HELPY (P56038) 50S ribosomal protein L13 37 0.045
64RL13_SHIFL (P0AA15) 50S ribosomal protein L13 36 0.076
65RL13_SALTY (P0AA13) 50S ribosomal protein L13 36 0.076
66RL13_SALTI (P0AA14) 50S ribosomal protein L13 36 0.076
67RL13_ECOLI (P0AA10) 50S ribosomal protein L13 36 0.076
68RL13_ECOL6 (P0AA11) 50S ribosomal protein L13 36 0.076
69RL13_ECO57 (P0AA12) 50S ribosomal protein L13 36 0.076
70RL13_HAEIN (P44387) 50S ribosomal protein L13 35 0.100
71IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Ir... 33 0.38
72IER5_MOUSE (O89113) Immediate early response gene 5 protein 32 0.85
73RL13_BUCBP (Q89AE6) 50S ribosomal protein L13 32 1.4
74ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII... 30 3.2
75NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 pr... 30 3.2
76IF2_METCA (Q609C0) Translation initiation factor IF-2 30 3.2
77Y2023_MYCBO (P64918) Hypothetical protein Mb2023 30 4.2
78Y2000_MYCTU (P64917) Hypothetical protein Rv2000/MT2056 30 4.2
79APXL_HUMAN (Q13796) Apical-like protein (APXL protein) 30 4.2
80RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13 30 4.2
81CAPU_DROME (Q24120) Protein cappuccino 30 4.2
82PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1... 30 5.5
83CAPG_HUMAN (P40121) Macrophage capping protein (Actin-regulatory... 29 7.2
84CAPG_MOUSE (P24452) Macrophage capping protein (Myc basic motif ... 29 7.2
85VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymera... 29 7.2
86P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor ... 29 7.2
87MADCA_MOUSE (Q61826) Mucosal addressin cell adhesion molecule 1 ... 29 7.2
88BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protei... 29 9.3
89PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A act... 29 9.3
90MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2) 29 9.3
91ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote... 29 9.3
92PPARB_MOUSE (P35396) Peroxisome proliferator-activated receptor ... 29 9.3

>RL13A_PICMA (O65055) 60S ribosomal protein L13a|
          Length = 206

 Score =  290 bits (742), Expect = 2e-78
 Identities = 138/154 (89%), Positives = 149/154 (96%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMSGGLVRQKMKYL
Sbjct: 1   MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHKT RG AALA L+A+EGVPPPYDR 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRK 120

Query: 428 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           KRMVIPDALKVLRLQPGH+YCLLG+LSKEVGW++
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHH 154



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>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2|
          Length = 206

 Score =  285 bits (728), Expect = 7e-77
 Identities = 133/154 (86%), Positives = 145/154 (94%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EGVPPPYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 428 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           KRMVIPDALKVLRLQ GH+YCLLG+LS EVGWN+
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNH 154



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>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4|
          Length = 206

 Score =  284 bits (727), Expect = 9e-77
 Identities = 133/154 (86%), Positives = 145/154 (94%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK YEGVP PYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 428 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           KRMVIPDALKVLRLQ GH+YCLLG+LS EVGWN+
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNH 154



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>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3|
          Length = 206

 Score =  282 bits (721), Expect = 5e-76
 Identities = 132/154 (85%), Positives = 143/154 (92%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+CAKRVVVD RHHMLGRLAS  AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EG+PPPYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 428 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           KRMVIPDALKVLRLQ GH+YCLLG+LS EVGWN+
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNH 154



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>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1|
          Length = 206

 Score =  280 bits (717), Expect = 1e-75
 Identities = 130/154 (84%), Positives = 144/154 (93%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG  ALARLK +EGVP PYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 428 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           KRMV+PDALKVLRLQ GH+YCLLG+LS EVGWN+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNH 154



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>RL13A_LUPLU (O49885) 60S ribosomal protein L13a|
          Length = 205

 Score =  273 bits (699), Expect = 2e-73
 Identities = 131/154 (85%), Positives = 143/154 (92%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKT RGE ALARLK YEG+PPP+D+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 119

Query: 428 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           KR+V+PDALKVLRLQ GH+YCLLGQLS EVGWNY
Sbjct: 120 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNY 153



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>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score =  215 bits (547), Expect = 7e-56
 Identities = 102/146 (69%), Positives = 122/146 (83%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +SG L R K+K+  FL+KRMNT
Sbjct: 4   KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 454
            P  GP HFR+PA+ILWRTIRGMIPHKT RG AAL RLKA+EGVPPPYD+ KRMVIP AL
Sbjct: 64  NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123

Query: 455 KVLRLQPGHRYCLLGQLSKEVGWNYA 532
           +VLRL+PG ++C+LG+L+ EVGW ++
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGWRHS 149



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>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a|
          Length = 202

 Score =  203 bits (516), Expect = 3e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148



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>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a|
          Length = 202

 Score =  202 bits (515), Expect = 4e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148



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>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a|
          Length = 202

 Score =  202 bits (515), Expect = 4e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148



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>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)|
          Length = 202

 Score =  202 bits (515), Expect = 4e-52
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148



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>RL13A_RAT (P35427) 60S ribosomal protein L13a|
          Length = 202

 Score =  202 bits (513), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK  +G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148



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>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A|
          Length = 204

 Score =  201 bits (512), Expect = 8e-52
 Identities = 89/150 (59%), Positives = 118/150 (78%)
 Frame = +2

Query: 80  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 259
           +G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +SG   R K+K++ FLR
Sbjct: 2   TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 61

Query: 260 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 439
           KR N  P+ GP HFRAP+KILW+T+RGMIPHKT RG++AL RL+AY+G PPPYD  +R+V
Sbjct: 62  KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVV 121

Query: 440 IPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           +P AL+V  L+PG +YC +G+LS EVGW Y
Sbjct: 122 VPAALRVFCLKPGRKYCHVGRLSHEVGWKY 151



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>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)|
           (Tum-P198 antigen)
          Length = 202

 Score =  201 bits (512), Expect = 8e-52
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK  +G+PPPYD+ KRMV+P ALKV
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           +RL+P  ++  LG+L+ EVGW Y
Sbjct: 126 VRLKPTRKFAYLGRLAHEVGWKY 148



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>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A|
          Length = 204

 Score =  198 bits (504), Expect = 7e-51
 Identities = 87/150 (58%), Positives = 117/150 (78%)
 Frame = +2

Query: 80  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 259
           +G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +SG   R K+K++ FLR
Sbjct: 2   TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLR 61

Query: 260 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 439
           KR N  P+ GP HFRAP+KILW+T+RGMIPHKT RG+ AL RL++Y+G PPPYD  +R+V
Sbjct: 62  KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVV 121

Query: 440 IPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           +P AL+V  L+PG +YC +G+LS EVGW Y
Sbjct: 122 VPAALRVFCLKPGRKYCHVGRLSHEVGWKY 151



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>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A|
          Length = 197

 Score =  196 bits (497), Expect = 4e-50
 Identities = 89/146 (60%), Positives = 117/146 (80%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 454
            PS G  HFRAP++I  + +RGM+PHKTARG+AAL  L+A EG+PPP+D+ KR+V+P AL
Sbjct: 66  NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125

Query: 455 KVLRLQPGHRYCLLGQLSKEVGWNYA 532
           +VLRL+PG +YC +G+LS EVGW Y+
Sbjct: 126 RVLRLKPGRKYCTVGRLSSEVGWKYS 151



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>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B|
          Length = 197

 Score =  195 bits (496), Expect = 6e-50
 Identities = 89/145 (61%), Positives = 116/145 (80%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 454
            PS G  HFRAP++I  + +RGM+PHKTARG+AAL  L+A EG+PPP+D+ KR+V+P AL
Sbjct: 66  NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125

Query: 455 KVLRLQPGHRYCLLGQLSKEVGWNY 529
           +VLRL+PG +YC +G+LS EVGW Y
Sbjct: 126 RVLRLKPGRKYCTVGRLSSEVGWKY 150



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>RL16_NEUCR (Q9P720) 60S ribosomal protein L16|
          Length = 202

 Score =  195 bits (495), Expect = 8e-50
 Identities = 90/144 (62%), Positives = 115/144 (79%), Gaps = 1/144 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +SG   R K+KY  +LRK     P
Sbjct: 8   VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNP 67

Query: 281 SHG-PIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 457
           + G P HFRAP++I ++ +RGMIPHKTARG AAL RLK +EGVPPPYD+ K+MV+P AL+
Sbjct: 68  TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALR 127

Query: 458 VLRLQPGHRYCLLGQLSKEVGWNY 529
           VLRLQPG ++C +G+LS EVGW Y
Sbjct: 128 VLRLQPGRKFCTVGRLSSEVGWKY 151



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>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198|
           homolog) (Fragment)
          Length = 189

 Score =  195 bits (495), Expect = 8e-50
 Identities = 89/135 (65%), Positives = 111/135 (82%)
 Frame = +2

Query: 125 MLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 304
           +LGRLA+IVA E+L G +VVVVRCE I +SG   R K+KYL FLRKRMNT PS GP HFR
Sbjct: 1   LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR 60

Query: 305 APAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHR 484
           AP++I WRT+RGM+PHKT RG+AAL RLK ++GVPPPYD+ KRMV+P ALK++RL+P  +
Sbjct: 61  APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALKIVRLKPTRK 120

Query: 485 YCLLGQLSKEVGWNY 529
           + LLG+L+ EVGW Y
Sbjct: 121 FALLGRLAHEVGWKY 135



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>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A|
          Length = 205

 Score =  187 bits (476), Expect = 1e-47
 Identities = 83/150 (55%), Positives = 117/150 (78%)
 Frame = +2

Query: 80  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 259
           +G+  + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +SG   R K+K+L +LR
Sbjct: 2   TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLR 61

Query: 260 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 439
           KR N  P+ GP HFRAP++I ++ +RGMIPHKT RG+AALARL+ ++G+P PYD+ +R+V
Sbjct: 62  KRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVV 121

Query: 440 IPDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           +P A++VL L+   +YC +G+LS EVGW+Y
Sbjct: 122 VPIAMRVLTLRSDRKYCQVGRLSHEVGWHY 151



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>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C|
          Length = 197

 Score =  186 bits (473), Expect = 3e-47
 Identities = 84/145 (57%), Positives = 111/145 (76%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 454
            PS G  HFRAP++I  + +RGM+PHKT RG  AL  L+A EG+PPP+D+ KR+V+P AL
Sbjct: 66  NPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAAL 125

Query: 455 KVLRLQPGHRYCLLGQLSKEVGWNY 529
           +VLRL+P  +YC +G+LS EVGW Y
Sbjct: 126 RVLRLKPSRKYCTIGRLSSEVGWKY 150



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>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)|
          Length = 198

 Score =  185 bits (470), Expect = 6e-47
 Identities = 84/143 (58%), Positives = 112/143 (78%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +SG   R K+KY  FLRK      
Sbjct: 6   VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           + GP HFRAP++I ++ +RGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P AL+V
Sbjct: 66  TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRV 125

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           LRL+PG +Y  LG+LS  VGW Y
Sbjct: 126 LRLKPGRKYTTLGKLSTSVGWKY 148



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>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)|
          Length = 197

 Score =  185 bits (469), Expect = 8e-47
 Identities = 85/143 (59%), Positives = 112/143 (78%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +SG   R K+KY  FLRK      
Sbjct: 5   VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 64

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           + GP HFRAP++IL++ IRGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P AL+V
Sbjct: 65  TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRV 124

Query: 461 LRLQPGHRYCLLGQLSKEVGWNY 529
           LRL+PG +Y  LG+LS  VGW Y
Sbjct: 125 LRLKPGRKYTTLGKLSTSVGWKY 147



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>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)|
          Length = 137

 Score =  184 bits (468), Expect = 1e-46
 Identities = 86/135 (63%), Positives = 111/135 (82%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 3   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALKV
Sbjct: 63  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 122

Query: 461 LRLQPGHRYCLLGQL 505
           +RL+   ++  LG+L
Sbjct: 123 VRLKLTGKFXYLGRL 137



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>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a|
          Length = 202

 Score =  177 bits (448), Expect = 2e-44
 Identities = 81/149 (54%), Positives = 109/149 (73%)
 Frame = +2

Query: 83  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 262
           G+  + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +SG   R K+KY+ FLRK
Sbjct: 2   GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61

Query: 263 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 442
           R N  P+ G  H+RAP KI WRT+RGM+PHKT RG  AL  L+AYEGVP  Y +TK +  
Sbjct: 62  RCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHA 121

Query: 443 PDALKVLRLQPGHRYCLLGQLSKEVGWNY 529
           P A +  RLQP  ++C++G+LS EVGW +
Sbjct: 122 PSASR-FRLQPRRKFCVVGRLSHEVGWQF 149



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>RL13_ARCFU (O29137) 50S ribosomal protein L13P|
          Length = 156

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 52/140 (37%), Positives = 81/140 (57%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           V+DA  H+LGRL+S +AK LLNG+R+VVV  E+  ++G    + M + R+  K       
Sbjct: 18  VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKE 74

Query: 284 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVL 463
            GP   R P +I  RT+RGM+P K++RG  A  RL+ + GVP      +   I DAL + 
Sbjct: 75  KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEELQGREFEKIEDAL-LE 133

Query: 464 RLQPGHRYCLLGQLSKEVGW 523
           ++    +Y  L ++S+ +G+
Sbjct: 134 KVSKTDKYVTLAEVSRYLGF 153



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>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal|
           protein L13P; 30S ribosomal protein S9P]
          Length = 282

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           ++++   H+LGRLAS+V+K+LL G+ V+V+  E+I ++G       KY + + +   + P
Sbjct: 4   MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNP 63

Query: 281 SH-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 457
              GP + R P  I  RT+RGM+P+K ++G  A   LKAY G+P  +   + + IPDA K
Sbjct: 64  RRMGPKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIPDA-K 122

Query: 458 VLRLQPGHRYCLLGQLSKEVG 520
              ++ G     LG++S+ +G
Sbjct: 123 AGSIKKGME---LGEISELLG 140



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>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P|
          Length = 142

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 53/142 (37%), Positives = 79/142 (55%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 284 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVL 463
            GP + +   +I+ RTIRGM+P KT RG  A  RLK Y G+P  +   +   I +A  V 
Sbjct: 63  RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEFKDKQLETIVEA-HVS 121

Query: 464 RLQPGHRYCLLGQLSKEVGWNY 529
           RL    +Y  +G+++K +G  +
Sbjct: 122 RLS-RPKYVTVGEVAKFLGGKF 142



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>RL13_PYRHO (O59300) 50S ribosomal protein L13P|
          Length = 142

 Score = 82.4 bits (202), Expect = 7e-16
 Identities = 53/142 (37%), Positives = 79/142 (55%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 284 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKVL 463
            GP + +   +I+ RTIRGM+P KT RG  A  RLK Y G+P  +   +   I +A  V 
Sbjct: 63  RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEA-HVS 121

Query: 464 RLQPGHRYCLLGQLSKEVGWNY 529
           RL    +Y  +G+++K +G  +
Sbjct: 122 RLS-RPKYVTVGEVAKFLGGKF 142



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>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P|
          Length = 155

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
 Frame = +2

Query: 92  AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMN 271
           A+ +VVD    ++GRLAS+VAK LL G RV VV  E+I +SG   R  ++  R     + 
Sbjct: 8   AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD-PRMVVESYRTTVLGVK 66

Query: 272 TKPSH--GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           +  SH   P   R P ++    +RGM+P   ARG  ALARL+ Y GVP      + +  P
Sbjct: 67  SHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFP 126

Query: 446 DALKVLRLQPGHRYCLLGQLSKEVGW 523
           +A    RL     Y  LG +++++GW
Sbjct: 127 EA-DASRL--SSHYIELGAVARQLGW 149



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>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)|
          Length = 145

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 50/142 (35%), Positives = 78/142 (54%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           V+VDAR  ++GR+AS VA++ L+G+ V VV  E   ++G   +   KY     KR++   
Sbjct: 10  VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKY----EKRVDIGN 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
            +G  + + P  I  RTIRGM+PHK  RG  A   ++ Y G   PYD    ++  D   +
Sbjct: 66  DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYDEDGEVL--DGTSL 121

Query: 461 LRLQPGHRYCLLGQLSKEVGWN 526
            RL    ++  LG++S+ +G N
Sbjct: 122 DRLS-NIKFVTLGEISETLGAN 142



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>RL13_SULSO (P95991) 50S ribosomal protein L13P|
          Length = 149

 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           V+++A   +LGR+AS V + L  G++V++V  E+  +SG   R    Y   L  +    P
Sbjct: 10  VIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNP 69

Query: 281 SHGPIHF-RAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 457
               I   R+P  I+ RTIRGM+P K+++G   L  +K Y GVP  ++  + +  PD+  
Sbjct: 70  YRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS-D 127

Query: 458 VLRLQPGHRYCLLGQLSKEVGWN 526
           V RL+   +Y  +  +SKE+GW+
Sbjct: 128 VSRLK--GKYVTVEVVSKELGWS 148



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>RL13_METJA (P54023) 50S ribosomal protein L13P|
          Length = 137

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           V+DA   +LGRLAS VAK +L G+ +V+V  E + ++G        Y     K+    P 
Sbjct: 3   VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVITGNKDWIIKTYQEEREKKNVANPR 62

Query: 284 H-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
             GP   R P  IL RTIR M+P+K  +G  A  R+K Y G P      K + + +  K+
Sbjct: 63  RFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP------KNLTVDE--KI 114

Query: 461 LRLQPGHRYCLLGQLSKEVG 520
                  +Y  L +LSK +G
Sbjct: 115 SHKLNTTKYITLAELSKHLG 134



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>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P|
          Length = 145

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/142 (35%), Positives = 71/142 (50%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VVVDAR  ++GR+AS VA+  L G RV VV  E+  ++G     +       R R N   
Sbjct: 10  VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQAVITG----TEDDVFSTYRTRANLGS 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALKV 460
             GP + + P  I  R IRGM+P+K   G  AL  ++ Y G P   D      + D   +
Sbjct: 66  DRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDEDGD----VLDGTSL 121

Query: 461 LRLQPGHRYCLLGQLSKEVGWN 526
            RL    R+  L ++S+E+G N
Sbjct: 122 DRLST-IRFVTLSEVSEELGAN 142



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>RL13_SULAC (P39473) 50S ribosomal protein L13P|
          Length = 148

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKY-LRFLRKRMNTK 277
           V+VDA + +LGR+++ +AK L +G++V VV  E+  +SG   R    Y L F  K M   
Sbjct: 8   VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67

Query: 278 PSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 457
              G    R P  I+ RT+RGM+P K   G+     LKAY G+P   +  K M+  D   
Sbjct: 68  YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELE-GKSMIRFDDAD 125

Query: 458 VLRLQPGHRYCLLGQLSKEVG 520
           V RL+   +Y  + +LS+ +G
Sbjct: 126 VSRLK--GKYITVAELSRLLG 144



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>RL13_THEMA (Q9X1G5) 50S ribosomal protein L13|
          Length = 149

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M+    V  K  VVDA   +LGRLA+ +AK L+             G  V+VV  +++ +
Sbjct: 12  MIKPEEVERKWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVL 71

Query: 212 SGGLVRQKMKY--------LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARG 367
           +G  + QK+ Y        L+ L  R   +        + P +++W  ++ M+P K  +G
Sbjct: 72  TGKKLDQKVYYWHSGYPGGLKSLTARQMLE--------KHPERLIWLAVKRMLP-KNRKG 122

Query: 368 EAALARLKAYEGVPPPYDRTK 430
              L RLK Y     P+   K
Sbjct: 123 RKMLKRLKVYASPEHPHQAQK 143



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>RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precursor (CL13)|
          Length = 250

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVA-----KELLN-------GQRVVVVRCEEICMSGGLVRQKM 238
           K  VVDA   +LGR+AS +A     K L +       G  V+VV  +++ +SG    QK+
Sbjct: 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172

Query: 239 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                 R     + +   +  R P +I+   +RGM+P K   G      LK Y+G   P+
Sbjct: 173 YRRHSGRPGGLKEETFDQLQKRIPERIIEHAVRGMLP-KGRLGRYLFNHLKVYKGAEHPH 231

Query: 419 DRTKRMVIPDALKVLRLQ 472
              + + +P   K +R++
Sbjct: 232 QAQQPIDLPLRDKRIRVE 249



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>RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13|
          Length = 174

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAK------------ELLNGQRVVVVRCEEICMSGGLVRQKMKY 244
           VVVDA    LGRLA+++A              ++ G  VVV+   ++ ++G  +  K+ Y
Sbjct: 42  VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKV-Y 100

Query: 245 LRF--LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
            R+   +  + T+ +   +  + P +++   + GM+P K  +G A   RLK Y G   P+
Sbjct: 101 TRYTGYQGGLKTETAREALS-KHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAGETHPH 158

Query: 419 DRTKRMVI 442
              K  V+
Sbjct: 159 SAQKPQVL 166



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>RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13|
          Length = 145

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGKTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIVINASKIHF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G   R KM Y            S G +    P ++L  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKERDKMYYRHSNHPGGIKSISAGELKANNPERLLENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_STRCO (Q53874) 50S ribosomal protein L13|
          Length = 147

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLAS------------IVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           V+DA+  +LGRLA+            I A  +  G  V+++  +++ +SG    QKM Y 
Sbjct: 17  VIDAQDVVLGRLATTAASILRGKHKPIYAPHVDTGDFVIIINADKVHLSGNKRTQKMAYR 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                       +  +  + P K + + I+GM+P K + G   L++LK Y+G   P+
Sbjct: 77  HSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMLP-KNSLGRQMLSKLKVYKGDQHPH 132



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>RL13_SYNY3 (P73294) 50S ribosomal protein L13|
          Length = 151

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 238
           K  V+DA    LGRLA+ VA  L              G  V+++  E+I ++G    QK+
Sbjct: 15  KWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKREQKL 74

Query: 239 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                 R     + +   +  R P +I+   +RGM+P K + G     +LK Y G   P+
Sbjct: 75  YRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLP-KNSLGRKLFTKLKVYAGPSHPH 133



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>RL13_BACSU (P70974) 50S ribosomal protein L13|
          Length = 145

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K +VVDA    LGRL+S VA  L              G  V+++  E+I +
Sbjct: 6   MANASTIERKCLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIEL 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRA--PAKILWRTIRGMIPHKTARGEAALAR 385
           +G  +  K+ Y R  +     K S   +  R   P K+L   I+GM+P K + G     +
Sbjct: 66  TGKKLTDKI-YYRHTQHPGGLK-SRTALEMRTNYPEKMLELAIKGMLP-KGSLGRQMFKK 122

Query: 386 LKAYEGVPPPYDRTK 430
           L  Y G   P++  K
Sbjct: 123 LNVYRGSEHPHEAQK 137



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>RL13_STAEQ (Q5HM31) 50S ribosomal protein L13|
          Length = 145

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G   + KM Y            S G +    P ++L  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKEQDKMYYRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_MYCLE (P38014) 50S ribosomal protein L13|
          Length = 147

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           V+DA   +LGRLA++ A  L              G  V+V+  +++ +SG  V+ KM Y 
Sbjct: 17  VIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYR 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
                    K + G +  + P +++ + I GM+P K         +L+ Y G  P +  +
Sbjct: 77  HSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLP-KNKLSRQIQRKLRVYAG--PDHPHS 133

Query: 428 KRMVIPDALK 457
            +  +P  +K
Sbjct: 134 AQQPVPFEIK 143



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>RL13_STAES (Q8CRI9) 50S ribosomal protein L13|
          Length = 145

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G   + KM +            S G +    P ++L  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKEQDKMYHRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13|
          Length = 143

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM 238
           K  ++DA    LGRLAS  AK L+                +V++  ++I ++G     K 
Sbjct: 15  KWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKF 74

Query: 239 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
            Y    +    T  +   +  R P +IL + ++G++P K   G      LK Y G   P+
Sbjct: 75  YYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHPH 133

Query: 419 D 421
           +
Sbjct: 134 E 134



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>RL13_AQUAE (O67722) 50S ribosomal protein L13|
          Length = 144

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLAS +AK L              G  V+V+  E+I ++G  + QK  Y 
Sbjct: 17  VVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYYW 76

Query: 248 ----------RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 397
                     R L+  +  KP           +++   ++ M+P K   G   L +LK Y
Sbjct: 77  HSRYPGGLKERTLKWMLENKPE----------EVIRLAVKRMLP-KNRLGHRMLKKLKVY 125

Query: 398 EGVPPPYDRTK 430
            G   P+   K
Sbjct: 126 RGPEHPHQAQK 136



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>RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial precursor (YmL23)|
          Length = 163

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
 Frame = +2

Query: 128 LGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLRFLRK-RM 268
           LGRLAS +A  L+             G  VVV  C++I ++G    QK  +    R  ++
Sbjct: 28  LGRLASAIAITLIGRHKPVYHPSQDCGDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQL 87

Query: 269 NTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT------K 430
             +  +  +  +   +IL + + GM+P    R +  L RLK ++G   PY +       +
Sbjct: 88  KLQTMNKVVADKGFGEILKKAVSGMLPKNKLR-KQRLDRLKVFDGSENPYKQNITAFAHE 146

Query: 431 RMVIPDALK 457
           +  IP+ LK
Sbjct: 147 QSSIPEPLK 155



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>RL13_STAAW (Q7A089) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_STAAS (Q6G7A3) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_STAAR (Q6GEL7) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_STAAN (Q7A473) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_STAAM (Q99S51) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_THET8 (P60488) 50S ribosomal protein L13|
          Length = 140

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKY 244
           V++DA    LGRLA+ +A  L              G  VVVV  ++I ++G  + QK+ Y
Sbjct: 14  VLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKI-Y 72

Query: 245 LRF-----------LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
            R+           L K + T P           ++L   ++GM+P K   G     RLK
Sbjct: 73  TRYSGYPGGLKKIPLEKMLATHPE----------RVLEHAVKGMLP-KGPLGRRLFKRLK 121

Query: 392 AYEGVPPPYDRTKRMVIPDALKV 460
            Y G   P+   +    P+ L+V
Sbjct: 122 VYAGPDHPHQAQR----PEKLEV 140



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>RL13_CHLTR (O84127) 50S ribosomal protein L13|
          Length = 150

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 244
           VV+A    LGRL+S VAK L              G  V+V+  E++ ++G    QK+  Y
Sbjct: 24  VVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83

Query: 245 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                  M   P    I  R PA ++   ++GM+P KT  G   +  L+  +G
Sbjct: 84  YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVLKG 134



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>RL13_STACA (Q00990) 50S ribosomal protein L13|
          Length = 145

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L             +G  V+++   +I M
Sbjct: 6   MANESNIERKWYVIDAAGQTLGRLSSEVASILRGKHKATYTPHVDSGDYVIIINAGQIEM 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +  + P ++L  +I+GM+P  +  GE    +L 
Sbjct: 66  TGKKASDKVYYRHSNYPGGIKSITAGELREKNPERLLEISIKGMLP-SSRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13|
          Length = 150

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 244
           V++A    LGRL+S VAK L              G  V+V+  E++ ++G    QK+  Y
Sbjct: 24  VINAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83

Query: 245 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                  M   P    I  R PA ++   ++GM+P KT  G   +  L+  +G
Sbjct: 84  YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVVKG 134



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>RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)|
          Length = 154

 Score = 37.0 bits (84), Expect = 0.034
 Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
 Frame = +2

Query: 86  VCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVR 229
           V  K V++DA   ++GRLA++VA  L              G  V+++   ++ ++G    
Sbjct: 11  VTKKWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRD 70

Query: 230 QKMKYLRF-LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGV 406
            K+ Y        +  + +   +  R P +++ + I  MIP +   G   +  L+ Y G 
Sbjct: 71  NKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIP-RGPLGRVQMGNLRVYPGA 129

Query: 407 PPPYD 421
             P++
Sbjct: 130 EHPHE 134



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>RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13|
          Length = 149

 Score = 37.0 bits (84), Expect = 0.034
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICM 211
           +V  S       VVDA    LGRL+S VAK L              G  V+V+  E++ +
Sbjct: 11  IVKSSETTKSWYVVDAAGKTLGRLSSEVAKILRGKHKVTYTPHVAMGDGVIVINAEKVRL 70

Query: 212 SGGLVRQKM-KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARL 388
           +G    QK+ +Y       M   P    +  R P  I+   I+GM+P +T  G+  L  L
Sbjct: 71  TGAKKGQKIYRYYTGYISGMREIPFEN-MMARKPNYIIEHAIKGMMP-RTRLGKKQLKSL 128

Query: 389 KAYEG 403
           +  +G
Sbjct: 129 RIVKG 133



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>RL13_STAHJ (Q4L881) 50S ribosomal protein L13|
          Length = 145

 Score = 37.0 bits (84), Expect = 0.034
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I +
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAAKIEL 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P ++L  +I+GM+P  +  GE    +L 
Sbjct: 66  TGKKESDKIYYRHSNHPGGIKSVTAGELKRNNPERLLETSIKGMLP-SSRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133



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>RL13_TREPA (O83988) 50S ribosomal protein L13|
          Length = 142

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 247
           ++DA    LGR+A+ VA  L              G  VVV+  E++ +SG   + KM Y 
Sbjct: 17  LIDAAGRPLGRVAARVACLLRGKHKASYTPNQEMGDYVVVINAEKVFLSGTKPKDKMYYR 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 421
                      S   +  R P + L   ++GM+P K   G   +  +K Y G   P++
Sbjct: 77  HSGYPGGLKSVSFSALVKRRPVEPLRHAVKGMLP-KGPLGRKLIKNVKIYAGSVHPHE 133



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>RL13_HELPY (P56038) 50S ribosomal protein L13|
          Length = 141

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQR------------VVVVRCEEICMSGGLVRQKMKY 244
           VV+DA+  + GRL + +A  L    R            VVV+   ++  SG  +  K  +
Sbjct: 15  VVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYF 74

Query: 245 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                       +   +  +AP K+    +RGM+P KT  G+A + +LK Y     P+
Sbjct: 75  THSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131



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>RL13_SHIFL (P0AA15) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>RL13_SALTY (P0AA13) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>RL13_SALTI (P0AA14) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>RL13_ECOLI (P0AA10) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>RL13_ECOL6 (P0AA11) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>RL13_ECO57 (P0AA12) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>RL13_HAEIN (P44387) 50S ribosomal protein L13|
          Length = 142

 Score = 35.4 bits (80), Expect = 0.100
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYW 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P  ++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127



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>IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Iroquois|
           homeobox protein 4)
          Length = 485

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = +1

Query: 283 PRPHPLPRPGQDPLAHHPRYDSAQDRE----GRGRACQAQGVRGCAAAV 417
           P PHPLP  G  P A  P   +A++ E     R R C       C AA+
Sbjct: 279 PHPHPLPGGGPPPRAAEPPAAAAEEEEEEAAERARGCLKPAAEECEAAL 327



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>IER5_MOUSE (O89113) Immediate early response gene 5 protein|
          Length = 308

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 23/78 (29%), Positives = 31/78 (39%)
 Frame = +1

Query: 283 PRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQAHGHSRRAQGS 462
           P P P P+P +  + H P         G G +     V G   A+R  +        + S
Sbjct: 98  PEPQPQPQPQRPSVCHTP---------GAGSSEPVAAVAGSGEALRGGE--------EDS 140

Query: 463 EAAAWAQVLPPGPALQGG 516
            AAAW +V  P  A  GG
Sbjct: 141 AAAAWGRVERPRAASSGG 158



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>RL13_BUCBP (Q89AE6) 50S ribosomal protein L13|
          Length = 144

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
 Frame = +2

Query: 107 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 250
           +DA   +LGRLA+ +A  L              G  ++V+  + I ++G     K  Y  
Sbjct: 20  IDATGKILGRLATNIASRLRGKHKVEYTPHVDIGDYLIVINAKNIKVTGKKCTDKFYYHH 79

Query: 251 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 397
                   K +   +  R P +I+   +RGM+P K   G +   +LK Y
Sbjct: 80  TGYVGGLKKIAFKDMLHRYPERIIEIAVRGMLP-KGPLGRSMFKKLKVY 127



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>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3|
           (Elongin A3) (EloA3) (Transcription elongation factor B
           polypeptide 3C)
          Length = 546

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +1

Query: 283 PRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQG----VRGCAAAVRQDQAHGHSRR 450
           P   P  R    P+   P      ++ GRG A  AQG     +GC    + +    HS+ 
Sbjct: 167 PHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKG 226

Query: 451 AQGSEAAAWAQVLPPGPALQGGRME 525
            + S  A+ AQ  PP    Q  R++
Sbjct: 227 HKSSRGAS-AQKSPPVQESQSERLQ 250



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>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion|
           2 protein)
          Length = 314

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   IPPPPPELQTLVAAPPP 51
           +PPPPP  Q+L A+PPP
Sbjct: 269 LPPPPPLPQSLTASPPP 285



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>IF2_METCA (Q609C0) Translation initiation factor IF-2|
          Length = 868

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 280 IPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQ 429
           IPRP P PRP   P A  P+ ++ +      R  +A+G +  A   R+D+
Sbjct: 195 IPRPAPEPRPPARPSAGKPKAEAPRAHPAE-RETEARGDKRSAGLSRKDE 243



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>Y2023_MYCBO (P64918) Hypothetical protein Mb2023|
          Length = 537

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 481 VPRLQPQNLERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTADGAPE 320
           V  L+ + L R+ +   +G V R   T + L+ G     P  L  + TADGAP+
Sbjct: 348 VSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAPQ 401



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>Y2000_MYCTU (P64917) Hypothetical protein Rv2000/MT2056|
          Length = 537

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 481 VPRLQPQNLERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTADGAPE 320
           V  L+ + L R+ +   +G V R   T + L+ G     P  L  + TADGAP+
Sbjct: 348 VSHLELEQLRRIRDIVRMGHVQRIEPTTIVLDGGSVPATPTALYIDCTADGAPQ 401



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>APXL_HUMAN (Q13796) Apical-like protein (APXL protein)|
          Length = 1616

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +1

Query: 295 PLPRPGQDPLAHHPRYDSAQDREGRGRACQA-QGVRGCAAAVRQDQAHGHSRRAQGSEAA 471
           P P  GQ P  H P+ +   D    GR     +G  GC+A  ++      + +A    AA
Sbjct: 508 PPPTVGQSPRHHLPQPEGPPDARETGRCYPLDKGAEGCSAGAQEPPRASRAEKASQRLAA 567

Query: 472 A--WA 480
           +  WA
Sbjct: 568 SITWA 572



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>RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13|
          Length = 142

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
 Frame = +2

Query: 107 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 250
           VDA + +LGR AS ++  L              G  ++V+   +I ++G     K+ Y  
Sbjct: 18  VDATNKILGRFASAISIRLRGKHKIEYTPHLDTGDYIIVLNASKILVTGQKKINKVYYHH 77

Query: 251 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 397
                   +     I  + PAK++   ++GM+P K + G +   +LK +
Sbjct: 78  TGYIGGIKQLRFEEIMLKNPAKVIEIAVKGMLP-KGSLGRSMFKKLKVF 125



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>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +1

Query: 4   PPPPPELQTLVAAPPP 51
           PPPPP L   VA PPP
Sbjct: 488 PPPPPPLHAFVAPPPP 503



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>PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP)
          Length = 448

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +1

Query: 364 GRGRACQAQGVRGC-AAAVRQDQAHGHSRRAQGSEAAAWAQVLPPGPALQGG 516
           G GRA    G  G  A  V Q  AH  +  AQGS A      + P P   GG
Sbjct: 96  GTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGG 147



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>CAPG_HUMAN (P40121) Macrophage capping protein (Actin-regulatory protein|
           CAP-G)
          Length = 348

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 364 GRGRACQAQGVRGCAAAVRQDQAHGHSRR---AQGSEAAAWAQVLPPGPALQGGRME 525
           G+    +    R  A A+R  +  G ++      G E A   QVL P PAL+ G  E
Sbjct: 180 GKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGNPE 236



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>CAPG_MOUSE (P24452) Macrophage capping protein (Myc basic motif homolog 1)|
           (Actin-capping protein GCAP39)
          Length = 352

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 364 GRGRACQAQGVRGCAAAVRQDQAHGHSRR---AQGSEAAAWAQVLPPGPALQGGRME 525
           G+    +    R  A A+R  +  G ++      G E A   QVL P PAL+ G  E
Sbjct: 182 GKSNILERNKARDLALAIRDSERQGKAQVEIITDGEEPAEMIQVLGPKPALKEGNPE 238



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>VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymerase accessory|
           protein) (PAP) (ICP36 protein)
          Length = 433

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 50  GGGAATRVWSSGGGGG 3
           GGG+ TR  SSGGGGG
Sbjct: 345 GGGSGTRKMSSGGGGG 360



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>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +1

Query: 4  PPPPPELQTLVAAPPP 51
          PPPPP L    AAPPP
Sbjct: 52 PPPPPPLPLAAAAPPP 67



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>MADCA_MOUSE (Q61826) Mucosal addressin cell adhesion molecule 1 precursor|
           (MAdCAM-1) (mMAdCAM-1)
          Length = 405

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 424 DQAHGHSRRAQGSEAAAWAQVLPPGPALQG 513
           D A  H R A    A AW  VLPPGP ++G
Sbjct: 311 DLATYHKREAG---AQAWLSVLPPGPMVEG 337



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>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)|
          Length = 756

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = -3

Query: 463 QNLERVGNDHALGPVVRRRHTLVRLEPGKRGLAPRGLVRNHTADGAPEDLGRGAEVDGAV 284
           + L R   D   G VV +     +LEPG    +P       T +GAPED+  G ++  A 
Sbjct: 386 ETLLRGPEDMKPGRVVIKEEGESKLEPGDEEASPP------TQEGAPEDVPDGGKISKAF 439

Query: 283 GWLG 272
             LG
Sbjct: 440 EKLG 443



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>PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A activator 1 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1)
           (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl
           phosphatase activator 1)
          Length = 424

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 222 RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTT 103
           +PP+  ++S  TTTT   +SSS + I    P+ W   +TT
Sbjct: 371 KPPETTLNSTTTTTTTTKVSSSTSKIPF-TPAPWANTTTT 409



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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -1

Query: 225  TRPPDMQISSQRTTTTRCPLSSSLATID-ARRPSMWWRASTTTRLAHTPEPDTISPLT 55
            T PP     S  TTTT  P + +  T      PS     +TT     TP P T +P+T
Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627



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>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the|
           cerebellum 5)
          Length = 639

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 271 HQAIPRPHPLPRPGQDPLAHHPRYDSA 351
           H   P P P P P Q P  HHP    A
Sbjct: 330 HAPPPAPPPPPAPAQHPHQHHPHLPGA 356



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>PPARB_MOUSE (P35396) Peroxisome proliferator-activated receptor delta|
           (PPAR-delta) (PPAR-beta) (Nuclear hormone receptor 1)
           (NUC1)
          Length = 440

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 191 RCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHF-RAPAKILWRTIRGMIPHKTARG 367
           +C+ IC      R K +Y RF +K +    SH  I F R P     + + G+   +  + 
Sbjct: 109 KCDRICKIQKKNRNKCQYCRF-QKCLALGMSHNAIRFGRMPEAEKRKLVAGLTASEGCQH 167

Query: 368 EAALARLKAY 397
              LA LKA+
Sbjct: 168 NPQLADLKAF 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,074,518
Number of Sequences: 219361
Number of extensions: 1430605
Number of successful extensions: 7602
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 5930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7420
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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