ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart28c03 |
|---|---|
| Clone Library Name | barley_pub |
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 260 bits (665), Expect = 2e-69 Identities = 128/160 (80%), Positives = 133/160 (83%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MK NIANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEFKGY+FKIMGGCDKQG Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVN 583 NDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR YVN Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVN 160
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 259 bits (663), Expect = 3e-69 Identities = 127/160 (79%), Positives = 134/160 (83%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MK N+ANPTTGCQKK+EIDDDQKLR YDKRISQEV GD LGEEFKGY+FKI GGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVN 583 NDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR+YVN Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVN 160
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 258 bits (658), Expect = 1e-68 Identities = 125/160 (78%), Positives = 134/160 (83%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MK N+ANPTTGCQKK+EIDDDQKLR +DKR+SQEV GD LGEEFKGY+FKIMGGCDKQG Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLLHRGTPCF CIVS DLSV+NLVIVKKG Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVN 583 +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR YVN Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVN 160
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 196 bits (499), Expect = 3e-50 Identities = 98/159 (61%), Positives = 117/159 (73%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 196 bits (499), Expect = 3e-50 Identities = 98/159 (61%), Positives = 117/159 (73%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 196 bits (499), Expect = 3e-50 Identities = 98/159 (61%), Positives = 117/159 (73%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 193 bits (490), Expect = 3e-49 Identities = 96/159 (60%), Positives = 116/159 (72%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++ +R Y+KR++ EV D LGEE+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIVKKGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 192 bits (488), Expect = 6e-49 Identities = 94/159 (59%), Positives = 118/159 (74%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVI++KGE Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTD+ PR GPKRAS+I+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 190 bits (482), Expect = 3e-48 Identities = 94/159 (59%), Positives = 116/159 (72%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E++D++KLR Y+KR++ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CIV +LSV+NLVIV+KGE Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTD PR GPKRAS+I+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 190 bits (482), Expect = 3e-48 Identities = 95/159 (59%), Positives = 116/159 (72%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++KLR Y+KR++ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CI +LSV+NLVI+KKGE Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTD+ PR GPKRASKI+KLFNL K+DDVR YV Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV 157
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 189 bits (479), Expect = 7e-48 Identities = 95/159 (59%), Positives = 115/159 (72%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P TGCQK +E+DD++KLR YDKRIS E+ D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+ RVRLLL + C+ CIV +LSV++LVI+KKGE Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTD PR GPKRASKI+KLFNL K+DDVR YV Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV 157
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 189 bits (479), Expect = 7e-48 Identities = 92/159 (57%), Positives = 117/159 (73%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MK+NI+ P TGCQK +E+DD++KLR Y+KR+S ++ + LG+E+KGY+ +I GG DKQG Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+GRVRLLL +G C+ CIV +LSV+NLVI+KKGE Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRA +I+KLFNL K+DDVR YV Sbjct: 119 QDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV 157
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 182 bits (463), Expect = 5e-46 Identities = 91/159 (57%), Positives = 112/159 (70%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E+KGY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+ RVRLLL +G C+ CIV Q+LS + L++VKKGE Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRAS I+KL+NL K+DDVR +V Sbjct: 119 KDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV 157
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 180 bits (457), Expect = 2e-45 Identities = 91/159 (57%), Positives = 111/159 (69%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLN++ P TG QK E+ DD KLR+ YDKR+ E+ D LG+E+KGY+FKI GG DKQG Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+ RVRLLL +G C+ CIV Q+LS + L++VKKGE Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT R GPKRAS I+KL+NL K+DDVR YV Sbjct: 119 KDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV 157
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 179 bits (454), Expect = 5e-45 Identities = 90/159 (56%), Positives = 112/159 (70%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV DLLG+E+KGY+ ++ GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+ RVRLL+ +G C+ CIV +LSV+ LVIV+KGE Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 ++PGLTD PR GPKRASKI+KLFNL K+DDVR YV Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 157
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 179 bits (453), Expect = 7e-45 Identities = 90/159 (56%), Positives = 112/159 (70%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLN++ P TGCQK E+ D+ KLR Y+KR+ Q V D+LG+E+KGY +I GG DKQG Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT GRVRLLL +G C+ CIV ++SV+ LV++KKGE Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTDT PR GPKRASKI+KL+NL K+DDVR +V Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV 157
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 177 bits (449), Expect = 2e-44 Identities = 90/159 (56%), Positives = 111/159 (69%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLN++ P TGCQK E+ D+ KLR Y+KR+ EV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVLT+ RVRLL+ +G C+ CIV +LSV+ LVIV+KGE Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 ++PGLTD PR GPKRASKI+KLFNL K+DDVR YV Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 157
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 175 bits (443), Expect = 1e-43 Identities = 90/159 (56%), Positives = 108/159 (67%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPM QGVL RVRLLL G PC+ CIV QDL+V+ L IVK+GE Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTD P+ GPKRASKI++ FNL K+DDVR +V Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV 157
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 174 bits (442), Expect = 1e-43 Identities = 89/159 (55%), Positives = 108/159 (67%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK +EIDDD++LR +KR+ QEV GD +G EF GY+FKI GG DKQG Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPM QGVL RVRLLL G PC+ CIV QDL+V+ L I+K+GE Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+PGLTD P+ GPKRASKI++ FNL K+DDVR +V Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV 157
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 172 bits (436), Expect = 6e-43 Identities = 87/159 (54%), Positives = 112/159 (70%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 M+LN A P TG QK E+D+++KLR ++KR+SQEV D LG+E+KGY+ +I GG DKQG Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQG+LT+GRVRLLL +G C+ CIV ++S ++LVIVKKG+ Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 ++ GLTD+ PR GPKRASKI+KLFNL K DDV YV Sbjct: 119 GEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYV 157
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 168 bits (426), Expect = 9e-42 Identities = 84/159 (52%), Positives = 111/159 (69%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK ++I+D+ KLR Y+KR+ QEV GD +G+EFKGYIF+I GG DKQG Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGV+ RV+LLL +G C+ CIV+QDL+V+ L +VK+G+ Sbjct: 61 FPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGD 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 +D+ GLTDT P+ GPKRA+ I+K F L K+DDVR +V Sbjct: 119 SDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV 157
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 167 bits (423), Expect = 2e-41 Identities = 86/159 (54%), Positives = 107/159 (67%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNIA P G QK VE+DD+ ++R YDKRI QE+ G+ +G+EFKGY FKI GG DKQG Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVL RV+LLL +G C+ IV DL+V++LVIVKKGE Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 +L G+TD P+ GPKRA+ I+K F L K+DDVR +V Sbjct: 119 QELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV 157
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 167 bits (423), Expect = 2e-41 Identities = 85/159 (53%), Positives = 108/159 (67%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNIA P G QK ++I+D+ ++R Y+KR+ QEV D LG+EFKGY+ KI GG DKQG Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGV+ RVRLLL + + C+ CIVS DLSV+++VIVK+G+ Sbjct: 61 FPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGD 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 D+ GLT PR GPKRA+ I+KLF L K+DDVR YV Sbjct: 119 ADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV 157
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 166 bits (419), Expect = 6e-41 Identities = 85/159 (53%), Positives = 106/159 (66%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK EIDD+ ++R +DKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVL R++LLL + C+ IV DL+V+ LVIVKKGE Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 +L GLTDT P+ GPKRA+ I+K F L K+DDVR +V Sbjct: 119 QELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV 157
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 165 bits (417), Expect = 1e-40 Identities = 85/159 (53%), Positives = 108/159 (67%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK VEIDD+ ++R YDKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVL RV+LL+ +GT C+ IV DL+V+ LVIVKKG+ Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGD 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV Sbjct: 119 QEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV 157
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 164 bits (415), Expect = 2e-40 Identities = 81/159 (50%), Positives = 107/159 (67%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK +E+DD+ ++R YDKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVL RV+LL+ +GT C+ IV DL+V+ L+I KKG+ Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGD 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 ++ G+T+ P+ GPKRA+ I+K F L KDDDVR +V Sbjct: 119 QEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV 157
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 162 bits (409), Expect = 9e-40 Identities = 83/159 (52%), Positives = 106/159 (66%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQG 283 MKLNI+ P G QK +EIDD+ ++R YDKRI QEV G+ +G+EFKGY+FKI GG DKQG Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60 Query: 284 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 FPMKQGVL RV+LLL +G C+ IV DL+V+ L+I KKGE Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGE 118 Query: 464 NDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV Sbjct: 119 QEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV 157
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 158 bits (400), Expect = 1e-38 Identities = 79/115 (68%), Positives = 87/115 (75%) Frame = +2 Query: 239 KGYIFKIMGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 418 KGY+FKIMGGCDKQGFPMKQGVLT GRVRLLL+RGTPCF CIVS Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60 Query: 419 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVN 583 DLSV+NLVIVKKGENDLPGLTDTEKPRMRGP+ + + L+ K+DDVR YVN Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVN 113
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 144 bits (363), Expect = 2e-34 Identities = 76/160 (47%), Positives = 97/160 (60%), Gaps = 1/160 (0%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 280 MKLNIA P G K+ EI D+ R L D R+ EV G + G EFKGYIF++ GG DK Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 281 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 460 GFPM GVL S RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 461 ENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 + + G+TDT PR GPKRASKI+KLFNL + +DVR YV Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV 160
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 141 bits (356), Expect = 1e-33 Identities = 75/160 (46%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Frame = +2 Query: 104 MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 280 M LNIA P G K+ EI D+ R L D R+ EV G + G EFKGYIF++ GG DK Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60 Query: 281 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 460 GFPM GVL S RV LL+ RG F C+++ D++++N+ I K G Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120 Query: 461 ENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYV 580 + + G+TDT PR GPKRASKI+KLFNL + +DVR YV Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV 160
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 87.4 bits (215), Expect = 3e-17 Identities = 50/137 (36%), Positives = 78/137 (56%) Frame = +2 Query: 152 EIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVRLL 331 EI+ ++R LYDK+I + G +LGEEF+G I +I GG D QGFPM G LT RVR L Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61 Query: 332 LHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRG 511 L +G + IVS+++ V+NL+I++ GE ++ GLT+ Sbjct: 62 LSKGDAGYRCRRKGVRRRKSVRGS--IVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119 Query: 512 PKRASKIKKLFNLGKDD 562 P++ K++K+F + ++ Sbjct: 120 PRKEKKLRKMFGVPDEE 136
>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e| Length = 125 Score = 53.1 bits (126), Expect = 6e-07 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 9/91 (9%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 250 +T KL I+NP G K+VEI + + L +RI +E+ + ++ GEE Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAK 60 Query: 251 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 343 KI GG DK GFPM+ V RV++LL RG Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 53.1 bits (126), Expect = 6e-07 Identities = 40/125 (32%), Positives = 59/125 (47%) Frame = +2 Query: 107 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGF 286 K+ +A+P +VE+ + L KRI + G+++G GY KI GG DK GF Sbjct: 5 KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61 Query: 287 PMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGEN 466 PM+ + RVRLLL G P F +S+D+ +N VIV+ G+ Sbjct: 62 PMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT--ISEDIVQVNTVIVEYGDK 118 Query: 467 DLPGL 481 + L Sbjct: 119 PVEEL 123
>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e| Length = 125 Score = 52.8 bits (125), Expect = 7e-07 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 250 +T KL I++P TG K++EI + L KRI ++ + +L G+EF + Sbjct: 2 ATFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVK 60 Query: 251 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 343 +I GG DK GFPM+ + RVR+LL +G Sbjct: 61 MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_METJA (P54067) 30S ribosomal protein S6e| Length = 131 Score = 51.6 bits (122), Expect = 2e-06 Identities = 40/131 (30%), Positives = 61/131 (46%) Frame = +2 Query: 101 TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQ 280 T K +A+P TG ++E D+ L K+I + G ++G E GY +I GG D Sbjct: 3 TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIGLE--GYKLQIRGGTDSS 56 Query: 281 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 460 GFPM+ + S +VR+LL P F ++ D+ IN+ +V+ G Sbjct: 57 GFPMRPDIHGSRKVRVLL-SAPPGFKPKRKGERRRKTVRGNT--IAPDIVQINVKVVEYG 113 Query: 461 ENDLPGLTDTE 493 E +P L E Sbjct: 114 EKSIPELLGLE 124
>RS6E_METTH (O26360) 30S ribosomal protein S6e| Length = 126 Score = 51.6 bits (122), Expect = 2e-06 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Frame = +2 Query: 140 QKKVEID-DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSG 316 +K V+++ D + R L I E G ++G GY KI GG DK GFPMK+ V + Sbjct: 11 EKSVQMEVDPSESRGLIGLTIGDEFDGSIIG--LSGYKLKITGGSDKNGFPMKKTVPGAR 68 Query: 317 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDLPGLTDTEK 496 R+R L+ G +S D+ IN V+++KGE L L ++ Sbjct: 69 RIRSLVSGGV---GYKPRRDGERRRKTFRGNTISDDIVQINTVVIEKGEKPLEELLGADE 125
>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e| Length = 125 Score = 50.8 bits (120), Expect = 3e-06 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 250 +T KL I++P +G K+VEI + L KRI ++ + +L G+EF + Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVK 60 Query: 251 FKIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 343 +I GG DK GFPM+ + RVR+LL +G Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
>RS6E_PYRHO (O58349) 30S ribosomal protein S6e| Length = 125 Score = 47.4 bits (111), Expect = 3e-05 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 9/91 (9%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFK------- 256 +T KL I++P +G K++EI L K+I ++ LG + K K Sbjct: 2 TTFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVK 60 Query: 257 --IMGGCDKQGFPMKQGVLTSGRVRLLLHRG 343 I GG DK GFPM+ + RVR+LL +G Sbjct: 61 MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e| Length = 127 Score = 45.1 bits (105), Expect = 2e-04 Identities = 36/119 (30%), Positives = 52/119 (43%) Frame = +2 Query: 116 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 295 IA+ TG K EID + + L +RI E+ G E GY KI GG GFPMK Sbjct: 6 IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62 Query: 296 QGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGENDL 472 + + +G+ R+L+ IV D+S +N++I + G L Sbjct: 63 KDLPIAGKKRILI----TYTHGRKGKNGIRKRVTLRGNIVGSDISQLNMIITQYGPQPL 117
>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e| Length = 124 Score = 42.7 bits (99), Expect = 8e-04 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Frame = +2 Query: 116 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 295 IA+P TG K EI + ++ +L ++I E+ G + GY + GG GFPM+ Sbjct: 4 IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60 Query: 296 QGVLTSGRVRLLL-----HRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKG 460 + T G+ ++L+ +RG I+ D+S INL IV+ G Sbjct: 61 SDLQTQGKKQILVSYKKGYRG---------KNGIRKRITVRGSIIGSDISQINLKIVQYG 111 Query: 461 ENDLPGLTDTEK 496 L D ++ Sbjct: 112 PTPLEEKKDDQQ 123
>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e| Length = 126 Score = 41.2 bits (95), Expect = 0.002 Identities = 27/76 (35%), Positives = 42/76 (55%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 277 S +K+ +++P +G ++E + Q L Y K+I + G +G + GY KI GG D Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59 Query: 278 QGFPMKQGVLTSGRVR 325 GFPM++ V G VR Sbjct: 60 AGFPMRKEV--EGAVR 73
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e| Length = 129 Score = 40.4 bits (93), Expect = 0.004 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 2/118 (1%) Frame = +2 Query: 116 IANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFP 289 I++P TG QK VE L K+I + G ++ Y KI GG D+ GFP Sbjct: 7 ISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLP-PDYELKITGGTDRDGFP 62 Query: 290 MKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKKGE 463 M+ + + R RLLL G ++S+D+ IN V+VK G+ Sbjct: 63 MRPDLPGTARRRLLLSGGV---GFRPKEKGLRKRKGVRGRVISKDILQINTVVVKHGK 117
>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e| Length = 131 Score = 37.7 bits (86), Expect = 0.024 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 277 +T ++ +A+P +G + E+D Q + I V G +G + GY +I GG D Sbjct: 2 ATFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58 Query: 278 QGFPMKQGVLTSGRVRLLLHRG 343 G PM++ V S + +LL G Sbjct: 59 AGRPMREDVDGSDLMEVLLEGG 80
>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e| Length = 136 Score = 37.7 bits (86), Expect = 0.024 Identities = 26/82 (31%), Positives = 39/82 (47%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 277 + K+ +++P G +++I D + L K I V G + G GY +I GGCD Sbjct: 2 ANFKVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDG 58 Query: 278 QGFPMKQGVLTSGRVRLLLHRG 343 GF MK + R R+L G Sbjct: 59 SGFVMKPDLPGPRRQRILTATG 80
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e| Length = 245 Score = 37.0 bits (84), Expect = 0.042 Identities = 27/70 (38%), Positives = 35/70 (50%) Frame = +2 Query: 146 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVR 325 ++ + DD ++ L I G L+G G FKI GG D G PM GV SGR + Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192 Query: 326 LLLHRGTPCF 355 +LL G P F Sbjct: 193 VLL-AGPPGF 201
>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e| Length = 213 Score = 36.6 bits (83), Expect = 0.055 Identities = 29/98 (29%), Positives = 42/98 (42%) Frame = +2 Query: 161 DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSGRVRLLLHR 340 D KL N+ +I + ++ G K KI GG D GFPM+ V G R LL Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDV-PGGAKRKLLLS 177 Query: 341 GTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 454 G P F +++QD+ IN +I++ Sbjct: 178 GPPGFYPEEDGMRRKKTVRGN--MITQDIVQINTIIIR 213
>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e| Length = 136 Score = 36.2 bits (82), Expect = 0.071 Identities = 25/82 (30%), Positives = 38/82 (46%) Frame = +2 Query: 98 STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDK 277 + K+ +++P +++I D + L K I V G + G GY +I GGCD Sbjct: 2 ANFKVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDG 58 Query: 278 QGFPMKQGVLTSGRVRLLLHRG 343 GF MK + R R+L G Sbjct: 59 SGFVMKPDLPGPRRQRILTATG 80
>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e| Length = 214 Score = 33.5 bits (75), Expect = 0.46 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Frame = +2 Query: 143 KKVEIDDDQ-KLRNLYDKRISQEV-VGDLLGEEFKGYIFKIMGGCDKQGFPMKQGVLTSG 316 K ++I DQ K NL +I L+G K KI GG D GFPM+ V+ + Sbjct: 115 KTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAA 171 Query: 317 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 454 + ++LL G P F +SQ++ IN +IV+ Sbjct: 172 KRKILL-SGPPGFYPNENGERRRKTIRGNT--ISQEIVQINTIIVR 214
>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)| Length = 128 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +2 Query: 116 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFKIMGGCDKQGFPMK 295 +++P G ++++D Q + + EV G +G + GY ++ GG D G PM+ Sbjct: 7 VSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVGLD--GYSLELTGGSDTSGRPMR 63 Query: 296 QGV 304 V Sbjct: 64 PDV 66
>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c| Length = 163 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +2 Query: 143 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 235 +KV D +QK+R+ YD +S V+G+L+ +E Sbjct: 85 EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115
>RPGF6_HUMAN (Q8TEU7) Rap guanine nucleotide exchange factor 6 (PDZ| domain-containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2) Length = 1601 Score = 29.3 bits (64), Expect = 8.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 523 SPLGSPHPGLLSVSKAW*IILTLLDNHQVDNRQVLADNATTDGLSPAL 380 SP GSPH G + A L+ + ++ +R + N + D +S AL Sbjct: 1241 SPQGSPHKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAAL 1288
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 5/52 (9%) Frame = -1 Query: 233 PHPEDHQLPPGRFSCHKGSAASGRHRSR-----PSSGTPWWGSRCSTSWWSG 93 P P GR S G G HR P SGTP G R ++W G Sbjct: 1265 PGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRG 1316 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,243,805 Number of Sequences: 219361 Number of extensions: 1599035 Number of successful extensions: 5286 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 5014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5249 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
