Clone Name | bart28c02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y5621_ARATH (O81488) PHD finger protein At5g26210 | 175 | 1e-51 | 2 | CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-) | 29 | 8.3 | 3 | CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1 | 29 | 8.3 |
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>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 175 bits (444), Expect(2) = 1e-51 Identities = 84/114 (73%), Positives = 92/114 (80%) Frame = +1 Query: 142 AGGAYVARTAEEVFRDLRGRRAGMIKALTEDVDKFFKLCDPEKENLCLYGYPNETWEVTL 321 AGGAY RT EEVFRD +GRRAGMIKALT DV +FF+LCDPEKENLCLYG+PNE WEV L Sbjct: 3 AGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNL 62 Query: 322 XXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFD 483 LGINFARDGM EKDWL+LVAVHSD+WLL+VAF+FGARFGFD Sbjct: 63 PAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFD 116 Score = 47.4 bits (111), Expect(2) = 1e-51 Identities = 20/29 (68%), Positives = 26/29 (89%) Frame = +3 Query: 486 NRRRLFNMINNLPTIYEVVTGIAKKQSKE 572 +R+RLFNM+N+LPTI+EVV G AKKQ K+ Sbjct: 119 DRKRLFNMVNDLPTIFEVVAGTAKKQGKD 147
>CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-)| Length = 720 Score = 29.3 bits (64), Expect = 8.3 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 354 FRDLWGHFLSWQGHF 310 F++LWGH +SWQ F Sbjct: 616 FQELWGHLMSWQATF 630
>CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1| Length = 492 Score = 29.3 bits (64), Expect = 8.3 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -2 Query: 272 SFSGSQSLKNLSTSSVRALIMPARRPRRSRKTSSAVRATYAPPAPAPSMGGRRQ 111 S S S + N + + +L +P+R P++ + T S+ P P +G R Q Sbjct: 122 SSSNSSNNNNNDANRLASLAVPSRLPQKRQATESSTNLVEKLRVPQPEVGERSQ 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,879,500 Number of Sequences: 219361 Number of extensions: 1144720 Number of successful extensions: 3623 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3619 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)