ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart28b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092B19, full insert sequence Length = 1157 Score = 466 bits (235), Expect = e-128 Identities = 376/423 (88%) Strand = Plus / Plus Query: 158 gtcgtcgtggaactcggtggggctgggggtgctctaccaggtcatcgggtgggtcgcctt 217 |||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| Sbjct: 99 gtcgtcgtggaactcggtggggatggaggtgctgtaccaggtgctcgggtgggtcgcctt 158 Query: 218 cttcgcctggtccttcagcttctacccgcaggtcgtcctcaactacaggcgcaagagtgt 277 |||||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||| Sbjct: 159 cttcgcttggtccttcagcttctacccgcaggtcttcctcaacttcaagcgcaagagtgt 218 Query: 278 cgtgggtctgaacttcgattttctggtgctgaatttcacaaagcactcttcccacctcat 337 |||||||||||||| |||||||||||| |||| || ||||||||||| ||| ||||||| Sbjct: 219 ggtgggtctgaactttgattttctggtgttgaacttgacaaagcactcatccaacctcat 278 Query: 338 atacaatgctgctctattcttcagccccttcattcagaaacagtatcatgacaagtttgg 397 ||||||||||||||||||||||||||||||||| |||| |||||||||||| | | ||| Sbjct: 279 atacaatgctgctctattcttcagccccttcatccagagacagtatcatgagacatatgg 338 Query: 398 tgataaagagatgattcctgttgccgcaaatgatgttgctttctctctacatgcagtggc 457 ||||||||||||||||||||| || |||||||||||||| || ||| |||| || || || Sbjct: 339 tgataaagagatgattcctgtcgcggcaaatgatgttgccttttctgtacacgcggttgc 398 Query: 458 cttgacatcttttaccctttaccaagtatttatttatgagcgtggacagcagaaagtctc 517 ||||||| |||||||||||| |||||||| || || ||||| ||| | |||||| |||| Sbjct: 399 cttgacagcttttaccctttttcaagtattcatctacgagcgaggaaaccagaaaatctc 458 Query: 518 caaagtgtgcatatcaatcaccgctgttgtctggtcagctgctatcgtttgcctaattgt 577 |||||| |||||||||||||| ||| |||| ||| |||||||||| |||||||| ||||| Sbjct: 459 caaagtctgcatatcaatcactgctattgtgtggacagctgctattgtttgccttattgt 518 Query: 578 agc 580 ||| Sbjct: 519 agc 521
>dbj|AK068027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134P03, full insert sequence Length = 1373 Score = 466 bits (235), Expect = e-128 Identities = 376/423 (88%) Strand = Plus / Plus Query: 158 gtcgtcgtggaactcggtggggctgggggtgctctaccaggtcatcgggtgggtcgcctt 217 |||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| Sbjct: 339 gtcgtcgtggaactcggtggggatggaggtgctgtaccaggtgctcgggtgggtcgcctt 398 Query: 218 cttcgcctggtccttcagcttctacccgcaggtcgtcctcaactacaggcgcaagagtgt 277 |||||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||| Sbjct: 399 cttcgcttggtccttcagcttctacccgcaggtcttcctcaacttcaagcgcaagagtgt 458 Query: 278 cgtgggtctgaacttcgattttctggtgctgaatttcacaaagcactcttcccacctcat 337 |||||||||||||| |||||||||||| |||| || ||||||||||| ||| ||||||| Sbjct: 459 ggtgggtctgaactttgattttctggtgttgaacttgacaaagcactcatcctacctcat 518 Query: 338 atacaatgctgctctattcttcagccccttcattcagaaacagtatcatgacaagtttgg 397 ||||||||||||||||||||||||||||||||| |||| |||||||||||| | | ||| Sbjct: 519 atacaatgctgctctattcttcagccccttcatccagagacagtatcatgagacatatgg 578 Query: 398 tgataaagagatgattcctgttgccgcaaatgatgttgctttctctctacatgcagtggc 457 ||||||||||||||||||||| || |||||||||||||| || ||| |||| || || || Sbjct: 579 tgataaagagatgattcctgtcgcggcaaatgatgttgccttttctgtacacgcggttgc 638 Query: 458 cttgacatcttttaccctttaccaagtatttatttatgagcgtggacagcagaaagtctc 517 ||||||| |||||||||||| |||||||| || || ||||| ||| | |||||| |||| Sbjct: 639 cttgacagcttttaccctttttcaagtattcatctacgagcgaggaaaccagaaaatctc 698 Query: 518 caaagtgtgcatatcaatcaccgctgttgtctggtcagctgctatcgtttgcctaattgt 577 |||||| |||||||||||||| ||| |||| ||| |||||||||| |||||||| ||||| Sbjct: 699 caaagtctgcatatcaatcactgctattgtgtggacagctgctattgtttgccttattgt 758 Query: 578 agc 580 ||| Sbjct: 759 agc 761
>gb|AY108938.1| Zea mays PCO143033 mRNA sequence Length = 613 Score = 387 bits (195), Expect = e-104 Identities = 339/388 (87%) Strand = Plus / Plus Query: 148 cggccatgtcgtcgtcgtggaactcggtggggctgggggtgctctaccaggtcatcgggt 207 ||||||||||||||||||||||||||||||| |||| | | || |||||||| | || | Sbjct: 134 cggccatgtcgtcgtcgtggaactcggtgggtctggcgatcctgtaccaggtgctgggct 193 Query: 208 gggtcgccttcttcgcctggtccttcagcttctacccgcaggtcgtcctcaactacaggc 267 ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| || Sbjct: 194 gggtcgccttcgccgcgtggtccttcagcttctacccgcaggtcctcctcaactacaagc 253 Query: 268 gcaagagtgtcgtgggtctgaacttcgattttctggtgctgaatttcacaaagcactctt 327 |||||||||| ||||| ||||| ||||||||||||||| |||| || ||||||||||| | Sbjct: 254 gcaagagtgttgtgggcctgaatttcgattttctggtgttgaacttgacaaagcactcgt 313 Query: 328 cccacctcatatacaatgctgctctattcttcagccccttcattcagaaacagtatcatg 387 || |||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||| Sbjct: 314 cctacctcatatacaatgctgctctcttcttcagcccattcatccagcaacagtatcatg 373 Query: 388 acaagtttggtgataaagagatgattcctgttgccgcaaatgatgttgctttctctctac 447 |||| | ||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 374 acaaatatggtgataaagagatgattcctgttgctgcaaatgatgttgctttttcactgc 433 Query: 448 atgcagtggccttgacatcttttaccctttaccaagtatttatttatgagcgtggacagc 507 |||| || || |||||| | |||||| ||| |||||||| || | |||||| | | | Sbjct: 434 atgctgtagcattgacagcctttaccgtttttcaagtattcatatntgagcgagnancac 493 Query: 508 agaaagtctccaaagtgtgcatatcaat 535 |||||||||||||||| ||||||||||| Sbjct: 494 agaaagtctccaaagtttgcatatcaat 521
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 165 bits (83), Expect = 2e-37 Identities = 122/135 (90%) Strand = Plus / Minus Query: 273 agtgtcgtgggtctgaacttcgattttctggtgctgaatttcacaaagcactcttcccac 332 ||||| |||||||||||||| |||||||||||| |||| || ||||||||||| ||| || Sbjct: 10423015 agtgtggtgggtctgaactttgattttctggtgttgaacttgacaaagcactcatcctac 10422956 Query: 333 ctcatatacaatgctgctctattcttcagccccttcattcagaaacagtatcatgacaag 392 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | Sbjct: 10422955 ctcatatacaatgctgctctattcttcagccccttcatccagagacagtatcatgagaca 10422896 Query: 393 tttggtgataaagag 407 | ||||||||||||| Sbjct: 10422895 tatggtgataaagag 10422881 Score = 161 bits (81), Expect = 3e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 158 gtcgtcgtggaactcggtggggctgggggtgctctaccaggtcatcgggtgggtcgcctt 217 |||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| Sbjct: 10424513 gtcgtcgtggaactcggtggggatggaggtgctgtaccaggtgctcgggtgggtcgcctt 10424454 Query: 218 cttcgcctggtccttcagcttctacccgcaggtcgtcctcaactacaggcgcaagag 274 |||||| ||||||||||||||||||||||||||| ||||||||| || ||||||||| Sbjct: 10424453 cttcgcttggtccttcagcttctacccgcaggtcttcctcaacttcaagcgcaagag 10424397 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 507 cagaaagtctccaaagtgtgcatatcaatcaccgctgttgtctggtcagctgctatcgtt 566 |||||| |||||||||| |||||||||||||| ||| |||| ||| |||||||||| ||| Sbjct: 10420789 cagaaaatctccaaagtctgcatatcaatcactgctattgtgtggacagctgctattgtt 10420730 Query: 567 tgcctaattgtagc 580 ||||| |||||||| Sbjct: 10420729 tgccttattgtagc 10420716 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 406 agatgattcctgttgccgcaaatgatgttgctttctctctacatgcagtggccttgacat 465 ||||||||||||| || |||||||||||||| || ||| |||| || || ||||||||| Sbjct: 10420967 agatgattcctgtcgcggcaaatgatgttgccttttctgtacacgcggttgccttgacag 10420908 Query: 466 cttttaccctttaccaagtatt 487 |||||||||||| |||||||| Sbjct: 10420907 cttttaccctttttcaagtatt 10420886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 25269206 cgccgccgccgccggccatg 25269187
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 165 bits (83), Expect = 2e-37 Identities = 122/135 (90%) Strand = Plus / Minus Query: 273 agtgtcgtgggtctgaacttcgattttctggtgctgaatttcacaaagcactcttcccac 332 ||||| |||||||||||||| |||||||||||| |||| || ||||||||||| ||| || Sbjct: 10422897 agtgtggtgggtctgaactttgattttctggtgttgaacttgacaaagcactcatcctac 10422838 Query: 333 ctcatatacaatgctgctctattcttcagccccttcattcagaaacagtatcatgacaag 392 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | Sbjct: 10422837 ctcatatacaatgctgctctattcttcagccccttcatccagagacagtatcatgagaca 10422778 Query: 393 tttggtgataaagag 407 | ||||||||||||| Sbjct: 10422777 tatggtgataaagag 10422763 Score = 161 bits (81), Expect = 3e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 158 gtcgtcgtggaactcggtggggctgggggtgctctaccaggtcatcgggtgggtcgcctt 217 |||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| Sbjct: 10424395 gtcgtcgtggaactcggtggggatggaggtgctgtaccaggtgctcgggtgggtcgcctt 10424336 Query: 218 cttcgcctggtccttcagcttctacccgcaggtcgtcctcaactacaggcgcaagag 274 |||||| ||||||||||||||||||||||||||| ||||||||| || ||||||||| Sbjct: 10424335 cttcgcttggtccttcagcttctacccgcaggtcttcctcaacttcaagcgcaagag 10424279 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 507 cagaaagtctccaaagtgtgcatatcaatcaccgctgttgtctggtcagctgctatcgtt 566 |||||| |||||||||| |||||||||||||| ||| |||| ||| |||||||||| ||| Sbjct: 10420671 cagaaaatctccaaagtctgcatatcaatcactgctattgtgtggacagctgctattgtt 10420612 Query: 567 tgcctaattgtagc 580 ||||| |||||||| Sbjct: 10420611 tgccttattgtagc 10420598 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 406 agatgattcctgttgccgcaaatgatgttgctttctctctacatgcagtggccttgacat 465 ||||||||||||| || |||||||||||||| || ||| |||| || || ||||||||| Sbjct: 10420849 agatgattcctgtcgcggcaaatgatgttgccttttctgtacacgcggttgccttgacag 10420790 Query: 466 cttttaccctttaccaagtatt 487 |||||||||||| |||||||| Sbjct: 10420789 cttttaccctttttcaagtatt 10420768 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 25197382 cgccgccgccgccggccatg 25197363
>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130454 Score = 165 bits (83), Expect = 2e-37 Identities = 122/135 (90%) Strand = Plus / Minus Query: 273 agtgtcgtgggtctgaacttcgattttctggtgctgaatttcacaaagcactcttcccac 332 ||||| |||||||||||||| |||||||||||| |||| || ||||||||||| ||| || Sbjct: 75516 agtgtggtgggtctgaactttgattttctggtgttgaacttgacaaagcactcatcctac 75457 Query: 333 ctcatatacaatgctgctctattcttcagccccttcattcagaaacagtatcatgacaag 392 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | Sbjct: 75456 ctcatatacaatgctgctctattcttcagccccttcatccagagacagtatcatgagaca 75397 Query: 393 tttggtgataaagag 407 | ||||||||||||| Sbjct: 75396 tatggtgataaagag 75382 Score = 161 bits (81), Expect = 3e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 158 gtcgtcgtggaactcggtggggctgggggtgctctaccaggtcatcgggtgggtcgcctt 217 |||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| Sbjct: 77014 gtcgtcgtggaactcggtggggatggaggtgctgtaccaggtgctcgggtgggtcgcctt 76955 Query: 218 cttcgcctggtccttcagcttctacccgcaggtcgtcctcaactacaggcgcaagag 274 |||||| ||||||||||||||||||||||||||| ||||||||| || ||||||||| Sbjct: 76954 cttcgcttggtccttcagcttctacccgcaggtcttcctcaacttcaagcgcaagag 76898 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 507 cagaaagtctccaaagtgtgcatatcaatcaccgctgttgtctggtcagctgctatcgtt 566 |||||| |||||||||| |||||||||||||| ||| |||| ||| |||||||||| ||| Sbjct: 73290 cagaaaatctccaaagtctgcatatcaatcactgctattgtgtggacagctgctattgtt 73231 Query: 567 tgcctaattgtagc 580 ||||| |||||||| Sbjct: 73230 tgccttattgtagc 73217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 406 agatgattcctgttgccgcaaatgatgttgctttctctctacatgcagtggccttgacat 465 ||||||||||||| || |||||||||||||| || ||| |||| || || ||||||||| Sbjct: 73468 agatgattcctgtcgcggcaaatgatgttgccttttctgtacacgcggttgccttgacag 73409 Query: 466 cttttaccctttaccaagtatt 487 |||||||||||| |||||||| Sbjct: 73408 cttttaccctttttcaagtatt 73387
>gb|AY108833.1| Zea mays PCO143034 mRNA sequence Length = 869 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 423 gcaaatgatgttgctttctctctacatgcagtggccttgacatcttttaccctttaccaa 482 ||||||||||||||||| || || ||||| || || |||||| | |||||| ||| ||| Sbjct: 14 gcaaatgatgttgctttttcactgcatgctgtagcattgacagcctttaccgtttttcaa 73 Query: 483 gtatttatttatgagcgtggacagcagaaagtctccaaagtgtgcatatcaat 535 ||||| || |||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 74 gtattcatatatgagcgaggaacacagaaagtctccaaagtttgcatatcaat 126
>ref|NM_123432.2| Arabidopsis thaliana unknown protein AT5G40670 mRNA, complete cds Length = 1264 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 399 gataaagagatgattcctgttgccgcaaatgatgttgctttctc 442 |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 501 gataaagagatgatacctgtggctgcaaatgatgttgcattctc 544
>gb|AY060522.1| Arabidopsis thaliana AT5g40670/MNF13_190 mRNA, complete cds Length = 813 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 399 gataaagagatgattcctgttgccgcaaatgatgttgctttctc 442 |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 244 gataaagagatgatacctgtggctgcaaatgatgttgcattctc 287
>gb|AY052257.1| Arabidopsis thaliana AT5g40670/MNF13_190 mRNA, complete cds Length = 1109 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 399 gataaagagatgattcctgttgccgcaaatgatgttgctttctc 442 |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 348 gataaagagatgatacctgtggctgcaaatgatgttgcattctc 391
>emb|BX832239.1|CNS09ZRA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1022 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 399 gataaagagatgattcctgttgccgcaaatgatgttgctttctc 442 |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 305 gataaagagatgatacctgtggctgcaaatgatgttgcattctc 348
>gb|AY085809.1| Arabidopsis thaliana clone 18435 mRNA, complete sequence Length = 1249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 399 gataaagagatgattcctgttgccgcaaatgatgttgctttctc 442 |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 501 gataaagagatgatacctgtggctgcaaatgatgttgcattctc 544
>gb|AF310160.1| Triticum aestivum sucrose-phosphate synthase (SPS1) mRNA, complete cds Length = 3418 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 137 gccgccgccgccggccatgtcgtcg 161 ||||||||||||||||||||||||| Sbjct: 1705 gccgccgccgccggccatgtcgtcg 1681
>ref|NM_197689.1| Oryza sativa (japonica cultivar-group) putative nitrate transporter (OSJNBb0014I11.9), mRNA Length = 2288 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggccatgtcgtc 160 |||||||||||||||||||||| |||| Sbjct: 856 gacgccgccgccgccggccatgacgtc 882
>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence Length = 189250 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 473 cctttaccaagtatttatttatg 495 ||||||||||||||||||||||| Sbjct: 137054 cctttaccaagtatttatttatg 137032
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggccatgtcgtc 160 |||||||||||||||||||||| |||| Sbjct: 92287 gacgccgccgccgccggccatgacgtc 92313
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 134 gacgccgccgccgccggccatgtcgtc 160 |||||||||||||||||||||| |||| Sbjct: 21242072 gacgccgccgccgccggccatgacgtc 21242046 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 13290805 cggacgccgccgccgccggc 13290824 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 8914466 atcggacgccgccgccgccg 8914485
>dbj|AK105765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E01, full insert sequence Length = 2001 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggccatgtcgtc 160 |||||||||||||||||||||| |||| Sbjct: 562 gacgccgccgccgccggccatgacgtc 588
>dbj|AK068409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147D24, full insert sequence Length = 2149 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggccatgtcgtc 160 |||||||||||||||||||||| |||| Sbjct: 955 gacgccgccgccgccggccatgacgtc 981
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 134 gacgccgccgccgccggccatgtcgtc 160 |||||||||||||||||||||| |||| Sbjct: 21253336 gacgccgccgccgccggccatgacgtc 21253310 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 13298145 cggacgccgccgccgccggc 13298164 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 8919605 atcggacgccgccgccgccg 8919624
>ref|NM_191272.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2370 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 ||||||||||||| |||| ||||||||||| Sbjct: 2233 cgccgccgccgccagccacgtcgtcgtcgt 2204
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| | ||||||||||| Sbjct: 94 cgccgccgccgccggcaaggtcgtcgtcgt 65
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 335 catatacaatgctgctctattc 356 |||||||||||||||||||||| Sbjct: 122529 catatacaatgctgctctattc 122508
>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete sequence Length = 189385 Score = 44.1 bits (22), Expect = 0.51 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 325 cttcccacctca-tatacaatgctgctcta 353 |||||||||||| ||||||||||||||||| Sbjct: 8193 cttcccacctcactatacaatgctgctcta 8222
>dbj|AK014709.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833416I09 product:hypothetical protein, full insert sequence Length = 2121 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtc 157 |||||||||||||||||||||| Sbjct: 36 cgccgccgccgccggccatgtc 57
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 141 ccgccgccggccatgtcgtcgtcgtg 166 ||||||||||||||||||||| |||| Sbjct: 15872897 ccgccgccggccatgtcgtcggcgtg 15872872 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 15707307 cgccgccgccgccggccatg 15707288
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| | ||||||||||| Sbjct: 4062912 cgccgccgccgccggcaaggtcgtcgtcgt 4062941 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 140 gccgccgccggccatgtcgtcgtcgt 165 ||||| |||||||||||||||||||| Sbjct: 2100339 gccgctgccggccatgtcgtcgtcgt 2100314
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 ||||||||||||| |||| ||||||||||| Sbjct: 31652892 cgccgccgccgccagccacgtcgtcgtcgt 31652921 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 gccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| ||||||||||| Sbjct: 620112 gccgccgccgccggcctcgtcgtcgtcgt 620140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 19715122 cgccgccgccgccggccatg 19715141 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 12859673 cggacgccgccgccgccggc 12859654
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 ||||||||||||| |||| ||||||||||| Sbjct: 66624 cgccgccgccgccagccacgtcgtcgtcgt 66653
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 141 ccgccgccggccatgtcgtcgtcgtg 166 ||||||||||||||||||||| |||| Sbjct: 36023 ccgccgccggccatgtcgtcggcgtg 35998
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 140 gccgccgccggccatgtcgtcgtcgt 165 ||||| |||||||||||||||||||| Sbjct: 184636 gccgctgccggccatgtcgtcgtcgt 184611
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| | ||||||||||| Sbjct: 55770 cgccgccgccgccggcaaggtcgtcgtcgt 55799
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| | ||||||||||| Sbjct: 94 cgccgccgccgccggcaaggtcgtcgtcgt 65
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 140 gccgccgccggccatgtcgtcgtcgt 165 ||||| |||||||||||||||||||| Sbjct: 56132 gccgctgccggccatgtcgtcgtcgt 56107
>gb|AC117799.9| Mus musculus chromosome 5, clone RP24-556H22, complete sequence Length = 178949 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtc 157 |||||||||||||||||||||| Sbjct: 140965 cgccgccgccgccggccatgtc 140986
>gb|BC086646.1| Mus musculus signal peptide peptidase 3, mRNA (cDNA clone MGC:100275 IMAGE:6817386), complete cds Length = 2683 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatgtc 157 |||||||||||||||||||||| Sbjct: 61 cgccgccgccgccggccatgtc 82
>ref|NM_183537.2| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 137 gccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| ||||||||||| Sbjct: 405 gccgccgccgccggcctcgtcgtcgtcgt 377
>ref|XM_864412.1| PREDICTED: Bos taurus similar to Cystinosin (LOC613527), mRNA Length = 2433 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 264 aggcgcaagagtgtcgtgggtctgaacttcgattttctggt 304 ||||| || |||||||||||||||| |||||| ||| |||| Sbjct: 352 aggcggaaaagtgtcgtgggtctgagcttcgactttgtggt 392
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 139 cgccgccgccggccatgtcgtcgtcgtgg 167 |||||||||||||||||||| || ||||| Sbjct: 333952 cgccgccgccggccatgtcgacgccgtgg 333924
>gb|AC097104.18| Homo sapiens 12 BAC RP11-153M3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106340 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagcagaaagtctccaaagtg 524 ||||||||||||||||||||| Sbjct: 98170 cagcagaaagtctccaaagtg 98150
>gb|AF217189.1|AF217189 Sorangium cellulosum putative transposase gene, partial cds; putative transposase gene, complete cds; epothilone biosynthesis gene cluster, complete sequence; putative membrane protein gene, complete cds Length = 58733 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gccgccggccatgtcgtcgtc 163 ||||||||||||||||||||| Sbjct: 53082 gccgccggccatgtcgtcgtc 53102
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 gccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| ||||||||||| Sbjct: 3856 gccgccgccgccggcctcgtcgtcgtcgt 3884
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 gccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| ||||||||||| Sbjct: 94717 gccgccgccgccggcctcgtcgtcgtcgt 94745
>gb|AE005032.1| Halobacterium sp. NRC-1 section 63 of 170 of the complete genome Length = 11490 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 cgatcggacgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 9258 cgatcggacgccgccgccgcc 9278
>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 agatgattcctgttgccgcaaatgatgttgctttctc 442 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 61349 agatgatacctgtggctgcaaatgatgttgcattctc 61385
>dbj|AK108920.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H07, full insert sequence Length = 945 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 137 gccgccgccgccggccatgtcgtcgtcgt 165 |||||||||||||||| ||||||||||| Sbjct: 405 gccgccgccgccggcctcgtcgtcgtcgt 377
>gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epothilone biosynthesis gene cluster, complete sequence Length = 68750 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 gccgccggccatgtcgtcgtc 163 ||||||||||||||||||||| Sbjct: 58694 gccgccggccatgtcgtcgtc 58714
>ref|XM_476095.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cgccgccggccatgtcgtcgtcgt 165 |||||||||||||| ||||||||| Sbjct: 51 cgccgccggccatggcgtcgtcgt 74
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cgccgccggccatgtcgtcgtcgt 165 |||||||||||||| ||||||||| Sbjct: 110983 cgccgccggccatggcgtcgtcgt 111006
>ref|XM_482642.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 183 gacgccgccgccgccggcca 164
>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein (OSJNBb0044I14.6), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 947 cggacgccgccgccgccggc 966
>ref|NM_183876.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 1043 cggacgccgccgccgccggc 1062
>ref|NM_193274.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 378 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 302 cgccgccgccgccggccatg 283
>ref|XM_469487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 349 cggacgccgccgccgccggc 330
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 315387 atcggacgccgccgccgccg 315406
>gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromosome 12 centromeric region Length = 326112 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 atatacaatgctgctctattcttc 359 |||||||||||| ||||||||||| Sbjct: 290043 atatacaatgctcctctattcttc 290020
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 166221 atcggacgccgccgccgccg 166240
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 141488 cggacgccgccgccgccggc 141469
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cgccgccggccatgtcgtcgtcgt 165 |||||||||||||| ||||||||| Sbjct: 41793 cgccgccggccatggcgtcgtcgt 41816
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgccgccggccatgtcg 158 |||||||||||||||||||| Sbjct: 12299 cgccgccgccggccatgtcg 12318
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgccgccggccatgtcg 158 |||||||||||||||||||| Sbjct: 98616 cgccgccgccggccatgtcg 98635
>ref|XM_869497.1| PREDICTED: Bos taurus similar to CG31163-PB, isoform B (LOC617270), mRNA Length = 507 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggacgccgccgccgccggcc 152 |||||||||||||||||||| Sbjct: 195 ggacgccgccgccgccggcc 214
>ref|XM_365096.1| Magnaporthe grisea 70-15 hypothetical protein (MG09941.4) partial mRNA Length = 4728 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ggccatgtcgtcgtcgtggaactc 172 |||| ||||||||||||||||||| Sbjct: 1284 ggccgtgtcgtcgtcgtggaactc 1261
>ref|XM_454034.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E01914g predicted mRNA Length = 3222 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ccaaagtgtgcatatcaatc 536 |||||||||||||||||||| Sbjct: 2166 ccaaagtgtgcatatcaatc 2185
>gb|AC152394.11| Mus musculus chromosome 15, clone RP23-100K19, complete sequence Length = 203260 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 tttaccaagtatttatttat 494 |||||||||||||||||||| Sbjct: 103411 tttaccaagtatttatttat 103430
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gtctgaacttcgattttctg 302 |||||||||||||||||||| Sbjct: 4627942 gtctgaacttcgattttctg 4627961
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 28271554 cggacgccgccgccgccggc 28271573 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 5183598 gacgccgccgccgccggcca 5183617
>gb|AY728477.1| Zea mays chalcone synthase C2-Idf-III (c2) gene, c2-Idf allele, complete cds Length = 22981 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 2043 gacgccgccgccgccggcca 2062
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ggacgccgccgccgccggccatgt 156 |||||||||||| ||||||||||| Sbjct: 59858 ggacgccgccgcggccggccatgt 59881
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 7000 gacgccgccgccgccggcca 7019
>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3 Contains part of the gene for HBxAg transactivated protein 2 (XTP2), complete sequence Length = 99886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atgatgttgctttctctcta 446 |||||||||||||||||||| Sbjct: 20512 atgatgttgctttctctcta 20531
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 137054 cggacgccgccgccgccggc 137073
>ref|XM_788192.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA topoisomerase I (LOC588512), mRNA Length = 3316 Score = 40.1 bits (20), Expect = 7.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 379 agtatcatg-acaagtttggtgataaagagat 409 ||||||||| ||||||||| |||||||||||| Sbjct: 2968 agtatcatgtacaagtttgatgataaagagat 2937
>emb|BX050423.1|CNS09B2J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC26DF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 937 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ttcgatcggacgccgccgccgccg 149 ||||| |||||||||||||||||| Sbjct: 902 ttcgagcggacgccgccgccgccg 879
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 39488 cggacgccgccgccgccggc 39469
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ccaaagtgtgcatatcaatc 536 |||||||||||||||||||| Sbjct: 181078 ccaaagtgtgcatatcaatc 181059
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cggtggggctgggggtgctc 191 |||||||||||||||||||| Sbjct: 276725 cggtggggctgggggtgctc 276706
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 86428 cgccgccgccgccggccatg 86447
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 119073 atcggacgccgccgccgccg 119092
>emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in linkage group 4 Contains the gene for a novel protein similar to vertebrate calcium channel voltage-dependent alpha 2/delta subunit 1 (CACNA2D1) and a CpG island, complete sequence Length = 172228 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 tttaccaagtatttatttat 494 |||||||||||||||||||| Sbjct: 104881 tttaccaagtatttatttat 104900
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 cgatcggacgccgccgccgccggc 151 ||||||| |||||||||||||||| Sbjct: 1647400 cgatcggtcgccgccgccgccggc 1647377
>dbj|AK095231.1| Homo sapiens cDNA FLJ37912 fis, clone CTONG1000056 Length = 3770 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 atgatgttgctttctctcta 446 |||||||||||||||||||| Sbjct: 705 atgatgttgctttctctcta 724
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 tcggtggggctgggggtgctctac 194 ||||||||||||||| |||||||| Sbjct: 3644497 tcggtggggctggggctgctctac 3644474
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 83920 cggacgccgccgccgccggc 83901
>gb|AC106760.2| Homo sapiens chromosome 5 clone RP11-215G15, complete sequence Length = 78190 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 aagtgtgcatatcaatcacc 539 |||||||||||||||||||| Sbjct: 20346 aagtgtgcatatcaatcacc 20327
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 72920 gacgccgccgccgccggcca 72901
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 37353 cgccgccgccgccggccatg 37372
>gb|AC154023.4| Mus musculus 6 BAC RP24-345N6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 124075 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 aagcactcttcccacctcat 337 |||||||||||||||||||| Sbjct: 81488 aagcactcttcccacctcat 81507
>gb|AC008539.6| Homo sapiens chromosome 5 clone CTC-493L21, complete sequence Length = 138633 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 cctgttgccgcaaatgatgt 433 |||||||||||||||||||| Sbjct: 19157 cctgttgccgcaaatgatgt 19138
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene, complete cds Length = 278572 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 agccccttcattcagaaaca 379 |||||||||||||||||||| Sbjct: 53406 agccccttcattcagaaaca 53387
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ggacgccgccgccgccggccatgt 156 |||||||||||| ||||||||||| Sbjct: 11738402 ggacgccgccgcggccggccatgt 11738425 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 1006709 cgccgccgccgccggccatg 1006728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgccgccggccatgtcg 158 |||||||||||||||||||| Sbjct: 17504602 cgccgccgccggccatgtcg 17504621 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 3798549 atcggacgccgccgccgccg 3798568
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 21591856 gacgccgccgccgccggcca 21591837
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 29956656 cgccgccgccgccggccatg 29956675 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggccatg 155 |||||||||||||||||| ||||| Sbjct: 7236237 cggacgccgccgccgccgcccatg 7236214 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccggccatgtcgtcgtcgt 165 |||||||||||||||||||| Sbjct: 4970957 gccggccatgtcgtcgtcgt 4970976 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccggccatgtcgtcgtcgt 165 |||||||||||||||||||| Sbjct: 4955845 gccggccatgtcgtcgtcgt 4955864
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cgccgccggccatgtcgtcgtcgt 165 |||||||||||||| ||||||||| Sbjct: 5904219 cgccgccggccatggcgtcgtcgt 5904242
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 28362878 cggacgccgccgccgccggc 28362897 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 5182813 gacgccgccgccgccggcca 5182832
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 20986272 cgccgccgccgccggccatg 20986253
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgatcggacgccgccgccgc 147 |||||||||||||||||||| Sbjct: 2615564 cgatcggacgccgccgccgc 2615583
>dbj|AP004360.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1166B08 Length = 147667 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 63744 cgccgccgccgccggccatg 63763
>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence Length = 157544 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctgttgccgcaaatgatg 432 |||||||||||||||||||| Sbjct: 26435 tcctgttgccgcaaatgatg 26416
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 2689 atcggacgccgccgccgccg 2708
>dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1 gene for CLV1-like LRR receptor kinase, complete cds Length = 4500 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 2003 cgccgccgccgccggccatg 1984
>dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1 mRNA for CLV1-like LRR receptor kinase, complete cds Length = 3169 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 1917 cgccgccgccgccggccatg 1898
>gb|AC010361.3|AC010361 Homo sapiens chromosome 5 clone CTD-2035K4, complete sequence Length = 141674 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 cctgttgccgcaaatgatgt 433 |||||||||||||||||||| Sbjct: 139003 cctgttgccgcaaatgatgt 138984
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 32804 cgccgccgccgccggccatg 32823
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 11114 cggacgccgccgccgccggc 11095
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 152169 cgccgccgccgccggccatg 152188
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 140072 cggacgccgccgccgccggc 140053
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggccatg 155 |||||||||||||||||| ||||| Sbjct: 113648 cggacgccgccgccgccgcccatg 113625
>emb|BX649357.5| Mouse DNA sequence from clone RP23-364J19 on chromosome 2, complete sequence Length = 41488 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 atgattcctgttgccgcaaatgat 431 |||||||||| ||||||||||||| Sbjct: 21816 atgattcctgctgccgcaaatgat 21839
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cggacgccgccgccgccggccatg 155 |||||||||||||||||| ||||| Sbjct: 71241 cggacgccgccgccgccgcccatg 71218
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccggccatgtcgtcgtcgt 165 |||||||||||||||||||| Sbjct: 13071 gccggccatgtcgtcgtcgt 13090
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccggccatgtcgtcgtcgt 165 |||||||||||||||||||| Sbjct: 158440 gccggccatgtcgtcgtcgt 158459 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccggccatgtcgtcgtcgt 165 |||||||||||||||||||| Sbjct: 143328 gccggccatgtcgtcgtcgt 143347
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 98614 cgccgccgccgccggccatg 98595
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 109744 cgccgccgccgccggccatg 109725
>dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17, map 22, complete sequences Length = 127718 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 gacatcttttaccctttacc 480 |||||||||||||||||||| Sbjct: 57944 gacatcttttaccctttacc 57925
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 52030 gacgccgccgccgccggcca 52011
>dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A06, full insert sequence Length = 3170 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 1917 cgccgccgccgccggccatg 1898
>dbj|AK111139.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-D12, full insert sequence Length = 956 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 737 cgccgccgccgccggccatg 718
>dbj|AK110224.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-E05, full insert sequence Length = 3184 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 2325 cgccgccgccgccggccatg 2306
>dbj|AK107523.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F11, full insert sequence Length = 1784 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 84 cgccgccgccgccggccatg 65
>dbj|AK069890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038J09, full insert sequence Length = 2126 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gacgccgccgccgccggcca 153 |||||||||||||||||||| Sbjct: 1205 gacgccgccgccgccggcca 1224
>dbj|AK068009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H13, full insert sequence Length = 1112 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ggacgccgccgccgccggccatgt 156 |||||||||||| ||||||||||| Sbjct: 106 ggacgccgccgcggccggccatgt 83
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gccgccgccggccatgtcgt 159 |||||||||||||||||||| Sbjct: 132428 gccgccgccggccatgtcgt 132447
>dbj|AB092484.1| Oryza sativa (japonica cultivar-group) OsGA2ox2 gene for putative gibberellin 2-oxidase, complete cds Length = 12256 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cggacgccgccgccgccggc 151 |||||||||||||||||||| Sbjct: 10960 cggacgccgccgccgccggc 10979
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgccgccgccggccatgtcg 158 |||||||||||||||||||| Sbjct: 17598312 cgccgccgccggccatgtcg 17598331 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcggacgccgccgccgccg 149 |||||||||||||||||||| Sbjct: 3807243 atcggacgccgccgccgccg 3807262
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgccgccgccgccggccatg 155 |||||||||||||||||||| Sbjct: 67984 cgccgccgccgccggccatg 68003
>emb|AL807243.9| Mouse DNA sequence from clone RP23-25D17 on chromosome 4, complete sequence Length = 118119 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 agccccttcattcagaaaca 379 |||||||||||||||||||| Sbjct: 116599 agccccttcattcagaaaca 116618
>emb|AL833806.7| Mouse DNA sequence from clone RP23-425H11 on chromosome 4, complete sequence Length = 55805 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 agccccttcattcagaaaca 379 |||||||||||||||||||| Sbjct: 480 agccccttcattcagaaaca 499 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,607,139 Number of Sequences: 3902068 Number of extensions: 6607139 Number of successful extensions: 254867 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 240842 Number of HSP's gapped (non-prelim): 14019 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
