ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart28a08 |
|---|---|
| Clone Library Name | barley_pub |
>STML2_MOUSE (Q99JB2) Stomatin-like protein 2 (SLP-2)| Length = 353 Score = 142 bits (359), Expect = 4e-34 Identities = 69/125 (55%), Positives = 97/125 (77%) Frame = +3 Query: 150 ARDEVSRFDALSTPVNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSL 329 A V R + P N + VP+++A+V+ER G++ + L+ G++ L+P++DRI YV SL Sbjct: 20 ASGRVPRRASSGLPRNTVILFVPQQEAWVVERMGRFHRILEPGLNVLIPVLDRIRYVQSL 79 Query: 330 KEEAIPIPDQSAITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELG 509 KE I +P+QSA+T DNV +QIDGVLY++I+DPY+ASYGVE+P +AV QLAQTTMRSELG Sbjct: 80 KEIVINVPEQSAVTLDNVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELG 139 Query: 510 KITLD 524 K++LD Sbjct: 140 KLSLD 144
>STML2_HUMAN (Q9UJZ1) Stomatin-like protein 2 (SLP-2) (EPB72-like 2)| Length = 356 Score = 141 bits (356), Expect = 9e-34 Identities = 67/112 (59%), Positives = 93/112 (83%) Frame = +3 Query: 189 PVNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAI 368 P N V VP+++A+V+ER G++ + L+ G++ L+P++DRI YV SLKE I +P+QSA+ Sbjct: 33 PRNTVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAV 92 Query: 369 TKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 T DNV +QIDGVLY++I+DPY+ASYGVE+P +AV QLAQTTMRSELGK++LD Sbjct: 93 TLDNVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLD 144
>Y1128_SYNY3 (P72655) Hypothetical protein slr1128| Length = 321 Score = 98.6 bits (244), Expect = 9e-21 Identities = 49/111 (44%), Positives = 71/111 (63%) Frame = +3 Query: 192 VNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAIT 371 + V IV EK +++ER G Y K L G++ VP++DR+ + + +E+ I IP QS IT Sbjct: 16 IGTSVKIVNEKNEYLVERLGSYNKKLTPGLNFTVPILDRVVFKQTTREKVIDIPPQSCIT 75 Query: 372 KDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 KDNV I D V+Y +I+D +A Y VEN A++ L T +RSE+GK+ LD Sbjct: 76 KDNVAITADAVVYWRIIDMEKAYYKVENLQSAMVNLVLTQIRSEIGKLELD 126
>YBBK_SHIFL (P0AA56) Hypothetical protein ybbK| Length = 305 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/111 (41%), Positives = 69/111 (62%) Frame = +3 Query: 192 VNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAIT 371 V GV IVP+ + +ERFG+Y KTL G+ +VP +DRI ++ E+ + IP Q I+ Sbjct: 16 VGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVIS 75 Query: 372 KDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 KDN + ID V +++++D RA+Y V N A+I L T +R+ LG + LD Sbjct: 76 KDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELD 126
>YBBK_ECOLI (P0AA53) Hypothetical protein ybbK| Length = 305 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/111 (41%), Positives = 69/111 (62%) Frame = +3 Query: 192 VNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAIT 371 V GV IVP+ + +ERFG+Y KTL G+ +VP +DRI ++ E+ + IP Q I+ Sbjct: 16 VGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVIS 75 Query: 372 KDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 KDN + ID V +++++D RA+Y V N A+I L T +R+ LG + LD Sbjct: 76 KDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELD 126
>YBBK_ECOL6 (P0AA54) Hypothetical protein ybbK| Length = 305 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/111 (41%), Positives = 69/111 (62%) Frame = +3 Query: 192 VNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAIT 371 V GV IVP+ + +ERFG+Y KTL G+ +VP +DRI ++ E+ + IP Q I+ Sbjct: 16 VGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVIS 75 Query: 372 KDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 KDN + ID V +++++D RA+Y V N A+I L T +R+ LG + LD Sbjct: 76 KDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELD 126
>YBBK_ECO57 (P0AA55) Hypothetical protein ybbK| Length = 305 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/111 (41%), Positives = 69/111 (62%) Frame = +3 Query: 192 VNWGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAIT 371 V GV IVP+ + +ERFG+Y KTL G+ +VP +DRI ++ E+ + IP Q I+ Sbjct: 16 VGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVIS 75 Query: 372 KDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 KDN + ID V +++++D RA+Y V N A+I L T +R+ LG + LD Sbjct: 76 KDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELD 126
>Y1524_MYCBO (P63694) Hypothetical protein Mb1524| Length = 381 Score = 84.7 bits (208), Expect = 1e-16 Identities = 41/107 (38%), Positives = 66/107 (61%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNV 383 V+++P+ +A VIER G+Y +T+ + LVP +DR+ L+E + P Q IT+DN+ Sbjct: 26 VALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVITEDNL 85 Query: 384 VIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 + ID V+Y ++ P A Y + N I V QL TT+R+ +G +TL+ Sbjct: 86 TLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLE 132
>Y1488_MYCTU (P63693) Hypothetical protein Rv1488/MT1533.2| Length = 381 Score = 84.7 bits (208), Expect = 1e-16 Identities = 41/107 (38%), Positives = 66/107 (61%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNV 383 V+++P+ +A VIER G+Y +T+ + LVP +DR+ L+E + P Q IT+DN+ Sbjct: 26 VALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVITEDNL 85 Query: 384 VIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 + ID V+Y ++ P A Y + N I V QL TT+R+ +G +TL+ Sbjct: 86 TLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLE 132
>Y692_METTH (O26788) Hypothetical protein MTH692| Length = 318 Score = 84.0 bits (206), Expect = 2e-16 Identities = 38/97 (39%), Positives = 66/97 (68%) Frame = +3 Query: 234 VIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNVVIQIDGVLYV 413 V+ER GKY +T++SG+ ++P ++ I V ++E+ + +P Q ITKDN V+ +D V++ Sbjct: 29 VVERLGKYQRTVESGLVVIIPFIEAIKKV-DMREQVVDVPPQEVITKDNTVVVVDCVIFY 87 Query: 414 KIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 ++VDP+ A Y V + A+ +LAQT +R+ +G + LD Sbjct: 88 EVVDPFNAVYNVVDFYQAITKLAQTNLRNIIGDLELD 124
>Y1511_PYRHO (O59180) Hypothetical protein PH1511| Length = 266 Score = 75.9 bits (185), Expect = 6e-14 Identities = 38/107 (35%), Positives = 67/107 (62%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNV 383 + IV E + VI R G+ + G+ ++P+ ++ A + L+ + + +P Q ITKDNV Sbjct: 25 IKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNV 83 Query: 384 VIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 ++++ V+Y ++VDP +A V+N I A Q++QTT+RS +G+ LD Sbjct: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
>Y658_PYRAB (Q9V0Y1) Hypothetical protein PYRAB06580| Length = 268 Score = 75.9 bits (185), Expect = 6e-14 Identities = 38/107 (35%), Positives = 67/107 (62%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNV 383 + IV E + VI R G+ + G+ ++P+ ++ A + L+ + + +P Q ITKDNV Sbjct: 25 IKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNV 83 Query: 384 VIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 ++++ V+Y ++VDP +A V+N I A Q++QTT+RS +G+ LD Sbjct: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
>Y1420_ARCFU (O28852) Hypothetical protein AF1420| Length = 249 Score = 71.6 bits (174), Expect = 1e-12 Identities = 38/107 (35%), Positives = 64/107 (59%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNV 383 V IV E + VI R G+ + G+ ++P+++ + V L+ +P Q +TKDNV Sbjct: 20 VRIVKEYERGVIFRLGRLVGARGPGLFFIIPILENMVVV-DLRTVTYDVPSQEVVTKDNV 78 Query: 384 VIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 ++++ V+Y ++VDP +A V + +A QLAQTT+RS +G+ LD Sbjct: 79 TVKVNAVVYYRVVDPAKAVTEVFDYQYATAQLAQTTLRSIIGQAELD 125
>Y827_METJA (Q58237) Hypothetical protein MJ0827| Length = 199 Score = 71.6 bits (174), Expect = 1e-12 Identities = 38/107 (35%), Positives = 65/107 (60%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNV 383 + IV + + +I R G+ + L GI+ ++P +D V ++ IP Q ITKDN Sbjct: 25 IVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKV-DMRTRVTDIPPQEMITKDNA 83 Query: 384 VIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 V+++D V+Y +++D +A VE+ +A+I LAQTT+R+ +G + LD Sbjct: 84 VVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTLRAIIGSMELD 130
>STO1_CAEEL (Q19200) Stomatin-1| Length = 330 Score = 60.5 bits (145), Expect = 3e-09 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLKTLDS-GIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDN 380 + IV E + V+ R G+ + + GI ++P +D + L+ + +P Q +++D+ Sbjct: 64 IKIVQEYQRAVVFRLGRLVPDVKGPGIFFIIPCIDTFLNI-DLRVASYNVPSQEILSRDS 122 Query: 381 VVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 V + +D V+Y K+ DP + GV N + LAQTT+R+ LG TL Sbjct: 123 VTVSVDAVVYFKVFDPITSVVGVGNATDSTKLLAQTTLRTILGTHTL 169
>YR614_MIMIV (Q5UP73) Hypothetical band 7 family protein R614| Length = 303 Score = 57.8 bits (138), Expect = 2e-08 Identities = 25/97 (25%), Positives = 61/97 (62%) Frame = +3 Query: 234 VIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNVVIQIDGVLYV 413 V++ FG+ + ++ G+H + P+ + I+ V ++ + I + + +T D + I+ID V+Y Sbjct: 79 VVQEFGRVKREINDGMHYVNPVTESISQV-DMRIKVIDLDKKDVMTSDKLSIKIDSVVYY 137 Query: 414 KIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 ++ + + A + ++N + ++I+L+ T+R+ +G TL+ Sbjct: 138 QVTNIHDALFKIDNVVQSIIELSYATLRNVIGNSTLE 174
>UNC1_CAEEL (Q21190) Uncoordinated protein 1 (Protein unc-1)| Length = 285 Score = 55.1 bits (131), Expect = 1e-07 Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYL--KTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + ++ E + VI R G+ + G+ ++P +D + L+ + +P Q ++KD Sbjct: 55 LKVIKEYERVVIFRIGRLVFGGARGPGMIFIIPCIDTYRKI-DLRVVSYAVPPQEILSKD 113 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +V + +D V+Y + DP + V++ I++ LAQTT+R+ LG TL Sbjct: 114 SVTVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTTLRNALGMKTL 161
>STOM_MOUSE (P54116) Erythrocyte band 7 integral membrane protein (Stomatin)| (Protein 7.2b) Length = 284 Score = 55.1 bits (131), Expect = 1e-07 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLK--TLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + IV E + +I R G+ L+ G+ ++P D V ++ + IP Q +TKD Sbjct: 54 IKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCTDSFIKV-DMRTISFDIPPQEVLTKD 112 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELG 509 +V I +DGV+Y ++ + A + N A LAQTT+R+ LG Sbjct: 113 SVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNALG 156
>STOM_HUMAN (P27105) Erythrocyte band 7 integral membrane protein (Stomatin)| (Protein 7.2b) Length = 287 Score = 53.9 bits (128), Expect = 3e-07 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Frame = +3 Query: 171 FDALSTPVN-WG-VSIVPEKKAFVIERFGKYLK--TLDSGIHGLVPLVDRIAYVHSLKEE 338 F ++ P++ W + I+ E + +I R G+ L+ G+ ++P D V ++ Sbjct: 40 FTVITFPISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKV-DMRTI 98 Query: 339 AIPIPDQSAITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELG 509 + IP Q +TKD+V I +DGV+Y ++ + A + N A LAQTT+R+ LG Sbjct: 99 SFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLG 155
>STML3_MOUSE (Q6PE84) Stomatin-like protein 3 (Stomatin-related olfactory| protein) Length = 287 Score = 52.4 bits (124), Expect = 8e-07 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYL--KTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + I+ E + V+ R G+ K G+ ++P +D V L+ IP Q +T+D Sbjct: 47 LKIIKEYERAVVFRLGRIQADKAKGPGLILVLPCIDVFVKV-DLRTVTCNIPPQEILTRD 105 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +V Q+DGV+Y +I A V + A LAQTT+R+ LG TL Sbjct: 106 SVTTQVDGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGTQTL 153
>STML3_HUMAN (Q8TAV4) Stomatin-like protein 3| Length = 291 Score = 52.4 bits (124), Expect = 8e-07 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYL--KTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + I+ E + V+ R G+ K G+ ++P +D V L+ IP Q +T+D Sbjct: 51 LKIIKEYERAVVFRLGRIQADKAKGPGLILVLPCIDVFVKV-DLRTVTCNIPPQEILTRD 109 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +V Q+DGV+Y +I A V + A LAQTT+R+ LG TL Sbjct: 110 SVTTQVDGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGTQTL 157
>MEC2_CAEEL (Q27433) Mechanosensory protein 2| Length = 481 Score = 50.8 bits (120), Expect = 2e-06 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLK--TLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + +V E + VI R G+ + GI +VP +D V L+ + +P Q ++KD Sbjct: 141 IKVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKV-DLRVLSFEVPPQEILSKD 199 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +V + +D V+Y +I + + VE+ + LAQTT+R+ LG TL Sbjct: 200 SVTVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGTKTL 247
>HFLK_BORBU (O51221) Protein hflK| Length = 311 Score = 50.1 bits (118), Expect = 4e-06 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 16/118 (13%) Frame = +3 Query: 216 PEKKAFVIERFGKYLKTLDSGIHGLVPLVDR-----IAYVHSLKEEAIPIP--------- 353 P ++A V+ R GK +TLDSGIH +PL++ + V +K + P Sbjct: 37 PSEEAIVL-RLGKLNRTLDSGIHVKIPLIEEKFIVPVKIVQEIKFGFLISPSDIRENDNA 95 Query: 354 --DQSAITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 + IT D +I I+ ++ KI DPY + VE+P + +A+++M +G T+ Sbjct: 96 NDESRIITGDLNIINIEWLVQYKIRDPYSFKFKVEDPETTIKDIAKSSMNRLIGDNTI 153
>STO2_CAEEL (Q19958) Stomatin-2| Length = 314 Score = 49.3 bits (116), Expect = 6e-06 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYLK--TLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + +V E + VI R G+ + GI ++P ++ V L+ + +P Q +TKD Sbjct: 93 MKVVQEYERAVIFRLGRLIGGGAKGPGIFFVLPCIESYTKV-DLRTVSFSVPPQEILTKD 151 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +V +D V+Y +I + + VEN + LAQTT+R+ LG +L Sbjct: 152 SVTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNMLGTRSL 199
>STO4_CAEEL (Q22165) Stomatin-4| Length = 281 Score = 49.3 bits (116), Expect = 6e-06 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFG--KYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + +V E + VI R G K+ GI ++P ++ + L+ + +P Q ++KD Sbjct: 50 LKVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKI-DLRVVSFDVPPQEILSKD 108 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +V + +D V+Y +I + + VE+ + LAQTT+R+ LG TL Sbjct: 109 SVTVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTTLRNFLGTRTL 156
>STO3_CAEEL (Q20657) Stomatin-3| Length = 267 Score = 47.0 bits (110), Expect = 3e-05 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 4/121 (3%) Frame = +3 Query: 171 FDALSTPVN--WGVSIVPEKKAFVIERFGKYLKT--LDSGIHGLVPLVDRIAYVHSLKEE 338 F L+ PV+ + V IV E VI R G+ + GI ++P +D V L+ Sbjct: 26 FLLLTFPVSIFFCVKIVKEYDRMVIFRLGRLWQDNPRGPGIVLVLPFIDSHKTV-DLRVM 84 Query: 339 AIPIPDQSAITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKIT 518 + +P Q +T+D+V I +D +Y + DP + V + + QLAQ+++R+ LG + Sbjct: 85 SYDVPTQEMLTRDSVTIGVDAAVYYRTSDPIASLARVNDAHMSTRQLAQSSLRNVLGTRS 144 Query: 519 L 521 L Sbjct: 145 L 145
>HFLK_ECOLI (P0ABC7) Protein hflK| Length = 419 Score = 42.4 bits (98), Expect = 8e-04 Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Frame = +3 Query: 201 GVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRI--AYVHSLKEEAIPIPDQSAITK 374 G + E + V+ RFGK+ ++ G++ +D + V +++E A +T Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAA---SGVMLTS 152 Query: 375 DNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 D V++++ + ++ +P + Y V +P ++ Q + +R +GK T+D Sbjct: 153 DENVVRVEMNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMD 202
>HFLK_ECO57 (P0ABC8) Protein hflK| Length = 419 Score = 42.4 bits (98), Expect = 8e-04 Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Frame = +3 Query: 201 GVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRI--AYVHSLKEEAIPIPDQSAITK 374 G + E + V+ RFGK+ ++ G++ +D + V +++E A +T Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAA---SGVMLTS 152 Query: 375 DNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 D V++++ + ++ +P + Y V +P ++ Q + +R +GK T+D Sbjct: 153 DENVVRVEMNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMD 202
>HFLK_VIBCH (Q9KV09) Protein hflK| Length = 395 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 5/113 (4%) Frame = +3 Query: 201 GVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVH-----SLKEEAIPIPDQSA 365 G + E + V+ R GKY + +D G++ +D + V+ SL+ + Sbjct: 86 GFYTIGEAERGVVLRLGKYDRIVDPGLNWRPRFIDEVTPVNVQAIRSLRASGL------M 139 Query: 366 ITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 +TKD V+ + + +I DPY+ Y V N ++ Q + +R+ +G +D Sbjct: 140 LTKDENVVTVSMDVQYRIADPYKYLYRVTNADDSLRQATDSALRAVVGDSLMD 192
>HFLK_VIBPA (P40605) Protein hflK| Length = 400 Score = 39.7 bits (91), Expect = 0.005 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Frame = +3 Query: 201 GVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDR-----IAYVHSLKEEAIPIPDQSA 365 G + E + V+ R GKY + +D G++ +D + + SL+ + Sbjct: 89 GFYTIGEAERGVVLRLGKYDRIVDPGLNWRPRFIDEYEAVNVQAIRSLRASGL------M 142 Query: 366 ITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 +TKD V+ + + ++ DPY+ Y V N ++ Q + +R+ +G +D Sbjct: 143 LTKDENVVTVAMDVQYRVADPYKYLYRVTNADDSLRQATDSALRAVIGDSLMD 195
>HFLK_TREPA (O83151) Protein hflK| Length = 328 Score = 39.3 bits (90), Expect = 0.007 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 24/98 (24%) Frame = +3 Query: 234 VIERFGKYLKTLDSGIHGLVPLVDRI------------------------AYVHSLKEEA 341 V+ RFGKY +TL+ G+H L+P V+ + YV+++ E+ Sbjct: 43 VVTRFGKYHRTLEPGLHYLIPFVEWVYKVPVTKVQKEEFGFRTSKSSEQSHYVNNISHES 102 Query: 342 IPIPDQSAITKDNVVIQIDGVLYVKIVDPYRASYGVEN 455 + +T D ++ ++ V+ +IVDP + VE+ Sbjct: 103 L------MLTGDLNIVDVEWVVQYRIVDPRAWVFNVES 134
>PODO_RAT (Q8K4G9) Podocin| Length = 383 Score = 37.7 bits (86), Expect = 0.019 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYL--KTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + +V E + +I R G L + G+ +P +D V L+ + + IP +TKD Sbjct: 125 IKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTYHKV-DLRLQTLEIPFHEVVTKD 183 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +++ID V Y ++ + + + A+ L QTTM+ L +L Sbjct: 184 MFIMEIDAVCYYRMENASLLLSSLAHVSKAIQFLVQTTMKRLLAHRSL 231
>PODO_HUMAN (Q9NP85) Podocin| Length = 383 Score = 37.7 bits (86), Expect = 0.019 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYL--KTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 V +V E + +I R G L + G+ +P +D V L+ + + IP +TKD Sbjct: 125 VKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTYHKV-DLRLQTLEIPFHEIVTKD 183 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +++ID + Y ++ + + + AV L QTTM+ L +L Sbjct: 184 MFIMEIDAICYYRMENASLLLSSLAHVSKAVQFLVQTTMKRLLAHRSL 231
>PODO_MOUSE (Q91X05) Podocin| Length = 385 Score = 37.7 bits (86), Expect = 0.019 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +3 Query: 204 VSIVPEKKAFVIERFGKYL--KTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + +V E + +I R G L + G+ +P +D V L+ + + IP +TKD Sbjct: 127 IKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTYHKV-DLRLQTLEIPFHEVVTKD 185 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITL 521 +++ID V Y ++ + + + A+ L QTTM+ L +L Sbjct: 186 MFIMEIDAVCYYRMENASLLLSSLAHVSKAIQFLVQTTMKRLLAHRSL 233
>STML1_HUMAN (Q9UBI4) Stomatin-like protein 1 (SLP-1) (Stomatin-related protein)| (STORP) (EPB72-like 1) (UNC24 homolog) Length = 398 Score = 35.8 bits (81), Expect = 0.073 Identities = 26/105 (24%), Positives = 45/105 (42%) Frame = +3 Query: 198 WGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKD 377 + + IVP + ++ R G+ G+ L+P +D V L+ A +P +KD Sbjct: 77 FALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRV-DLRTRAFNVPPCKLASKD 135 Query: 378 NVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGK 512 V+ + + +I DP + V++ A AQ M L K Sbjct: 136 GAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK 180
>HFLK_BUCBP (Q89A39) Protein hflK| Length = 417 Score = 35.4 bits (80), Expect = 0.096 Identities = 23/108 (21%), Positives = 48/108 (44%) Frame = +3 Query: 201 GVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDN 380 G + E + V+ FGK+ + G+H L+ ++ + I + +T Sbjct: 87 GFYFIQESEYGVVTCFGKFSYLANPGLHWKPILIQKVIPIDVSTVREINTSG-TILTYSE 145 Query: 381 VVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSELGKITLD 524 +Q++ + +IVDP + + V NP + Q + +RS + + +D Sbjct: 146 HFVQVNMTVQYRIVDPKKYLFSVTNPDNCLRQSINSALRSVISRSNID 193
>STML1_MOUSE (Q8CI66) Stomatin-like protein 1 (SLP-1)| Length = 399 Score = 35.0 bits (79), Expect = 0.12 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 2/111 (1%) Frame = +3 Query: 180 LSTPVN--WGVSIVPEKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIP 353 L+ P++ + + IVP + ++ R G+ G+ L+P +D V L+ A +P Sbjct: 69 LTFPISGWFALKIVPTYERMIVFRLGRIRNPQGPGMVLLLPFIDSFQRV-DLRTRAFNVP 127 Query: 354 DQSAITKDNVVIQIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTTMRSEL 506 +KD V+ + + +I DP + V++ A A M L Sbjct: 128 PCKLASKDGAVLSVGADVQFRIWDPVLSVMAVKDLNTATRMTAHNAMTKAL 178
>COBQ_VIBVU (Q8D737) Cobyric acid synthase| Length = 483 Score = 31.2 bits (69), Expect = 1.8 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Frame = +3 Query: 225 KAFVIERFGKYLKTLDSGIHGL-----VPLVDRIAYVHSLKEEAIPIPDQSAITKDNVVI 389 K FVI RF +K L+SG+ L P++ + ++H L EA + AIT Sbjct: 194 KGFVINRFRGDIKLLESGLDWLEEKTGKPVIGVLPFLHGLNLEA-----EDAITSQQ--- 245 Query: 390 QIDGVLYVKIVDP 428 ++ G + +K+V P Sbjct: 246 ELSGEVKLKVVVP 258
>Y1436_AQUAE (O67427) Hypothetical protein aq_1436 precursor| Length = 276 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = +3 Query: 270 DSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNVVIQI-----DGVLYVKIVDPYR 434 D GI G++P +++L + + + AI + +I+I +G LY+K+ + Sbjct: 158 DCGIKGIIPNASVAKEINTLDKGTVTLQTGDAIIRVPKIIKIYCSETNGELYLKVSEQEA 217 Query: 435 ASYGVENPIFAVIQLAQTTM 494 VE+P+ V ++ T + Sbjct: 218 NKAPVESPLVPVKEMEATLL 237
>HFLC_VIBPA (P40606) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 29.6 bits (65), Expect = 5.3 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 12/112 (10%) Frame = +3 Query: 210 IVPEKKAFVIERFGKYLK-------TLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAI 368 ++PE + ++ RFG+ LK + G+H +PL DR+ + + + D+ + Sbjct: 22 VIPEGERGIVVRFGRVLKDNNDITRIYEPGLHFKMPLFDRVKQLDARIQTMDGRADR-FV 80 Query: 369 TKDNVVIQIDGVLYVKIVD--PYRASYGVENPIFAVIQLAQ---TTMRSELG 509 T + + ID + +I D Y + G N + A L + +RSE+G Sbjct: 81 TSEKKDVIIDSYVKWRIEDFGRYYLATGGGNSLTAEALLERKVTDVLRSEIG 132
>RS3_METMP (Q6LXE7) 30S ribosomal protein S3P| Length = 211 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 165 SRFDALSTPVNWGVSIVPEKKAFVIERFGKYLKTL 269 S D TP+ +++ EK FVI R GK +K L Sbjct: 30 SHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKEL 64
>AGLU_ASPOR (Q12558) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) (AGL)| Length = 985 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = +3 Query: 219 EKKAFVIERFGKYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNVVIQ-I 395 ++ F E K+L L +G VP+VD Y+ + + + KD+V I+ Sbjct: 386 DQHRFSYEEGEKFLNKLHAGGRRWVPIVDGALYIPNPENASDAYETYDRGAKDDVFIKNP 445 Query: 396 DGVLYVKIVDP 428 DG LY+ V P Sbjct: 446 DGSLYIGAVWP 456
>Y5804_STRCO (O69980) UPF0168 protein SCO5804| Length = 182 Score = 28.9 bits (63), Expect = 9.0 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 9/104 (8%) Frame = +3 Query: 207 SIVPEKKAFVIERFG--KYLKTLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAITKDN 380 S++ K++ V E F K + + G D +A + EEA+ + +T + Sbjct: 45 SLMVVKRSGVTEPFSRTKVINGVRKACQGRPVTEDALAQLGQRVEEAVRATGSAELTTHD 104 Query: 381 VVI-------QIDGVLYVKIVDPYRASYGVENPIFAVIQLAQTT 491 V + ++D V Y++ YRA +E+ A+ +L +TT Sbjct: 105 VGLAILGPLQELDLVAYLRFASVYRAFDSLEDFEAAIAELRETT 148
>HFLC_VIBCH (Q9KV08) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 28.9 bits (63), Expect = 9.0 Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 12/112 (10%) Frame = +3 Query: 210 IVPEKKAFVIERFGKYLK-------TLDSGIHGLVPLVDRIAYVHSLKEEAIPIPDQSAI 368 ++PE + ++ RFG+ LK + G+H +PL DR+ + + + + + + Sbjct: 22 VIPEGERGIVIRFGRVLKDNNDLARIYEPGLHFKMPLFDRVKTLDA-RIQTMDGRSDRFV 80 Query: 369 TKDNVVIQIDGVLYVKIVD--PYRASYGVENPIFAVIQLAQ---TTMRSELG 509 T + + ID + +I D Y + G N + A L + +RSE+G Sbjct: 81 TSEKKDVIIDTYVKWRIEDFGQYYLATGGGNALTAEALLERKVTDVLRSEIG 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,459,204 Number of Sequences: 219361 Number of extensions: 1094503 Number of successful extensions: 3826 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3758 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3819 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
