ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27h03 |
|---|---|
| Clone Library Name | barley_pub |
>ABIL1_ORYSA (Q9AXA6) Probable protein ABIL1 (Abl interactor-like protein 1)| Length = 306 Score = 270 bits (689), Expect = 3e-72 Identities = 134/147 (91%), Positives = 138/147 (93%) Frame = +2 Query: 122 PAPATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAV 301 PAP T DEASMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQK +VLDNLKDYAV Sbjct: 28 PAPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAV 87 Query: 302 RALVNAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMI 481 RALVNAVDHLGTVAYKLTDLYEQQ SEVST+ELKVA LNQQVLTCQTYTDKEG+RQQQM Sbjct: 88 RALVNAVDHLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMT 147 Query: 482 GNATRHHKHYIVPTAGNKRMQAFSEMQ 562 G ATRHHKHYIVPT NKRMQAFSEMQ Sbjct: 148 GTATRHHKHYIVPTLANKRMQAFSEMQ 174
>ABIL4_ORYSA (Q6I588) Probable protein ABIL4 (Abl interactor-like protein 4)| Length = 302 Score = 233 bits (595), Expect = 2e-61 Identities = 119/155 (76%), Positives = 133/155 (85%), Gaps = 2/155 (1%) Frame = +2 Query: 89 PSWVAGSDA--ARPAPATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQ 262 PS AG A A P T DEASMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQ Sbjct: 6 PSPAAGGWAGVAGVGPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQ 65 Query: 263 KHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQT 442 K +VL+NLKDYAVRA+VNAVDHLGTVAYKLTDL+EQQ SEVSTVELKVA LNQQ+LTCQ Sbjct: 66 KQMVLENLKDYAVRAVVNAVDHLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQI 125 Query: 443 YTDKEGLRQQQMIGNATRHHKHYIVPTAGNKRMQA 547 +TD+ GLRQQ++ G +HHKHYI+P+ G+KR QA Sbjct: 126 FTDRAGLRQQKIGGTTFKHHKHYILPSTGHKRTQA 160
>ABIL1_ARATH (Q8S8M5) Protein ABIL1 (Abl interactor-like protein 1) (AtABIL1)| Length = 298 Score = 206 bits (525), Expect = 3e-53 Identities = 98/136 (72%), Positives = 119/136 (87%) Frame = +2 Query: 134 TFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALV 313 T DE SMER+KSFVKALQELKNLRPQLYSAA+YCEKSYLHSEQK +VLDNLKDY V+ALV Sbjct: 14 TLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDYTVKALV 73 Query: 314 NAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIGNAT 493 NAVDHLGTVA KLTDL++ Q S++ST+E++ + ++QQ+LTC+TY DKEGLRQQQ++ Sbjct: 74 NAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDKEGLRQQQLLAVIP 133 Query: 494 RHHKHYIVPTAGNKRM 541 HHKHYI+P + NKR+ Sbjct: 134 LHHKHYILPNSVNKRV 149
>ABIL3_ARATH (Q6NMC6) Protein ABIL3 (Abl interactor-like protein 3) (AtABIL3)| Length = 321 Score = 142 bits (357), Expect = 8e-34 Identities = 70/145 (48%), Positives = 99/145 (68%), Gaps = 3/145 (2%) Frame = +2 Query: 113 AARPAP---ATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDN 283 A P P + +DE SM++S F +L++LKNLR QLYSAAEY E SY + EQK IV++ Sbjct: 5 ATMPMPREASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVET 64 Query: 284 LKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGL 463 LKDYA++ALVN VDHLG+V YK+ D +++V EV+ EL+V+ + Q++ CQ Y D EG Sbjct: 65 LKDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMDHEGR 124 Query: 464 RQQQMIGNATRHHKHYIVPTAGNKR 538 QQ ++ + + HK Y +P+ KR Sbjct: 125 SQQSLVIDTPKFHKRYFLPSGEIKR 149
>ABIL2_ARATH (Q9M3A3) Protein ABIL2 (Abl interactor-like protein 2) (AtABIL2)| Length = 312 Score = 140 bits (352), Expect = 3e-33 Identities = 67/130 (51%), Positives = 92/130 (70%) Frame = +2 Query: 131 ATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRAL 310 + +DE SM++S F LQ+LKNLR QLYSAAEY E SY ++K IV++ LKDYAV+AL Sbjct: 8 SNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKAL 67 Query: 311 VNAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIGNA 490 VN VDHLG+V YK+ D +++V EVS EL+V+ + Q++ CQ Y D EG QQ ++ + Sbjct: 68 VNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHEGRSQQSLVIDT 127 Query: 491 TRHHKHYIVP 520 + HK YI+P Sbjct: 128 PKFHKRYILP 137
>ABIL2_ORYSA (Q5JKN2) Putative protein ABIL2 (Abl interactor-like protein 2)| Length = 323 Score = 123 bits (308), Expect = 4e-28 Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 3/156 (1%) Frame = +2 Query: 104 GSDAARPAPATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDN 283 G A + +T +E M+ + F +++LK L+ QLYSAAEY E +Y + K V++N Sbjct: 12 GVGIAGMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNN 71 Query: 284 LKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGL 463 LK+Y+V+ALVN VDHLG++++K++ L +Q+ EV L+V+ ++Q+ Q DKEGL Sbjct: 72 LKEYSVKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRVSCIHQRAQVSQACMDKEGL 131 Query: 464 RQQQMIGNATRHHKHYIVPTAGNKRMQA---FSEMQ 562 QQ ++ A ++HK YI+P A FSEM+ Sbjct: 132 SQQSLVITAPKYHKRYILPAGDGSMPNAVPNFSEMR 167
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 117 bits (293), Expect = 2e-26 Identities = 58/132 (43%), Positives = 89/132 (67%) Frame = +2 Query: 125 APATFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVR 304 A + D +S++ F +L++L+NLR QLYSAAEY E Y ++ QK V+ +LKDY V Sbjct: 21 ASTSEDMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVE 80 Query: 305 ALVNAVDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIG 484 ALV+ VDHLG V+YK+ +L +++ EV+ E +V+S+ Q+V CQ D+EG QQ ++ Sbjct: 81 ALVSTVDHLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQEGRSQQSLLI 140 Query: 485 NATRHHKHYIVP 520 A ++H+ YI+P Sbjct: 141 RAPKYHRRYILP 152
>ABIL4_ARATH (Q9FHY1) Protein ABIL4 (Abl interactor-like protein 4) (AtABIL4)| Length = 279 Score = 114 bits (284), Expect = 2e-25 Identities = 56/130 (43%), Positives = 79/130 (60%) Frame = +2 Query: 140 DEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNA 319 DE M+++ F + L++LKNLR QLYSAAEY E SY +E K V++ LK+YA +A+VN Sbjct: 18 DELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNT 77 Query: 320 VDHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIGNATRH 499 VDHLG+V+ K + ST L+++SL Q++ C+ Y K G Q ++ RH Sbjct: 78 VDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGKSGTHQHLLLFQYPRH 137 Query: 500 HKHYIVPTAG 529 HK Y P G Sbjct: 138 HKRYFFPQQG 147
>ABIL5_ORYSA (Q5JMF2) Probable protein ABIL5 (Abl interactor-like protein 5)| Length = 254 Score = 87.4 bits (215), Expect = 2e-17 Identities = 45/131 (34%), Positives = 81/131 (61%) Frame = +2 Query: 146 ASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVD 325 +S+ + F AL+ELK+LR QL+ A+ CEK++L +E+K ++L++ K Y A+V +D Sbjct: 30 SSLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVID 89 Query: 326 HLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIGNATRHHK 505 HLGTV+ KL ++++ E++ E K+ L Q++LTC+ Y L + +A ++H+ Sbjct: 90 HLGTVSSKLEQQLQEKI-EITQTEKKLNFLKQRLLTCEQYAITLKLLTVRGDNDAIQYHR 148 Query: 506 HYIVPTAGNKR 538 Y+ + G + Sbjct: 149 RYLSQSTGGTK 159
>ABI2_MOUSE (P62484) Abl interactor 2 (Abelson interactor 2) (Abi-2)| Length = 446 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Frame = +2 Query: 212 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVST 391 L A+YCE +Y+ S K L+ K Y ++L + + T+A + + + Q S++ Sbjct: 26 LERVADYCENNYIQSPDKQRALEETKAYTTQSLASVAYLINTLANNVLQMLDIQASQLRR 85 Query: 392 VELKVASLNQQVLTCQTYTDKEGLRQQQMI---GNATRHHK 505 +E +S+N T + +K R+ ++ N +R HK Sbjct: 86 ME---SSINHISQTVDIHKEKVARREIGILTTNKNTSRTHK 123
>ABI2_HUMAN (Q9NYB9) Abl interactor 2 (Abelson interactor 2) (Abi-2)| (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1) Length = 513 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Frame = +2 Query: 212 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVST 391 L A+YCE +Y+ S K L+ K Y ++L + + T+A + + + Q S++ Sbjct: 26 LERVADYCENNYIQSADKQRALEETKAYTTQSLASVAYLINTLANNVLQMLDIQASQLRR 85 Query: 392 VELKVASLNQQVLTCQTYTDKEGLRQQQMI---GNATRHHK 505 +E +S+N T + +K R+ ++ N +R HK Sbjct: 86 ME---SSINHISQTVDIHKEKVARREIGILTTNKNTSRTHK 123
>ABI1_RAT (Q9QZM5) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Eps8 SH3| domain-binding protein) (Eps8-binding protein) (e3B1) Length = 475 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +2 Query: 212 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVST 391 L A+YCE +Y+ + K L+ K Y ++L + + +A + L + Q S++ Sbjct: 25 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALANNVLQLLDIQASQLRR 84 Query: 392 VELKVASLNQQVLTCQTYTDKEGLRQQQMI---GNATRHHK 505 +E +S+N T + +K R+ ++ N +R HK Sbjct: 85 ME---SSINHISQTVDIHKEKVARREIGILTTNKNTSRTHK 122
>ABI1_HUMAN (Q8IZP0) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Nap1-binding protein) (Nap1BP) (Abl-binding protein 4) (AblBP4) Length = 507 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +2 Query: 212 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVST 391 L A+YCE +Y+ + K L+ K Y ++L + + +A + L + Q S++ Sbjct: 25 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALANNVLQLLDIQASQLRR 84 Query: 392 VELKVASLNQQVLTCQTYTDKEGLRQQQMI---GNATRHHK 505 +E +S+N T + +K R+ ++ N +R HK Sbjct: 85 ME---SSINHISQTVDIHKEKVARREIGILTTNKNTSRTHK 122
>ABI1_MOUSE (Q8CBW3) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Ablphilin-1) Length = 480 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +2 Query: 212 LYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVST 391 L A+YCE +Y+ + K L+ K Y ++L + + +A + L + Q S++ Sbjct: 25 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALANNVLQLLDIQASQLRR 84 Query: 392 VELKVASLNQQVLTCQTYTDKEGLRQQQMI---GNATRHHK 505 +E +S+N T + +K R+ ++ N +R HK Sbjct: 85 ME---SSINHISQTVDIHKEKVARREIGILTTNKNTSRTHK 122
>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 367 Score = 38.9 bits (89), Expect = 0.010 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +2 Query: 185 QELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLY 364 + L+ L A YCE +YL + K L+ + +AL + +G +A + Sbjct: 20 EALRGNHSALLRVANYCEDNYLQATDKRKALEETMAFTTQALASVAYQVGNLAGHTLRML 79 Query: 365 EQQVSEVSTVELKVASLNQQV 427 + Q + + VE K+++L Q V Sbjct: 80 DLQGAALRQVEAKMSTLGQMV 100
>ABI3_HUMAN (Q9P2A4) ABI gene family member 3 (New molecule including SH3)| (Nesh) Length = 366 Score = 38.5 bits (88), Expect = 0.013 Identities = 20/81 (24%), Positives = 39/81 (48%) Frame = +2 Query: 185 QELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDLY 364 + L+ L A+YCE +Y+ + K L+ + +AL + +G +A + Sbjct: 17 EALRGNHSALLRVADYCEDNYVQATDKRKALEETMAFTTQALASVAYQVGNLAGHTLRML 76 Query: 365 EQQVSEVSTVELKVASLNQQV 427 + Q + + VE +V++L Q V Sbjct: 77 DLQGAALRQVEARVSTLGQMV 97
>HAP1_RAT (P54256) Huntingtin-associated protein 1 (HAP-1)| Length = 629 Score = 36.6 bits (83), Expect = 0.050 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 10/114 (8%) Frame = +2 Query: 188 ELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDL-- 361 +L+ L+ +L E E +L E H LDNL+D ++ V+ + ++ +L Sbjct: 267 QLEALKQKLKLLEE--ENDHLREEASH--LDNLEDKEQMLILECVEQFSEASQQMAELSE 322 Query: 362 --------YEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIGNATRH 499 YE+Q E++ ++ ++ L Q+ CQ+Y + QQQ+ H Sbjct: 323 VLVLRLEGYERQQKEITQLQAEITKLQQR---CQSYGAQTEKLQQQLASEKGVH 373
>HAP1_MOUSE (O35668) Huntingtin-associated protein 1 (HAP-1)| Length = 628 Score = 35.0 bits (79), Expect = 0.15 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 10/114 (8%) Frame = +2 Query: 188 ELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDNLKDYAVRALVNAVDHLGTVAYKLTDL-- 361 +L+ L+ +L E E +L E H LDNL+D ++ V+ + ++ +L Sbjct: 266 QLETLQQKLRLLEE--ENDHLREEASH--LDNLEDEEQMLILECVEQFSEASQQMAELSE 321 Query: 362 --------YEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLRQQQMIGNATRH 499 YE+Q E++ ++ ++ L Q+ CQ+Y + QQ + H Sbjct: 322 VLVLRLEGYERQQKEITQLQAEITKLQQR---CQSYGAQTEKLQQMLASEKGIH 372
>RF1_METJA (Q58239) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 421 Score = 31.6 bits (70), Expect = 1.6 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%) Frame = +2 Query: 86 PPSWVAGSDAARPAPATFDEASME--------RSKSFVKALQELKNLRPQL-----YSAA 226 P + AG +AR D A+ E ++ F+ LQE K LR L ++ Sbjct: 173 PGKFKAGGQSARRLERLIDLAAHEFLQRVGQKANEQFLPLLQE-KKLRGILVGGPGHTKN 231 Query: 227 EYCEKSYLHSEQKHIVLDNL-----KDYAVRALV 313 E+ E YLH E K IVLD +++ +R L+ Sbjct: 232 EFVEGDYLHHELKKIVLDTFDLCYTEEFGIRELL 265
>RF1_METMP (P61731) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 419 Score = 31.6 bits (70), Expect = 1.6 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 18/100 (18%) Frame = +2 Query: 86 PPSWVAGSDAARPAPATFDEASME--------RSKSFVKALQELKNLRPQLYSAA----- 226 P + AG +AR D+A+ + ++SF+ L+E K L+ L Sbjct: 173 PGKFKAGGQSARRLERLIDDAAHQFMVRIGEYATESFMPILEE-KKLKGLLLGGPGNTKN 231 Query: 227 EYCEKSYLHSEQKHIVLDNL-----KDYAVRALVNAVDHL 331 E+ EK YLH E K ++D +++ +R L++ L Sbjct: 232 EFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDL 271
>TOP1_MYCTU (P0A620) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 934 Score = 30.4 bits (67), Expect = 3.6 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%) Frame = +2 Query: 128 PATFDEASMERSKSFVKALQELKNLRPQLYSA--AEYCEKSYLHSEQKHIVLDNLKDYAV 301 PA + EAS+ VKAL+EL RP YS+ ++ Y+H + +V + +AV Sbjct: 514 PARYTEASL------VKALEELGIGRPSTYSSIIKTIQDRGYVHKKGSALV-PSWVAFAV 566 Query: 302 RALVNAVDHLG-TVAYKLTDLYEQQVSEVS 388 L+ H G V Y T E ++ E++ Sbjct: 567 TGLLE--QHFGRLVDYDFTAAMEDELDEIA 594
>TOP1_MYCBO (P0A621) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 934 Score = 30.4 bits (67), Expect = 3.6 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%) Frame = +2 Query: 128 PATFDEASMERSKSFVKALQELKNLRPQLYSA--AEYCEKSYLHSEQKHIVLDNLKDYAV 301 PA + EAS+ VKAL+EL RP YS+ ++ Y+H + +V + +AV Sbjct: 514 PARYTEASL------VKALEELGIGRPSTYSSIIKTIQDRGYVHKKGSALV-PSWVAFAV 566 Query: 302 RALVNAVDHLG-TVAYKLTDLYEQQVSEVS 388 L+ H G V Y T E ++ E++ Sbjct: 567 TGLLE--QHFGRLVDYDFTAAMEDELDEIA 594
>TDXH1_SULTO (Q974S8) Probable peroxiredoxin 1 (EC 1.11.1.15)| Length = 215 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 86 PPSWVAGSDAARPAPATFDEASM 154 P +W G D P PA FDEA M Sbjct: 167 PANWQPGQDVIVPPPAIFDEAEM 189
>PYRH_CAMJE (Q9PN24) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 239 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 323 DHLGTVAYKLTDLYEQQVSEVSTVELKVASLNQQVLTCQTYTDKEGLR 466 DH+G +A + + Q+ E S +E++V S Q C+TY + R Sbjct: 73 DHMGMLATVINAIAIQEALESSGLEVRVQSAIQMEAFCETYIMRRAQR 120
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 143 EASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVL 277 E + RS +++ L + K +PQL+S E K LHS+ K VL Sbjct: 353 EVDISRSDAWLLGLNDGKCAQPQLHSKEEMGIKKNLHSQIKQNVL 397
>MATK_CHAGO (Q7YKY4) Maturase K (Intron maturase)| Length = 516 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 158 RSKSFVKALQELKNLRPQLYSAAEYCEKSYL 250 R KSF+ L+ + NL+ +L A YC+K +L Sbjct: 172 RDKSFLHLLKNIFNLKKELLIEAFYCDKFHL 202
>PHY_PICAB (Q40762) Phytochrome| Length = 1136 Score = 29.3 bits (64), Expect = 8.0 Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 15/131 (11%) Frame = +2 Query: 140 DEASMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKHIVLDN----------LK 289 ++A+M+R K QE++N + + E + L EQK IV + L Sbjct: 901 EQAAMDRLKELAYIRQEIRNPLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLD 960 Query: 290 DYAVRALVNAVDHLGTVAYKLTDLYEQQVSEVSTVELK-----VASLNQQVLTCQTYTDK 454 D + ++ + L T+ + L + + VS+ + + + +++ T Y D+ Sbjct: 961 DADLESIEDGYLELDTIEFTLGTVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQ 1020 Query: 455 EGLRQQQMIGN 487 LR QQ++ N Sbjct: 1021 --LRLQQILSN 1029 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,114,727 Number of Sequences: 219361 Number of extensions: 1009826 Number of successful extensions: 3315 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3313 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
