Clone Name | bart27g06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467659.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 248 bits (125), Expect = 2e-62 Identities = 188/209 (89%) Strand = Plus / Plus Query: 333 gtggccggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtg 392 |||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 311 gtggtcggcgtctaccagtgccgctccgacctcccggcctccgtttgcaccggctgcgtc 370 Query: 393 cgctccgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcag 452 |||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| Sbjct: 371 cgctccgccatctccaggctctcctcgctctgcgcctgggccaccggcggcgccgtgcag 430 Query: 453 ctgcgctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgcc 512 ||||| | ||||||||||||||||| |||||| | ||| ||||||||| | |||| ||| Sbjct: 431 ctgcgggcctgcttcgtgcgctacggcaacgacacgttcctcgggaagcaggacacggcc 490 Query: 513 gtgctcttcaagaagtgcggcggctcgcc 541 ||||| ||||||||||||||||||||||| Sbjct: 491 gtgctgttcaagaagtgcggcggctcgcc 519 Score = 172 bits (87), Expect = 8e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||| | || Sbjct: 149 ggcgacgacgactactcggggttcgtgtacgccgggtgctcgcaggggcgctacgcctcc 208 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 || |||||||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 209 ggcacgcagtacgcgtcggacgtcgactccgtgctcacctccgtcgccaacagcgcgccc 268 Query: 288 tacgccccctacgccaacatcac 310 ||| |||||||||||||| |||| Sbjct: 269 tactccccctacgccaacttcac 291
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 248 bits (125), Expect = 2e-62 Identities = 188/209 (89%) Strand = Plus / Plus Query: 333 gtggccggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtg 392 |||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 30674089 gtggtcggcgtctaccagtgccgctccgacctcccggcctccgtttgcaccggctgcgtc 30674148 Query: 393 cgctccgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcag 452 |||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| Sbjct: 30674149 cgctccgccatctccaggctctcctcgctctgcgcctgggccaccggcggcgccgtgcag 30674208 Query: 453 ctgcgctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgcc 512 ||||| | ||||||||||||||||| |||||| | ||| ||||||||| | |||| ||| Sbjct: 30674209 ctgcgggcctgcttcgtgcgctacggcaacgacacgttcctcgggaagcaggacacggcc 30674268 Query: 513 gtgctcttcaagaagtgcggcggctcgcc 541 ||||| ||||||||||||||||||||||| Sbjct: 30674269 gtgctgttcaagaagtgcggcggctcgcc 30674297 Score = 172 bits (87), Expect = 8e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||| | || Sbjct: 30673927 ggcgacgacgactactcggggttcgtgtacgccgggtgctcgcaggggcgctacgcctcc 30673986 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 || |||||||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 30673987 ggcacgcagtacgcgtcggacgtcgactccgtgctcacctccgtcgccaacagcgcgccc 30674046 Query: 288 tacgccccctacgccaacatcac 310 ||| |||||||||||||| |||| Sbjct: 30674047 tactccccctacgccaacttcac 30674069 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 ctccgcgccggcgccgacgacgac 182 |||||||||||||||||||||||| Sbjct: 5158774 ctccgcgccggcgccgacgacgac 5158797
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 248 bits (125), Expect = 2e-62 Identities = 188/209 (89%) Strand = Plus / Plus Query: 333 gtggccggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtg 392 |||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 14236 gtggtcggcgtctaccagtgccgctccgacctcccggcctccgtttgcaccggctgcgtc 14295 Query: 393 cgctccgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcag 452 |||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| Sbjct: 14296 cgctccgccatctccaggctctcctcgctctgcgcctgggccaccggcggcgccgtgcag 14355 Query: 453 ctgcgctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgcc 512 ||||| | ||||||||||||||||| |||||| | ||| ||||||||| | |||| ||| Sbjct: 14356 ctgcgggcctgcttcgtgcgctacggcaacgacacgttcctcgggaagcaggacacggcc 14415 Query: 513 gtgctcttcaagaagtgcggcggctcgcc 541 ||||| ||||||||||||||||||||||| Sbjct: 14416 gtgctgttcaagaagtgcggcggctcgcc 14444 Score = 172 bits (87), Expect = 8e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||| | || Sbjct: 14074 ggcgacgacgactactcggggttcgtgtacgccgggtgctcgcaggggcgctacgcctcc 14133 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 || |||||||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 14134 ggcacgcagtacgcgtcggacgtcgactccgtgctcacctccgtcgccaacagcgcgccc 14193 Query: 288 tacgccccctacgccaacatcac 310 ||| |||||||||||||| |||| Sbjct: 14194 tactccccctacgccaacttcac 14216
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 248 bits (125), Expect = 2e-62 Identities = 188/209 (89%) Strand = Plus / Plus Query: 333 gtggccggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtg 392 |||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 186097 gtggtcggcgtctaccagtgccgctccgacctcccggcctccgtttgcaccggctgcgtc 186156 Query: 393 cgctccgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcag 452 |||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| Sbjct: 186157 cgctccgccatctccaggctctcctcgctctgcgcctgggccaccggcggcgccgtgcag 186216 Query: 453 ctgcgctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgcc 512 ||||| | ||||||||||||||||| |||||| | ||| ||||||||| | |||| ||| Sbjct: 186217 ctgcgggcctgcttcgtgcgctacggcaacgacacgttcctcgggaagcaggacacggcc 186276 Query: 513 gtgctcttcaagaagtgcggcggctcgcc 541 ||||| ||||||||||||||||||||||| Sbjct: 186277 gtgctgttcaagaagtgcggcggctcgcc 186305 Score = 172 bits (87), Expect = 8e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||| | || Sbjct: 185935 ggcgacgacgactactcggggttcgtgtacgccgggtgctcgcaggggcgctacgcctcc 185994 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 || |||||||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 185995 ggcacgcagtacgcgtcggacgtcgactccgtgctcacctccgtcgccaacagcgcgccc 186054 Query: 288 tacgccccctacgccaacatcac 310 ||| |||||||||||||| |||| Sbjct: 186055 tactccccctacgccaacttcac 186077
>dbj|AK109142.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E10, full insert sequence Length = 1083 Score = 248 bits (125), Expect = 2e-62 Identities = 188/209 (89%) Strand = Plus / Plus Query: 333 gtggccggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtg 392 |||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 311 gtggtcggcgtctaccagtgccgctccgacctcccggcctccgtttgcaccggctgcgtc 370 Query: 393 cgctccgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcag 452 |||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| Sbjct: 371 cgctccgccatctccaggctctcctcgctctgcgcctgggccaccggcggcgccgtgcag 430 Query: 453 ctgcgctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgcc 512 ||||| | ||||||||||||||||| |||||| | ||| ||||||||| | |||| ||| Sbjct: 431 ctgcgggcctgcttcgtgcgctacggcaacgacacgttcctcgggaagcaggacacggcc 490 Query: 513 gtgctcttcaagaagtgcggcggctcgcc 541 ||||| ||||||||||||||||||||||| Sbjct: 491 gtgctgttcaagaagtgcggcggctcgcc 519 Score = 172 bits (87), Expect = 8e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||| | || Sbjct: 149 ggcgacgacgactactcggggttcgtgtacgccgggtgctcgcaggggcgctacgcctcc 208 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 || |||||||||| ||||| ||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 209 ggcacgcagtacgcgtcggacgtcgactccgtgctcacctccgtcgccaacagcgcgccc 268 Query: 288 tacgccccctacgccaacatcac 310 ||| |||||||||||||| |||| Sbjct: 269 tactccccctacgccaacttcac 291
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 123 bits (62), Expect = 6e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 7978415 ggcgccgacgactacacggcgttcgtgtacgccgggtgctcgcaggcgcgctacgacgcc 7978356 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 ||||||||||||| | ||| ||| ||| ||| |||| | | ||| ||||||||||| | Sbjct: 7978355 gggacgcagtacgcggcggacgtcgacaccgcgctctcggcgctcaccaacagcgcgggc 7978296 Query: 288 tacgccccctacgccaac 305 ||| || ||||||||||| Sbjct: 7978295 tacaccgcctacgccaac 7978278 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/199 (80%) Strand = Plus / Minus Query: 338 cggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtgcgctc 397 |||| ||||||||||||||||||||||| | ||||| ||||| ||||||||| | || Sbjct: 7978239 cggcgtctaccagtgccgctccgacctccccgccgcgatctgcggcggctgcgtcaggtc 7978180 Query: 398 cgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcagctgcg 457 ||| | ||| |||| | || |||||| || | ||||||| || ||||||||||| Sbjct: 7978179 ggccgccaccaagctcgcgtcgctctgcaactccgcggccggcgccggggtgcagctgcg 7978120 Query: 458 ctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgccgtgct 517 | |||||||||| ||||||||||||||||| ||| |||||| || | |||| | ||||| Sbjct: 7978119 cgcgtgcttcgtccgctacgggaacgactcgttcctcgggaggcaggacaccacggtgct 7978060 Query: 518 cttcaagaagtgcggcggc 536 |||||||||||||||||| Sbjct: 7978059 gttcaagaagtgcggcggc 7978041 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 6769287 gcgccggcgccgacgacgac 6769306
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 123 bits (62), Expect = 6e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 85933 ggcgccgacgactacacggcgttcgtgtacgccgggtgctcgcaggcgcgctacgacgcc 85874 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 ||||||||||||| | ||| ||| ||| ||| |||| | | ||| ||||||||||| | Sbjct: 85873 gggacgcagtacgcggcggacgtcgacaccgcgctctcggcgctcaccaacagcgcgggc 85814 Query: 288 tacgccccctacgccaac 305 ||| || ||||||||||| Sbjct: 85813 tacaccgcctacgccaac 85796 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/199 (80%) Strand = Plus / Minus Query: 338 cggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtgcgctc 397 |||| ||||||||||||||||||||||| | ||||| ||||| ||||||||| | || Sbjct: 85757 cggcgtctaccagtgccgctccgacctccccgccgcgatctgcggcggctgcgtcaggtc 85698 Query: 398 cgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcagctgcg 457 ||| | ||| |||| | || |||||| || | ||||||| || ||||||||||| Sbjct: 85697 ggccgccaccaagctcgcgtcgctctgcaactccgcggccggcgccggggtgcagctgcg 85638 Query: 458 ctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgccgtgct 517 | |||||||||| ||||||||||||||||| ||| |||||| || | |||| | ||||| Sbjct: 85637 cgcgtgcttcgtccgctacgggaacgactcgttcctcgggaggcaggacaccacggtgct 85578 Query: 518 cttcaagaagtgcggcggc 536 |||||||||||||||||| Sbjct: 85577 gttcaagaagtgcggcggc 85559
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 123 bits (62), Expect = 6e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 168 ggcgccgacgacgactcggcgttcgtgtacgccggctgctcgcaggggcgctacgacgcc 227 |||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 2184 ggcgccgacgactacacggcgttcgtgtacgccgggtgctcgcaggcgcgctacgacgcc 2125 Query: 228 gggacgcagtacgagtcgggcgtggactccgtgctcacatccctcgccaacagcgcgccc 287 ||||||||||||| | ||| ||| ||| ||| |||| | | ||| ||||||||||| | Sbjct: 2124 gggacgcagtacgcggcggacgtcgacaccgcgctctcggcgctcaccaacagcgcgggc 2065 Query: 288 tacgccccctacgccaac 305 ||| || ||||||||||| Sbjct: 2064 tacaccgcctacgccaac 2047 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/199 (80%) Strand = Plus / Minus Query: 338 cggcctctaccagtgccgctccgacctcgcggccgccgtctgcaccggctgcgtgcgctc 397 |||| ||||||||||||||||||||||| | ||||| ||||| ||||||||| | || Sbjct: 2008 cggcgtctaccagtgccgctccgacctccccgccgcgatctgcggcggctgcgtcaggtc 1949 Query: 398 cgccatctccaggctctcctccctctgctcctggtccgccggcggcgccgtgcagctgcg 457 ||| | ||| |||| | || |||||| || | ||||||| || ||||||||||| Sbjct: 1948 ggccgccaccaagctcgcgtcgctctgcaactccgcggccggcgccggggtgcagctgcg 1889 Query: 458 ctcgtgcttcgtgcgctacgggaacgactccttcgtcgggaagccgaacactgccgtgct 517 | |||||||||| ||||||||||||||||| ||| |||||| || | |||| | ||||| Sbjct: 1888 cgcgtgcttcgtccgctacgggaacgactcgttcctcgggaggcaggacaccacggtgct 1829 Query: 518 cttcaagaagtgcggcggc 536 |||||||||||||||||| Sbjct: 1828 gttcaagaagtgcggcggc 1810
>ref|XM_464428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2150 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ctccgcgccggcgccgacgacgac 182 |||||||||||||||||||||||| Sbjct: 109 ctccgcgccggcgccgacgacgac 86
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 ctccgcgccggcgccgacgacgac 182 |||||||||||||||||||||||| Sbjct: 119272 ctccgcgccggcgccgacgacgac 119295
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 ctccgcgccggcgccgacgacgac 182 |||||||||||||||||||||||| Sbjct: 52227 ctccgcgccggcgccgacgacgac 52250
>dbj|AK102694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103E20, full insert sequence Length = 2151 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ctccgcgccggcgccgacgacgac 182 |||||||||||||||||||||||| Sbjct: 109 ctccgcgccggcgccgacgacgac 86
>emb|AJ011521.1|KOX011521 Klebsiella oxytoca cymJ gene and gene encoding Orf366 Length = 3362 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 85 tgactagagcacgaagcagaagca 108 |||||||||||||||||||||||| Sbjct: 1562 tgactagagcacgaagcagaagca 1539
>gb|AC165253.2| Mus musculus BAC clone RP23-413P10 from chromosome 9, complete sequence Length = 200549 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 137 ctccgtcctctccctgctcctgc 159 ||||||||||||||||||||||| Sbjct: 47748 ctccgtcctctccctgctcctgc 47770
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 gtccgccggcggcgccgtgcagc 453 ||||||||||||||||||||||| Sbjct: 92843 gtccgccggcggcgccgtgcagc 92865
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 361 acctcgcggccgccgtctgcacc 383 ||||||||||||||||||||||| Sbjct: 19834 acctcgcggccgccgtctgcacc 19856
>dbj|AK015254.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930430K04 product:hypothetical protein, full insert sequence Length = 1505 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 137 ctccgtcctctccctgctcctgc 159 ||||||||||||||||||||||| Sbjct: 1399 ctccgtcctctccctgctcctgc 1421
>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence Length = 161953 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 402 atctccaggctctcctccctctg 424 ||||||||||||||||||||||| Sbjct: 39355 atctccaggctctcctccctctg 39333
>gb|AC118007.11| Mus musculus chromosome 9, clone RP23-377N5, complete sequence Length = 203921 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 137 ctccgtcctctccctgctcctgc 159 ||||||||||||||||||||||| Sbjct: 104264 ctccgtcctctccctgctcctgc 104286
>gb|AC133649.2| Mus musculus BAC clone RP23-341M13 from chromosome 19, complete sequence Length = 187971 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 ctccctctgctcctggtccgcc 437 |||||||||||||||||||||| Sbjct: 142660 ctccctctgctcctggtccgcc 142681
>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete sequence Length = 180309 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 ctccaggctctcctccctctgctcct 429 |||||| ||||||||||||||||||| Sbjct: 106384 ctccagtctctcctccctctgctcct 106409
>gb|AC148016.3| Mus musculus BAC clone RP23-71B24 from 19, complete sequence Length = 227795 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 416 ctccctctgctcctggtccgcc 437 |||||||||||||||||||||| Sbjct: 189126 ctccctctgctcctggtccgcc 189105
>gb|AC153585.16| Mus musculus 6 BAC RP23-432A17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 tcctctccctgctcctgctcc 162 ||||||||||||||||||||| Sbjct: 132548 tcctctccctgctcctgctcc 132568
>ref|XM_472303.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1863 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgacg 180 ||||||||||||||||||||| Sbjct: 211 tccgcgccggcgccgacgacg 231
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 433 ccgccggcggcgccgtgcagc 453 ||||||||||||||||||||| Sbjct: 2661174 ccgccggcggcgccgtgcagc 2661194
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 433 ccgccggcggcgccgtgcagc 453 ||||||||||||||||||||| Sbjct: 3868865 ccgccggcggcgccgtgcagc 3868885
>gb|AC113021.10| Mus musculus chromosome 6, clone RP23-186F2, complete sequence Length = 198397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 tcctctccctgctcctgctcc 162 ||||||||||||||||||||| Sbjct: 182295 tcctctccctgctcctgctcc 182275
>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence Length = 225868 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 400 ccatctccaggctctcctccctctg 424 |||||||||||||||||||| |||| Sbjct: 95467 ccatctccaggctctcctccttctg 95443
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 cgcgccggcgccgacgacgac 182 ||||||||||||||||||||| Sbjct: 3805673 cgcgccggcgccgacgacgac 3805693
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 cgcaggggcgctacgacgccg 228 ||||||||||||||||||||| Sbjct: 2147151 cgcaggggcgctacgacgccg 2147131
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 433 ccgccggcggcgccgtgcagc 453 ||||||||||||||||||||| Sbjct: 3610720 ccgccggcggcgccgtgcagc 3610740
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgacg 180 ||||||||||||||||||||| Sbjct: 82625 tccgcgccggcgccgacgacg 82645
>gb|AC022568.7| Homo sapiens chromosome 8, clone RP11-10H3, complete sequence Length = 138073 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 407 caggctctcctccctctgctcctgg 431 ||||||||||| ||||||||||||| Sbjct: 135582 caggctctccttcctctgctcctgg 135606
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgacg 180 ||||||||||||||||||||| Sbjct: 19300794 tccgcgccggcgccgacgacg 19300814
>gb|AC012457.7| Homo sapiens BAC clone RP11-509E16 from 2, complete sequence Length = 95214 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgcgctccgccatctccaggc 411 ||||||||||||||||||||| Sbjct: 27739 tgcgctccgccatctccaggc 27759
>gb|AC092698.11| Homo sapiens chromosome 8, clone RP11-813M16, complete sequence Length = 110085 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 407 caggctctcctccctctgctcctgg 431 ||||||||||| ||||||||||||| Sbjct: 104914 caggctctccttcctctgctcctgg 104890
>gb|AC140933.1| Gallus gallus BAC clone TAM31-60P10 from chromosome ul, complete sequence Length = 119242 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctgctcctgctccgcgccggcgccg 174 |||||||||||||||||| |||||| Sbjct: 105578 ctgctcctgctccgcgcccgcgccg 105602
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 cctacgccaacatcacttccc 315 ||||||||||||||||||||| Sbjct: 2891537 cctacgccaacatcacttccc 2891517
>dbj|AB023170.1| Homo sapiens mRNA for KIAA0953 protein, partial cds Length = 5161 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tgcgctccgccatctccaggc 411 ||||||||||||||||||||| Sbjct: 4290 tgcgctccgccatctccaggc 4310
>ref|NM_184376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 249 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 192 ctctgctcctgctccggcggcggcgccg 165
>ref|NM_189327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2355 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tccgacctcgcggccgccgt 376 |||||||||||||||||||| Sbjct: 361 tccgacctcgcggccgccgt 380
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 tcctctccgtcctctccctgctcc 156 |||||||| ||||||||||||||| Sbjct: 8662 tcctctccctcctctccctgctcc 8685
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 61316 gcgccggcgccgacgacgac 61335
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 17508 gcgccggcgccgacgacgac 17489
>ref|XM_583484.2| PREDICTED: Bos taurus similar to CG31320-PA (LOC506957), mRNA Length = 3018 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 cctgctccgcgccggcgccgacga 178 ||||||||||||| |||||||||| Sbjct: 744 cctgctccgcgcctgcgccgacga 767
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 ccatctccaggctctcctccctct 423 ||||||||||| |||||||||||| Sbjct: 64695 ccatctccaggttctcctccctct 64718
>gb|DQ479922.1| Mus musculus strain BTBR T+ tf/J mitochondrial glycerol-3-phosphate acyltransferase (Gpam) gene, complete cds; nuclear gene for mitochondrial product Length = 12308 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 8326 cacggcaacgttcctttccgtcct 8303
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 78530 gcgccggcgccgacgacgac 78549
>gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome 9, complete sequence Length = 170896 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 tcctctccgtcctctccctgctcc 156 |||||||| ||||||||||||||| Sbjct: 65316 tcctctccctcctctccctgctcc 65339
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 ccatctccaggctctcctccctct 423 ||||||||||| |||||||||||| Sbjct: 122552 ccatctccaggttctcctccctct 122529
>ref|XM_544767.2| PREDICTED: Canis familiaris similar to slit homolog 1 (LOC487642), mRNA Length = 2466 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccaggctctcctccctctgc 425 |||||||||||||||||||| Sbjct: 2317 ccaggctctcctccctctgc 2298
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 1413941 tccgcgccggcgccgacgac 1413960
>ref|NM_008149.2| Mus musculus glycerol-3-phosphate acyltransferase, mitochondrial (Gpam), mRNA Length = 3857 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 2463 cacggcaacgttcctttccgtcct 2440
>gb|AC129537.8| Mus musculus chromosome 15, clone RP23-238H13, complete sequence Length = 215416 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tcctctccgtcctctccctgctcc 156 |||||||| ||||||||||||||| Sbjct: 146571 tcctctccctcctctccctgctcc 146548
>gb|BC019201.1| Mus musculus glycerol-3-phosphate acyltransferase, mitochondrial, mRNA (cDNA clone MGC:29133 IMAGE:5041120), complete cds Length = 3857 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 2463 cacggcaacgttcctttccgtcct 2440
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ccgacctcgcggccgccgtc 377 |||||||||||||||||||| Sbjct: 3814577 ccgacctcgcggccgccgtc 3814596 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cgccggcggcgccgtgcagc 453 |||||||||||||||||||| Sbjct: 2731419 cgccggcggcgccgtgcagc 2731400
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgcgccggcgccgacgacg 180 |||||||||||||||||||| Sbjct: 3629364 ccgcgccggcgccgacgacg 3629383
>emb|AL034424.9|HS257E24 Human DNA sequence from clone RP1-257E24 on chromosome 20q12-13.1 Contains the 3' end of the SLC13A3 gene for member 3 of solute carrier family 13 (sodium-dependent dicarboxylate transporter), the C20orf123 gene for chromosome 20 open reading frame 123, the 5' end of a novel zinc finger protein gene, ESTs, STSs and GSSs, complete sequence Length = 127735 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ttcctctccgtcctctccctgctc 155 |||||||| ||||||||||||||| Sbjct: 22887 ttcctctcagtcctctccctgctc 22864
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 ccgccggcggcgccgtgcagctgc 456 ||||||||| |||||||||||||| Sbjct: 199437 ccgccggcgccgccgtgcagctgc 199460
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 ccatctccaggctctcctccctct 423 ||||||||||| |||||||||||| Sbjct: 9139 ccatctccaggttctcctccctct 9162
>gb|AC009711.10| Homo sapiens chromosome 15, clone RP11-356B18, complete sequence Length = 205925 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 ctctcctccctctgctcctggtcc 434 ||||||||||||| |||||||||| Sbjct: 61857 ctctcctccctctcctcctggtcc 61834
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccgcgccggcgccgacgacg 180 |||||||||||||||||||| Sbjct: 3485755 ccgcgccggcgccgacgacg 3485774
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 3802624 tccgcgccggcgccgacgac 3802605
>gb|AE005951.1| Caulobacter crescentus CB15 section 277 of 359 of the complete genome Length = 10783 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgcgccggcgccgacgacga 181 |||||||||||||||||||| Sbjct: 1432 cgcgccggcgccgacgacga 1413
>gb|AE011752.1| Xanthomonas axonopodis pv. citri str. 306, section 130 of 469 of the complete genome Length = 12030 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 4838 tccgcgccggcgccgacgac 4857
>gb|AE012211.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 119 of 460 of the complete genome Length = 14128 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 6978 tccgcgccggcgccgacgac 6997
>dbj|AB175925.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:sn Length = 1431 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1359 ctctgctcctgctccggcggcggcgccg 1332
>dbj|AB175924.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:LV61 Length = 1460 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1388 ctctgctcctgctccggcggcggcgccg 1361
>dbj|AB175923.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:cb22 Length = 1432 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1360 ctctgctcctgctccggcggcggcgccg 1333
>dbj|AB175922.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:yg2a Length = 1432 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1360 ctctgctcctgctccggcggcggcgccg 1333
>dbj|AB175921.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:ct56 Length = 1430 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1358 ctctgctcctgctccggcggcggcgccg 1331
>dbj|AB175920.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:ct51 Length = 1431 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1359 ctctgctcctgctccggcggcggcgccg 1332
>dbj|AB175919.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w1976 Length = 1460 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1388 ctctgctcctgctccggcggcggcgccg 1361
>dbj|AB175918.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w1972 Length = 1431 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1359 ctctgctcctgctccggcggcggcgccg 1332
>dbj|AB175917.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w1956 Length = 1457 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1385 ctctgctcctgctccggcggcggcgccg 1358
>dbj|AB175916.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w630 Length = 1433 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1361 ctctgctcctgctccggcggcggcgccg 1334
>dbj|AB175915.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w120 Length = 1422 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1350 ctctgctcctgctccggcggcggcgccg 1323
>dbj|AB175914.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w593 Length = 1421 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1349 ctctgctcctgctccggcggcggcgccg 1322
>dbj|AB175913.1| Oryza rufipogon met6 gene for metallothionein, complete cds, strain:w108 Length = 1456 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1384 ctctgctcctgctccggcggcggcgccg 1357
>dbj|AK137067.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430060D10 product:glycerol-3-phosphate acyltransferase, mitochondrial, full insert sequence Length = 3208 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 2739 cacggcaacgttcctttccgtcct 2716
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 3733801 tccgcgccggcgccgacgac 3733782
>tpg|BK000081.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like A3 gene, complete cds Length = 12300 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 5394 gcgccggcgccgacgacgac 5413
>gb|BC082776.1| Mus musculus glycerol-3-phosphate acyltransferase, mitochondrial, mRNA (cDNA clone IMAGE:4165513), containing frame-shift errors Length = 4269 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 760 cacggcaacgttcctttccgtcct 737
>dbj|AK047295.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930046K04 product:glycerol-3-phosphate acyltransferase, mitochondrial, full insert sequence Length = 3305 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 2455 cacggcaacgttcctttccgtcct 2432
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgcgccggcgccgacgacg 180 |||||||||||||||||||| Sbjct: 24105750 ccgcgccggcgccgacgacg 24105731
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 7936632 gcgccggcgccgacgacgac 7936613
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 27482400 gcgccggcgccgacgacgac 27482419
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tccgacctcgcggccgccgt 376 |||||||||||||||||||| Sbjct: 42183302 tccgacctcgcggccgccgt 42183321 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 2692586 ctctgctcctgctccggcggcggcgccg 2692613 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 2664487 ctctgctcctgctccggcggcggcgccg 2664514
>gb|AC122688.5| Homo sapiens 12 BAC RP11-158L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178315 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ggctctcctccctctgctcc 428 |||||||||||||||||||| Sbjct: 92683 ggctctcctccctctgctcc 92702
>gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, complete sequence Length = 208571 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccgtcctctccctgctcctg 158 |||||||||||||||||||| Sbjct: 164504 ccgtcctctccctgctcctg 164485
>gb|AC114765.6| Homo sapiens BAC clone RP11-379A15 from 2, complete sequence Length = 41918 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 ctctccgtcctctccctgctcctg 158 ||||||| |||||||||||||||| Sbjct: 20344 ctctccggcctctccctgctcctg 20321
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tccgacctcgcggccgccgt 376 |||||||||||||||||||| Sbjct: 56500 tccgacctcgcggccgccgt 56519
>gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-145o9, complete sequence Length = 107765 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gctctcctccctctgctcct 429 |||||||||||||||||||| Sbjct: 11090 gctctcctccctctgctcct 11071
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 cgccggcggcgccgtgcagc 453 |||||||||||||||||||| Sbjct: 219361 cgccggcggcgccgtgcagc 219380
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434B04 Length = 167029 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 142361 ctctgctcctgctccggcggcggcgccg 142388 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 114262 ctctgctcctgctccggcggcggcgccg 114289
>dbj|AK173888.1| Ciona intestinalis cDNA, clone:ciad041f09, full insert sequence Length = 1735 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 actgccgtgctcttcaagaa 526 |||||||||||||||||||| Sbjct: 684 actgccgtgctcttcaagaa 703
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 98966 gcgccggcgccgacgacgac 98985
>gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the complete genome Length = 10670 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ccgacctcgcggccgccgtc 377 |||||||||||||||||||| Sbjct: 261 ccgacctcgcggccgccgtc 242
>gb|U27302.2|CCU27302 Caulobacter crescentus FLAR protein (flaR) and FLAZ protein (flaZ) genes, complete cds; and unknown genes Length = 5081 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgcgccggcgccgacgacga 181 |||||||||||||||||||| Sbjct: 2046 cgcgccggcgccgacgacga 2027
>dbj|AK073433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042P17, full insert sequence Length = 1504 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tccgacctcgcggccgccgt 376 |||||||||||||||||||| Sbjct: 459 tccgacctcgcggccgccgt 478
>dbj|AK069318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014M14, full insert sequence Length = 3883 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 3481 ctctgctcctgctccggcggcggcgccg 3454
>gb|AY237357.1| Xanthomonas oryzae pv. oryzae putative inner membrane protein gene, partial cds; and conserved hypothetical protein 1, conserved hypothetical protein 2, RaxR (raxR), and RaxH (raxH) genes, complete cds Length = 6561 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 4391 tccgcgccggcgccgacgac 4410
>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence Length = 231792 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tcctctccgtcctctccctgctcc 156 |||||||| ||||||||||||||| Sbjct: 33798 tcctctccctcctctccctgctcc 33775
>gb|AC110206.21| Mus musculus chromosome 19, clone RP23-155H17, complete sequence Length = 199583 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 74000 cacggcaacgttcctttccgtcct 74023
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tccgcgccggcgccgacgac 179 |||||||||||||||||||| Sbjct: 3803230 tccgcgccggcgccgacgac 3803211
>dbj|D89931.1| Oryza sativa DNA for metallothionein-like protein, complete cds Length = 1460 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 1400 ctctgctcctgctccggcggcggcgccg 1373
>gb|U43530.1|OSU43530 Oryza sativa metallothionein-like type 2 (OsMT-2) mRNA, complete cds Length = 264 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 ctctgctcctggtccgccggcggcgccg 447 ||||||||||| |||| ||||||||||| Sbjct: 204 ctctgctcctgctccggcggcggcgccg 177
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgccggcgccgacgacgac 182 |||||||||||||||||||| Sbjct: 8006719 gcgccggcgccgacgacgac 8006700
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgcgccggcgccgacgacg 180 |||||||||||||||||||| Sbjct: 24033956 ccgcgccggcgccgacgacg 24033937
>emb|AL772418.4|CNS08C9W Oryza sativa chromosome 12, . Partial sequence from BAC OJ1473_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 32463 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgcgccggcgccgacgacg 180 |||||||||||||||||||| Sbjct: 20824 ccgcgccggcgccgacgacg 20805
>gb|M77003.1|MUSG3PAT Mouse glycerol-3-phosphate acyltransferase mRNA, complete cds Length = 6634 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cacggcaacgttcctctccgtcct 145 ||||||||||||||| |||||||| Sbjct: 3230 cacggcaacgttcctttccgtcct 3207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,328,839 Number of Sequences: 3902068 Number of extensions: 3328839 Number of successful extensions: 89224 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86399 Number of HSP's gapped (non-prelim): 2825 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)