ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart27f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192469.1| Oryza sativa (japonica cultivar-group), predic... 244 3e-61
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
3dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
4dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
5dbj|AK121359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 7e-59
6gb|BT018783.1| Zea mays clone EL01N0526G10.d mRNA sequence 214 2e-52
7ref|XM_464891.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.51
8ref|XM_506769.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.51
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
10dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
11dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
12dbj|AK073921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
13dbj|AK064350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
14gb|AC162458.4| Mus musculus chromosome 19, clone RP24-140G9, com... 42 2.0
15gb|AC102779.6| Mus musculus chromosome 19, clone RP23-460A15, co... 42 2.0
16gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, co... 42 2.0
17gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, co... 42 2.0
18dbj|AP006284.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.0
19gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome... 40 7.9
20ref|XM_809648.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.9
21gb|AC124540.4| Mus musculus BAC clone RP23-361G19 from chromosom... 40 7.9
22gb|AC009163.6| Homo sapiens chromosome 16 clone RP11-77K12, comp... 40 7.9
23emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on ch... 40 7.9
24gb|AC144658.33| Medicago truncatula clone mth2-31g20, complete s... 40 7.9
25gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complet... 40 7.9
26gb|AC104383.4| Homo sapiens chromosome 11, clone CTD-2381F24, co... 40 7.9
27gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome 40 7.9
28gb|AC019317.9| Homo sapiens chromosome , clone RP11-206L19, comp... 40 7.9
29gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosom... 40 7.9
30gb|AF219991.1|AF219991 Homo sapiens intestinal N-acetylglucosami... 40 7.9
31dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 7.9
32gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 ... 40 7.9
33dbj|AP002520.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.9
34gb|U56702.1|ONONEU3S2 Oncorhynchus nerka microsatellite sequence... 40 7.9 
>ref|NM_192469.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1221

 Score =  244 bits (123), Expect = 3e-61
 Identities = 213/243 (87%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttcattggatgctgttgttcctggtgatattcttgagaaaattttcaccttcttgccaa 400
           ||||||||||  |||||||||||| |||||| || |||| ||||||||| || || || |
Sbjct: 122 tttcattggacactgttgttcctgatgatatcctggagagaattttcacgtttttaccta 181

                                                                       
Query: 401 tagcaagcatgataaggtcaacagcagtgtgcaagagatggcatgatattatctactcaa 460
           ||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 182 tagtaagcatgataaggtcaacagcagtttgcaaaagatggcatgacattatctactcaa 241

                                                                       
Query: 461 gccggtatctttggacccacatgttgcctcagaggccctggtacttcatgttcacctgta 520
           || ||| |||||||||||||||||||||||||||||| |||||||| |||||||| | ||
Sbjct: 242 gcaggtttctttggacccacatgttgcctcagaggccatggtactttatgttcacttcta 301

                                                                       
Query: 521 acgagactgcttctggatatgcttatgaccccatcctccataaatggtatgatttagagc 580
           | || | |||| |||| ||||| |||||||| || ||||  |||||||||||||||||||
Sbjct: 302 atgaaagtgctgctgggtatgcatatgacccgattctccgcaaatggtatgatttagagc 361

              
Query: 581 ttc 583
           |||
Sbjct: 362 ttc 364



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 230 tcatggaagatgattcgtcatgggaagctcttccaattgagcgcatcagagttcctgcat 289
           ||||||||||| |||| ||||||  ||||||| | ||||| | ||| ||| || ||||||
Sbjct: 11  tcatggaagataattcttcatggacagctctttctattgatcacattagaatttctgcat 70

               
Query: 290 tcaa 293
           ||||
Sbjct: 71  tcaa 74
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  244 bits (123), Expect = 3e-61
 Identities = 213/243 (87%)
 Strand = Plus / Plus

                                                                            
Query: 341      tttcattggatgctgttgttcctggtgatattcttgagaaaattttcaccttcttgccaa 400
                ||||||||||  |||||||||||| |||||| || |||| ||||||||| || || || |
Sbjct: 26866771 tttcattggacactgttgttcctgatgatatcctggagagaattttcacgtttttaccta 26866830

                                                                            
Query: 401      tagcaagcatgataaggtcaacagcagtgtgcaagagatggcatgatattatctactcaa 460
                ||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 26866831 tagtaagcatgataaggtcaacagcagtttgcaaaagatggcatgacattatctactcaa 26866890

                                                                            
Query: 461      gccggtatctttggacccacatgttgcctcagaggccctggtacttcatgttcacctgta 520
                || ||| |||||||||||||||||||||||||||||| |||||||| |||||||| | ||
Sbjct: 26866891 gcaggtttctttggacccacatgttgcctcagaggccatggtactttatgttcacttcta 26866950

                                                                            
Query: 521      acgagactgcttctggatatgcttatgaccccatcctccataaatggtatgatttagagc 580
                | || | |||| |||| ||||| |||||||| || ||||  |||||||||||||||||||
Sbjct: 26866951 atgaaagtgctgctgggtatgcatatgacccgattctccgcaaatggtatgatttagagc 26867010

                   
Query: 581      ttc 583
                |||
Sbjct: 26867011 ttc 26867013



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                            
Query: 230      tcatggaagatgattcgtcatgggaagctcttccaattgagcgcatcagagttcctgcat 289
                ||||||||||| |||| ||||||  ||||||| | ||||| | ||| ||| || ||||||
Sbjct: 26866660 tcatggaagataattcttcatggacagctctttctattgatcacattagaatttctgcat 26866719

                    
Query: 290      tcaa 293
                ||||
Sbjct: 26866720 tcaa 26866723
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>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0445H04
          Length = 202821

 Score =  244 bits (123), Expect = 3e-61
 Identities = 213/243 (87%)
 Strand = Plus / Plus

                                                                         
Query: 341   tttcattggatgctgttgttcctggtgatattcttgagaaaattttcaccttcttgccaa 400
             ||||||||||  |||||||||||| |||||| || |||| ||||||||| || || || |
Sbjct: 48416 tttcattggacactgttgttcctgatgatatcctggagagaattttcacgtttttaccta 48475

                                                                         
Query: 401   tagcaagcatgataaggtcaacagcagtgtgcaagagatggcatgatattatctactcaa 460
             ||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 48476 tagtaagcatgataaggtcaacagcagtttgcaaaagatggcatgacattatctactcaa 48535

                                                                         
Query: 461   gccggtatctttggacccacatgttgcctcagaggccctggtacttcatgttcacctgta 520
             || ||| |||||||||||||||||||||||||||||| |||||||| |||||||| | ||
Sbjct: 48536 gcaggtttctttggacccacatgttgcctcagaggccatggtactttatgttcacttcta 48595

                                                                         
Query: 521   acgagactgcttctggatatgcttatgaccccatcctccataaatggtatgatttagagc 580
             | || | |||| |||| ||||| |||||||| || ||||  |||||||||||||||||||
Sbjct: 48596 atgaaagtgctgctgggtatgcatatgacccgattctccgcaaatggtatgatttagagc 48655

                
Query: 581   ttc 583
             |||
Sbjct: 48656 ttc 48658



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 230   tcatggaagatgattcgtcatgggaagctcttccaattgagcgcatcagagttcctgcat 289
             ||||||||||| |||| ||||||  ||||||| | ||||| | ||| ||| || ||||||
Sbjct: 48305 tcatggaagataattcttcatggacagctctttctattgatcacattagaatttctgcat 48364

                 
Query: 290   tcaa 293
             ||||
Sbjct: 48365 tcaa 48368
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>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684E06
          Length = 147004

 Score =  244 bits (123), Expect = 3e-61
 Identities = 213/243 (87%)
 Strand = Plus / Plus

                                                                          
Query: 341    tttcattggatgctgttgttcctggtgatattcttgagaaaattttcaccttcttgccaa 400
              ||||||||||  |||||||||||| |||||| || |||| ||||||||| || || || |
Sbjct: 102420 tttcattggacactgttgttcctgatgatatcctggagagaattttcacgtttttaccta 102479

                                                                          
Query: 401    tagcaagcatgataaggtcaacagcagtgtgcaagagatggcatgatattatctactcaa 460
              ||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 102480 tagtaagcatgataaggtcaacagcagtttgcaaaagatggcatgacattatctactcaa 102539

                                                                          
Query: 461    gccggtatctttggacccacatgttgcctcagaggccctggtacttcatgttcacctgta 520
              || ||| |||||||||||||||||||||||||||||| |||||||| |||||||| | ||
Sbjct: 102540 gcaggtttctttggacccacatgttgcctcagaggccatggtactttatgttcacttcta 102599

                                                                          
Query: 521    acgagactgcttctggatatgcttatgaccccatcctccataaatggtatgatttagagc 580
              | || | |||| |||| ||||| |||||||| || ||||  |||||||||||||||||||
Sbjct: 102600 atgaaagtgctgctgggtatgcatatgacccgattctccgcaaatggtatgatttagagc 102659

                 
Query: 581    ttc 583
              |||
Sbjct: 102660 ttc 102662



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                          
Query: 230    tcatggaagatgattcgtcatgggaagctcttccaattgagcgcatcagagttcctgcat 289
              ||||||||||| |||| ||||||  ||||||| | ||||| | ||| ||| || ||||||
Sbjct: 102309 tcatggaagataattcttcatggacagctctttctattgatcacattagaatttctgcat 102368

                  
Query: 290    tcaa 293
              ||||
Sbjct: 102369 tcaa 102372
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>dbj|AK121359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123E18, full
           insert sequence
          Length = 1983

 Score =  236 bits (119), Expect = 7e-59
 Identities = 212/243 (87%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttcattggatgctgttgttcctggtgatattcttgagaaaattttcaccttcttgccaa 400
           ||||||||||  |||||||||||| |||||| || |||| ||||||||| || || || |
Sbjct: 463 tttcattggacactgttgttcctgatgatatcctggagagaattttcacgtttttaccta 522

                                                                       
Query: 401 tagcaagcatgataaggtcaacagcagtgtgcaagagatggcatgatattatctactcaa 460
           ||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 523 tagtaagcatgataaggtcaacagcagtttgcaaaagatggcatgacattatctactcaa 582

                                                                       
Query: 461 gccggtatctttggacccacatgttgcctcagaggccctggtacttcatgttcacctgta 520
           || ||| |||||||||||||||||||||||||||||| |||||||| |||||||| | ||
Sbjct: 583 gcaggtttctttggacccacatgttgcctcagaggccatggtactttatgttcacttcta 642

                                                                       
Query: 521 acgagactgcttctggatatgcttatgaccccatcctccataaatggtatgatttagagc 580
           | || | |||| |||| ||||| |||||| | || ||||  |||||||||||||||||||
Sbjct: 643 atgaaagtgctgctgggtatgcatatgacacgattctccgcaaatggtatgatttagagc 702

              
Query: 581 ttc 583
           |||
Sbjct: 703 ttc 705



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 230 tcatggaagatgattcgtcatgggaagctcttccaattgagcgcatcagagttcctgcat 289
           ||||||||||| |||| ||||||  ||||||| | ||||| | ||| ||| || ||||||
Sbjct: 352 tcatggaagataattcttcatggacagctctttctattgatcacattagaatttctgcat 411

               
Query: 290 tcaa 293
           ||||
Sbjct: 412 tcaa 415
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>gb|BT018783.1| Zea mays clone EL01N0526G10.d mRNA sequence
          Length = 1806

 Score =  214 bits (108), Expect = 2e-52
 Identities = 291/352 (82%)
 Strand = Plus / Plus

                                                                       
Query: 232 atggaagatgattcgtcatgggaagctcttccaattgagcgcatcagagttcctgcattc 291
           ||||||||  |||| ||||||||   ||||||| |||||| ||| |||  ||||| ||||
Sbjct: 294 atggaagaccattcatcatgggactatcttccagttgagcacattagaactcctgtattc 353

                                                                       
Query: 292 aactttcgagttatttcagaggctagcaatggagaaaatgagctgccagtttcattggat 351
           |||| | ||||| |||| || |||||||||||||  || ||  |  || | |||||||||
Sbjct: 354 aactctggagttgtttccgaagctagcaatggaggcaaagacttctcaatatcattggat 413

                                                                       
Query: 352 gctgttgttcctggtgatattcttgagaaaattttcaccttcttgccaatagcaagcatg 411
           || || || |||| |||||| || ||||  |||||||| ||| |||| ||||||||||||
Sbjct: 414 gccgtcgtccctgatgatatcctggagaggattttcacattcctgcctatagcaagcatg 473

                                                                       
Query: 412 ataaggtcaacagcagtgtgcaagagatggcatgatattatctactcaagccggtatctt 471
           || ||| ||||| |||||||||||||||||||||| |||||||  |||||  | | ||| 
Sbjct: 474 atgagggcaacatcagtgtgcaagagatggcatgacattatctgttcaaggagatttctg 533

                                                                       
Query: 472 tggacccacatgttgcctcagaggccctggtacttcatgttcacctgtaacgagactgct 531
           |||||||||||| |||||||| |||| ||||||||||||||||||| |||  | ||||||
Sbjct: 534 tggacccacatgctgcctcagcggccatggtacttcatgttcacctctaataaaactgct 593

                                                               
Query: 532 tctggatatgcttatgaccccatcctccataaatggtatgatttagagcttc 583
            |||| ||||||| ||||||||||||||  || |||||||||||||||||||
Sbjct: 594 gctggttatgcttttgaccccatcctccgcaagtggtatgatttagagcttc 645
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>ref|XM_464891.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1629

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 485 tgcctcagaggccctggtacttcatgttcacctg 518
           ||||||||| ||| |||||||||||||| |||||
Sbjct: 535 tgcctcagaagccttggtacttcatgtttacctg 568
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>ref|XM_506769.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060K08.35
           mRNA
          Length = 1840

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 485 tgcctcagaggccctggtacttcatgttcacctg 518
           ||||||||| ||| |||||||||||||| |||||
Sbjct: 539 tgcctcagaagccttggtacttcatgtttacctg 572
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 485     tgcctcagaggccctggtacttcatgttcacctg 518
               ||||||||| ||| |||||||||||||| |||||
Sbjct: 9042649 tgcctcagaagccttggtacttcatgtttacctg 9042682
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>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1178F07
          Length = 144454

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 485   tgcctcagaggccctggtacttcatgttcacctg 518
             ||||||||| ||| |||||||||||||| |||||
Sbjct: 83095 tgcctcagaagccttggtacttcatgtttacctg 83128
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>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0060K08
          Length = 159626

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 485    tgcctcagaggccctggtacttcatgttcacctg 518
              ||||||||| ||| |||||||||||||| |||||
Sbjct: 115258 tgcctcagaagccttggtacttcatgtttacctg 115291
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>dbj|AK073921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071J17, full
           insert sequence
          Length = 1629

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 485 tgcctcagaggccctggtacttcatgttcacctg 518
           ||||||||| ||| |||||||||||||| |||||
Sbjct: 535 tgcctcagaagccttggtacttcatgtttacctg 568
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>dbj|AK064350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A05, full
           insert sequence
          Length = 1840

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 485 tgcctcagaggccctggtacttcatgttcacctg 518
           ||||||||| ||| |||||||||||||| |||||
Sbjct: 539 tgcctcagaagccttggtacttcatgtttacctg 572
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>gb|AC162458.4| Mus musculus chromosome 19, clone RP24-140G9, complete sequence
          Length = 212469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 205    ccatcgctctacctgcatttt 225
              |||||||||||||||||||||
Sbjct: 186836 ccatcgctctacctgcatttt 186816
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>gb|AC102779.6| Mus musculus chromosome 19, clone RP23-460A15, complete sequence
          Length = 214504

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 205    ccatcgctctacctgcatttt 225
              |||||||||||||||||||||
Sbjct: 205975 ccatcgctctacctgcatttt 205955
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>gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, complete sequence
          Length = 242249

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 205   ccatcgctctacctgcatttt 225
             |||||||||||||||||||||
Sbjct: 37365 ccatcgctctacctgcatttt 37345
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>gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, complete sequence
          Length = 196424

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    cacccaccctccaccccctca 42
             |||||||||||||||||||||
Sbjct: 72751 cacccaccctccaccccctca 72731
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>dbj|AP006284.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-496I9, complete
             sequence
          Length = 104658

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    cacccaccctccaccccctca 42
             |||||||||||||||||||||
Sbjct: 15518 cacccaccctccaccccctca 15498
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>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence
          Length = 278583

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ccctccaccccctcaatccc 47
             ||||||||||||||||||||
Sbjct: 47582 ccctccaccccctcaatccc 47563
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>ref|XM_809648.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508827.60) partial mRNA
          Length = 3375

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 526  actgcttctggatatgctta 545
            ||||||||||||||||||||
Sbjct: 1464 actgcttctggatatgctta 1483
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>gb|AC124540.4| Mus musculus BAC clone RP23-361G19 from chromosome 19, complete
            sequence
          Length = 199168

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ccctccaccccctcaatccc 47
            ||||||||||||||||||||
Sbjct: 3574 ccctccaccccctcaatccc 3593
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>gb|AC009163.6| Homo sapiens chromosome 16 clone RP11-77K12, complete sequence
          Length = 157358

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    cctcagaggccctggtactt 506
              ||||||||||||||||||||
Sbjct: 108623 cctcagaggccctggtactt 108642
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>emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on chromosome 11, complete
             sequence
          Length = 176011

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    cccaccctccaccccctcaa 43
             ||||||||||||||||||||
Sbjct: 63984 cccaccctccaccccctcaa 63965
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>gb|AC144658.33| Medicago truncatula clone mth2-31g20, complete sequence
          Length = 119041

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    atgctgttgttcctggtgat 369
              ||||||||||||||||||||
Sbjct: 118597 atgctgttgttcctggtgat 118616
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>gb|AC104808.4| Homo sapiens BAC clone RP11-636J1 from 4, complete sequence
          Length = 162461

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   ttggatgctgttgttcctgg 365
             ||||||||||||||||||||
Sbjct: 97929 ttggatgctgttgttcctgg 97948
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>gb|AC104383.4| Homo sapiens chromosome 11, clone CTD-2381F24, complete sequence
          Length = 143501

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    tcgccgcacccaccctccaccccc 39
             |||||||||||||| |||||||||
Sbjct: 65227 tcgccgcacccaccgtccaccccc 65204
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>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome
          Length = 1471282

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 523     gagactgcttctggatatgc 542
               ||||||||||||||||||||
Sbjct: 1322475 gagactgcttctggatatgc 1322494
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>gb|AC019317.9| Homo sapiens chromosome , clone RP11-206L19, complete sequence
          Length = 146836

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     tcgccgcacccaccctccaccccc 39
              |||||||||||||| |||||||||
Sbjct: 138994 tcgccgcacccaccgtccaccccc 138971
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>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete
             sequence
          Length = 190127

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    cccaccctccaccccctcaa 43
             ||||||||||||||||||||
Sbjct: 66849 cccaccctccaccccctcaa 66868
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>gb|AF219991.1|AF219991 Homo sapiens intestinal N-acetylglucosamine-6-O-sulfotransferase
             (CHST5) and corneal
             N-acetylglucosamine-6-O-sulfotransferase (CHST6) genes,
             complete cds
          Length = 71503

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   cctcagaggccctggtactt 506
             ||||||||||||||||||||
Sbjct: 55034 cctcagaggccctggtactt 55015
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    tgatattcttgagaaaattt 385
              ||||||||||||||||||||
Sbjct: 341080 tgatattcttgagaaaattt 341061
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>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence
          Length = 191904

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   tgataaggtcaacagcagtgtgca 433
             ||||||||||||||| ||||||||
Sbjct: 65033 tgataaggtcaacagtagtgtgca 65010
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>dbj|AP002520.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-705O3, complete
             sequence
          Length = 66000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   tgttgcctcagaggccctgg 501
             ||||||||||||||||||||
Sbjct: 16942 tgttgcctcagaggccctgg 16923
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>gb|U56702.1|ONONEU3S2 Oncorhynchus nerka microsatellite sequence Oneu3r
          Length = 336

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 ataaggtcaacagcagtgtg 431
           ||||||||||||||||||||
Sbjct: 168 ataaggtcaacagcagtgtg 187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,719,163
Number of Sequences: 3902068
Number of extensions: 4719163
Number of successful extensions: 89692
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89520
Number of HSP's gapped (non-prelim): 172
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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