ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27f05 |
|---|---|
| Clone Library Name | barley_pub |
>CHHA2_BOMMO (P05687) Chorion class high-cysteine HCA protein 12 precursor| (HC-A.12) Length = 124 Score = 33.1 bits (74), Expect = 0.54 Identities = 13/34 (38%), Positives = 13/34 (38%) Frame = -2 Query: 324 CSMSCSWGRGRCTGWGSACRTCPCTLPSCRWCPC 223 C C G G C G G C C C C C C Sbjct: 84 CGRCCGCGCGGCGGCGCGCGGCGCGCGGCGGCGC 117
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 33.1 bits (74), Expect = 0.54 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = -2 Query: 333 SRTCSMSCSWGRGRCTGWGSA---CRTCPCTLPS-CRWCPCTTAAGSS 202 S+ C SC +G C G + C +C C+ S C+ C C++ GSS Sbjct: 56 SKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGCGSS 103
>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein| 5.7) (Ultrahigh sulfur keratin-associated protein 5.7) (Keratin-associated protein 5-3) (Keratin-associated protein 5.3) Length = 165 Score = 32.7 bits (73), Expect = 0.71 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 312 CSWGRGRCTGWGSACRTCPCTLPSCRWCPCTTAAGSS 202 CS G G S C+ C C C+ C C++ GSS Sbjct: 103 CSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSS 139 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -2 Query: 303 GRGRCTGWGSACRTCPCTLPSC-RWCPCTTAAGSS 202 G G C G C +C C+ SC + C C++ GSS Sbjct: 76 GCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSS 110
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 32.3 bits (72), Expect = 0.92 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -2 Query: 327 TCSMSCSWGRGRCTGWGSACRTCPCTLPS-CRWCPCTTAAGSS 202 +CS G G C G C +C C+ S C+ C C++ GSS Sbjct: 53 SCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSS 95 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -2 Query: 324 CSMSCSWGRGRC--TGWGSACRTCPCTLPSCRWCPCTTAAGSSA 199 CS CS + C +G GS+C C C P C C C SS+ Sbjct: 77 CSQ-CSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSS 119
>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein| 5.1) (Ultrahigh sulfur keratin-associated protein 5.1) Length = 278 Score = 32.0 bits (71), Expect = 1.2 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 315 SCSWGRGRCTGWGSACRTCPCTLPSCRWCPCTTAAGSS 202 SC+ +G C GS+C C C C+ C C++ GSS Sbjct: 222 SCAGSKGGC---GSSCSQCSC----CKPCCCSSGCGSS 252
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 32.0 bits (71), Expect = 1.2 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%) Frame = -2 Query: 285 GWGSACRTCPCTLPSCRWCP-CTT 217 GWG C CP P C WCP C T Sbjct: 60 GWGRRCPRCP-PCPRCSWCPRCPT 82
>MTCU_CALSI (Q9U620) Copper-specific metallothionein-2 (CuMT-II)| Length = 64 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/42 (40%), Positives = 19/42 (45%) Frame = -2 Query: 324 CSMSCSWGRGRCTGWGSACRTCPCTLPSCRWCPCTTAAGSSA 199 C SC G G+C GS C C PS + C C A SA Sbjct: 5 CGTSCKCGSGKCC-CGSTCNCTTC--PSKQSCSCNDGACGSA 43
>GASA4_ARATH (P46690) Gibberellin-regulated protein 4 precursor| Length = 106 Score = 31.2 bits (69), Expect = 2.1 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Frame = +3 Query: 240 KKAGCMGKCDKRCP-----NQCIVLCPSCKTYCMC 329 K+ C +CD+RC CI C C C+C Sbjct: 44 KRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLC 78
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -2 Query: 303 GRGRCTGWGSACRTCPCTLPS-CRWCPCTTAAGSS 202 G G C G C +C C+ S C+ C C++ GSS Sbjct: 97 GCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSS 131
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 30.8 bits (68), Expect = 2.7 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Frame = +3 Query: 231 TNGKKAGCMGKCDKRCPNQCIVLCPS----CKTYCMCD 332 TN + C+ C C N+C V PS C+ C+C+ Sbjct: 3302 TNSQFTDCLPSCVPSCSNRCEVTSPSVPSSCREGCLCN 3339
>VE2_HPV15 (P36784) Regulatory protein E2| Length = 382 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -2 Query: 360 GHRKTRPRRSRTCSMSCSWGRGRCTGWGSACRTCPCTLPSCRWCPCTTAAGSSAR 196 G + R RRSR S+S +WGRG + G R+ +L R + + GSS R Sbjct: 212 GGNQRRRRRSRETSISPAWGRGGRSRRGPTTRSQSKSLSRSRSRSKSRSRGSSPR 266
>LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 30.8 bits (68), Expect = 2.7 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 15/67 (22%) Frame = +2 Query: 143 PAAEEAAAQLPHDHPGEVRAEEPAAVVQG--HQRQE--------GRV-----HGQVRQAL 277 P A H HPG RA+ P + V G H+R+ GR H +V+ Sbjct: 46 PGRANVARGCQHRHPGPQRADHPGSPVGGRRHRRRNLAHPGADPGRELRRVRHRRVQDER 105 Query: 278 PQPVHRP 298 P P HRP Sbjct: 106 PAPGHRP 112
>GASA3_ARATH (P46687) Gibberellin-regulated protein 3 precursor| Length = 99 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Frame = +3 Query: 243 KAGCMGKCDKRC-----PNQCIVLCPSCKTYCMC 329 K C G+C RC PN C+ C SC C C Sbjct: 38 KIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNC 71
>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein| 5.8) (Ultrahigh sulfur keratin-associated protein 5.8) (Keratin, ultra high-sulfur matrix protein B) (UHS keratin B) (UHS KerB) Length = 187 Score = 30.4 bits (67), Expect = 3.5 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -2 Query: 315 SCSWGRGRCTGWGSACRTCPCTLPSCRWCPCTTAAGSS 202 SCS G G S C+ C C+ C C++ GSS Sbjct: 124 SCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSS 161 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 Query: 312 CSWGRGRCTGWGSACRTCPCTLPSCRWCPCTTAAGSS 202 CS G G S C+ C C+ C C++ GSS Sbjct: 96 CSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSS 132 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = -2 Query: 315 SCSWGRGRCTGWGSA---CRTCPCTLPSC-RWCPCTTAAGSS 202 SC +G C G + C +C C+ SC + C C++ GSS Sbjct: 62 SCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSS 103
>NLK_HUMAN (Q9UBE8) Serine/threonine kinase NLK (EC 2.7.11.24) (Nemo-like| kinase) (LAK1 protein) Length = 515 Score = 30.4 bits (67), Expect = 3.5 Identities = 24/107 (22%), Positives = 31/107 (28%), Gaps = 5/107 (4%) Frame = +2 Query: 5 HHHHRTTHLSSV----HHLPRRRIH-GAAARCXXXXXXXXXXXXXXXXXXXPAAEEAAAQ 169 HHHH HL HH P+ +H G+AA AA Q Sbjct: 18 HHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQ 77 Query: 170 LPHDHPGEVRAEEPAAVVQGHQRQEGRVHGQVRQALPQPVHRPLPQL 310 P + P + + V+ Q H P QL Sbjct: 78 QQPYFPSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHHPQQQL 124
>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)| Length = 182 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 2/47 (4%) Frame = +3 Query: 222 CKDTNGKKAGC--MGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 C G K GC G C C + C V C C C CG Sbjct: 117 CGSCGGSKGGCGSCGGCGSGCGSSCCVPVCCCVPACSCSSCGKGGCG 163
>ANIS1_ANISI (Q7Z1K3) Major allergen Ani s 1 precursor (Excretory gland allergen| Ans1) (21 kDa allergen) Length = 194 Score = 30.0 bits (66), Expect = 4.6 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 11/78 (14%) Frame = +3 Query: 225 KDTNGKKAGCMGKCDKRCPN--QCIVL------CPSCKTYCMCDFYAGV-SCGDP-RFTG 374 +D+NG++ C G + +CPN QC ++ CP+ + Y GV G P + Sbjct: 100 EDSNGEQLVCAGMREDKCPNGYQCKMMAFMGLCCPTKEEELFAREYEGVCKSGKPVKMDR 159 Query: 375 GDGNNFYFHGKK-DQDFC 425 G G GK D FC Sbjct: 160 GSGWMMTILGKSCDDQFC 177
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -2 Query: 303 GRGRCTGWGSACRTCPCTLPS-CRWCPCTTAAGSS 202 G G C G C +C C+ S C+ C C++ GSS Sbjct: 180 GCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSS 214
>ZNFX1_HUMAN (Q9P2E3) NFX1-type zinc finger-containing protein 1| Length = 1918 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +3 Query: 162 PPNYHMITPGKFGQRSQQLSCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYC 323 P + H G+F +R QQ CK + C +C CI CP C+ C Sbjct: 1446 PGSCHSCFEGRFHERCQQ-PCKR--------LLICSHKCQEPCIGECPPCQRTC 1490
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = +2 Query: 155 EAAAQLPHDHPGEVRAEEPAAVVQGHQRQEGRVHGQVRQALPQPVHRPLPQLQDI 319 EAA +P + + + GH++ E V A P PVH P+P +++ Sbjct: 166 EAAPAVPEEEKKGFLEKIKEKLPGGHKKPEDAAAVPVTHAAPAPVHAPVPAPEEV 220
>NLK_MOUSE (O54949) Serine/threonine kinase NLK (EC 2.7.11.24) (Nemo-like| kinase) Length = 515 Score = 29.6 bits (65), Expect = 6.0 Identities = 24/107 (22%), Positives = 31/107 (28%), Gaps = 5/107 (4%) Frame = +2 Query: 5 HHHHRTTHLSSV----HHLPRRRIH-GAAARCXXXXXXXXXXXXXXXXXXXPAAEEAAAQ 169 HHHH HL HH P+ +H G+AA AA Q Sbjct: 18 HHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHPVQQHTPSAAAAAAAAAAAAAMLNPGQ 77 Query: 170 LPHDHPGEVRAEEPAAVVQGHQRQEGRVHGQVRQALPQPVHRPLPQL 310 P + P + + V+ Q H P QL Sbjct: 78 QQPYFPSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHHPQQQL 124
>MT_CARAU (P52723) Metallothionein (MT)| Length = 60 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +3 Query: 219 SCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 +CK TN + C C CP+ C C + C+C G SCG Sbjct: 17 TCKCTNCQCTTCKKSCCSCCPSG----CSKCASGCVC---KGNSCG 55
>MTA_CARCW (Q8AWG2) Metallothionein A (MT-A)| Length = 60 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +3 Query: 219 SCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 +CK TN + C C CP+ C C + C+C G SCG Sbjct: 17 TCKCTNCQCTTCKKSCCSCCPSG----CSKCASGCVC---KGNSCG 55
>MT2_CYPCA (Q9I9I0) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 60 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +3 Query: 219 SCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 +CK TN + C C CP+ C C + C+C G SCG Sbjct: 17 TCKCTNCQCTTCKKSCCSCCPSG----CSKCASGCVC---KGNSCG 55
>MT2_BRARE (Q7ZSY6) Metallothionein-2 (MT-2)| Length = 60 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +3 Query: 219 SCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 +CK TN + C C CP+ C C + C+C G SCG Sbjct: 17 TCKCTNCQCTTCKKSCCSCCPSG----CSKCASGCVC---KGNSCG 55
>MT1_BRARE (P52722) Metallothionein-1 (MT-1)| Length = 60 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +3 Query: 219 SCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 +CK TN + C C CP+ C C + C+C G SCG Sbjct: 17 TCKCTNCQCTTCKKSCCSCCPSG----CSKCASGCVC---KGNSCG 55
>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein| 18) (Small proline-rich-like epidermal differentiation complex protein 5A) Length = 118 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +3 Query: 252 CMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSC 353 C KC +CP QC CP + C C +G C Sbjct: 28 CPPKCPPKCPPQCSAPCPPPVSSC-CGSSSGGCC 60
>RGS19_HUMAN (P49795) Regulator of G-protein signaling 19 (RGS19)| (G-alpha-interacting protein) (GAIP protein) Length = 217 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -2 Query: 324 CSMSCSWGRGRCTGWGSACRTCPCTLPSCRWC 229 C SCSW + R W ++ + LPSC C Sbjct: 45 CCCSCSWNQERRRAWQASRESKLQPLPSCEVC 76
>FADI_VIBPA (Q87MM2) 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Fatty acid| oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Acyl-CoA ligase) (ACSs) Length = 435 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Frame = +2 Query: 155 EAAAQLPHDHPGEVRAEEPAAVVQGHQR-----QEGRVHGQVRQALPQPVHRPLPQLQDI 319 + A Q+ H G RAE+ A + H +EG++ G+V A P+P + + + ++ Sbjct: 185 QTAEQMAKTH-GISRAEQDALAHRSHTLASQAWKEGKIQGEVMTAFPEPYKKWISEDNNV 243 Query: 320 XXXXXXXXXXXXXPAF 367 PAF Sbjct: 244 RHDSTLEGYAKLRPAF 259
>EZ1_MAIZE (Q8S4P6) Polycomb protein EZ1 (Enhancer of zeste protein 1)| Length = 931 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +3 Query: 222 CKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMC 329 C+ N GC C K+CP C+ C+ YC C Sbjct: 675 CRQYN--PCGCQSTCGKQCP--CLSNGTCCEKYCGC 706
>MT_SCYTO (Q6J1T3) Metallothionein (MT)| Length = 68 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +3 Query: 258 GKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSC 353 G+C K C + C C +C C+C A C Sbjct: 33 GRCQKSCCSCCPAGCTNCANGCVCKGKASDKC 64
>MT_RUTRU (P80593) Metallothionein (MT)| Length = 60 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +3 Query: 219 SCKDTNGKKAGCMGKCDKRCPNQCIVLCPSCKTYCMCDFYAGVSCG 356 +CK TN + C C CP+ C C + C+C G SCG Sbjct: 17 TCKCTNCQCTTCKKSCCTCCPSG----CSKCASGCVC---KGNSCG 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.125 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,305,521 Number of Sequences: 219361 Number of extensions: 1108189 Number of successful extensions: 5212 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4337 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5057 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits)
