ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27f05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189426.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 496 bits (250), Expect = e-137 Identities = 360/396 (90%), Gaps = 8/396 (2%) Strand = Plus / Plus Query: 158 gctgccgcccaactaccacatgatcaccccggggaagttcgggc-------agaggagcc 210 |||||||||||||||||||||||||| |||||||| | |||||| ||||| || Sbjct: 99 gctgccgcccaactaccacatgatcaacccgggga-gctcgggcttgggcaagagggacc 157 Query: 211 agcagctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgaca 270 || ||||||||||| |||||||| ||||||||| ||| ||||||| ||||||||||| Sbjct: 158 aggagctgtcgtgcgccgacaccaagggcaagaagaaaggatgcatggccaagtgcgaca 217 Query: 271 agcgctgccccaaccagtgcatcgtcctctgccccagctgcaagacatactgcatgtgcg 330 |||||||||||||||| ||||||||| | ||||||||||||||||| | ||||||||||| Sbjct: 218 agcgctgccccaaccaatgcatcgtcatgtgccccagctgcaagaccttctgcatgtgcg 277 Query: 331 acttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggcaacaact 390 |||||||| | |||||||| ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 278 acttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggcaacaact 337 Query: 391 tctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacctccaca 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 338 tctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacctccaca 397 Query: 451 tcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacctggatcc 510 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 398 tcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacctggatcc 457 Query: 511 aggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||| ||||||| |||| Sbjct: 458 aggccctcggcatccgcttcgccgaccaccgcctct 493
>dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J03, full insert sequence Length = 1352 Score = 494 bits (249), Expect = e-136 Identities = 356/391 (91%), Gaps = 8/391 (2%) Strand = Plus / Plus Query: 158 gctgccgcccaactaccacatgatcaccccggggaagttcgggc-------agaggagcc 210 |||||||||||||||||||||||||| |||||||| | |||||| ||||| || Sbjct: 253 gctgccgcccaactaccacatgatcaacccgggga-gctcgggcttgggcaagagggacc 311 Query: 211 agcagctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgaca 270 || ||||||||||| |||||||| ||||||||| ||| ||||||| ||||||||||| Sbjct: 312 aggagctgtcgtgcgccgacaccaagggcaagaagaaaggatgcatggccaagtgcgaca 371 Query: 271 agcgctgccccaaccagtgcatcgtcctctgccccagctgcaagacatactgcatgtgcg 330 |||||||||||||||| ||||||||| | ||||||||||||||||| | ||||||||||| Sbjct: 372 agcgctgccccaaccaatgcatcgtcatgtgccccagctgcaagaccttctgcatgtgcg 431 Query: 331 acttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggcaacaact 390 |||||||| | |||||||| ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 432 acttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggcaacaact 491 Query: 391 tctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacctccaca 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 492 tctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacctccaca 551 Query: 451 tcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacctggatcc 510 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 552 tcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacctggatcc 611 Query: 511 aggccctcggcatccgcttcgcccaccaccg 541 ||||||||||||||||||||||| ||||||| Sbjct: 612 aggccctcggcatccgcttcgccgaccaccg 642
>ref|NM_189423.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 452 bits (228), Expect = e-124 Identities = 342/380 (90%) Strand = Plus / Plus Query: 167 caactaccacatgatcaccccggggaagttcgggcagaggagccagcagctgtcgtgcaa 226 |||||||||| | |||| ||| || | |||||| ||||| ||||||||| || |||| Sbjct: 96 caactaccacgtcatcaaccccggcaggttcggcaagagggaccagcagctctcctgcac 155 Query: 227 ggacaccaacggcaagaaggcagggtgcatgggcaagtgcgacaagcgctgccccaacca 286 ||| |||| ||||| ||||| | ||||||| ||||||||||||||||||||||||||| Sbjct: 156 cgactccaatggcaacaaggccgtctgcatggccaagtgcgacaagcgctgccccaacca 215 Query: 287 gtgcatcgtcctctgccccagctgcaagacatactgcatgtgcgacttctacgcgggcgt 346 |||||||||| | || ||| |||||||||| | ||||||||||||||||||| | ||||| Sbjct: 216 gtgcatcgtcatgtgtcccggctgcaagaccttctgcatgtgcgacttctaccccggcgt 275 Query: 347 gtcttgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaa 406 ||| ||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 276 gtcgtgcggcgacccgcggttcaccggcggcgacggcaacaacttctactttcacggcaa 335 Query: 407 gaaggaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcat 466 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 gaaggaccacgacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcat 395 Query: 467 cggcaagcgcaacccctccatgagccgcgacttcacctggatccaggccctcggcatccg 526 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 cggcaagcgcaaccccaccatgagccgcgacttcacctggatccaggccctcggcatccg 455 Query: 527 cttcgcccaccaccgtctct 546 ||||||| ||||||| |||| Sbjct: 456 cttcgccgaccaccgcctct 475
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 361 bits (182), Expect = 2e-96 Identities = 212/222 (95%) Strand = Plus / Plus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| | |||||||| ||||| |||||||| |||||||||||||| |||| Sbjct: 42699411 tgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggca 42699470 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 42699471 acaacttctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 42699530 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 42699531 tccacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacct 42699590 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 42699591 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 42699632 Score = 353 bits (178), Expect = 4e-94 Identities = 211/222 (95%) Strand = Plus / Minus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| | |||||||| ||||| |||||||| |||||||||||||| |||| Sbjct: 42693260 tgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggca 42693201 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 42693200 acaacttctactttcacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 42693141 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 42693140 tccacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacct 42693081 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 42693080 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 42693039 Score = 345 bits (174), Expect = 1e-91 Identities = 210/222 (94%) Strand = Plus / Minus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||| |||| Sbjct: 42697361 tgtgcgacttctacccgggcgtgtcgtgcggcgaccctcgcttcaccggcggcgacggca 42697302 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 42697301 acaacttctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 42697242 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 42697241 tgcacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgtgacttcacct 42697182 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 42697181 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 42697140 Score = 230 bits (116), Expect = 4e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| ||||| || |||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 42703589 tgcggcgacccacggttcaccggcgccgacggcaacaccttctacttccacggcaagaag 42703648 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 42703649 gagcaggacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcggc 42703708 Query: 471 aagcgcaacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttc 530 || | |||||| |||||| || |||||||||||||||||| ||||||||||| ||||| Sbjct: 42703709 aaccacaacccggccatgaagcgtgacttcacctggatccagtccctcggcatcagcttc 42703768 Query: 531 gcccaccaccgtctct 546 | | ||||||| |||| Sbjct: 42703769 ggcgaccaccgcctct 42703784 Score = 135 bits (68), Expect = 2e-28 Identities = 142/166 (85%), Gaps = 8/166 (4%) Strand = Plus / Plus Query: 158 gctgccgcccaactaccacatgatcaccccggggaagttcgggc-------agaggagcc 210 |||||||||||||||||||||||||| |||||||| | |||||| ||||| || Sbjct: 42699133 gctgccgcccaactaccacatgatcaacccgggga-gctcgggcttgggcaagagggacc 42699191 Query: 211 agcagctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgaca 270 || ||||||||||| |||||||| ||||||||| ||| ||||||| ||||||||||| Sbjct: 42699192 aggagctgtcgtgcgccgacaccaagggcaagaagaaaggatgcatggccaagtgcgaca 42699251 Query: 271 agcgctgccccaaccagtgcatcgtcctctgccccagctgcaagac 316 |||||||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 42699252 agcgctgccccaaccaatgcatcgtcatgtgccccagctgcaagac 42699297 Score = 107 bits (54), Expect = 4e-20 Identities = 138/165 (83%), Gaps = 7/165 (4%) Strand = Plus / Minus Query: 159 ctgccgcccaactaccacatgatcaccccggggaagttcgggcagaggag---ccagcag 215 ||||||||||||||||||||||||| |||||| | | ||| || ||| ||||||| Sbjct: 42697646 ctgccgcccaactaccacatgatcaacccgggtcacatgggggggaagagagaccagcag 42697587 Query: 216 ctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgacaagcgc 275 ||||||||| | |||||| | || |||||| ||| ||||||| |||||||||||||||| Sbjct: 42697586 ctgtcgtgcgacgacacccaggggaagaagaaaggatgcatggccaagtgcgacaagcgc 42697527 Query: 276 tgccccaaccag----tgcatcgtcctctgccccagctgcaagac 316 |||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 42697526 tgccccaaccagtgcatgcatcgtcatgtgccccagctgcaagac 42697482 Score = 99.6 bits (50), Expect = 9e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 167 caactaccacatgatcaccccggggaagttcgggcagaggagccagcagctgtcgtgcaa 226 |||||||||| | |||| ||| || | |||||| ||||| ||||||||| || |||| Sbjct: 42693514 caactaccacgtcatcaaccccggcaggttcggcaagagggaccagcagctctcctgcac 42693455 Query: 227 ggacaccaacggcaagaaggcagggtgcatgggcaagtgcgacaagcgctgccccaacca 286 ||| |||| ||||| ||||| | ||||||| ||||||||||||||||||||||||||| Sbjct: 42693454 cgactccaatggcaacaaggccgtctgcatggccaagtgcgacaagcgctgccccaacca 42693395 Query: 287 gtgcatcgtcctctgccccagctgcaagac 316 |||||||||| | || ||| |||||||||| Sbjct: 42693394 gtgcatcgtcatgtgtcccggctgcaagac 42693365 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgccgccggcgtcgaggccc 144 |||||||||||||||||||| Sbjct: 38812492 cgccgccggcgtcgaggccc 38812511
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 361 bits (182), Expect = 2e-96 Identities = 212/222 (95%) Strand = Plus / Plus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| | |||||||| ||||| |||||||| |||||||||||||| |||| Sbjct: 32176 tgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggca 32235 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 32236 acaacttctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 32295 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 32296 tccacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacct 32355 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 32356 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 32397 Score = 353 bits (178), Expect = 4e-94 Identities = 211/222 (95%) Strand = Plus / Minus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| | |||||||| ||||| |||||||| |||||||||||||| |||| Sbjct: 26025 tgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggttcaccggcggcgacggca 25966 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 25965 acaacttctactttcacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 25906 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 25905 tccacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgcgacttcacct 25846 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 25845 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 25804 Score = 345 bits (174), Expect = 1e-91 Identities = 210/222 (94%) Strand = Plus / Minus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||| |||| Sbjct: 30126 tgtgcgacttctacccgggcgtgtcgtgcggcgaccctcgcttcaccggcggcgacggca 30067 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 30066 acaacttctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 30007 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 30006 tgcacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgtgacttcacct 29947 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 29946 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 29905 Score = 230 bits (116), Expect = 4e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| ||||| || |||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 36354 tgcggcgacccacggttcaccggcgccgacggcaacaccttctacttccacggcaagaag 36413 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 36414 gagcaggacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcggc 36473 Query: 471 aagcgcaacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttc 530 || | |||||| |||||| || |||||||||||||||||| ||||||||||| ||||| Sbjct: 36474 aaccacaacccggccatgaagcgtgacttcacctggatccagtccctcggcatcagcttc 36533 Query: 531 gcccaccaccgtctct 546 | | ||||||| |||| Sbjct: 36534 ggcgaccaccgcctct 36549 Score = 135 bits (68), Expect = 2e-28 Identities = 142/166 (85%), Gaps = 8/166 (4%) Strand = Plus / Plus Query: 158 gctgccgcccaactaccacatgatcaccccggggaagttcgggc-------agaggagcc 210 |||||||||||||||||||||||||| |||||||| | |||||| ||||| || Sbjct: 31898 gctgccgcccaactaccacatgatcaacccgggga-gctcgggcttgggcaagagggacc 31956 Query: 211 agcagctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgaca 270 || ||||||||||| |||||||| ||||||||| ||| ||||||| ||||||||||| Sbjct: 31957 aggagctgtcgtgcgccgacaccaagggcaagaagaaaggatgcatggccaagtgcgaca 32016 Query: 271 agcgctgccccaaccagtgcatcgtcctctgccccagctgcaagac 316 |||||||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 32017 agcgctgccccaaccaatgcatcgtcatgtgccccagctgcaagac 32062 Score = 107 bits (54), Expect = 4e-20 Identities = 138/165 (83%), Gaps = 7/165 (4%) Strand = Plus / Minus Query: 159 ctgccgcccaactaccacatgatcaccccggggaagttcgggcagaggag---ccagcag 215 ||||||||||||||||||||||||| |||||| | | ||| || ||| ||||||| Sbjct: 30411 ctgccgcccaactaccacatgatcaacccgggtcacatgggggggaagagagaccagcag 30352 Query: 216 ctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgacaagcgc 275 ||||||||| | |||||| | || |||||| ||| ||||||| |||||||||||||||| Sbjct: 30351 ctgtcgtgcgacgacacccaggggaagaagaaaggatgcatggccaagtgcgacaagcgc 30292 Query: 276 tgccccaaccag----tgcatcgtcctctgccccagctgcaagac 316 |||||||||||| ||||||||| | ||||||||||||||||| Sbjct: 30291 tgccccaaccagtgcatgcatcgtcatgtgccccagctgcaagac 30247 Score = 99.6 bits (50), Expect = 9e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 167 caactaccacatgatcaccccggggaagttcgggcagaggagccagcagctgtcgtgcaa 226 |||||||||| | |||| ||| || | |||||| ||||| ||||||||| || |||| Sbjct: 26279 caactaccacgtcatcaaccccggcaggttcggcaagagggaccagcagctctcctgcac 26220 Query: 227 ggacaccaacggcaagaaggcagggtgcatgggcaagtgcgacaagcgctgccccaacca 286 ||| |||| ||||| ||||| | ||||||| ||||||||||||||||||||||||||| Sbjct: 26219 cgactccaatggcaacaaggccgtctgcatggccaagtgcgacaagcgctgccccaacca 26160 Query: 287 gtgcatcgtcctctgccccagctgcaagac 316 |||||||||| | || ||| |||||||||| Sbjct: 26159 gtgcatcgtcatgtgtcccggctgcaagac 26130
>ref|NM_189425.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 345 bits (174), Expect = 1e-91 Identities = 210/222 (94%) Strand = Plus / Plus Query: 325 tgtgcgacttctacgcgggcgtgtcttgcggtgacccgcgtttcaccggcggcgatggca 384 |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||| |||| Sbjct: 230 tgtgcgacttctacccgggcgtgtcgtgcggcgaccctcgcttcaccggcggcgacggca 289 Query: 385 acaacttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacc 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 290 acaacttctacttccacggcaagaaggaccacgacttctgcatcgtctccgacgccgacc 349 Query: 445 tccacatcaacgcccacttcatcggcaagcgcaacccctccatgagccgcgacttcacct 504 | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 350 tgcacatcaacgcccacttcatcggcaagcgcaaccccaccatgagccgtgacttcacct 409 Query: 505 ggatccaggccctcggcatccgcttcgcccaccaccgtctct 546 ||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 410 ggatccaggccctcggcatccgcttcgccgaccaccgcctct 451 Score = 101 bits (51), Expect = 2e-18 Identities = 116/137 (84%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 159 ctgccgcccaactaccacatgatcaccccggggaagttcgggcagaggag---ccagcag 215 ||||||||||||||||||||||||| |||||| | | ||| || ||| ||||||| Sbjct: 88 ctgccgcccaactaccacatgatcaacccgggtcacatgggggggaagagagaccagcag 147 Query: 216 ctgtcgtgcaaggacaccaacggcaagaaggcagggtgcatgggcaagtgcgacaagcgc 275 ||||||||| | |||||| | || |||||| ||| ||||||| |||||||||||||||| Sbjct: 148 ctgtcgtgcgacgacacccaggggaagaagaaaggatgcatggccaagtgcgacaagcgc 207 Query: 276 tgccccaaccagtgcat 292 ||||||||||||||||| Sbjct: 208 tgccccaaccagtgcat 224
>dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, complete cds Length = 1225 Score = 311 bits (157), Expect = 1e-81 Identities = 220/241 (91%) Strand = Plus / Plus Query: 300 tgccccagctgcaagacatactgcatgtgcgacttctacgcgggcgtgtcttgcggtgac 359 ||||| ||||||||||||| |||| ||||||||||||| | |||||||| ||||| ||| Sbjct: 277 tgcccaagctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcgac 336 Query: 360 ccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaaggaccaggac 419 || || ||||| |||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 337 ccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccgggac 396 Query: 420 ttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaac 479 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 397 ttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaac 456 Query: 480 ccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcgcccaccac 539 || ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 457 ccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttcgcgcaccac 516 Query: 540 c 540 | Sbjct: 517 c 517
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 274 bits (138), Expect = 3e-70 Identities = 213/238 (89%) Strand = Plus / Plus Query: 294 gtcctctgccccagctgcaagacatactgcatgtgcgacttctacgcgggcgtgtcttgc 353 ||||||||||||| ||||||||| | |||| | |||||||||||| ||||||| || ||| Sbjct: 39980 gtcctctgccccacctgcaagaccttctgcctctgcgacttctacccgggcgtctcctgc 40039 Query: 354 ggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaaggac 413 || ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 40040 ggcgacccccgcttcaccggcggcgacggcaacaacttctacttccacggcaagaaggac 40099 Query: 414 caggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaag 473 | ||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 40100 cgcgacttctgcctcctctccgacgccgccctccacgtcaacgcccacttcatcggcaag 40159 Query: 474 cgcaacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcg 531 |||||| || ||||| |||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 40160 cgcaacgccgccatgtcccgcgacttcacctggatccaggcgctcggcgtcctcttcg 40217
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 274 bits (138), Expect = 3e-70 Identities = 213/238 (89%) Strand = Plus / Plus Query: 294 gtcctctgccccagctgcaagacatactgcatgtgcgacttctacgcgggcgtgtcttgc 353 ||||||||||||| ||||||||| | |||| | |||||||||||| ||||||| || ||| Sbjct: 378333 gtcctctgccccacctgcaagaccttctgcctctgcgacttctacccgggcgtctcctgc 378392 Query: 354 ggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaaggac 413 || ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 378393 ggcgacccccgcttcaccggcggcgacggcaacaacttctacttccacggcaagaaggac 378452 Query: 414 caggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaag 473 | ||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 378453 cgcgacttctgcctcctctccgacgccgccctccacgtcaacgcccacttcatcggcaag 378512 Query: 474 cgcaacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcg 531 |||||| || ||||| |||||||||||||||||||||||| |||||| ||| ||||| Sbjct: 378513 cgcaacgccgccatgtcccgcgacttcacctggatccaggcgctcggcgtcctcttcg 378570 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 357 gacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaaggaccag 416 |||||||| |||| ||||||||| ||||||| ||||||||||||||| |||| Sbjct: 27262843 gacccgcggttcatcggcggcgacggcaacacgttctacttccacggccgccgtgaccgc 27262902 Query: 417 gacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaa 472 ||||||||| | |||||||||| |||| |||||||||| ||||||| ||||||| Sbjct: 27262903 gacttctgcctgctctccgacgcgaacctgcacatcaacggccacttcgtcggcaa 27262958 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ggcggccgccgccggcgtcgaggc 142 ||||||||||||||||| |||||| Sbjct: 27267021 ggcggccgccgccggcggcgaggc 27267044
>ref|NM_189428.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 230 bits (116), Expect = 4e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| ||||| || |||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 325 tgcggcgacccacggttcaccggcgccgacggcaacaccttctacttccacggcaagaag 384 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 385 gagcaggacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcggc 444 Query: 471 aagcgcaacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttc 530 || | |||||| |||||| || |||||||||||||||||| ||||||||||| ||||| Sbjct: 445 aaccacaacccggccatgaagcgtgacttcacctggatccagtccctcggcatcagcttc 504 Query: 531 gcccaccaccgtctct 546 | | ||||||| |||| Sbjct: 505 ggcgaccaccgcctct 520
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||| | |||| ||||||||| |||||| |||||||||||| ||| || | Sbjct: 138473 tgcggcgacccgaggttcatcggcggcgacggcaacgccttctacttccatggccggagg 138532 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 138533 gacgccgacttctgcgtcgtctccgaccgcgacctccacatcaacgcgcacttcatcggc 138592 Query: 471 aagcgc 476 |||||| Sbjct: 138593 aagcgc 138598 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 492 cgcgacttcacctggatccaggcc 515 |||||||||||||||||||||||| Sbjct: 138617 cgcgacttcacctggatccaggcc 138640
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||| | |||| ||||||||| |||||| |||||||||||| ||| || | Sbjct: 14616 tgcggcgacccgaggttcatcggcggcgacggcaacgccttctacttccatggccggagg 14675 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 14676 gacgccgacttctgcgtcgtctccgaccgcgacctccacatcaacgcgcacttcatcggc 14735 Query: 471 aagcgc 476 |||||| Sbjct: 14736 aagcgc 14741 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 492 cgcgacttcacctggatccaggcc 515 |||||||||||||||||||||||| Sbjct: 14760 cgcgacttcacctggatccaggcc 14783
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||| | |||| ||||||||| |||||| |||||||||||| ||| || | Sbjct: 2362474 tgcggcgacccgaggttcatcggcggcgacggcaacgccttctacttccatggccggagg 2362533 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2362534 gacgccgacttctgcgtcgtctccgaccgcgacctccacatcaacgcgcacttcatcggc 2362593 Query: 471 aagcgc 476 |||||| Sbjct: 2362594 aagcgc 2362599 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 492 cgcgacttcacctggatccaggcc 515 |||||||||||||||||||||||| Sbjct: 2362618 cgcgacttcacctggatccaggcc 2362641 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tggcggccgccgccggcgtc 137 |||||||||||||||||||| Sbjct: 10514935 tggcggccgccgccggcgtc 10514916
>dbj|AK106826.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E12, full insert sequence Length = 1747 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||| | |||| ||||||||| |||||| |||||||||||| ||| || | Sbjct: 1587 tgcggcgacccgaggttcatcggcggcgacggcaacgccttctacttccatggccggagg 1528 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1527 gacgccgacttctgcgtcgtctccgaccgcgacctccacatcaacgcgcacttcatcggc 1468 Query: 471 aagcgc 476 |||||| Sbjct: 1467 aagcgc 1462 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 492 cgcgacttcacctggatccaggcc 515 |||||||||||||||||||||||| Sbjct: 1443 cgcgacttcacctggatccaggcc 1420
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||| | |||| ||||||||| |||||| |||||||||||| ||| || | Sbjct: 2370255 tgcggcgacccgaggttcatcggcggcgacggcaacgccttctacttccatggccggagg 2370314 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2370315 gacgccgacttctgcgtcgtctccgaccgcgacctccacatcaacgcgcacttcatcggc 2370374 Query: 471 aagcgc 476 |||||| Sbjct: 2370375 aagcgc 2370380 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 492 cgcgacttcacctggatccaggcc 515 |||||||||||||||||||||||| Sbjct: 2370399 cgcgacttcacctggatccaggcc 2370422 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tggcggccgccgccggcgtc 137 |||||||||||||||||||| Sbjct: 10586479 tggcggccgccgccggcgtc 10586460
>gb|AF134579.1|AF134579 Zea mays clone AGPZm1 arabinogalactan protein (agp) mRNA, partial cds Length = 825 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||||| |||| ||||||||| |||||| |||||||||||||||| | Sbjct: 11 tgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgg 70 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| | |||||||| |||||||||||||||||| |||||||||||| Sbjct: 71 gacgccgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggc 130 Query: 471 aagc 474 |||| Sbjct: 131 aagc 134
>gb|AY111354.1| Zea mays CL1277_1 mRNA sequence Length = 1328 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||||| |||| ||||||||| |||||| |||||||||||||||| | Sbjct: 361 tgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgg 420 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| | |||||||| |||||||||||||||||| |||||||||||| Sbjct: 421 gacgccgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggc 480 Query: 471 aagc 474 |||| Sbjct: 481 aagc 484
>dbj|AB021176.1| Zea mays ZmRCP2 mRNA for root cap protein 2, complete cds Length = 1318 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 351 tgcggtgacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaag 410 ||||| |||||||| |||| ||||||||| |||||| |||||||||||||||| | Sbjct: 361 tgcggcgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgg 420 Query: 411 gaccaggacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggc 470 ||| ||||||||| | |||||||| |||||||||||||||||| |||||||||||| Sbjct: 421 gacgccgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggc 480 Query: 471 aagc 474 |||| Sbjct: 481 aagc 484
>ref|XM_472395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 417 gacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgc 476 ||||||||| | ||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct: 373 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcggcaagcgc 432 Query: 477 aacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcg 531 ||| | | | || |||||||||||| | |||||||||||||||||||||| Sbjct: 433 aacgcggcggcggcacgggacttcacctgggtgcaggccctcggcatccgcttcg 487
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 417 gacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgc 476 ||||||||| | ||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct: 20580 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcggcaagcgc 20639 Query: 477 aacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcg 531 ||| | | | || |||||||||||| | |||||||||||||||||||||| Sbjct: 20640 aacgcggcggcggcacgggacttcacctgggtgcaggccctcggcatccgcttcg 20694
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 417 gacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgc 476 ||||||||| | ||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct: 20289947 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcggcaagcgc 20290006 Query: 477 aacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcg 531 ||| | | | || |||||||||||| | |||||||||||||||||||||| Sbjct: 20290007 aacgcggcggcggcacgggacttcacctgggtgcaggccctcggcatccgcttcg 20290061 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tccaggccctcggcatccgc 527 |||||||||||||||||||| Sbjct: 26682840 tccaggccctcggcatccgc 26682859
>dbj|AK108077.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E01, full insert sequence Length = 1481 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 417 gacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgc 476 ||||||||| | ||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct: 458 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcggcaagcgc 517 Query: 477 aacccctccatgagccgcgacttcacctggatccaggccctcggcatccgcttcg 531 ||| | | | || |||||||||||| | |||||||||||||||||||||| Sbjct: 518 aacgcggcggcggcacgggacttcacctgggtgcaggccctcggcatccgcttcg 572
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 357 gacccgcgtttcaccggcggcgatggcaacaacttctacttccacggcaagaaggaccag 416 |||||||| |||| ||||||||| ||||||| ||||||||||||||| |||| Sbjct: 137811 gacccgcggttcatcggcggcgacggcaacacgttctacttccacggccgccgtgaccgc 137870 Query: 417 gacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaa 472 ||||||||| | |||||||||| |||| |||||||||| ||||||| ||||||| Sbjct: 137871 gacttctgcctgctctccgacgcgaacctgcacatcaacggccacttcgtcggcaa 137926 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ggcggccgccgccggcgtcgaggc 142 ||||||||||||||||| |||||| Sbjct: 141989 ggcggccgccgccggcggcgaggc 142012
>dbj|AP004982.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04L20, TM0437a, complete sequence Length = 48314 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 393 tacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacctccacatc 452 ||||||||||||||||| ||| |||||||| |||||||||| || |||||||||| Sbjct: 13865 tacttccacggcaagaaagacagcaacttctgcctcgtctccgatcccaacctccacata 13924 Query: 453 aacgcccacttcatcggcaa 472 |||||||| ||||| ||||| Sbjct: 13925 aacgcccatttcattggcaa 13944 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 393 tacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacctccacatc 452 ||||||||||||||||| ||| |||||||| | || |||||| | |||||||||| Sbjct: 26099 tacttccacggcaagaaagacagcaacttctgcctggtatccgacccaaacctccacata 26040 Query: 453 aacgcccacttcatcggca 471 ||||| ||||||||||||| Sbjct: 26039 aacgcacacttcatcggca 26021
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 273 cgctgccccaaccagtgcatcgtcctctgccccagctgcaagacatactgc 323 ||||||||| | || |||||||||||||||||| ||||||||||| |||| Sbjct: 104192 cgctgcccccagcaatgcatcgtcctctgccccgactgcaagacattctgc 104242
>gb|L47117.1|PIAEMB7R Picea glauca late embryogenesis abundant protein (EMB7) mRNA, complete cds Length = 1245 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Plus Query: 390 ttctacttccacggcaagaaggaccaggacttctgcatcgtctccgacgccgacctccac 449 ||||| |||||||| |||| || ||||| ||||| || | |||||| || |||||||| Sbjct: 298 ttctatttccacgggaagagagatcaggatttctgtctcatttccgactccaacctccac 357 Query: 450 atcaacgcccacttcatcggcaag 473 |||||||| || ||||| |||||| Sbjct: 358 atcaacgctcatttcattggcaag 381
>ref|XM_524042.1| PREDICTED: Pan troglodytes similar to transmembrane serine protease 9; polyserase 1 (LOC468655), mRNA Length = 3552 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 gaaggaggatccatggcgcggcagct 79 |||||||| ||||||||||||||||| Sbjct: 3247 gaaggaggctccatggcgcggcagct 3272
>ref|NM_197732.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0042H09.7), mRNA Length = 1781 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 cggccgccgccggcgtcgaggcccagccgc 150 ||||||||||||||||||| || ||||||| Sbjct: 1502 cggccgccgccggcgtcgacgcacagccgc 1473
>ref|NM_182973.1| Homo sapiens transmembrane protease, serine 9 (TMPRSS9), mRNA Length = 3180 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 gaaggaggatccatggcgcggcagct 79 |||||||| ||||||||||||||||| Sbjct: 2875 gaaggaggctccatggcgcggcagct 2900
>gb|DQ352997.1| Prenolepis imparis voucher CS0297 abdominal-A (AbdA) gene, partial cds Length = 535 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtcga 139 ||||||||||||||||||| |||||| Sbjct: 385 gccctggcggccgccgccgccgtcga 410
>gb|DQ352954.1| Plagiolepis sp. CSM-2006 abdominal-A (AbdA) gene, partial cds Length = 645 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtcga 139 ||||||||||||||||||| |||||| Sbjct: 382 gccctggcggccgccgccgccgtcga 407
>emb|AJ488946.1|HSA488946 Homo sapiens mRNA for polyserase-IA protein Length = 3180 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 gaaggaggatccatggcgcggcagct 79 |||||||| ||||||||||||||||| Sbjct: 2875 gaaggaggctccatggcgcggcagct 2900
>dbj|AK131261.1| Homo sapiens cDNA FLJ16193 fis, clone BRTHA2018011, weakly similar to EPITHIN (EC 3.4.21.-) Length = 1979 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 gaaggaggatccatggcgcggcagct 79 |||||||| ||||||||||||||||| Sbjct: 1463 gaaggaggctccatggcgcggcagct 1488
>gb|AE005842.1| Caulobacter crescentus CB15 section 168 of 359 of the complete genome Length = 10081 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 gatggccgctctggtggccgtg 110 |||||||||||||||||||||| Sbjct: 9903 gatggccgctctggtggccgtg 9882
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 cggccgccgccggcgtcgaggcccagccgc 150 ||||||||||||||||||| || ||||||| Sbjct: 89875 cggccgccgccggcgtcgacgcacagccgc 89846
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 121 cggccgccgccggcgtcgaggcccagccgc 150 ||||||||||||||||||| || ||||||| Sbjct: 21520182 cggccgccgccggcgtcgacgcacagccgc 21520211
>gb|AE005027.1| Halobacterium sp. NRC-1 section 58 of 170 of the complete genome Length = 12367 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcg 135 |||||||||||||||||||||| Sbjct: 5780 gccctggcggccgccgccggcg 5801
>dbj|AK105615.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B10, full insert sequence Length = 2184 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 cggccgccgccggcgtcgaggcccagccgc 150 ||||||||||||||||||| || ||||||| Sbjct: 2001 cggccgccgccggcgtcgacgcacagccgc 1972
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 121 cggccgccgccggcgtcgaggcccagccgc 150 ||||||||||||||||||| || ||||||| Sbjct: 21531845 cggccgccgccggcgtcgacgcacagccgc 21531874
>ref|XM_469905.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1299 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cgccctggcggccgccgccggcgtc 137 |||| |||||||||||||||||||| Sbjct: 265 cgccatggcggccgccgccggcgtc 241
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ggcggccgccgccggcgtcgaggcc 143 |||||| |||||||||||||||||| Sbjct: 2279337 ggcggctgccgccggcgtcgaggcc 2279313
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cgccctggcggccgccgccggcgtc 137 |||| |||||||||||||||||||| Sbjct: 31446034 cgccatggcggccgccgccggcgtc 31446010
>ref|XM_822505.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.4560) partial mRNA Length = 2280 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ccaccaccacaggacgaccca 27 ||||||||||||||||||||| Sbjct: 824 ccaccaccacaggacgaccca 804
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 cgccctggcggccgccgccggcgtc 137 |||| |||||||||||||||||||| Sbjct: 49766 cgccatggcggccgccgccggcgtc 49790
>gb|AC091905.3| Homo sapiens chromosome 5 clone RP11-191F9, complete sequence Length = 158741 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 ccaccacaggacgacccatctcagc 34 ||||||||||| ||||||||||||| Sbjct: 74818 ccaccacaggaagacccatctcagc 74794
>dbj|AK044749.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930039G15 product:weakly similar to NPIP-LIKE PROTEIN (FRAGMENT) [Cercopithecus aethiops], full insert sequence Length = 4196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 gcagaggagccagcagctgtc 220 ||||||||||||||||||||| Sbjct: 3491 gcagaggagccagcagctgtc 3511
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cgccctggcggccgccgccggcgtc 137 |||| |||||||||||||||||||| Sbjct: 31536550 cgccatggcggccgccgccggcgtc 31536526 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 27994451 cgtctccgacgccgacctcc 27994432
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gcgccctggcggccgccgccg 132 ||||||||||||||||||||| Sbjct: 2589622 gcgccctggcggccgccgccg 2589602
>dbj|AK108408.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G11, full insert sequence Length = 1526 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cgccctggcggccgccgccggcgtc 137 |||| |||||||||||||||||||| Sbjct: 489 cgccatggcggccgccgccggcgtc 465
>emb|CT485616.11| Mouse DNA sequence from clone RP23-14H16 on chromosome 17, complete sequence Length = 163243 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 tctcagcagtgtgcaccatct 48 ||||||||||||||||||||| Sbjct: 154741 tctcagcagtgtgcaccatct 154761
>ref|NM_177389.2| Mus musculus melanoma inhibitory activity 3 (Mia3), mRNA Length = 4196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 gcagaggagccagcagctgtc 220 ||||||||||||||||||||| Sbjct: 3491 gcagaggagccagcagctgtc 3511
>ref|NM_190238.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgccgccggcgtcgaggccc 144 |||||||||||||||||||| Sbjct: 267 cgccgccggcgtcgaggccc 286
>ref|XM_469427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 1872 cgtctccgacgccgacctcc 1891
>ref|XM_473307.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tccaggccctcggcatccgc 527 |||||||||||||||||||| Sbjct: 116 tccaggccctcggcatccgc 135
>gb|AE017134.1| Yersinia pestis biovar Medievalis str. 91001 section 8 of 16 of the complete genome Length = 290029 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgccgcgatggccgctctgg 102 |||||||||||||||||||| Sbjct: 132922 tgccgcgatggccgctctgg 132903
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tggcggccgccgccggcgtc 137 |||||||||||||||||||| Sbjct: 85991 tggcggccgccgccggcgtc 86010
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 35289 cgtctccgacgccgacctcc 35270
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10 map E20933S, complete sequence Length = 146118 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tggcggccgccgccggcgtc 137 |||||||||||||||||||| Sbjct: 138781 tggcggccgccgccggcgtc 138762
>ref|XM_581740.2| PREDICTED: Bos taurus similar to CREB-binding protein (LOC505453), mRNA Length = 4771 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 113 cgccctggcggccgccgccggcgtcgaggcccagcc 148 ||||||||| |||||| || ||||||||||||||| Sbjct: 1678 cgccctggctgccgccctcgtcgtcgaggcccagcc 1643
>gb|AY657845.1| Synthetic construct Peudomonas aeruginosa clone FLH045546.01F PA0312 gene, partial cds Length = 495 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccgccgccggcgtcgaggcc 143 |||||||||||||||||||| Sbjct: 494 ccgccgccggcgtcgaggcc 475
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tgccgcgatggccgctctgg 102 |||||||||||||||||||| Sbjct: 2402596 tgccgcgatggccgctctgg 2402615
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 125465 cgtctccgacgccgacctcc 125484
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 tgccgcgatggccgctctggtggc 106 |||||||||||| ||||||||||| Sbjct: 359330 tgccgcgatggcggctctggtggc 359353
>ref|XM_383826.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03650.1) partial mRNA Length = 1014 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 aaccagtgcatcgtcctctg 301 |||||||||||||||||||| Sbjct: 769 aaccagtgcatcgtcctctg 750
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 901038 gcggccgccgccggcgtcga 901019
>ref|XM_962096.1| PREDICTED: Tribolium castaneum similar to CG12225-PA (LOC655543), mRNA Length = 5400 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cacatcaacgcccacttcat 466 |||||||||||||||||||| Sbjct: 2901 cacatcaacgcccacttcat 2882
>emb|Z82986.1|PPZ82986 P.pratense mRNA for major allergen Phl p 5 (isovariant 618II8) Length = 1008 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtc 137 |||||||| ||||||||||||||| Sbjct: 121 gccctggccgccgccgccggcgtc 144
>emb|X74735.1|PPHLP5 P. pratense mRNA for PhlpV Length = 1192 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtc 137 |||||||| ||||||||||||||| Sbjct: 272 gccctggccgccgccgccggcgtc 295
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgccgcgatggccgctctgg 102 |||||||||||||||||||| Sbjct: 2444882 tgccgcgatggccgctctgg 2444863
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 289746 gcggccgccgccggcgtcga 289727
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tccaggccctcggcatccgc 527 |||||||||||||||||||| Sbjct: 100355 tccaggccctcggcatccgc 100336
>emb|AJ414151.1| Yersinia pestis strain CO92 complete genome; segment 11/20 Length = 334050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tgccgcgatggccgctctgg 102 |||||||||||||||||||| Sbjct: 151596 tgccgcgatggccgctctgg 151577
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 2508237 gcggccgccgccggcgtcga 2508218
>gb|AF395662.1| Aedes aegypti carbonic anhydrase mRNA, complete cds Length = 897 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 tcgttgccgcgatggccgctctggtggc 106 ||||||||||||| ||||||||| |||| Sbjct: 863 tcgttgccgcgatcgccgctctgctggc 890
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ccctggcggccgccgccggc 134 |||||||||||||||||||| Sbjct: 1204408 ccctggcggccgccgccggc 1204427
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcgaggcccagccgcc 151 ||||||||||| |||||||| ||| ||||||| Sbjct: 262 gcggccgccgctggcgtcgacgccgagccgcc 231
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 24654843 gcggccgccgccggcgtcga 24654862
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgccgccggcgtcgaggccc 144 |||||||||||||||||||| Sbjct: 85374 cgccgccggcgtcgaggccc 85393
>gb|AE004557.1| Pseudomonas aeruginosa PAO1, section 118 of 529 of the complete genome Length = 12561 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ggcgcggcagctcgttgccg 87 |||||||||||||||||||| Sbjct: 1776 ggcgcggcagctcgttgccg 1757
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 7131074 gcggccgccgccggcgtcga 7131055
>gb|AE004985.1| Halobacterium sp. NRC-1 section 16 of 170 of the complete genome Length = 10488 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccgccgccggcgtcgaggc 142 |||||||||||||||||||| Sbjct: 5204 gccgccgccggcgtcgaggc 5185
>dbj|AK121682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070B15, full insert sequence Length = 1510 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 988 cgtctccgacgccgacctcc 1007
>dbj|AK119905.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-D10, full insert sequence Length = 1750 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 1065 cgtctccgacgccgacctcc 1084
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 ggcggccgccgccggcgtcgaggc 142 ||||||||||||||||| |||||| Sbjct: 249 ggcggccgccgccggcggcgaggc 226
>dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A01, full insert sequence Length = 1199 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tggcggccgccgccggcgtc 137 |||||||||||||||||||| Sbjct: 48 tggcggccgccgccggcgtc 67
>dbj|AK105398.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-C05, full insert sequence Length = 1639 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 961 cgtctccgacgccgacctcc 980
>dbj|AK101602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051K11, full insert sequence Length = 1510 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 626 gcggccgccgccggcgtcga 607
>dbj|AK100268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065A22, full insert sequence Length = 1839 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgccgccggcgtcgaggccc 144 |||||||||||||||||||| Sbjct: 442 cgccgccggcgtcgaggccc 461
>dbj|AK070097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041P12, full insert sequence Length = 1464 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgccgccggcgtcgaggccc 144 |||||||||||||||||||| Sbjct: 468 cgccgccggcgtcgaggccc 487
>dbj|AK065842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D04, full insert sequence Length = 1216 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tccaggccctcggcatccgc 527 |||||||||||||||||||| Sbjct: 144 tccaggccctcggcatccgc 163
>dbj|AK064396.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G07, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 637 gcggccgccgccggcgtcga 618
>dbj|AK063307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F11, full insert sequence Length = 1689 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 cgtctccgacgccgacctcc 447 |||||||||||||||||||| Sbjct: 461 cgtctccgacgccgacctcc 442
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 24583049 gcggccgccgccggcgtcga 24583068
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gcggccgccgccggcgtcga 139 |||||||||||||||||||| Sbjct: 99709 gcggccgccgccggcgtcga 99728
>gb|AF061069.1|AF061069 Phleum pratense clone 10030 major allergen Phl p 5 mRNA, partial cds Length = 831 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtc 137 |||||||| ||||||||||||||| Sbjct: 121 gccctggccgccgccgccggcgtc 144
>gb|AF061068.1|AF061068 Phleum pratense clone 10029 major allergen Phl p 5 mRNA, partial cds Length = 831 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtc 137 |||||||| ||||||||||||||| Sbjct: 121 gccctggccgccgccgccggcgtc 144
>gb|AF061067.1|AF061067 Phleum pratense clone 10027 major allergen Phl p 5 mRNA, partial cds Length = 831 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtc 137 |||||||| ||||||||||||||| Sbjct: 121 gccctggccgccgccgccggcgtc 144
>gb|AF061066.1|AF061066 Phleum pratense clone 10022 major allergen Phl p 5 mRNA, partial cds Length = 831 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gccctggcggccgccgccggcgtc 137 |||||||| ||||||||||||||| Sbjct: 121 gccctggccgccgccgccggcgtc 144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,401,522 Number of Sequences: 3902068 Number of extensions: 4401522 Number of successful extensions: 94355 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92161 Number of HSP's gapped (non-prelim): 2186 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
