Clone Name | bart27e09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1307 Score = 498 bits (251), Expect = e-137 Identities = 425/483 (87%) Strand = Plus / Plus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 249 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 308 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 309 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 368 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 369 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 428 Query: 251 ggccaacaagaacccgctcgtccccaggatgtttggttctgtgaatgacatattttgcct 310 ||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||| ||||| Sbjct: 429 ggccaaccagagccccctcgtccccaggttgtttggtgctgtgaatgacatattctgcct 488 Query: 311 gttccaaggacatgttgagaacattggcaacctgaagcaacactacggtctgagcaagac 370 |||||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 489 gttccaaggacacattgagaacattgccagtctgaagcaacactatggtctgagcaagac 548 Query: 371 agcaaatgaggttaccatcctgattgaggcctacagaaccctccgggacaggggccctct 430 ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 549 agcaactgaggttaccatcctgattgaggcctacaggaccctcagggacaggggccctct 608 Query: 431 cccagccagccaggtcgtgagagatctcagtggacggtttgctttcatcctgtacgacac 490 |||||| || |||||||||||||||||||| || ||| | ||||||||||| ||||| Sbjct: 609 cccagctagtcaggtcgtgagagatctcagcgggaagttcacgttcatcctgtatgacac 668 Query: 491 ggtgtcgaaatccaccttcgtcgctgctgatgctgatggcagtatccccttcttctgggg 550 |||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 669 tctgtcaaaatccaccttcgttgctgcagatgctgatggtagcattcctttcttctgggg 728 Query: 551 cgt 553 ||| Sbjct: 729 cgt 731
>dbj|AB110189.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 17FPG011 Length = 1129 Score = 498 bits (251), Expect = e-137 Identities = 425/483 (87%) Strand = Plus / Plus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 68 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 127 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 128 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 187 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 188 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 247 Query: 251 ggccaacaagaacccgctcgtccccaggatgtttggttctgtgaatgacatattttgcct 310 ||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||| ||||| Sbjct: 248 ggccaaccagagccccctcgtccccaggttgtttggtgctgtgaatgacatattctgcct 307 Query: 311 gttccaaggacatgttgagaacattggcaacctgaagcaacactacggtctgagcaagac 370 |||||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 308 gttccaaggacacattgagaacattgccagtctgaagcaacactatggtctgagcaagac 367 Query: 371 agcaaatgaggttaccatcctgattgaggcctacagaaccctccgggacaggggccctct 430 ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 368 agcaactgaggttaccatcctgattgaggcctacaggaccctcagggacaggggccctct 427 Query: 431 cccagccagccaggtcgtgagagatctcagtggacggtttgctttcatcctgtacgacac 490 |||||| || |||||||||||||||||||| || ||| | ||||||||||| ||||| Sbjct: 428 cccagctagtcaggtcgtgagagatctcagcgggaagttcacgttcatcctgtatgacac 487 Query: 491 ggtgtcgaaatccaccttcgtcgctgctgatgctgatggcagtatccccttcttctgggg 550 |||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 488 tctgtcaaaatccaccttcgttgctgcagatgctgatggtagcattcctttcttctgggg 547 Query: 551 cgt 553 ||| Sbjct: 548 cgt 550
>dbj|AK065730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037C05, full insert sequence Length = 1111 Score = 498 bits (251), Expect = e-137 Identities = 425/483 (87%) Strand = Plus / Plus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 71 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 130 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 131 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 190 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 191 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 250 Query: 251 ggccaacaagaacccgctcgtccccaggatgtttggttctgtgaatgacatattttgcct 310 ||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||| ||||| Sbjct: 251 ggccaaccagagccccctcgtccccaggttgtttggtgctgtgaatgacatattctgcct 310 Query: 311 gttccaaggacatgttgagaacattggcaacctgaagcaacactacggtctgagcaagac 370 |||||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 311 gttccaaggacacattgagaacattgccagtctgaagcaacactatggtctgagcaagac 370 Query: 371 agcaaatgaggttaccatcctgattgaggcctacagaaccctccgggacaggggccctct 430 ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 371 agcaactgaggttaccatcctgattgaggcctacaggaccctcagggacaggggccctct 430 Query: 431 cccagccagccaggtcgtgagagatctcagtggacggtttgctttcatcctgtacgacac 490 |||||| || |||||||||||||||||||| || ||| | ||||||||||| ||||| Sbjct: 431 cccagctagtcaggtcgtgagagatctcagcgggaagttcacgttcatcctgtatgacac 490 Query: 491 ggtgtcgaaatccaccttcgtcgctgctgatgctgatggcagtatccccttcttctgggg 550 |||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 491 tctgtcaaaatccaccttcgttgctgcagatgctgatggtagcattcctttcttctgggg 550 Query: 551 cgt 553 ||| Sbjct: 551 cgt 553
>dbj|AK060366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A05, full insert sequence Length = 1394 Score = 498 bits (251), Expect = e-137 Identities = 425/483 (87%) Strand = Plus / Plus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 352 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 411 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 412 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 471 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 472 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 531 Query: 251 ggccaacaagaacccgctcgtccccaggatgtttggttctgtgaatgacatattttgcct 310 ||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||| ||||| Sbjct: 532 ggccaaccagagccccctcgtccccaggttgtttggtgctgtgaatgacatattctgcct 591 Query: 311 gttccaaggacatgttgagaacattggcaacctgaagcaacactacggtctgagcaagac 370 |||||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 592 gttccaaggacacattgagaacattgccagtctgaagcaacactatggtctgagcaagac 651 Query: 371 agcaaatgaggttaccatcctgattgaggcctacagaaccctccgggacaggggccctct 430 ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 652 agcaactgaggttaccatcctgattgaggcctacaggaccctcagggacaggggccctct 711 Query: 431 cccagccagccaggtcgtgagagatctcagtggacggtttgctttcatcctgtacgacac 490 |||||| || |||||||||||||||||||| || ||| | ||||||||||| ||||| Sbjct: 712 cccagctagtcaggtcgtgagagatctcagcgggaagttcacgttcatcctgtatgacac 771 Query: 491 ggtgtcgaaatccaccttcgtcgctgctgatgctgatggcagtatccccttcttctgggg 550 |||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 772 tctgtcaaaatccaccttcgttgctgcagatgctgatggtagcattcctttcttctgggg 831 Query: 551 cgt 553 ||| Sbjct: 832 cgt 834
>gb|AY105257.1| Zea mays PCO119343 mRNA sequence Length = 1188 Score = 341 bits (172), Expect = 1e-90 Identities = 413/492 (83%), Gaps = 6/492 (1%) Strand = Plus / Plus Query: 68 cgagatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagccc 127 |||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||| Sbjct: 118 cgagatgctggcggtgttcgatcccacggtggccaagtgcccggagggtctccgcagccc 177 Query: 128 gccggcggccggaggggcggtgggag---gcgg---cggcgcggccgcgctgatgaaggg 181 |||| ||||| | ||| | |||| |||| ||| |||| ||||||||||||||| Sbjct: 178 cccggtcgccggggcggccgctggagcaggcggggccggtgcgggcgcgctgatgaaggg 237 Query: 182 cttcgccgacgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgc 241 |||| ||||| | |||||| ||| |||||||||||||| ||| || ||||||| || || Sbjct: 238 cttctccgactcgcacgacggcgccgtcaccgtcagcctgggcccctccggcgcgctggc 297 Query: 242 ctactcctcggccaacaagaacccgctcgtccccaggatgtttggttctgtgaatgacat 301 |||||| |||||||| ||| ||| ||||| || ||| |||||||| ||||||||||||| Sbjct: 298 ctactcggcggccaaccagagccccctcgtgccaaggttgtttggtgctgtgaatgacat 357 Query: 302 attttgcctgttccaaggacatgttgagaacattggcaacctgaagcaacactacggtct 361 || ||| |||||||||| ||| |||||||||||| |||||||||||| || || || || Sbjct: 358 cttctgcttgttccaagggcatattgagaacattgccaacctgaagcagcattatggcct 417 Query: 362 gagcaagacagcaaatgaggttaccatcctgattgaggcctacagaaccctccgggacag 421 ||||||||| ||||||||||| || ||||| || ||||||||||| ||||| ||||||| Sbjct: 418 gagcaagactgcaaatgaggtgactatcctcatagaggcctacaggaccctgagggacag 477 Query: 422 gggccctctcccagccagccaggtcgtgagagatctcagtggacggtttgctttcatcct 481 ||||||| |||||||||||||||| |||||||| || ||||| ||| || |||||||| Sbjct: 478 gggccctgtcccagccagccaggttgtgagagaccttagtgggaagttcgcgttcatcct 537 Query: 482 gtacgacacggtgtcgaaatccaccttcgtcgctgctgatgctgatggcagtatcccctt 541 ||| ||||| ||||||| || ||||| || |||||||| |||||||| || ||||| || Sbjct: 538 gtatgacaccctgtcgaagtctacctttgttgctgctgacgctgatggtagcatcccttt 597 Query: 542 cttctggggcgt 553 |||||||||||| Sbjct: 598 cttctggggcgt 609
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 280 bits (141), Expect = 5e-72 Identities = 219/245 (89%) Strand = Plus / Minus Query: 273 cccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgttgagaac 332 |||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 30269387 cccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacattgagaac 30269328 Query: 333 attggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttaccatcctg 392 |||| || |||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 30269327 attgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttaccatcctg 30269268 Query: 393 attgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtcgtgaga 452 |||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||| Sbjct: 30269267 attgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggtcgtgaga 30269208 Query: 453 gatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccaccttcgtc 512 |||||||| || ||| | ||||||||||| ||||| |||| |||||||||||||| Sbjct: 30269207 gatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccaccttcgtt 30269148 Query: 513 gctgc 517 ||||| Sbjct: 30269147 gctgc 30269143 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Minus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 30271145 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 30271086 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 30271085 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 30271026 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 30271025 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 30270966 Query: 251 ggccaacaagaacccgctcgtccccagg 278 ||||||| ||| ||| |||||||||||| Sbjct: 30270965 ggccaaccagagccccctcgtccccagg 30270938 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gggcggtgggaggcggcggcgcggccgcgc 171 |||||| ||| ||||||||||||||||||| Sbjct: 14420932 gggcggcgggcggcggcggcgcggccgcgc 14420903 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 7473104 ggtgggaggcggcggcgcggc 7473124
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 280 bits (141), Expect = 5e-72 Identities = 219/245 (89%) Strand = Plus / Minus Query: 273 cccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgttgagaac 332 |||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 61067 cccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacattgagaac 61008 Query: 333 attggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttaccatcctg 392 |||| || |||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 61007 attgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttaccatcctg 60948 Query: 393 attgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtcgtgaga 452 |||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||| Sbjct: 60947 attgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggtcgtgaga 60888 Query: 453 gatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccaccttcgtc 512 |||||||| || ||| | ||||||||||| ||||| |||| |||||||||||||| Sbjct: 60887 gatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccaccttcgtt 60828 Query: 513 gctgc 517 ||||| Sbjct: 60827 gctgc 60823 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Minus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 62825 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 62766 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 62765 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 62706 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 62705 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 62646 Query: 251 ggccaacaagaacccgctcgtccccagg 278 ||||||| ||| ||| |||||||||||| Sbjct: 62645 ggccaaccagagccccctcgtccccagg 62618
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 280 bits (141), Expect = 5e-72 Identities = 219/245 (89%) Strand = Plus / Minus Query: 273 cccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgttgagaac 332 |||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 30360809 cccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacattgagaac 30360750 Query: 333 attggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttaccatcctg 392 |||| || |||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 30360749 attgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttaccatcctg 30360690 Query: 393 attgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtcgtgaga 452 |||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||| Sbjct: 30360689 attgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggtcgtgaga 30360630 Query: 453 gatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccaccttcgtc 512 |||||||| || ||| | ||||||||||| ||||| |||| |||||||||||||| Sbjct: 30360629 gatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccaccttcgtt 30360570 Query: 513 gctgc 517 ||||| Sbjct: 30360569 gctgc 30360565 Score = 198 bits (100), Expect = 1e-47 Identities = 181/208 (87%) Strand = Plus / Minus Query: 71 gatgctggccgtgttcgaccagacggtggccaagtgcccggagggcctccgcagcccgcc 130 |||| |||| ||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 30362567 gatgttggcggtgtttgatccgacggtggccaagtgcccggagggcctccggagcccgcc 30362508 Query: 131 ggcggccggaggggcggtgggaggcggcggcgcggccgcgctgatgaagggcttcgccga 190 || |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 30362507 ggtggccggcggcgccgtggcggccggcggcgcgggcgcgctgatgaagggcttcgccgg 30362448 Query: 191 cgccaacgacgccgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctc 250 || ||| || |||||||||||||||||| ||| |||||||||||||||||||||| | Sbjct: 30362447 agcgcacgccgacgcggtcaccgtcagcctgggccccgccggcgccctcgcctactcggc 30362388 Query: 251 ggccaacaagaacccgctcgtccccagg 278 ||||||| ||| ||| |||||||||||| Sbjct: 30362387 ggccaaccagagccccctcgtccccagg 30362360 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gggcggtgggaggcggcggcgcggccgcgc 171 |||||| ||| ||||||||||||||||||| Sbjct: 14415907 gggcggcgggcggcggcggcgcggccgcgc 14415878 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 7470939 ggtgggaggcggcggcgcggc 7470959
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcgc 171 |||||||||||||||| |||||||||||| Sbjct: 2029590 ggcggtgggaggcggctgcgcggccgcgc 2029562 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gggcggtgggaggcggcggcgcggccgcgc 171 |||||| ||| ||||||||||||||||||| Sbjct: 2029534 gggcggcgggtggcggcggcgcggccgcgc 2029505 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcg 170 ||||| ||| |||||||||||||||||| Sbjct: 6551426 ggcggcgggcggcggcggcgcggccgcg 6551399 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggc 166 ||||||||| |||||||||||||| Sbjct: 6551366 ggcggtgggcggcggcggcgcggc 6551343
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcgc 171 |||||||||||||||| |||||||||||| Sbjct: 79798 ggcggtgggaggcggctgcgcggccgcgc 79770 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gggcggtgggaggcggcggcgcggccgcgc 171 |||||| ||| ||||||||||||||||||| Sbjct: 79742 gggcggcgggtggcggcggcgcggccgcgc 79713
>gb|BT018507.1| Zea mays clone EL01N0428E04.d mRNA sequence Length = 1088 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Plus Query: 203 cgcggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaa 262 |||||||||||||| ||| ||| |||||||||| || | ||||||| |||| |||| Sbjct: 239 cgcggtcaccgtcaaccttggcgggtccggcgccctggcgttctcctcgagcaaccagaa 298 Query: 263 cccgctcgtccccaggatgtttgg 286 ||| ||| |||||||| ||||||| Sbjct: 299 ccccctcctccccaggttgtttgg 322
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 64 gcgccgagatgctggccgtgttc 86 ||||||||||||||||||||||| Sbjct: 4080390 gcgccgagatgctggccgtgttc 4080412 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 gtgggaggcggcggcgcggccg 168 |||||||||||||||||||||| Sbjct: 4104605 gtgggaggcggcggcgcggccg 4104584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ggcggcggcgcggccgcgctg 173 ||||||||||||||||||||| Sbjct: 4055582 ggcggcggcgcggccgcgctg 4055602 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gcggcggcgcggccgcgctg 173 |||||||||||||||||||| Sbjct: 4180287 gcggcggcgcggccgcgctg 4180268
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 tcgccgacgccaacgacgccgcg 206 ||||||||||||||||||||||| Sbjct: 4376189 tcgccgacgccaacgacgccgcg 4376167 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 ggggcggtgggaggcggcggcgcggccg 168 |||||||||||| |||||||||||||| Sbjct: 4219793 ggggcggtgggacacggcggcgcggccg 4219820
>ref|XM_470672.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gggcggtgggaggcggcggcgcggccgcgc 171 |||||| ||| ||||||||||||||||||| Sbjct: 34 gggcggcgggcggcggcggcgcggccgcgc 5
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 tcgccgacgccaacgacgccgc 205 |||||||||||||||||||||| Sbjct: 252799 tcgccgacgccaacgacgccgc 252778
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds Length = 70631 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gccaacgacgccgcggtcaccg 213 |||||||||||||||||||||| Sbjct: 41589 gccaacgacgccgcggtcaccg 41610
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cggaggggcggtgggaggcggcggcg 162 ||||||||||||||| |||||||||| Sbjct: 7043299 cggaggggcggtgggtggcggcggcg 7043274
>gb|AF302091.1|AF302091 Rattus norvegicus kidney-type glutaminase gene, promoter and partial cds Length = 3052 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 141 ggggcggtgggaggcggcggcgcggc 166 ||||||||||| |||||||||||||| Sbjct: 2871 ggggcggtgggcggcggcggcgcggc 2896
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcgcggccgcgc 171 |||||| ||| ||||||||||||||||||| Sbjct: 120449 gggcggcgggcggcggcggcgcggccgcgc 120478
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 484 acgacacggtgtcgaaatccaccttc 509 ||||||||||||||| |||||||||| Sbjct: 38451 acgacacggtgtcgagatccaccttc 38426
>dbj|AB084235.1| Terrabacter sp. DBF63 ISTesp2 and phthalate catabolic gene cluster (phtA1, phtA2, ORF11, phtB, phtA3, phtA4, phtC, phtR), complete cds Length = 8684 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gccaacgacgccgcggtcaccg 213 |||||||||||||||||||||| Sbjct: 5038 gccaacgacgccgcggtcaccg 5059
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cggaggggcggtgggaggcggcggcg 162 ||||||||||||||| |||||||||| Sbjct: 64086 cggaggggcggtgggtggcggcggcg 64061
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cggaggggcggtgggaggcggcggcg 162 ||||||||||||||| |||||||||| Sbjct: 102726 cggaggggcggtgggtggcggcggcg 102701
>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence Length = 23480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 17185 ggtgggaggcggcggcgcggc 17205
>ref|XM_518923.1| PREDICTED: Pan troglodytes similar to Chromosome 6 open reading frame 117 (LOC463208), mRNA Length = 645 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcg 162 ||||||||||||||||||||| Sbjct: 301 gggcggtgggaggcggcggcg 321
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 tcagtggacggtttgctttca 477 ||||||||||||||||||||| Sbjct: 264105 tcagtggacggtttgctttca 264125
>gb|AC159441.1| Trypanosoma brucei chromosome 5 clone RPCI93-30F7, complete sequence Length = 101712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 tcagtggacggtttgctttca 477 ||||||||||||||||||||| Sbjct: 26061 tcagtggacggtttgctttca 26041
>gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8, complete sequence Length = 140539 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 tcagtggacggtttgctttca 477 ||||||||||||||||||||| Sbjct: 129421 tcagtggacggtttgctttca 129401
>ref|XM_610919.2| PREDICTED: Bos taurus similar to ankyrin repeat domain 9 (LOC532402), mRNA Length = 801 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 aggcggcggcgcggccgcgct 172 ||||||||||||||||||||| Sbjct: 208 aggcggcggcgcggccgcgct 188
>gb|BC010003.2| Homo sapiens chromosome 6 open reading frame 117, mRNA (cDNA clone MGC:16762 IMAGE:4134852), complete cds Length = 2172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcg 162 ||||||||||||||||||||| Sbjct: 31 gggcggtgggaggcggcggcg 51
>ref|NM_138409.1| Homo sapiens chromosome 6 open reading frame 117 (C6orf117), mRNA Length = 2207 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcg 162 ||||||||||||||||||||| Sbjct: 86 gggcggtgggaggcggcggcg 106
>ref|XM_819309.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 hypothetical protein (Tb927.5.770) partial mRNA Length = 2181 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 tcagtggacggtttgctttca 477 ||||||||||||||||||||| Sbjct: 490 tcagtggacggtttgctttca 510
>ref|XM_860004.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading frame 30, transcript variant 5 (LOC474593), mRNA Length = 2450 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ctgtgaatgacatattttgcc 309 ||||||||||||||||||||| Sbjct: 926 ctgtgaatgacatattttgcc 946
>ref|XM_859988.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading frame 30, transcript variant 4 (LOC474593), mRNA Length = 2438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ctgtgaatgacatattttgcc 309 ||||||||||||||||||||| Sbjct: 932 ctgtgaatgacatattttgcc 952
>ref|XM_859968.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading frame 30, transcript variant 3 (LOC474593), mRNA Length = 2271 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ctgtgaatgacatattttgcc 309 ||||||||||||||||||||| Sbjct: 920 ctgtgaatgacatattttgcc 940
>ref|XM_859951.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading frame 30, transcript variant 2 (LOC474593), mRNA Length = 2354 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ctgtgaatgacatattttgcc 309 ||||||||||||||||||||| Sbjct: 920 ctgtgaatgacatattttgcc 940
>ref|XM_531822.2| PREDICTED: Canis familiaris similar to chromosome 2 open reading frame 30, transcript variant 1 (LOC474593), mRNA Length = 2446 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ctgtgaatgacatattttgcc 309 ||||||||||||||||||||| Sbjct: 920 ctgtgaatgacatattttgcc 940
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 111659 ggtgggaggcggcggcgcggc 111679
>ref|XM_547987.2| PREDICTED: Canis familiaris similar to ankyrin repeat domain 9 (LOC490865), mRNA Length = 1926 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 aggcggcggcgcggccgcgct 172 ||||||||||||||||||||| Sbjct: 1075 aggcggcggcgcggccgcgct 1055
>emb|AL161621.11| Human DNA sequence from clone RP11-51G5 on chromosome 6 Contains two novel genes and a CpG island, complete sequence Length = 96715 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcg 162 ||||||||||||||||||||| Sbjct: 14109 gggcggtgggaggcggcggcg 14129
>emb|CR609200.1| full-length cDNA clone CS0DF036YK22 of Fetal brain of Homo sapiens (human) Length = 1795 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcg 162 ||||||||||||||||||||| Sbjct: 58 gggcggtgggaggcggcggcg 78
>dbj|AK090775.1| Homo sapiens cDNA FLJ33456 fis, clone BRAMY2000388 Length = 2207 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggcggtgggaggcggcggcg 162 ||||||||||||||||||||| Sbjct: 86 gggcggtgggaggcggcggcg 106
>dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830210F09 product:weakly similar to Putative L-lactate dehydrogenase (EC 1.1.2.3) [Bordetella parapertussis], full insert sequence Length = 7735 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcggcgcggccgcgctgatga 177 ||||||||||||||||||||| Sbjct: 3481 gcggcgcggccgcgctgatga 3461
>gb|AC005546.1|AC005546 Homo sapiens chromosome 19, cosmid R29425, complete sequence Length = 41172 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 aggggccctctcccagccagccagg 444 ||||||||||| ||||||||||||| Sbjct: 20356 aggggccctctgccagccagccagg 20332
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 tcgtcgctgctgatgctgatg 528 ||||||||||||||||||||| Sbjct: 18944503 tcgtcgctgctgatgctgatg 18944483
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11, complete sequence Length = 113049 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 2000 ggtgggaggcggcggcgcggc 2020
>dbj|AK111568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L11, full insert sequence Length = 1785 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 263 ggtgggaggcggcggcgcggc 243
>dbj|AK098994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096B20, full insert sequence Length = 1758 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ggtgggaggcggcggcgcggc 166 ||||||||||||||||||||| Sbjct: 263 ggtgggaggcggcggcgcggc 243
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 gccgacgccaacgacgccgcg 206 ||||||||||||||||||||| Sbjct: 5594891 gccgacgccaacgacgccgcg 5594871
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 gcggcggcgcggccgcgctga 174 ||||||||||||||||||||| Sbjct: 2142118 gcggcggcgcggccgcgctga 2142098 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gcggcggcgcggccgcgctg 173 |||||||||||||||||||| Sbjct: 2329686 gcggcggcgcggccgcgctg 2329667
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 tcgtcgctgctgatgctgatg 528 ||||||||||||||||||||| Sbjct: 18870730 tcgtcgctgctgatgctgatg 18870710
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 tcgtcgctgctgatgctgatg 528 ||||||||||||||||||||| Sbjct: 25876 tcgtcgctgctgatgctgatg 25896
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 tcgtcgctgctgatgctgatg 528 ||||||||||||||||||||| Sbjct: 40620 tcgtcgctgctgatgctgatg 40600
>ref|NM_113185.2| Arabidopsis thaliana unknown protein AT3G22850 mRNA, complete cds Length = 991 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gaggttaccatcctgattgaggcctacagaac 409 ||||||||||| ||||||| ||||||||||| Sbjct: 365 gaggttaccattgtgattgaagcctacagaac 396
>ref|XM_482383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcggtgggaggcggcggcgc 163 |||||||||||||||||||| Sbjct: 761 gcggtgggaggcggcggcgc 780
>ref|NM_190680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gccgacgccaacgacgccgc 205 |||||||||||||||||||| Sbjct: 355 gccgacgccaacgacgccgc 374
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ggtgggaggcggcggcgcgg 165 |||||||||||||||||||| Sbjct: 117330 ggtgggaggcggcggcgcgg 117349
>ref|XM_414939.1| PREDICTED: Gallus gallus similar to DKFZP564K2062 protein (LOC416641), mRNA Length = 787 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ggcggcggcgcggccgcgct 172 |||||||||||||||||||| Sbjct: 17 ggcggcggcgcggccgcgct 36
>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence Length = 153520 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 acatgttgagaacattggca 339 |||||||||||||||||||| Sbjct: 47326 acatgttgagaacattggca 47345
>gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosome 12, complete sequence Length = 189420 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agcaagacagcaaatgaggt 382 |||||||||||||||||||| Sbjct: 75335 agcaagacagcaaatgaggt 75354
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccgcagcccgccggcggccg 138 |||||||||||||||||||| Sbjct: 275569 ccgcagcccgccggcggccg 275588
>gb|AC144489.2| Gasterosteus aculeatus clone CH213-2D11, complete sequence Length = 228976 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ctccgcagcccgccggcggccgga 140 ||||||||||| |||||||||||| Sbjct: 95388 ctccgcagccctccggcggccgga 95365
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgccggcgccctcgcctact 246 |||||||||||||||||||| Sbjct: 6279549 cgccggcgccctcgcctact 6279568
>dbj|AB239770.1| Chlamydomonas reinhardtii CrDES mRNA for omega13 fatty acid desaturase, complete cds Length = 3154 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 gcggcgcggccgcgctgatgaagggcttcgccgacgccaa 196 |||||| |||||||| || ||||||| |||||||||||| Sbjct: 939 gcggcgtggccgcgcagaagaagggcaccgccgacgccaa 978
>dbj|AB239769.1| Chlamydomonas reinhardtii CrDES gene for omega13 fatty acid desaturase, complete cds Length = 4315 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 gcggcgcggccgcgctgatgaagggcttcgccgacgccaa 196 |||||| |||||||| || ||||||| |||||||||||| Sbjct: 939 gcggcgtggccgcgcagaagaagggcaccgccgacgccaa 978
>gb|AY114623.1| Arabidopsis thaliana unknown protein (At3g22850) mRNA, complete cds Length = 813 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gaggttaccatcctgattgaggcctacagaac 409 ||||||||||| ||||||| ||||||||||| Sbjct: 301 gaggttaccattgtgattgaagcctacagaac 332
>gb|AY072385.1| Arabidopsis thaliana unknown protein (At3g22850) mRNA, complete cds Length = 991 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gaggttaccatcctgattgaggcctacagaac 409 ||||||||||| ||||||| ||||||||||| Sbjct: 365 gaggttaccattgtgattgaagcctacagaac 396
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 ggcggcggcgcggccgcgctgatg 176 ||||||||||| |||||||||||| Sbjct: 1938887 ggcggcggcgccgccgcgctgatg 1938864
>gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, complete sequence Length = 255105 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ttctgtgaatgacatatttt 306 |||||||||||||||||||| Sbjct: 72677 ttctgtgaatgacatatttt 72658
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 gggaggcggcggcgcggccgcgct 172 ||||||||||| |||||||||||| Sbjct: 1045336 gggaggcggcgacgcggccgcgct 1045313
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcggtgggaggcggcggcgc 163 |||||||||||||||||||| Sbjct: 19739092 gcggtgggaggcggcggcgc 19739111
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcg 170 ||||| ||| |||||||||||||||||| Sbjct: 23534178 ggcggcgggcggcggcggcgcggccgcg 23534151 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcg 170 ||||| ||| |||||||||||||||||| Sbjct: 18808462 ggcggcgggcggcggcggcgcggccgcg 18808435
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gccgacgccaacgacgccgc 205 |||||||||||||||||||| Sbjct: 37082611 gccgacgccaacgacgccgc 37082630
>emb|BX824717.1|CNS0A5KO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gaggttaccatcctgattgaggcctacagaac 409 ||||||||||| ||||||| ||||||||||| Sbjct: 351 gaggttaccattgtgattgaagcctacagaac 382
>emb|BX825268.1|CNS0A58K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL24ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 931 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gaggttaccatcctgattgaggcctacagaac 409 ||||||||||| ||||||| ||||||||||| Sbjct: 344 gaggttaccattgtgattgaagcctacagaac 375
>emb|BX930302.1| Gallus gallus finished cDNA, clone ChEST586n20 Length = 715 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gcggcggcgcggccgcgctg 173 |||||||||||||||||||| Sbjct: 103 gcggcggcgcggccgcgctg 84
>gb|AE004910.1| Pseudomonas aeruginosa PAO1, section 471 of 529 of the complete genome Length = 14999 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gccgacgccaacgacgccgc 205 |||||||||||||||||||| Sbjct: 3882 gccgacgccaacgacgccgc 3863
>gb|AE004520.1| Pseudomonas aeruginosa PAO1, section 81 of 529 of the complete genome Length = 12217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gaagggcttcgccgacgcca 195 |||||||||||||||||||| Sbjct: 5620 gaagggcttcgccgacgcca 5601
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gccgacgccaacgacgccgc 205 |||||||||||||||||||| Sbjct: 83752 gccgacgccaacgacgccgc 83771
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 153 ggcggcggcgcggccgcgctgatgaagg 180 |||||||||||||||||| || |||||| Sbjct: 6029854 ggcggcggcgcggccgcggtgttgaagg 6029827
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 ccgacgccaacgacgccgcggtca 210 ||||||||| |||||||||||||| Sbjct: 2992422 ccgacgccaccgacgccgcggtca 2992445
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcg 170 ||||| ||| |||||||||||||||||| Sbjct: 112039 ggcggcgggcggcggcggcgcggccgcg 112012 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggc 166 ||||||||| |||||||||||||| Sbjct: 111979 ggcggtgggcggcggcggcgcggc 111956
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcggtgggaggcggcggcgc 163 |||||||||||||||||||| Sbjct: 68043 gcggtgggaggcggcggcgc 68062
>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5 Length = 71327 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 gaggttaccatcctgattgaggcctacagaac 409 ||||||||||| ||||||| ||||||||||| Sbjct: 1584 gaggttaccattgtgattgaagcctacagaac 1615
>dbj|AK106356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A06, full insert sequence Length = 1491 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcggtgggaggcggcggcgc 163 |||||||||||||||||||| Sbjct: 761 gcggtgggaggcggcggcgc 780
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ggaggcggcggcgcggccgc 169 |||||||||||||||||||| Sbjct: 174567 ggaggcggcggcgcggccgc 174586
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ggcggcggcgcggccgcgct 172 |||||||||||||||||||| Sbjct: 1370105 ggcggcggcgcggccgcgct 1370124
>gb|AF051092.1|AF051092 Xanthomonas campestris restriction endonuclease R.XbaI (xbaIR) and DNA modification methyltransferase M.XbaI (xbaIM) genes, complete cds; and transposase gene, partial cds Length = 3141 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctgtacgacacggtgtcga 498 |||||||||||||||||||| Sbjct: 2974 cctgtacgacacggtgtcga 2993
>gb|AC149219.4| Mus musculus BAC clone RP24-91L19 from 19, complete sequence Length = 205546 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 atgttgagaacattggcaac 341 |||||||||||||||||||| Sbjct: 118407 atgttgagaacattggcaac 118426
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tgctggccgtgttcgaccag 92 |||||||||||||||||||| Sbjct: 2139621 tgctggccgtgttcgaccag 2139602
>gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosome 16, complete sequence Length = 187085 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 295 atgacatattttgcctgttccaaggaca 322 |||||| || |||||||||||||||||| Sbjct: 109127 atgacacatgttgcctgttccaaggaca 109100
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcg 170 ||||| ||| |||||||||||||||||| Sbjct: 71350 ggcggcgggcggcggcggcgcggccgcg 71323
>gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07, complete sequence Length = 71145 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 ggcggtgggaggcggcggcgcggccgcg 170 ||||| ||| |||||||||||||||||| Sbjct: 30828 ggcggcgggcggcggcggcgcggccgcg 30801
>dbj|AB024973.1| Streptomyces tauricus gene for ketosynthase, partial cds Length = 1179 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgtcagcctcggctccgccg 231 |||||||||||||||||||| Sbjct: 276 cgtcagcctcggctccgccg 295
>dbj|AB024972.1| Streptomyces capoamus gene for ketosynthase, partial cds Length = 1179 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgtcagcctcggctccgccg 231 |||||||||||||||||||| Sbjct: 276 cgtcagcctcggctccgccg 295 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,962,347 Number of Sequences: 3902068 Number of extensions: 3962347 Number of successful extensions: 106279 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 102115 Number of HSP's gapped (non-prelim): 4160 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)