ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27d12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480881.1| Oryza sativa (japonica cultivar-group), mRNA Length = 840 Score = 121 bits (61), Expect = 2e-24 Identities = 189/231 (81%), Gaps = 3/231 (1%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacg---agaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| ||| || |||||| |||| |||| || Sbjct: 111 cgacaacccgccggagctgacggccgacggcgacggtgaggccggcgtggtcatcgatga 170 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcct 263 |||||| |||||| |||||| ||||||||||||| | | ||| | ||||| || |||| Sbjct: 171 cctggcaggcttcccggcctatgtcaccggcgacgtccactccggccgggccatcatcct 230 Query: 264 cgcctccgatttctacggattccaagcgccattgttgaggaaaattgccgacaaagtcgg 323 |||||||| |||| |||||| |||| |||||| ||||| | | ||| |||||||| || Sbjct: 231 ggcctccgacatctatggattcgaagcaccattgctgagggacaatgctgacaaagttgg 290 Query: 324 tgaagctggatactacgttgtggtgcccgacttcttcaatggacaacctta 374 ||||||||| || ||||||||||| || || |||||| ||||||||||||| Sbjct: 291 tgaagctgggtattacgttgtggtacctgatttcttccatggacaacctta 341 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 412 cactctccggtaaaagccgctcaagatgctaaaccaat 449 ||||||||||||||||| ||| ||||||||||| |||| Sbjct: 385 cactctccggtaaaagcagctgaagatgctaaatcaat 422
>dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G07, full insert sequence Length = 938 Score = 119 bits (60), Expect = 9e-24 Identities = 162/196 (82%) Strand = Plus / Plus Query: 152 acccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccg 211 ||||||||||| | | ||||||||| |||| |||||| ||||||| |||||||||| | Sbjct: 110 acccgccggacatgaaggccggcggcggcgaggccggcgtggtcgtccacgacctggcgg 169 Query: 212 gcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccg 271 ||| | |||||||||||||||||| |||| | ||| | ||||| ||||||||||||||| Sbjct: 170 gctacgaggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccg 229 Query: 272 atttctacggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctg 331 | ||||||| ||||||||||| || ||||| |||| || || ||||| ||||| || | Sbjct: 230 acgtctacggtttccaagcgccgttactgaggcaaatagctgataaagttggtgatgccg 289 Query: 332 gatactacgttgtggt 347 |||| ||||| ||||| Sbjct: 290 gatattacgtcgtggt 305
>dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100O03, full insert sequence Length = 896 Score = 119 bits (60), Expect = 9e-24 Identities = 162/196 (82%) Strand = Plus / Plus Query: 152 acccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccg 211 ||||||||||| | | ||||||||| |||| |||||| ||||||| |||||||||| | Sbjct: 125 acccgccggacatgaaggccggcggcggcgaggccggcgtggtcgtccacgacctggcgg 184 Query: 212 gcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccg 271 ||| | |||||||||||||||||| |||| | ||| | ||||| ||||||||||||||| Sbjct: 185 gctacgaggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccg 244 Query: 272 atttctacggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctg 331 | ||||||| ||||||||||| || ||||| |||| || || ||||| ||||| || | Sbjct: 245 acgtctacggtttccaagcgccgttactgaggcaaatagctgataaagttggtgatgccg 304 Query: 332 gatactacgttgtggt 347 |||| ||||| ||||| Sbjct: 305 gatattacgtcgtggt 320
>dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071C10, full insert sequence Length = 954 Score = 119 bits (60), Expect = 9e-24 Identities = 162/196 (82%) Strand = Plus / Plus Query: 152 acccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccg 211 ||||||||||| | | ||||||||| |||| |||||| ||||||| |||||||||| | Sbjct: 114 acccgccggacatgaaggccggcggcggcgaggccggcgtggtcgtccacgacctggcgg 173 Query: 212 gcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccg 271 ||| | |||||||||||||||||| |||| | ||| | ||||| ||||||||||||||| Sbjct: 174 gctacgaggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccg 233 Query: 272 atttctacggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctg 331 | ||||||| ||||||||||| || ||||| |||| || || ||||| ||||| || | Sbjct: 234 acgtctacggtttccaagcgccgttactgaggcaaatagctgataaagttggtgatgccg 293 Query: 332 gatactacgttgtggt 347 |||| ||||| ||||| Sbjct: 294 gatattacgtcgtggt 309
>ref|XM_480882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 264 Score = 117 bits (59), Expect = 4e-23 Identities = 110/127 (86%) Strand = Plus / Plus Query: 167 ccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacg 226 ||||||||||| |||| |||||| ||| ||| |||||||||| |||| | ||||||||| Sbjct: 125 ccgccggcggcggcgaggccggcgtggtagtccacgacctggcgggctacgaggcctacg 184 Query: 227 tcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttctacggattcc 286 ||||||||| |||| | ||| || |||||||||||||||||||||| ||||||| |||| Sbjct: 185 tcaccggcgccgcccactccgaccgggccgtcgtcctcgcctccgacgtctacggtttcc 244 Query: 287 aagcgcc 293 ||||||| Sbjct: 245 aagcgcc 251
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 167 ccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacg 226 ||||||||||| |||| |||||| ||| ||| |||||||||| |||| | ||||||||| Sbjct: 8405850 ccgccggcggcggcgaggccggcgtggtagtccacgacctggcgggctacgaggcctacg 8405909 Query: 227 tcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttctacgg 281 ||||||||| |||| | ||| || |||||||||||||||||||||| ||||||| Sbjct: 8405910 tcaccggcgccgcccactccgaccgggccgtcgtcctcgcctccgacgtctacgg 8405964 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 313 gacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttcaatggacaacct 372 |||||||| ||||||||||| || ||||||||||| || || |||||| ||||||||||| Sbjct: 8401821 gacaaagttggtgaagctgggtattacgttgtggtacctgatttcttccatggacaacct 8401880 Query: 373 ta 374 || Sbjct: 8401881 ta 8401882 Score = 58.0 bits (29), Expect = 3e-05 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacg---agaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| ||| || |||||| |||| |||| || Sbjct: 8399756 cgacaacccgccggagctgacggccgacggcgacggtgaggccggcgtggtcatcgatga 8399815 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacg 238 |||||| |||||| |||||| ||||||||||||| Sbjct: 8399816 cctggcaggcttcccggcctatgtcaccggcgacg 8399850 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 181 gagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacgtcaccggcg 235 ||||||| || ||||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 11131777 gagaccgtcgtggtcgtcctcgacctggctggcttctcggcctacgtcaccggcg 11131723 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccga 272 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| Sbjct: 8388157 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccga 8388210 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||||||||||| Sbjct: 8437648 ggtaaaagcagctgaagatgctaaaccaatctt 8437680 Score = 48.1 bits (24), Expect = 0.029 Identities = 69/84 (82%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacct 206 |||||||||||||||| | || |||||||| ||| |||||| |||||| | ||||| Sbjct: 8421540 cgacaacccgccggacttgacagccggcggaggtgaggccggcgtggtcgtacatgacct 8421599 Query: 207 ggccggcttcaaggcctacgtcac 230 ||| |||||| ||||||| ||||| Sbjct: 8421600 ggcaggcttcgaggcctatgtcac 8421623 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 8390330 tgttggagttggaggttattgttggggcgg 8390359 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||| ||||||| Sbjct: 8425263 ggtaaaagcagctgaagatgctaaagcaatctt 8425295 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccga 128 ||||||||||||||||||||| Sbjct: 2995394 cagcggcgccgccgccgccga 2995414 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 180 cgagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacgtcaccggcg 235 |||| |||||| ||||||| |||| || | || ||| |||||||||||||||||| Sbjct: 8431152 cgaggccggcgtggtcgtccacgatcttggaggattcgaggcctacgtcaccggcg 8431207
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 167 ccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacg 226 ||||||||||| |||| |||||| ||| ||| |||||||||| |||| | ||||||||| Sbjct: 21567 ccgccggcggcggcgaggccggcgtggtagtccacgacctggcgggctacgaggcctacg 21626 Query: 227 tcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttctacgg 281 ||||||||| |||| | ||| || |||||||||||||||||||||| ||||||| Sbjct: 21627 tcaccggcgccgcccactccgaccgggccgtcgtcctcgcctccgacgtctacgg 21681 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 313 gacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttcaatggacaacct 372 |||||||| ||||||||||| || ||||||||||| || || |||||| ||||||||||| Sbjct: 17538 gacaaagttggtgaagctgggtattacgttgtggtacctgatttcttccatggacaacct 17597 Query: 373 ta 374 || Sbjct: 17598 ta 17599 Score = 58.0 bits (29), Expect = 3e-05 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacg---agaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| ||| || |||||| |||| |||| || Sbjct: 15473 cgacaacccgccggagctgacggccgacggcgacggtgaggccggcgtggtcatcgatga 15532 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacg 238 |||||| |||||| |||||| ||||||||||||| Sbjct: 15533 cctggcaggcttcccggcctatgtcaccggcgacg 15567 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccga 272 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| Sbjct: 3874 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccga 3927 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||||||||||| Sbjct: 53365 ggtaaaagcagctgaagatgctaaaccaatctt 53397 Score = 48.1 bits (24), Expect = 0.029 Identities = 69/84 (82%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacct 206 |||||||||||||||| | || |||||||| ||| |||||| |||||| | ||||| Sbjct: 37257 cgacaacccgccggacttgacagccggcggaggtgaggccggcgtggtcgtacatgacct 37316 Query: 207 ggccggcttcaaggcctacgtcac 230 ||| |||||| ||||||| ||||| Sbjct: 37317 ggcaggcttcgaggcctatgtcac 37340 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 6047 tgttggagttggaggttattgttggggcgg 6076 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||| ||||||| Sbjct: 40980 ggtaaaagcagctgaagatgctaaagcaatctt 41012 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 180 cgagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacgtcaccggcg 235 |||| |||||| ||||||| |||| || | || ||| |||||||||||||||||| Sbjct: 46869 cgaggccggcgtggtcgtccacgatcttggaggattcgaggcctacgtcaccggcg 46924
>ref|XM_507574.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.39 mRNA Length = 1024 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttcta 278 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| ||| Sbjct: 189 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctt 248 Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||| |||| |||||| |||||||||| || |||||||| |||||||| ||||| || Sbjct: 249 tggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatatta 308 Query: 339 cgttgtggtgcccgacttcttc 360 ||| |||||||| || |||||| Sbjct: 309 cgtcgtggtgccagatttcttc 330 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 459 tgttggagttggaggttattgttggggcgg 488
>ref|XM_480878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1024 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttcta 278 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| ||| Sbjct: 189 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctt 248 Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||| |||| |||||| |||||||||| || |||||||| |||||||| ||||| || Sbjct: 249 tggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatatta 308 Query: 339 cgttgtggtgcccgacttcttc 360 ||| |||||||| || |||||| Sbjct: 309 cgtcgtggtgccagatttcttc 330 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 459 tgttggagttggaggttattgttggggcgg 488
>ref|XM_507174.2| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.39 mRNA Length = 1032 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttcta 278 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| ||| Sbjct: 189 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctt 248 Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||| |||| |||||| |||||||||| || |||||||| |||||||| ||||| || Sbjct: 249 tggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatatta 308 Query: 339 cgttgtggtgcccgacttcttc 360 ||| |||||||| || |||||| Sbjct: 309 cgtcgtggtgccagatttcttc 330 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 459 tgttggagttggaggttattgttggggcgg 488
>ref|XM_507173.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.39 mRNA Length = 1062 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttcta 278 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| ||| Sbjct: 227 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctt 286 Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||| |||| |||||| |||||||||| || |||||||| |||||||| ||||| || Sbjct: 287 tggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatatta 346 Query: 339 cgttgtggtgcccgacttcttc 360 ||| |||||||| || |||||| Sbjct: 347 cgtcgtggtgccagatttcttc 368 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 497 tgttggagttggaggttattgttggggcgg 526
>dbj|AK104922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D02, full insert sequence Length = 1024 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttcta 278 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| ||| Sbjct: 189 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctt 248 Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||| |||| |||||| |||||||||| || |||||||| |||||||| ||||| || Sbjct: 249 tggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatatta 308 Query: 339 cgttgtggtgcccgacttcttc 360 ||| |||||||| || |||||| Sbjct: 309 cgtcgtggtgccagatttcttc 330 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 459 tgttggagttggaggttattgttggggcgg 488
>dbj|AK067264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H10, full insert sequence Length = 1062 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccgatttcta 278 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| ||| Sbjct: 227 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccgacgtctt 286 Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||| |||| |||||| |||||||||| || |||||||| |||||||| ||||| || Sbjct: 287 tggatttgaagcaccattgctgaggaaaatagctgacaaagttggtgaagcgggatatta 346 Query: 339 cgttgtggtgcccgacttcttc 360 ||| |||||||| || |||||| Sbjct: 347 cgtcgtggtgccagatttcttc 368 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 497 tgttggagttggaggttattgttggggcgg 526
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 152 acccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccg 211 ||||||||||| | | ||||||||| |||| |||||| ||||||| |||||||||| | Sbjct: 93356 acccgccggacatgaaggccggcggcggcgaggccggcgtggtcgtccacgacctggcgg 93297 Query: 212 gcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccg 271 ||| | |||||||||||||||||| |||| | ||| | ||||| ||||||||||||||| Sbjct: 93296 gctacgaggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccg 93237 Query: 272 atttctacgg 281 | ||||||| Sbjct: 93236 acgtctacgg 93227 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 309 tgccgacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttcaatggaca 368 |||||||||||| ||||||||||| || ||||||||||| || || |||||| ||||||| Sbjct: 98311 tgccgacaaagttggtgaagctgggtattacgttgtggtacctgatttcttccatggaca 98252 Query: 369 acctta 374 |||||| Sbjct: 98251 acctta 98246 Score = 58.0 bits (29), Expect = 3e-05 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 147 cgacaacccgccggacctcaccgccggcggcaac---gagaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| || ||| |||||| |||| ||||||| Sbjct: 99979 cgacaacccgccggagctgacggccgacggcgacagtgaggccggcgtggtcatcgacga 99920 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacg 238 |||||| |||||| ||| || ||||||||||||| Sbjct: 99919 cctggcaggcttcccggcgtatgtcaccggcgacg 99885 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 72691 tgttggagttggaggttattgttggggcgg 72662 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||| ||||||| Sbjct: 97851 ggtaaaagcagctgaagatgctaaatcaatctt 97819
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 152 acccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccg 211 ||||||||||| | | ||||||||| |||| |||||| ||||||| |||||||||| | Sbjct: 9656321 acccgccggacatgaaggccggcggcggcgaggccggcgtggtcgtccacgacctggcgg 9656380 Query: 212 gcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccg 271 ||| | |||||||||||||||||| |||| | ||| | ||||| ||||||||||||||| Sbjct: 9656381 gctacgaggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccg 9656440 Query: 272 atttctacgg 281 | ||||||| Sbjct: 9656441 acgtctacgg 9656450 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 309 tgccgacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttcaatggaca 368 |||||||||||| ||||||||||| || ||||||||||| || || |||||| ||||||| Sbjct: 9651366 tgccgacaaagttggtgaagctgggtattacgttgtggtacctgatttcttccatggaca 9651425 Query: 369 acctta 374 |||||| Sbjct: 9651426 acctta 9651431 Score = 58.0 bits (29), Expect = 3e-05 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaac---gagaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| || ||| |||||| |||| ||||||| Sbjct: 9649698 cgacaacccgccggagctgacggccgacggcgacagtgaggccggcgtggtcatcgacga 9649757 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacg 238 |||||| |||||| ||| || ||||||||||||| Sbjct: 9649758 cctggcaggcttcccggcgtatgtcaccggcgacg 9649792 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 9676986 tgttggagttggaggttattgttggggcgg 9677015 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||| ||||||| Sbjct: 9651826 ggtaaaagcagctgaagatgctaaatcaatctt 9651858
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 152 acccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacctggccg 211 ||||||||||| | | ||||||||| |||| |||||| ||||||| |||||||||| | Sbjct: 9728018 acccgccggacatgaaggccggcggcggcgaggccggcgtggtcgtccacgacctggcgg 9728077 Query: 212 gcttcaaggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccg 271 ||| | |||||||||||||||||| |||| | ||| | ||||| ||||||||||||||| Sbjct: 9728078 gctacgaggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccg 9728137 Query: 272 atttctacgg 281 | ||||||| Sbjct: 9728138 acgtctacgg 9728147 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 309 tgccgacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttcaatggaca 368 |||||||||||| ||||||||||| || ||||||||||| || || |||||| ||||||| Sbjct: 9723063 tgccgacaaagttggtgaagctgggtattacgttgtggtacctgatttcttccatggaca 9723122 Query: 369 acctta 374 |||||| Sbjct: 9723123 acctta 9723128 Score = 58.0 bits (29), Expect = 3e-05 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaac---gagaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| || ||| |||||| |||| ||||||| Sbjct: 9721395 cgacaacccgccggagctgacggccgacggcgacagtgaggccggcgtggtcatcgacga 9721454 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacg 238 |||||| |||||| ||| || ||||||||||||| Sbjct: 9721455 cctggcaggcttcccggcgtatgtcaccggcgacg 9721489 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 9748683 tgttggagttggaggttattgttggggcgg 9748712 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 420 ggtaaaagccgctcaagatgctaaaccaatctt 452 ||||||||| ||| ||||||||||| ||||||| Sbjct: 9723523 ggtaaaagcagctgaagatgctaaatcaatctt 9723555
>dbj|AK104657.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D03, full insert sequence Length = 1036 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 251 gggccgtcgtcctcgcctccgatttctacggattccaagcgccattgttgaggaaaattg 310 ||||| |||||||||||||||| ||| ||||| |||| |||||| |||||||||| | Sbjct: 233 gggccatcgtcctcgcctccgacgtctttggatttgaagcaccattgctgaggaaaatag 292 Query: 311 ccgacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttc 360 | |||||||| |||||||| ||||| ||||| |||||||| || |||||| Sbjct: 293 ctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttcttc 342 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 471 tgttggagttggaggttattgttggggcgg 500
>dbj|AK059739.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-F02, full insert sequence Length = 1044 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 251 gggccgtcgtcctcgcctccgatttctacggattccaagcgccattgttgaggaaaattg 310 ||||| |||||||||||||||| ||| ||||| |||| |||||| |||||||||| | Sbjct: 233 gggccatcgtcctcgcctccgacgtctttggatttgaagcaccattgctgaggaaaatag 292 Query: 311 ccgacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttc 360 | |||||||| |||||||| ||||| ||||| |||||||| || |||||| Sbjct: 293 ctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttcttc 342 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 471 tgttggagttggaggttattgttggggcgg 500
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 313 gacaaagtcggtgaagctggatactacgttgtggtgcccgacttcttcaatggacaacct 372 |||||||| ||||||||||| || ||||||||||| || || |||||| ||||||||||| Sbjct: 141930 gacaaagttggtgaagctgggtattacgttgtggtacctgatttcttccatggacaacct 141989 Query: 373 ta 374 || Sbjct: 141990 ta 141991 Score = 58.0 bits (29), Expect = 3e-05 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacg---agaccggcgcggtcgtcgacga 203 ||||||||||||||| || || |||| |||| ||| || |||||| |||| |||| || Sbjct: 139865 cgacaacccgccggagctgacggccgacggcgacggtgaggccggcgtggtcatcgatga 139924 Query: 204 cctggccggcttcaaggcctacgtcaccggcgacg 238 |||||| |||||| |||||| ||||||||||||| Sbjct: 139925 cctggcaggcttcccggcctatgtcaccggcgacg 139959 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 219 ggcctacgtcaccggcgacgccaaatcccacagggccgtcgtcctcgcctccga 272 ||||||||||||||||| |||| | ||| | ||||| |||||||||||||||| Sbjct: 128266 ggcctacgtcaccggcgccgcccactccggccgggccatcgtcctcgcctccga 128319 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgg 512 |||||||||||| || |||||||||||||| Sbjct: 130439 tgttggagttggaggttattgttggggcgg 130468
>ref|XM_480883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 982 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 251 gggccgtcgtcctcgcctccgatttctacggattccaagcgccattgttgaggaaaattg 310 |||||||||||||||||||||| ||||||| ||||||||||| || ||||| |||| | Sbjct: 184 gggccgtcgtcctcgcctccgacgtctacggtttccaagcgccgttactgaggcaaatag 243 Query: 311 ccgacaaagtcggtgaagctggata 335 | || ||||| ||||| || ||||| Sbjct: 244 ctgataaagttggtgatgccggata 268
>dbj|AK059758.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E06, full insert sequence Length = 980 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 251 gggccgtcgtcctcgcctccgatttctacggattccaagcgccattgttgaggaaaattg 310 |||||||||||||||||||||| ||||||| ||||||||||| || ||||| |||| | Sbjct: 182 gggccgtcgtcctcgcctccgacgtctacggtttccaagcgccgttactgaggcaaatag 241 Query: 311 ccgacaaagtcggtgaagctggata 335 | || ||||| ||||| || ||||| Sbjct: 242 ctgataaagttggtgatgccggata 266
>dbj|AK059753.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B07, full insert sequence Length = 1135 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 415 tctccggtaaaagccgctcaagatgctaaaccaatctt 452 |||||||||||||| ||| ||||||||||||||||||| Sbjct: 408 tctccggtaaaagcagctgaagatgctaaaccaatctt 445 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 279 cggattccaagcgccattgttgaggaaaattgccgacaaagtcggtgaagctggatacta 338 ||||||| ||||||||||| |||||||||| || || ||||| ||| ||| ||||| || Sbjct: 272 cggattcgaagcgccattgctgaggaaaatagctgataaagttggtctagccggatatta 331 Query: 339 cgttgtggtgcccgacttcttcaatggacaacc 371 ||| || ||||| || || ||| |||||||||| Sbjct: 332 cgtcgttgtgcctgatttgttccatggacaacc 364 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 483 tgttggagttgggggctattgttggggcgggaa 515 |||||||||||| || || |||||||||||||| Sbjct: 476 tgttggagttggaggttactgttggggcgggaa 508
>ref|XM_481271.1| Oryza sativa (japonica cultivar-group), mRNA Length = 387 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 181 gagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacgtcaccggcg 235 ||||||| || ||||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 268 gagaccgtcgtggtcgtcctcgacctggctggcttctcggcctacgtcaccggcg 322
>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1446H11 Length = 135488 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 181 gagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacgtcaccggcg 235 ||||||| || ||||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 102383 gagaccgtcgtggtcgtcctcgacctggctggcttctcggcctacgtcaccggcg 102329
>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0560B10, complete sequence Length = 108295 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 181 gagaccggcgcggtcgtcgacgacctggccggcttcaaggcctacgtcaccggcg 235 ||||||| || ||||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 90293 gagaccgtcgtggtcgtcctcgacctggctggcttctcggcctacgtcaccggcg 90239
>ref|XM_480885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 531 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 415 tctccggtaaaagccgctcaagatgctaaaccaatctt 452 |||||||||||||| ||| ||||||||||| ||||||| Sbjct: 145 tctccggtaaaagcagctgaagatgctaaagcaatctt 182
>ref|XM_480884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 216 Score = 48.1 bits (24), Expect = 0.029 Identities = 69/84 (82%) Strand = Plus / Plus Query: 147 cgacaacccgccggacctcaccgccggcggcaacgagaccggcgcggtcgtcgacgacct 206 |||||||||||||||| | || |||||||| ||| |||||| |||||| | ||||| Sbjct: 78 cgacaacccgccggacttgacagccggcggaggtgaggccggcgtggtcgtacatgacct 137 Query: 207 ggccggcttcaaggcctacgtcac 230 ||| |||||| ||||||| ||||| Sbjct: 138 ggcaggcttcgaggcctatgtcac 161
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 93 cctcgccgtgctggccagcggcgccgccgccgccg 127 ||||| |||||||||||||| | |||||||||||| Sbjct: 3809958 cctcggcgtgctggccagcgcccccgccgccgccg 3809992
>emb|BX069370.1|CNS09POU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6AA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 gacgccaaatcccacagggccg 256 |||||||||||||||||||||| Sbjct: 418 gacgccaaatcccacagggccg 397
>emb|BX060320.1|CNS09IPG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC40CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1016 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 gacgccaaatcccacagggccg 256 |||||||||||||||||||||| Sbjct: 441 gacgccaaatcccacagggccg 420
>emb|BX048308.1|CNS099FS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23BF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 929 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 gacgccaaatcccacagggccg 256 |||||||||||||||||||||| Sbjct: 393 gacgccaaatcccacagggccg 372
>emb|BX041701.1|CNS094C9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 957 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 gacgccaaatcccacagggccg 256 |||||||||||||||||||||| Sbjct: 336 gacgccaaatcccacagggccg 315
>ref|XM_309476.2| Anopheles gambiae str. PEST ENSANGP00000021987 (ENSANGG00000019498), partial mRNA Length = 1491 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 gacgccaaatcccacagggccg 256 |||||||||||||||||||||| Sbjct: 434 gacgccaaatcccacagggccg 413
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 209 ccggcttcaaggcctacgtcaccggc 234 ||||| |||||||||||||||||||| Sbjct: 2502093 ccggcgtcaaggcctacgtcaccggc 2502118
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 70 ctctacccgggcctcctctgcctcctcgcc 99 ||||||| ||||||||||| |||||||||| Sbjct: 451826 ctctacctgggcctcctcttcctcctcgcc 451797
>ref|NM_188031.1| Oryza sativa (japonica cultivar-group), Ozsa8451 predicted mRNA Length = 3243 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 tcctcgccgtgctggccagcggcgccgccgccg 124 ||||||||||| ||||| |||||| |||||||| Sbjct: 2349 tcctcgccgtgatggcccgcggcggcgccgccg 2381
>ref|XM_480132.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1404 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccga 128 ||||||||||||||||||||| Sbjct: 96 cagcggcgccgccgccgccga 76
>ref|NM_187531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ccagcggcgccgccgccgccg 127 ||||||||||||||||||||| Sbjct: 58 ccagcggcgccgccgccgccg 38
>gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans strain EST4002 plasmid pEST4011, complete sequence Length = 76958 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 97 gccgtgctggccagcggcgccgccgccgccgaa 129 |||||||||||||||| || ||| ||||||||| Sbjct: 7419 gccgtgctggccagcgacggcgctgccgccgaa 7387
>gb|AC124211.2| Mus musculus chromosome X clone CT7-497M13 map qA7.1, complete sequence Length = 114873 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 gcattgaagaaggagaagagg 477 ||||||||||||||||||||| Sbjct: 20658 gcattgaagaaggagaagagg 20638
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ccagcggcgccgccgccgccg 127 ||||||||||||||||||||| Sbjct: 11912362 ccagcggcgccgccgccgccg 11912382
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 gccagcggcgccgccgccgccgaac 130 ||||||||| ||||||||||||||| Sbjct: 1805807 gccagcggcaccgccgccgccgaac 1805831
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 cgcggtcgtcgacgacctggccggc 213 ||||||||||||||||| ||||||| Sbjct: 2079247 cgcggtcgtcgacgaccaggccggc 2079223
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tcaaggcctacgtcaccggcg 235 ||||||||||||||||||||| Sbjct: 132711 tcaaggcctacgtcaccggcg 132731
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 ctggccagcggcgccgccgccgccg 127 |||||||||| |||||||||||||| Sbjct: 1887801 ctggccagcgccgccgccgccgccg 1887825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ggccagcggcgccgccgccgc 125 ||||||||||||||||||||| Sbjct: 209783 ggccagcggcgccgccgccgc 209763
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ccggcgcggtcgtcgacgacctggc 209 ||||| ||||||||||||||||||| Sbjct: 5024927 ccggctcggtcgtcgacgacctggc 5024951
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ccagcggcgccgccgccgccg 127 ||||||||||||||||||||| Sbjct: 11909125 ccagcggcgccgccgccgccg 11909145
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 tcctcgccgtgctggccagcggcgccgccgccg 124 ||||||||||| ||||| |||||| |||||||| Sbjct: 9250465 tcctcgccgtgatggcccgcggcggcgccgccg 9250497
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 cgagaccggcgcggtcgtcgacgac 204 ||||||| ||||||||||||||||| Sbjct: 8210610 cgagacccgcgcggtcgtcgacgac 8210634 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cgccggcggcaacgagaccgg 188 ||||||||||||||||||||| Sbjct: 7116785 cgccggcggcaacgagaccgg 7116765 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gagaccggcgcggtcgtcgacgac 204 |||||||||||| ||||||||||| Sbjct: 3391444 gagaccggcgcgatcgtcgacgac 3391421 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gtgctggccagcggcgccgccgcc 123 |||||||||||| ||||||||||| Sbjct: 285197 gtgctggccagccgcgccgccgcc 285220
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 tcctcgccgtgctggccagcggcgccgccgccg 124 ||||||||||| ||||| |||||| |||||||| Sbjct: 27059 tcctcgccgtgatggcccgcggcggcgccgccg 27091
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 tcctcgccgtgctggccagcggcgccgccgccg 124 ||||||||||| ||||| |||||| |||||||| Sbjct: 150847 tcctcgccgtgatggcccgcggcggcgccgccg 150879
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 tcgccgtgctggccagcggcgccgccgcc 123 ||||| ||||| ||||||||||||||||| Sbjct: 1256193 tcgccatgctgaccagcggcgccgccgcc 1256221
>gb|AF201682.1|AF201682 Mycobacterium marinum phenylalanyl-tRNA synthetase chain B (pheTB) gene, partial cds; and PE-PGRS homolog MAG24-1 (mag24-1), PE-PGRS homolog MAG24-2 (mag24-2), and PE-PGRS homolog MAG24-3 (mag24-3) genes, complete cds Length = 9268 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gctggccagcggcgccgccgc 122 ||||||||||||||||||||| Sbjct: 1340 gctggccagcggcgccgccgc 1360
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 183 gaccggcgcggtcgtcgacgacctggccg 211 ||||||| |||||| |||||||||||||| Sbjct: 5244828 gaccggctcggtcgccgacgacctggccg 5244800
>emb|AJ426486.1|MTU426486 Mycobacterium tuberculosis mmpS6 gene and mmpL6 gene Length = 3953 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tcaaggcctacgtcaccggcg 235 ||||||||||||||||||||| Sbjct: 1240 tcaaggcctacgtcaccggcg 1260
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccga 128 ||||||||||||||||||||| Sbjct: 46117 cagcggcgccgccgccgccga 46137
>dbj|AK065989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046E14, full insert sequence Length = 1796 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ccagcggcgccgccgccgccg 127 ||||||||||||||||||||| Sbjct: 238 ccagcggcgccgccgccgccg 218
>gb|AF072326.1|AF072326 Zea mays endo-1,3-1,4-beta-D-glucanase mRNA, complete cds Length = 1020 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Plus Query: 394 acagaatggttcctggcccactctccggtaaaagccgctcaagatgctaaaccaatcttc 453 ||||||||| || ||| ||||||||||| ||||| || |||| ||||| ||| | ||| Sbjct: 416 acagaatggctcgaggctcactctccggtgaaagctgcggaagacgctaagccactgttc 475 Query: 454 gcagcattgaagaagga 470 || || ||||||||||| Sbjct: 476 gccgctttgaagaagga 492 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gccgtcgtcctcgcctccga 272 |||||||||||||||||||| Sbjct: 275 gccgtcgtcctcgcctccga 294
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 174 cggcaacgagaccggcgcggtcgtcgacg 202 |||| ||||||||||||||| |||||||| Sbjct: 2343618 cggcgacgagaccggcgcggccgtcgacg 2343590
>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence Length = 99448 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 97 gccgtgctggccagcggcgccgccgccgccgaa 129 |||||||||||||||| || ||| ||||||||| Sbjct: 56221 gccgtgctggccagcgacggcgctgccgccgaa 56189
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ccagcggcgccgccgccgccg 127 ||||||||||||||||||||| Sbjct: 13624 ccagcggcgccgccgccgccg 13644
>gb|AY639386.1| Streptomyces nodosus oxidoreductase, regulatory protein, hypothetical protein, methyltransferase, transcriptional regulator, AmphRI, AmphRII, AmphRIII, AmphRIV, LysR-type transcriptional regulator, 3-ketoacyl CoA thiolase, CoA transferase subunit A, and CoA transferase subunit B genes, complete cds Length = 20832 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 cctcaccgccggcggcaacgagac 185 ||||||||||||||||| |||||| Sbjct: 9967 cctcaccgccggcggcagcgagac 9990
>ref|XM_475917.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2613 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 143 cagcggcgccgccgccgccg 162
>ref|XM_473686.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1227 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 183 cagcggcgccgccgccgccg 164
>gb|BT018617.1| Zea mays clone EL01N0501E07.d mRNA sequence Length = 1689 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 ctggccagcggcgccgccgccgcc 126 |||||||||||||||||| ||||| Sbjct: 116 ctggccagcggcgccgccaccgcc 139
>gb|AY023182.1| Oryza sativa microsatellite MRG5507 containing (GCG)X8, closest to marker C1100, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 130 cagcggcgccgccgccgccg 111
>ref|XM_359532.1| Magnaporthe grisea 70-15 predicted protein (MG05245.4) partial mRNA Length = 1275 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 tggccagcggcgccgccgccgccg 127 ||||||||| |||||||||||||| Sbjct: 1237 tggccagcgccgccgccgccgccg 1214
>ref|XM_414830.1| PREDICTED: Gallus gallus similar to voltage-dependent calcium channel alpha 1G subunit isoform 11; calcium channel, voltage-dependent, T type, alpha-1G subunit (LOC416526), mRNA Length = 7884 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ccgggcctcctctgcctcct 95 |||||||||||||||||||| Sbjct: 5133 ccgggcctcctctgcctcct 5114
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 125886 gcggcgccgccgccgccgaa 125905
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 47802 cagcggcgccgccgccgccg 47821
>ref|XM_955557.1| Neurospora crassa OR74A hypothetical protein ( (AL513442) related to nuclear protein SA-1 [Neurospora crassa OR74A] ) (NCU01247.1) partial mRNA Length = 3669 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 cgtcctcgcctccgatttct 277 |||||||||||||||||||| Sbjct: 1567 cgtcctcgcctccgatttct 1548
>ref|XM_326739.1| Neurospora crassa OR74A hypothetical protein ( (AL513442) related to nuclear protein SA-1 [Neurospora crassa OR74A] ) (NCU01247.1) partial mRNA Length = 3669 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 cgtcctcgcctccgatttct 277 |||||||||||||||||||| Sbjct: 1567 cgtcctcgcctccgatttct 1548
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cctcaccgccggcggcaacg 181 |||||||||||||||||||| Sbjct: 4912611 cctcaccgccggcggcaacg 4912592
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gccgccgccgccgaacctca 134 |||||||||||||||||||| Sbjct: 182635 gccgccgccgccgaacctca 182654
>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence Length = 193489 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gcaaacagaacagaatggtt 404 |||||||||||||||||||| Sbjct: 10377 gcaaacagaacagaatggtt 10396
>gb|AY526372.1| Arachis hypogaea clone PM616 microsatellite sequence Length = 376 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgccgccgccgccgaacctc 133 |||||||||||||||||||| Sbjct: 198 cgccgccgccgccgaacctc 179
>gb|AC130531.4| Mus musculus BAC clone RP23-167P1 from chromosome 19, complete sequence Length = 202186 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gcagcattgaagaaggagaa 473 |||||||||||||||||||| Sbjct: 19633 gcagcattgaagaaggagaa 19652
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 42555 cagcggcgccgccgccgccg 42536
>gb|AY054407.1| Oryza sativa glyoxalase II (GLXII) mRNA, complete cds Length = 1623 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gacctcaccgccggcggcaacgag 183 |||||||||||||||||| ||||| Sbjct: 39 gacctcaccgccggcggcgacgag 62
>ref|XM_844422.1| PREDICTED: Canis familiaris similar to Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (QPRTase) (LOC607664), mRNA Length = 1097 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 tggccagcggcgccgccgccgccg 127 ||||||||| |||||||||||||| Sbjct: 341 tggccagcgccgccgccgccgccg 364
>gb|AF203748.1| Taphozous sp. Brca1 (Brca1) gene, partial cds Length = 2794 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 caaacagaacagaatggttc 405 |||||||||||||||||||| Sbjct: 804 caaacagaacagaatggttc 823
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtgctggccagcggcg 115 |||||||||||||||||||| Sbjct: 287511 cgccgtgctggccagcggcg 287530
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ggccagcggcgccgccgccg 124 |||||||||||||||||||| Sbjct: 203908 ggccagcggcgccgccgccg 203889
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccgtgctggccagcggcg 115 |||||||||||||||||||| Sbjct: 303494 cgccgtgctggccagcggcg 303513
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ggccagcggcgccgccgccg 124 |||||||||||||||||||| Sbjct: 275947 ggccagcggcgccgccgccg 275966
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccgtgctggccagcggcg 115 |||||||||||||||||||| Sbjct: 180026 cgccgtgctggccagcggcg 180007
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctcaccgccggcggcaacga 182 |||||||||||||||||||| Sbjct: 3296613 ctcaccgccggcggcaacga 3296632
>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16, complete sequence Length = 133113 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 21723 cagcggcgccgccgccgccg 21704
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 137192 cagcggcgccgccgccgccg 137173
>emb|AL513442.1|NC3H10 Neurospora crassa DNA linkage group V Cosmid contig 3H10 Length = 89795 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cgtcctcgcctccgatttct 277 |||||||||||||||||||| Sbjct: 16623 cgtcctcgcctccgatttct 16642
>gb|AE005714.1| Caulobacter crescentus CB15 section 40 of 359 of the complete genome Length = 10440 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gccgtgctggccagcggcgc 116 |||||||||||||||||||| Sbjct: 9635 gccgtgctggccagcggcgc 9654
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cgacaaagtcggtgaagctg 331 |||||||||||||||||||| Sbjct: 1552425 cgacaaagtcggtgaagctg 1552406
>gb|DQ398933.1| Petromyzon marinus neurofilament subunit NF-132 mRNA, complete cds Length = 2518 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gcctcctctgcctcctcgcc 99 |||||||||||||||||||| Sbjct: 1813 gcctcctctgcctcctcgcc 1794
>gb|AC136735.7| Mus musculus chromosome 3, clone RP23-175G2, complete sequence Length = 182455 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gcaaacagaacagaatggtt 404 |||||||||||||||||||| Sbjct: 86515 gcaaacagaacagaatggtt 86496
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 29634503 cagcggcgccgccgccgccg 29634484
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gacctcaccgccggcggcaacgag 183 |||||||||||||||||| ||||| Sbjct: 19832242 gacctcaccgccggcggcgacgag 19832219
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 25691923 cagcggcgccgccgccgccg 25691942 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cctcctctgcctcctcgccgtgct 104 |||||||| ||||||||||||||| Sbjct: 21091084 cctcctctccctcctcgccgtgct 21091107
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 23490901 gcggcgccgccgccgccgaa 23490882
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 28412878 cagcggcgccgccgccgccg 28412897 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 24057397 gcggcgccgccgccgccgaa 24057416
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 162 cctcaccgccggcggcaacgagaccggcgcgg 193 |||||||| ||||||||||| | ||||||||| Sbjct: 1566546 cctcaccgacggcggcaacggggccggcgcgg 1566515
>gb|AC135012.2| Homo sapiens chromosome 16 clone RP11-805I24, complete sequence Length = 157630 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ccgggcctcctctgcctcct 95 |||||||||||||||||||| Sbjct: 129262 ccgggcctcctctgcctcct 129281
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cctcctctgcctcctcgccgtgct 104 |||||||| ||||||||||||||| Sbjct: 12445 cctcctctccctcctcgccgtgct 12468
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cctcctctgcctcctcgccgtgct 104 |||||||| ||||||||||||||| Sbjct: 134383 cctcctctccctcctcgccgtgct 134406
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cgagaccggcgcggtcgtcg 199 |||||||||||||||||||| Sbjct: 4626978 cgagaccggcgcggtcgtcg 4626959
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 150456 gcggcgccgccgccgccgaa 150437
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gacctcaccgccggcggcaacgag 183 |||||||||||||||||| ||||| Sbjct: 56682 gacctcaccgccggcggcgacgag 56659
>gb|AC154005.4| Mus musculus 6 BAC RP24-82B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 181556 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agcattgaagaaggagaaga 475 |||||||||||||||||||| Sbjct: 165660 agcattgaagaaggagaaga 165679
>gb|AC155913.5| Mus musculus 6 BAC RP24-402E22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162332 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 agcattgaagaaggagaaga 475 |||||||||||||||||||| Sbjct: 146400 agcattgaagaaggagaaga 146381
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 9085 cagcggcgccgccgccgccg 9104
>dbj|AK106905.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-H12, full insert sequence Length = 1635 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 173 gcggcgccgccgccgccgaa 192
>dbj|AK103563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132K06, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gacctcaccgccggcggcaacgag 183 |||||||||||||||||| ||||| Sbjct: 30 gacctcaccgccggcggcgacgag 53
>dbj|AK102325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090K06, full insert sequence Length = 1098 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 173 gcggcgccgccgccgccgaa 192
>dbj|AK071680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B05, full insert sequence Length = 1361 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cagcggcgccgccgccgccg 127 |||||||||||||||||||| Sbjct: 211 cagcggcgccgccgccgccg 192
>dbj|AK070780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063J20, full insert sequence Length = 1563 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gacctcaccgccggcggcaacgag 183 |||||||||||||||||| ||||| Sbjct: 109 gacctcaccgccggcggcgacgag 132
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ggccagcggcgccgccgccg 124 |||||||||||||||||||| Sbjct: 561589 ggccagcggcgccgccgccg 561608
>dbj|AK065279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L17, full insert sequence Length = 3394 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 47 gcggcgccgccgccgccgaa 28
>dbj|AK060002.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H10, full insert sequence Length = 1237 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcggcgccgccgccgccgaa 129 |||||||||||||||||||| Sbjct: 166 gcggcgccgccgccgccgaa 185
>gb|AY106736.1| Zea mays PCO074335 mRNA sequence Length = 505 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggacctcaccgccggcggcaacga 182 ||||||||||| |||||||||||| Sbjct: 173 ggacctcaccggcggcggcaacga 196
>gb|AY104719.1| Zea mays PCO136367 mRNA sequence Length = 1169 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gccgtcgtcctcgcctccga 272 |||||||||||||||||||| Sbjct: 285 gccgtcgtcctcgcctccga 304
>gb|AY104594.1| Zea mays PCO132268 mRNA sequence Length = 750 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgccgccgccgccgaacctc 133 |||||||||||||||||||| Sbjct: 201 cgccgccgccgccgaacctc 182
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gccgtcgtcctcgcctccga 272 |||||||||||||||||||| Sbjct: 1993562 gccgtcgtcctcgcctccga 1993581
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cggcgccgccgccgccgaac 130 |||||||||||||||||||| Sbjct: 1723349 cggcgccgccgccgccgaac 1723368
>gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, complete sequence Length = 188944 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gcagcattgaagaaggagaa 473 |||||||||||||||||||| Sbjct: 34104 gcagcattgaagaaggagaa 34085 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,765,715 Number of Sequences: 3902068 Number of extensions: 4765715 Number of successful extensions: 253862 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 242929 Number of HSP's gapped (non-prelim): 10830 length of query: 518 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 495 effective length of database: 17,143,297,704 effective search space: 8485932363480 effective search space used: 8485932363480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
