Clone Name | bart27c04 |
---|---|
Clone Library Name | barley_pub |
>MRL1_ASHGO (Q75BD5) Mannose 6-phosphate receptor-like protein 1 precursor| Length = 273 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -2 Query: 319 RPRWCGEHRGWAQRLQDFLSSRRPAAPRHKPDLAIARCGTPNS 191 RPRW GWA R + F + R A PR LA + G P S Sbjct: 214 RPRWAPAPTGWAARTRAFFA--RAAEPRQAIKLASSPPGHPAS 254
>Y229_BARHE (Q6G4V3) Hypothetical UPF0324 membrane protein BH02290| Length = 348 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -3 Query: 594 MFLAFDLEFLT-AFPETGVSSGLPVTPVVTIIQSLDSVTLFSSRVAFLXSCVRITSLSSI 418 +FL F FL +F + GV SG+ V V ++ + SV+ S ++A + VR+ L + Sbjct: 180 LFLPFLHPFLNLSFSQYGVLSGMVVYAVPQVLAATASVSFVSVQIATVVKLVRVLMLGPL 239
>NFAC1_MOUSE (O88942) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 717 Score = 29.6 bits (65), Expect = 7.2 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +3 Query: 291 PRCSPHHRGLPSPHPTTTIA 350 P CSPHH PSPH + ++ Sbjct: 277 PSCSPHHSPTPSPHGSPRVS 296
>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear| morphology 1) Length = 926 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 570 FLTAFPETGVSSGLPVTPVVTIIQSLDSVTLFSSRVAFLXSCV 442 FL ++ + SGL T + T++Q+LDS+ R CV Sbjct: 308 FLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCV 350
>GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate| cyclase 2E) Length = 1108 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 160 SLKPKPPITPGSWGS-RSARSRDRAYVGGRQAAGC 261 +L P+P +TPGS G+ SA SR VG AGC Sbjct: 102 ALLPEPCLTPGSLGAVSSALSRVSGLVGPVNPAGC 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,429,618 Number of Sequences: 219361 Number of extensions: 994802 Number of successful extensions: 3446 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3443 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)