ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27b10 |
|---|---|
| Clone Library Name | barley_pub |
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 245 bits (625), Expect = 6e-65 Identities = 119/154 (77%), Positives = 136/154 (88%), Gaps = 4/154 (2%) Frame = +1 Query: 67 PNSSGSSDSA----EPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRI 234 P +SG + +A + KLSPSGL +RE+PGGYGVPFFSPLRDRLDY+YFQGAEEYFRSR+ Sbjct: 5 PVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRV 64 Query: 235 ARNGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLF 414 AR+GGATVLRVNMPPGPFI+ N RVVA LDARSF VLLDD+ VDK DTLDGT+MPS LF Sbjct: 65 ARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALF 124 Query: 415 GGYRPLAFMDAADPRHAALKRVMISLAAARMHHV 516 GG+RPLAF+DAADPRHA +KRV++SLAAARMHHV Sbjct: 125 GGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHV 158
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 243 bits (619), Expect = 3e-64 Identities = 117/152 (76%), Positives = 133/152 (87%), Gaps = 3/152 (1%) Frame = +1 Query: 70 NSSGSSDSA---EPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIAR 240 NS +D A + KLSPSGL +RE+PGGYGVPF SPLRDRLDYYYFQGA+E+FRSR+AR Sbjct: 7 NSGDGNDGAVGGQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVAR 66 Query: 241 NGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGG 420 +GGATVLRVNMPPGPF+ + RVVA LDARSF VLLDD+ VDK DTLDGTFMPSL LFGG Sbjct: 67 HGGATVLRVNMPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGG 126 Query: 421 YRPLAFMDAADPRHAALKRVMISLAAARMHHV 516 +RPLAF+DAADPRHA +KRV++SLAAARMHHV Sbjct: 127 HRPLAFLDAADPRHAKIKRVVMSLAAARMHHV 158
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 147 bits (371), Expect = 2e-35 Identities = 70/125 (56%), Positives = 92/125 (73%) Frame = +1 Query: 130 REVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATVLRVNMPPGPFITANSRV 309 R VPG YGVPF S +RDRLD+YY QG ++YF SR R G +TV+R+N+PPGPF+ + RV Sbjct: 10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYG-STVVRINVPPGPFMARDPRV 68 Query: 310 VAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMIS 489 VA LDA+SF VL D A V+K D GTFMPS L GGYR A++D ++P HA +K++++S Sbjct: 69 VALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLS 128 Query: 490 LAAAR 504 L +R Sbjct: 129 LLVSR 133
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 143 bits (360), Expect = 3e-34 Identities = 69/152 (45%), Positives = 100/152 (65%) Frame = +1 Query: 61 KVPNSSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIAR 240 K+P G + P + L +R++PG YG+P P++DRLDY+Y QG EE+F+SR+ + Sbjct: 53 KIP---GITSQPPPSSDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQK 109 Query: 241 NGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGG 420 +TV R NMPPGPFI +N RV+ LDA+SF VL D + V+K D GT+MPS L GG Sbjct: 110 YK-STVYRANMPPGPFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGG 168 Query: 421 YRPLAFMDAADPRHAALKRVMISLAAARMHHV 516 YR L+++D ++P H LK+++ +L R +V Sbjct: 169 YRILSYLDPSEPNHTKLKQLLFNLIKNRRDYV 200
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 140 bits (352), Expect = 3e-33 Identities = 63/127 (49%), Positives = 92/127 (72%), Gaps = 1/127 (0%) Frame = +1 Query: 106 LSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGA-EEYFRSRIARNGGATVLRVNMPPG 282 + PS +RE+PG YG+PFF P++DRL+Y+Y G +EYFRSR+ + +TV R NMPPG Sbjct: 1 MDPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKY-QSTVFRANMPPG 59 Query: 283 PFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRH 462 PF+++N +V+ LDA+SF +L D + V+K D GT+MPS L G YR L+++D ++PRH Sbjct: 60 PFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYLDPSEPRH 119 Query: 463 AALKRVM 483 A LK ++ Sbjct: 120 AQLKNLL 126
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 136 bits (342), Expect = 4e-32 Identities = 65/132 (49%), Positives = 89/132 (67%) Frame = +1 Query: 121 LSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATVLRVNMPPGPFITAN 300 L +R +PG YG+P P++DR DY+Y QGAEE+F+SRI R +TV RVNMPPG FI N Sbjct: 52 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRI-RKYNSTVYRVNMPPGAFIAEN 110 Query: 301 SRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRV 480 +VVA LD +SF VL D V+K D GT+MPS L GGYR L+++D ++P+H LK + Sbjct: 111 PQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNL 170 Query: 481 MISLAAARMHHV 516 + L + + + Sbjct: 171 LFFLLKSSRNRI 182
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 131 bits (330), Expect = 1e-30 Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Frame = +1 Query: 70 NSSGSSDSAEPKLSPSG-LSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNG 246 ++S S+ + +SP L +R+VPG YG P +RDR +Y+Y G + F + R Sbjct: 27 SASASATDRQEVVSPKRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAH 86 Query: 247 GATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTFMPSLVLFGGYR 426 +TV+R+NMPPGPF+ + RVVA LDA SF VL D + VDKTD GTFMPS L GGYR Sbjct: 87 RSTVVRLNMPPGPFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYR 146 Query: 427 PLAFMDAADPRHAALKRVMISLAAARMHHV 516 L+++D ++P HA LK ++ L + R V Sbjct: 147 VLSYLDPSEPNHAPLKTLLFYLLSHRRQQV 176
>YL18_CAEEL (Q11103) Hypothetical protein C02F12.8| Length = 687 Score = 33.9 bits (76), Expect = 0.27 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 2/117 (1%) Frame = +1 Query: 46 PAMTSKVPNSSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQG--AEEY 219 PA + +P + +SP + + P GYG F SP+ Y + G A E Sbjct: 188 PAPPTMMPVGAVMVSQGSYSMSPPQIDTSKPPSGYG--FSSPIFPSPSYSQYSGPPANEG 245 Query: 220 FRSRIARNGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGT 390 F I N G RV P ++ + + ++SFS D + ++G+ Sbjct: 246 FPDIIYDNNGVAYCRVVSAPVCVVSMSQSGSSVCSSQSFSSGQSDISMSSRPPINGS 302
>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 265 Score = 32.7 bits (73), Expect = 0.60 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Frame = +1 Query: 16 AFGVRLALAHPAMTSKVPNSSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYY 195 A +A PA+ ++V +S S P P+ ++V GG S L D Y Sbjct: 44 AMKASIAAGEPAVIAEVKKASPSKGVIRPDFHPADIAVSYEFGGA-----SCLSVLTDMY 98 Query: 196 YFQGAEEYFRSRIARNG-GATVLRVNMPPGPFITANSRVV 312 +FQG++ Y + AR VLR + P+ +RV+ Sbjct: 99 FFQGSDAYLQQ--AREACTLPVLRKDFTVDPYQVYEARVL 136
>BBP1_YEAST (Q12365) Protein BBP1| Length = 385 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = +1 Query: 52 MTSKVPNSSGSSDSAEPKLSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSR 231 + SK+ N G + E + SP LSV+++PG + P RD +D YY + + ++R Sbjct: 163 LLSKLFNKDGVN---EVRRSPYKLSVKDIPGKFPSPLTK--RDEIDNYYVRDEDACHKNR 217
>DLGP4_HUMAN (Q9Y2H0) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 989 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 364 DKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMISLAAARMH 510 + +D+LD + P V GG P P+HAALK +L ++ H Sbjct: 607 NSSDSLDSSTRPPSVTRGGVAPAPEAPEPPPKHAALKSEQGTLTSSESH 655
>RRMJ_ARCFU (O28228) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 191 Score = 31.2 bits (69), Expect = 1.8 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 12/69 (17%) Frame = +1 Query: 172 LRDRLDYYYFQGAEEYFRSRIAR------------NGGATVLRVNMPPGPFITANSRVVA 315 ++DR DYYY++ +E +RSR A G VL + PG + S+V A Sbjct: 1 MKDRQDYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGW----SQVAA 56 Query: 316 FLDARSFSV 342 L AR +V Sbjct: 57 LLGARVVAV 65
>MTA2_MOUSE (Q9R190) Metastasis-associated protein MTA2 (Metastasis-associated| 1-like 1) Length = 668 Score = 31.2 bits (69), Expect = 1.8 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -3 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 AW P CR C SCW+ W + G Sbjct: 380 AWGPPNMQCRLCASCWIYWKKYGG 403
>MTA2_HUMAN (O94776) Metastasis-associated protein MTA2 (Metastasis-associated| 1-like 1) (MTA1-L1 protein) (p53 target protein in deacetylase complex) Length = 668 Score = 31.2 bits (69), Expect = 1.8 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -3 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 AW P CR C SCW+ W + G Sbjct: 380 AWGPPNMQCRLCASCWIYWKKYGG 403
>S29A2_HUMAN (Q14542) Equilibrative nucleoside transporter 2 (Equilibrative| nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter) (Equilibrative NBMPR-insensitive nucleoside transporter) (Nucleoside transporter, ei-type) (Solute carrier f Length = 456 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 250 ATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAXVDKTDTLDGTF 393 A +++V+M PGPF + V F++ SFS +L + + T+ T+ Sbjct: 114 AALVKVDMSPGPFFSITMASVCFIN--SFSAVLQGSLFGQLGTMPSTY 159
>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 268 Score = 30.8 bits (68), Expect = 2.3 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +1 Query: 175 RDRLDYYYFQGAEEYFRSR 231 RDR DYYY Q EE +RSR Sbjct: 3 RDRRDYYYHQAKEEGYRSR 21
>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 272 Score = 30.8 bits (68), Expect = 2.3 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +1 Query: 175 RDRLDYYYFQGAEEYFRSR 231 RDR DYYY Q EE +RSR Sbjct: 3 RDRRDYYYHQAKEEGYRSR 21
>OXAA_NITEU (P59810) Inner membrane protein oxaA| Length = 614 Score = 30.4 bits (67), Expect = 3.0 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 55 TSKVPNSSGSSDSAEPKLSPSGLSVREV 138 T+ +P S G+ DS P+L PSG +R V Sbjct: 70 TNGIPASGGNGDSVTPRLLPSGEQIRVV 97
>PFA4_CRYNE (Q5KLN1) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 456 Score = 29.6 bits (65), Expect = 5.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -3 Query: 100 APHCRCCRSCWVPWTSWQG 44 A HCR C++CWV W G Sbjct: 108 AHHCRQCKTCWVNHCPWIG 126
>PROP_CAVPO (Q64181) Properdin precursor (Factor P)| Length = 470 Score = 29.3 bits (64), Expect = 6.7 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%) Frame = -3 Query: 94 HCRCCRSC-WVPWTSW 50 HC+ CRS W PW+SW Sbjct: 70 HCQACRSPRWSPWSSW 85
>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 992 Score = 29.3 bits (64), Expect = 6.7 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 364 DKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMISLAAARMH 510 + +D+LD + P V GG P P+HAALK +L ++ H Sbjct: 607 NSSDSLDSSTRPPSVTRGGITPGPEAPEPPPKHAALKSEHGTLTSSESH 655
>TRUB_PYRFU (Q7LWY0) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 340 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = +1 Query: 172 LRDRLDYYYF---QGAEEYFRSRI 234 L D +DYYYF G EEYFR I Sbjct: 217 LHDLVDYYYFWKEDGIEEYFRKAI 240
>PPARA_CAVPO (O35507) Peroxisome proliferator-activated receptor alpha| (PPAR-alpha) Length = 467 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 14/70 (20%) Frame = +1 Query: 67 PNSSGS--SDSAEPKLSPSGLSVREVPGGYGVPFFSPLR-------DRLDYYYF-----Q 204 P S GS +D+ P SPS +S EVP G P S L D+ Y++ + Sbjct: 61 PGSDGSVITDTLSPASSPSSVSYPEVPCGVDEPPSSALNIECRICGDKASGYHYGVHACE 120 Query: 205 GAEEYFRSRI 234 G + +FR I Sbjct: 121 GCKGFFRRTI 130
>MTA1_RAT (Q62599) Metastasis-associated protein MTA1| Length = 703 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -3 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>Y1016_HAEIN (P44095) Hypothetical protein HI1016| Length = 142 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 58 SKVPNSSGSSDSAEPKLSPSGLSVREVPGGY 150 SK+PN G+ A GLS+ E+P GY Sbjct: 18 SKIPNHCGTHMDASRHFVKDGLSINELPIGY 48
>MTA1_MOUSE (Q8K4B0) Metastasis-associated protein MTA1| Length = 715 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -3 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1| Length = 715 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -3 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,635,743 Number of Sequences: 219361 Number of extensions: 579771 Number of successful extensions: 2249 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2238 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
