ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27b10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464670.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1721 Score = 396 bits (200), Expect = e-107 Identities = 331/375 (88%) Strand = Plus / Plus Query: 142 ggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttc 201 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 172 ggcggctacggcgtgcccttcttctcgccgctgcgcgaccgcctcgactacttctacttc 231 Query: 202 cagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtgctg 261 |||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||| Sbjct: 232 cagggcgccgaggagtacttccgatcacgcgtcgcccgccacggcggcgccaccgtgctc 291 Query: 262 cgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttcctc 321 |||||||||||||| ||||| || |||||| ||| |||| |||||||||||||| ||||| Sbjct: 292 cgcgtcaacatgccgcccggccccttcatctccggcaacccccgcgtcgtcgccctcctc 351 Query: 322 gacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacgctc 381 ||||||||||||||| |||| |||||||||||| || ||| |||||| ||||||||||| Sbjct: 352 gacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacgctc 411 Query: 382 gacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttcatg 441 ||||| |||| |||||| || | || ||||||||||||| ||||||| ||||||||| | Sbjct: 412 gacggcacctacatgccgtcgcgcgcgctcttcggcggccaccgcccgctcgccttcctc 471 Query: 442 gacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgccgcg 501 |||||||||||||| ||||||||| ||||||||||| |||| |||||||||||| Sbjct: 472 gacgccgccgacccgcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgccgcg 531 Query: 502 cggatgcaccacgtc 516 ||||||||||||||| Sbjct: 532 cggatgcaccacgtc 546
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 396 bits (200), Expect = e-107 Identities = 331/375 (88%) Strand = Plus / Plus Query: 142 ggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttc 201 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 6627654 ggcggctacggcgtgcccttcttctcgccgctgcgcgaccgcctcgactacttctacttc 6627713 Query: 202 cagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtgctg 261 |||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||| Sbjct: 6627714 cagggcgccgaggagtacttccgatcacgcgtcgcccgccacggcggcgccaccgtgctc 6627773 Query: 262 cgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttcctc 321 |||||||||||||| ||||| || |||||| ||| |||| |||||||||||||| ||||| Sbjct: 6627774 cgcgtcaacatgccgcccggccccttcatctccggcaacccccgcgtcgtcgccctcctc 6627833 Query: 322 gacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacgctc 381 ||||||||||||||| |||| |||||||||||| || ||| |||||| ||||||||||| Sbjct: 6627834 gacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacgctc 6627893 Query: 382 gacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttcatg 441 ||||| |||| |||||| || | || ||||||||||||| ||||||| ||||||||| | Sbjct: 6627894 gacggcacctacatgccgtcgcgcgcgctcttcggcggccaccgcccgctcgccttcctc 6627953 Query: 442 gacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgccgcg 501 |||||||||||||| ||||||||| ||||||||||| |||| |||||||||||| Sbjct: 6627954 gacgccgccgacccgcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgccgcg 6628013 Query: 502 cggatgcaccacgtc 516 ||||||||||||||| Sbjct: 6628014 cggatgcaccacgtc 6628028 Score = 371 bits (187), Expect = 2e-99 Identities = 330/378 (87%) Strand = Plus / Plus Query: 139 ccgggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactac 198 ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 6637241 ccgggcggctacggcgtgcccttcctctcgccgctgcgcgaccgcctcgactactattac 6637300 Query: 199 ttccagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtg 258 ||||||||||| || |||| ||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 6637301 ttccagggcgccgacgagttcttccgctcacgcgtcgcccgccacggcggcgccaccgtg 6637360 Query: 259 ctgcgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttc 318 || |||||||||||||| ||||| || ||| || ||| | || |||||||||||||| || Sbjct: 6637361 ctccgcgtcaacatgccgcccggccccttcctcgccggcgacccccgcgtcgtcgccctc 6637420 Query: 319 ctcgacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacg 378 |||||||||||||||||| |||| |||||||||||| || ||| |||||| |||||||| Sbjct: 6637421 ctcgacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacg 6637480 Query: 379 ctcgacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttc 438 |||||||| ||||||||||| || |||| ||||||||||||| ||||||| ||||||||| Sbjct: 6637481 ctcgacggcaccttcatgccgtcgctcgcgctcttcggcggccaccgcccgctcgccttc 6637540 Query: 439 atggacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgcc 498 | |||||||||||||| ||||||||| ||||||||||| |||| |||||||| Sbjct: 6637541 ctcgacgccgccgaccctcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgcg 6637600 Query: 499 gcgcggatgcaccacgtc 516 ||| |||||||||||||| Sbjct: 6637601 gcgaggatgcaccacgtc 6637618
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 396 bits (200), Expect = e-107 Identities = 331/375 (88%) Strand = Plus / Plus Query: 142 ggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttc 201 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 62029 ggcggctacggcgtgcccttcttctcgccgctgcgcgaccgcctcgactacttctacttc 62088 Query: 202 cagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtgctg 261 |||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||| Sbjct: 62089 cagggcgccgaggagtacttccgatcacgcgtcgcccgccacggcggcgccaccgtgctc 62148 Query: 262 cgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttcctc 321 |||||||||||||| ||||| || |||||| ||| |||| |||||||||||||| ||||| Sbjct: 62149 cgcgtcaacatgccgcccggccccttcatctccggcaacccccgcgtcgtcgccctcctc 62208 Query: 322 gacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacgctc 381 ||||||||||||||| |||| |||||||||||| || ||| |||||| ||||||||||| Sbjct: 62209 gacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacgctc 62268 Query: 382 gacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttcatg 441 ||||| |||| |||||| || | || ||||||||||||| ||||||| ||||||||| | Sbjct: 62269 gacggcacctacatgccgtcgcgcgcgctcttcggcggccaccgcccgctcgccttcctc 62328 Query: 442 gacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgccgcg 501 |||||||||||||| ||||||||| ||||||||||| |||| |||||||||||| Sbjct: 62329 gacgccgccgacccgcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgccgcg 62388 Query: 502 cggatgcaccacgtc 516 ||||||||||||||| Sbjct: 62389 cggatgcaccacgtc 62403 Score = 371 bits (187), Expect = 2e-99 Identities = 330/378 (87%) Strand = Plus / Plus Query: 139 ccgggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactac 198 ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 71616 ccgggcggctacggcgtgcccttcctctcgccgctgcgcgaccgcctcgactactattac 71675 Query: 199 ttccagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtg 258 ||||||||||| || |||| ||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 71676 ttccagggcgccgacgagttcttccgctcacgcgtcgcccgccacggcggcgccaccgtg 71735 Query: 259 ctgcgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttc 318 || |||||||||||||| ||||| || ||| || ||| | || |||||||||||||| || Sbjct: 71736 ctccgcgtcaacatgccgcccggccccttcctcgccggcgacccccgcgtcgtcgccctc 71795 Query: 319 ctcgacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacg 378 |||||||||||||||||| |||| |||||||||||| || ||| |||||| |||||||| Sbjct: 71796 ctcgacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacg 71855 Query: 379 ctcgacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttc 438 |||||||| ||||||||||| || |||| ||||||||||||| ||||||| ||||||||| Sbjct: 71856 ctcgacggcaccttcatgccgtcgctcgcgctcttcggcggccaccgcccgctcgccttc 71915 Query: 439 atggacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgcc 498 | |||||||||||||| ||||||||| ||||||||||| |||| |||||||| Sbjct: 71916 ctcgacgccgccgaccctcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgcg 71975 Query: 499 gcgcggatgcaccacgtc 516 ||| |||||||||||||| Sbjct: 71976 gcgaggatgcaccacgtc 71993
>dbj|AK107161.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F02, full insert sequence Length = 1721 Score = 396 bits (200), Expect = e-107 Identities = 331/375 (88%) Strand = Plus / Plus Query: 142 ggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttc 201 |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 172 ggcggctacggcgtgcccttcttctcgccgctgcgcgaccgcctcgactacttctacttc 231 Query: 202 cagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtgctg 261 |||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||| Sbjct: 232 cagggcgccgaggagtacttccgatcacgcgtcgcccgccacggcggcgccaccgtgctc 291 Query: 262 cgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttcctc 321 |||||||||||||| ||||| || |||||| ||| |||| |||||||||||||| ||||| Sbjct: 292 cgcgtcaacatgccgcccggccccttcatctccggcaacccccgcgtcgtcgccctcctc 351 Query: 322 gacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacgctc 381 ||||||||||||||| |||| |||||||||||| || ||| |||||| ||||||||||| Sbjct: 352 gacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacgctc 411 Query: 382 gacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttcatg 441 ||||| |||| |||||| || | || ||||||||||||| ||||||| ||||||||| | Sbjct: 412 gacggcacctacatgccgtcgcgcgcgctcttcggcggccaccgcccgctcgccttcctc 471 Query: 442 gacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgccgcg 501 |||||||||||||| ||||||||| ||||||||||| |||| |||||||||||| Sbjct: 472 gacgccgccgacccgcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgccgcg 531 Query: 502 cggatgcaccacgtc 516 ||||||||||||||| Sbjct: 532 cggatgcaccacgtc 546
>ref|XM_464672.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1856 Score = 371 bits (187), Expect = 2e-99 Identities = 330/378 (87%) Strand = Plus / Plus Query: 139 ccgggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactac 198 ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 169 ccgggcggctacggcgtgcccttcctctcgccgctgcgcgaccgcctcgactactattac 228 Query: 199 ttccagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtg 258 ||||||||||| || |||| ||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 229 ttccagggcgccgacgagttcttccgctcacgcgtcgcccgccacggcggcgccaccgtg 288 Query: 259 ctgcgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttc 318 || |||||||||||||| ||||| || ||| || ||| | || |||||||||||||| || Sbjct: 289 ctccgcgtcaacatgccgcccggccccttcctcgccggcgacccccgcgtcgtcgccctc 348 Query: 319 ctcgacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacg 378 |||||||||||||||||| |||| |||||||||||| || ||| |||||| |||||||| Sbjct: 349 ctcgacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacg 408 Query: 379 ctcgacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttc 438 |||||||| ||||||||||| || |||| ||||||||||||| ||||||| ||||||||| Sbjct: 409 ctcgacggcaccttcatgccgtcgctcgcgctcttcggcggccaccgcccgctcgccttc 468 Query: 439 atggacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgcc 498 | |||||||||||||| ||||||||| ||||||||||| |||| |||||||| Sbjct: 469 ctcgacgccgccgaccctcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgcg 528 Query: 499 gcgcggatgcaccacgtc 516 ||| |||||||||||||| Sbjct: 529 gcgaggatgcaccacgtc 546
>dbj|AK105964.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E05, full insert sequence Length = 1856 Score = 371 bits (187), Expect = 2e-99 Identities = 330/378 (87%) Strand = Plus / Plus Query: 139 ccgggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactac 198 ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 169 ccgggcggctacggcgtgcccttcctctcgccgctgcgcgaccgcctcgactactattac 228 Query: 199 ttccagggcgcggaggagtacttccgctcccgcatcgcccggaacggcggcgccaccgtg 258 ||||||||||| || |||| ||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 229 ttccagggcgccgacgagttcttccgctcacgcgtcgcccgccacggcggcgccaccgtg 288 Query: 259 ctgcgcgtcaacatgccccccgggccgttcatcaccgccaactcccgcgtcgtcgccttc 318 || |||||||||||||| ||||| || ||| || ||| | || |||||||||||||| || Sbjct: 289 ctccgcgtcaacatgccgcccggccccttcctcgccggcgacccccgcgtcgtcgccctc 348 Query: 319 ctcgacgcgcgcagcttcagcgtgctcctcgacgacgccnaggtcgacaagaccgacacg 378 |||||||||||||||||| |||| |||||||||||| || ||| |||||| |||||||| Sbjct: 349 ctcgacgcgcgcagcttccgcgtcctcctcgacgactccatggtggacaaggccgacacg 408 Query: 379 ctcgacgggaccttcatgccctccctcgtgctcttcggcggctaccgcccactcgccttc 438 |||||||| ||||||||||| || |||| ||||||||||||| ||||||| ||||||||| Sbjct: 409 ctcgacggcaccttcatgccgtcgctcgcgctcttcggcggccaccgcccgctcgccttc 468 Query: 439 atggacgccgccgacccccgccacgccgcactcaagcgcgtcatgatcagcctcgccgcc 498 | |||||||||||||| ||||||||| ||||||||||| |||| |||||||| Sbjct: 469 ctcgacgccgccgaccctcgccacgccaagatcaagcgcgtcgtgatgtcgctcgccgcg 528 Query: 499 gcgcggatgcaccacgtc 516 ||| |||||||||||||| Sbjct: 529 gcgaggatgcaccacgtc 546
>gb|AY488135.1| Zea mays allene oxide synthase (aos) mRNA, complete cds Length = 1768 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 173 tgcgcgaccgcctggactactactacttccaggg 206 ||||||||||||| |||| ||||||||||||||| Sbjct: 191 tgcgcgaccgcctcgacttctactacttccaggg 224
>gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full insert mRNA sequence Length = 1870 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 134 aggtcccgggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggactact 193 |||| |||||| |||||||| | || ||| ||||| | | ||||||||||| |||| || Sbjct: 147 aggtgccgggcagctacggcatgccgttcgtctcggccatccgcgaccgcctcgacttct 206 Query: 194 actacttccagggc 207 |||||||||||||| Sbjct: 207 actacttccagggc 220
>gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) mRNA, complete cds Length = 1779 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 175 cgcgaccgcctggactactactacttccagggcg 208 ||||||||||| |||| ||||||||||||||||| Sbjct: 122 cgcgaccgcctcgacttctactacttccagggcg 155
>emb|AJ250864.1|HVU250864 Hordeum vulgare mRNA for allene oxide synthase (aos gene) Length = 1819 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 130 cgggaggtcccgggcggctacggcgttcccttcttctcgccgctgcgcgaccgcctggac 189 |||||||| |||||| |||||||| | || || ||||| | | ||||||||||| ||| Sbjct: 132 cgggaggtgccgggcagctacggcctgccgtttgtctcggccatccgcgaccgcctcgac 191 Query: 190 tactactacttccagggc 207 | |||||||||||||||| Sbjct: 192 ttctactacttccagggc 209
>emb|AJ251304.1|HVU251304 Hordeum vulgare mRNA for allene oxide synthase (aos2 gene) Length = 1722 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 175 cgcgaccgcctggactactactacttccagggcg 208 ||||||||||| |||| ||||||||||||||||| Sbjct: 118 cgcgaccgcctcgacttctactacttccagggcg 151
>gb|AY104188.1| Zea mays PCO060855 mRNA sequence Length = 1768 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 173 tgcgcgaccgcctggactactactacttccaggg 206 ||||||||||||| |||| ||||||||||||||| Sbjct: 191 tgcgcgaccgcctcgacttctactacttccaggg 224
>ref|NM_187610.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 44 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 103 Query: 206 g 206 | Sbjct: 104 g 104
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 6577163 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 6577222 Query: 206 g 206 | Sbjct: 6577223 g 6577223 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 31462585 ccacggtggtgcgcctcaacatgccgcccgggccgttc 31462548 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gccgccgacccccgccacgc 464 |||||||||||||||||||| Sbjct: 13231833 gccgccgacccccgccacgc 13231852 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 319412 cgccgccgacccccgccacg 319431
>gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage seedling allene oxide synthase (AOS) gene, complete cds Length = 2465 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 439 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 498 Query: 206 g 206 | Sbjct: 499 g 499
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 119925 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 119984 Query: 206 g 206 | Sbjct: 119985 g 119985
>gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxide synthase mRNA, complete cds Length = 1775 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 161 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 220 Query: 206 g 206 | Sbjct: 221 g 221
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 6576376 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 6576435 Query: 206 g 206 | Sbjct: 6576436 g 6576436 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 31553101 ccacggtggtgcgcctcaacatgccgcccgggccgttc 31553064 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gccgccgacccccgccacgc 464 |||||||||||||||||||| Sbjct: 13228608 gccgccgacccccgccacgc 13228627 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 319410 cgccgccgacccccgccacg 319429
>gb|AY055775.1| Oryza sativa allene oxide synthase (AOS) mRNA, complete cds Length = 1809 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 170 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 229 Query: 206 g 206 | Sbjct: 230 g 230
>dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K11, full insert sequence Length = 1974 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 307 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 366 Query: 206 g 206 | Sbjct: 367 g 367
>dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A10, full insert sequence Length = 1843 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 146 gctacggcgttcccttcttctcgccgctgcgcgaccgcctggactactactacttccagg 205 |||||||||| || ||| ||||| || ||||||||||||| || | ||||||||| |||| Sbjct: 184 gctacggcgtgccgttcgtctcggcggtgcgcgaccgcctcgatttctactacttgcagg 243 Query: 206 g 206 | Sbjct: 244 g 244
>emb|AJ318870.1|HVU318870 Hordeum vulgare mRNA for fatty acid hydroperoxide lyase (13-hpl gene) Length = 1673 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 169 ccgctgcgcgaccgcctggactactactacttccagggcgcggaggagtacttccg 224 ||||| || |||||||||||||||| || ||||||||| | ||||||| |||||| Sbjct: 136 ccgctccgggaccgcctggactacttctggttccagggccccgaggagttcttccg 191
>ref|XM_469909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1682 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 263 ccacggtggtgcgcctcaacatgccgcccgggccgttc 300
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 130011 ccacggtggtgcgcctcaacatgccgcccgggccgttc 130048
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 33215 ccacggtggtgcgcctcaacatgccgcccgggccgttc 33252
>dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynthetic gene cluster, complete cds Length = 27448 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 ccgcgtcgtcgccttcctcgac 324 |||||||||||||||||||||| Sbjct: 10924 ccgcgtcgtcgccttcctcgac 10945
>dbj|AB116527.1| Oryza sativa (japonica cultivar-group) aos mRNA for allene oxide synthase, complete cds Length = 1918 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 386 ccacggtggtgcgcctcaacatgccgcccgggccgttc 423
>dbj|AK068620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K19, full insert sequence Length = 1997 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 480 ccacggtggtgcgcctcaacatgccgcccgggccgttc 517
>dbj|AK066137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054B10, full insert sequence Length = 3951 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 251 ccaccgtgctgcgcgtcaacatgccccccgggccgttc 288 |||| ||| ||||| |||||||||| |||||||||||| Sbjct: 2992 ccacggtggtgcgcctcaacatgccgcccgggccgttc 2955
>dbj|AB090813.1| Anopheles gambiae retrotransposon RTAg4 DNA, complete sequence Length = 7072 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 acagctccggcagcagcgacag 92 |||||||||||||||||||||| Sbjct: 1947 acagctccggcagcagcgacag 1968
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 303 ccgcgtcgtcgccttcctcgacgcgcgca 331 ||||||| |||| |||||||||||||||| Sbjct: 213009 ccgcgtcttcgcgttcctcgacgcgcgca 213037
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cccgcgtcgtcgccttcctcg 322 ||||||||||||||||||||| Sbjct: 18459420 cccgcgtcgtcgccttcctcg 18459440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 cccgcgtcgtcgccttcctcg 322 ||||||||||||||||||||| Sbjct: 11391957 cccgcgtcgtcgccttcctcg 11391937
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 caccgccaactcccgcgtcgtcgcc 315 |||||||||||||||||||| |||| Sbjct: 1319571 caccgccaactcccgcgtcggcgcc 1319547
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cccgcgtcgtcgccttcctcg 322 ||||||||||||||||||||| Sbjct: 18385646 cccgcgtcgtcgccttcctcg 18385666 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 cccgcgtcgtcgccttcctcg 322 ||||||||||||||||||||| Sbjct: 11391628 cccgcgtcgtcgccttcctcg 11391608
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cccgcgtcgtcgccttcctcg 322 ||||||||||||||||||||| Sbjct: 145007 cccgcgtcgtcgccttcctcg 145027
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cccgcgtcgtcgccttcctcg 322 ||||||||||||||||||||| Sbjct: 111319 cccgcgtcgtcgccttcctcg 111339
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 ccgcatcgcccggaacggcggcgc 251 ||||||||||||| |||||||||| Sbjct: 1209975 ccgcatcgcccggcacggcggcgc 1209952
>ref|NM_187634.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1344 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 903 cgccgccgacccccgccacg 922
>ref|NM_001030993.1| Gallus gallus programmed cell death 6 interacting protein (PDCD6IP), mRNA Length = 5224 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ttagacttgcgcttgctcac 45 |||||||||||||||||||| Sbjct: 4772 ttagacttgcgcttgctcac 4753
>ref|XM_450377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2988 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ccaacagctccggcagcagc 87 |||||||||||||||||||| Sbjct: 2641 ccaacagctccggcagcagc 2660
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 acggcggcgccaccgtgctgcgcg 265 |||||||||| ||||||||||||| Sbjct: 3657962 acggcggcgcaaccgtgctgcgcg 3657985
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 ccgccaactcccgcgtcgtcgcct 316 |||||| ||||||||||||||||| Sbjct: 129344 ccgccatctcccgcgtcgtcgcct 129367
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 acttccgctcccgcatcgcc 237 |||||||||||||||||||| Sbjct: 296559 acttccgctcccgcatcgcc 296540
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 cctcgccgccgcgcggatgc 508 |||||||||||||||||||| Sbjct: 135125 cctcgccgccgcgcggatgc 135106
>ref|XM_416227.1| PREDICTED: Gallus gallus similar to nuclear factor, erythroid derived 2,-like 1 (LOC417988), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 accgcccactcgccttcatg 441 |||||||||||||||||||| Sbjct: 128 accgcccactcgccttcatg 109
>gb|AY658195.1| Synthetic construct Peudomonas aeruginosa clone FLH044546.01F PA3959 gene, partial cds Length = 735 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cgctgcgcgaccgcctggac 189 |||||||||||||||||||| Sbjct: 665 cgctgcgcgaccgcctggac 684
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 46940 cgccgccgacccccgccacg 46959
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacgccgc 467 ||||||||||||| |||||||||| Sbjct: 770813 cgccgccgaccccggccacgccgc 770836
>emb|X17252.1|XFCFXG X.flavus cfxLSQFP genes for ribulose-1,5-bisphosphate carboxylase/ oxygenase (EC 4.1.1.39), fructose-bisphosphatase (EC 3.1.3.11), and phosphoribulokinase (EC 2.7.1.19) Length = 5565 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cttccgctcccgcatcgccc 238 |||||||||||||||||||| Sbjct: 3100 cttccgctcccgcatcgccc 3119
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 ttgcgcttgctcaccctgcc 51 |||||||||||||||||||| Sbjct: 2342830 ttgcgcttgctcaccctgcc 2342849
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gccgacccccgccacgccgcactc 471 ||||||| |||||||||||||||| Sbjct: 45944 gccgaccaccgccacgccgcactc 45921
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gccgacccccgccacgccgcactc 471 ||||||| |||||||||||||||| Sbjct: 39304 gccgaccaccgccacgccgcactc 39281
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 cttcggcggctaccgcccac 430 |||||||||||||||||||| Sbjct: 197276 cttcggcggctaccgcccac 197257
>emb|AJ720564.1| Gallus gallus mRNA for hypothetical protein, clone 20e18 Length = 5224 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ttagacttgcgcttgctcac 45 |||||||||||||||||||| Sbjct: 4772 ttagacttgcgcttgctcac 4753
>emb|AJ586807.1| Setaria viridis tub2 gene for beta tubulin, exons 1-3 Length = 1763 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 1189 cgccgccgacccccgccacg 1208
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 344 tcctcgacgacgccnaggtcgac 366 |||||||||||||| |||||||| Sbjct: 3187915 tcctcgacgacgccgaggtcgac 3187893 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cggcgccaccgtgctgcgcg 265 |||||||||||||||||||| Sbjct: 2918538 cggcgccaccgtgctgcgcg 2918519
>emb|CR389293.1| Gallus gallus finished cDNA, clone ChEST115a18 Length = 1714 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ttagacttgcgcttgctcac 45 |||||||||||||||||||| Sbjct: 1282 ttagacttgcgcttgctcac 1263
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ccaacagctccggcagcagc 87 |||||||||||||||||||| Sbjct: 5048100 ccaacagctccggcagcagc 5048119
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 caacagctccggcagcagcgacag 92 ||||| |||||||||||||||||| Sbjct: 8035679 caacaactccggcagcagcgacag 8035656
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 ccgccaactcccgcgtcgtcgcct 316 |||||| ||||||||||||||||| Sbjct: 904806 ccgccatctcccgcgtcgtcgcct 904783
>gb|AE004814.1| Pseudomonas aeruginosa PAO1, section 375 of 529 of the complete genome Length = 10042 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cgctgcgcgaccgcctggac 189 |||||||||||||||||||| Sbjct: 740 cgctgcgcgaccgcctggac 759
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gccgctgcgcgaccgcctgg 187 |||||||||||||||||||| Sbjct: 6140301 gccgctgcgcgaccgcctgg 6140320 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cggcgccaccgtgctgcgcg 265 |||||||||||||||||||| Sbjct: 2885013 cggcgccaccgtgctgcgcg 2884994
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cggcggcgccaccgtgctgc 262 |||||||||||||||||||| Sbjct: 2948398 cggcggcgccaccgtgctgc 2948379 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgccgctgcgcgaccgcctg 186 |||||||||||||||||||| Sbjct: 1522763 cgccgctgcgcgaccgcctg 1522744 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgccgccgcgcggatgcacc 511 |||||||||||||||||||| Sbjct: 260530 cgccgccgcgcggatgcacc 260511
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ccaacagctccggcagcagc 87 |||||||||||||||||||| Sbjct: 50217 ccaacagctccggcagcagc 50236
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 caacagctccggcagcagcgacag 92 ||||| |||||||||||||||||| Sbjct: 73876 caacaactccggcagcagcgacag 73853
>dbj|AK121740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H13, full insert sequence Length = 2990 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ccaacagctccggcagcagc 87 |||||||||||||||||||| Sbjct: 2643 ccaacagctccggcagcagc 2662
>dbj|AK110694.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-A08, full insert sequence Length = 1023 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 ccgccaactcccgcgtcgtcgcct 316 |||||| ||||||||||||||||| Sbjct: 244 ccgccatctcccgcgtcgtcgcct 267
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cgctgcgcgaccgcctggac 189 |||||||||||||||||||| Sbjct: 3782866 cgctgcgcgaccgcctggac 3782885
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cggcgccaccgtgctgcgcg 265 |||||||||||||||||||| Sbjct: 4777886 cggcgccaccgtgctgcgcg 4777905
>gb|AY870250.1| Uncultured organism clone B1 putative lipase gene, complete cds Length = 948 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 actacttccagggcgcggag 213 |||||||||||||||||||| Sbjct: 671 actacttccagggcgcggag 690
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cagcctcgccgccgcgcgga 505 |||||||||||||||||||| Sbjct: 1506106 cagcctcgccgccgcgcgga 1506087
>gb|AY729826.1| Spumella uniguttata beta-tubulin gene, partial cds Length = 1286 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 956 cgccgccgacccccgccacg 975
>gb|K03281.1|CRETBBB Chlamydomonas reinhardtii beta-2 tubulin gene, complete cds Length = 2461 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 1578 cgccgccgacccccgccacg 1597
>gb|M10064.1|CRETBBA Chlamydomonas reinhardtii beta-1 tubulin gene, complete cds Length = 2668 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgccgccgacccccgccacg 463 |||||||||||||||||||| Sbjct: 1682 cgccgccgacccccgccacg 1701
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gccgccgacccccgccacgc 464 |||||||||||||||||||| Sbjct: 88008 gccgccgacccccgccacgc 87989 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,843,627 Number of Sequences: 3902068 Number of extensions: 2843627 Number of successful extensions: 67956 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65107 Number of HSP's gapped (non-prelim): 2833 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
