ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27b09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 228 bits (115), Expect = 1e-56 Identities = 267/315 (84%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 178 cgtcggcggacgcgtggctgcacgaggagttcgagacggagggcaacgtgcgggcgggct 237 ||||||||||| |||||||| ||||| ||||| |||||||||||||||||| |||| || Sbjct: 200 cgtcggcggactcgtggctgtacgagaagttcacgacggagggcaacgtgcgcgcggact 259 Query: 238 acgacgcgcgggggcggcaggtagcgtccatcgtcctcgac-cggcagtccggcggcgcc 296 || |||||| ||||| |||||| |||| | |||| ||| | |||||||||||||||| Sbjct: 260 acaacgcgcaggggcagcaggtgacgtctctgatcct-gacgcagcagtccggcggcgcc 318 Query: 297 ttccggtcccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtcccc 356 ||| | || |||| | ||||| ||||| |||||||| ||||||||| ||| |||| Sbjct: 319 ttcagctcgcggcagaagtacctgtacggggagttcagcatccagatgaggctgatcccg 378 Query: 357 ggcaactccgccggcaccgtcgcctccttctacctgtcgtcgggcaacgagccggggcac 416 ||||||||||| |||||||| ||||||||||||||||||||||| ||| ||| |||||| Sbjct: 379 ggcaactccgcgggcaccgtgacctccttctacctgtcgtcgggcgacgggcccgggcac 438 Query: 417 gacgagatcgacatggagttcatgggcaacagcacgggccagccggtggcgctcaacacc 476 |||||||||||||||||||||||||||||| || || ||||| |||| ||| |||||| Sbjct: 439 gacgagatcgacatggagttcatgggcaacgccagcgggcagcccgtggtgctgaacacc 498 Query: 477 aacgtgtgggccaac 491 ||||||||||||||| Sbjct: 499 aacgtgtgggccaac 513
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 172 bits (87), Expect = 7e-40 Identities = 153/175 (87%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 298 tacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcacc 357 Query: 375 gtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatggag 434 ||| | | ||||||||| ||||||||| ||| |||||||||||||||||||||||| Sbjct: 358 gtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatggag 417 Query: 435 ttcatgggcaacagcacgggccagccggtggcgctcaacaccaacgtgtgggcca 489 |||||||||||| | || |||||||||| ||| ||||| ||||||||||||| Sbjct: 418 ttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggcca 472
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 172 bits (87), Expect = 7e-40 Identities = 153/175 (87%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 323 tacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcacc 382 Query: 375 gtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatggag 434 ||| | | ||||||||| ||||||||| ||| |||||||||||||||||||||||| Sbjct: 383 gtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatggag 442 Query: 435 ttcatgggcaacagcacgggccagccggtggcgctcaacaccaacgtgtgggcca 489 |||||||||||| | || |||||||||| ||| ||||| ||||||||||||| Sbjct: 443 ttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggcca 497
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 137 bits (69), Expect = 4e-29 Identities = 119/133 (89%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 375 gtcgcctccttctacctgtcgt-cgggcaacgagccggggcacgacgagatcgacatgga 433 ||| |||||||||||||| ||| |||| | | | | |||||||||||||||||||| || Sbjct: 315 gtcacctccttctacctgacgtccggggagggcgac-gggcacgacgagatcgacatcga 373 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 374 gttcatgggcaac 386
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 137 bits (69), Expect = 4e-29 Identities = 119/133 (89%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 375 gtcgcctccttctacctgtcgt-cgggcaacgagccggggcacgacgagatcgacatgga 433 ||| |||||||||||||| ||| |||| | | | | |||||||||||||||||||| || Sbjct: 315 gtcacctccttctacctgacgtccggggagggcgac-gggcacgacgagatcgacatcga 373 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 374 gttcatgggcaac 386
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 125 bits (63), Expect = 1e-25 Identities = 147/175 (84%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||| |||||| ||||||||||| ||||||||||| ||| || ||||||||||||||| Sbjct: 294 tacctttacggcgagttcagcgtcgagatgaagctcatccgggggaactccgccggcacc 353 Query: 375 gtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatggag 434 ||| | | ||||||||| || || ||| ||| |||| ||||||||||||||||||| Sbjct: 354 gtctcgtgcttctacctctcttccggcgacggcgacgggcgcgacgagatcgacatggag 413 Query: 435 ttcatgggcaacagcacgggccagccggtggcgctcaacaccaacgtgtgggcca 489 |||||||||||| | || |||||||||| ||| ||||||||||||||||||| Sbjct: 414 ttcatgggcaactcgagcgggcagccggtggtgctgaacaccaacgtgtgggcca 468
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 253 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 312 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 313 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 372 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 373 gttcatgggcaac 385
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 258 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 317 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 318 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 377 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 378 gttcatgggcaac 390
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 121 bits (61), Expect = 2e-24 Identities = 117/133 (87%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 266 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 325 Query: 375 gtcgcctccttctacctgtcgtc-gggcaacgagccggggcacgacgagatcgacatgga 433 ||| |||||||||||||| |||| ||| | | | | || || |||||||||||||| || Sbjct: 326 gtcacctccttctacctgacgtctggggagggcgac-ggccatgacgagatcgacatcga 384 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 385 gttcatgggcaac 397
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 8321926 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 8321985 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 8321986 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 8322045 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 8322046 gttcatgggcaac 8322058 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 cgcgtgcgccgtcgccgtggccgtggcc 155 |||| ||||||||||||| ||||||||| Sbjct: 18227903 cgcgcgcgccgtcgccgtcgccgtggcc 18227930 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 342 atgaagctcgtccccggcaactccgccggcaccgtc 377 |||| ||||||| || ||||||||||||||||||| Sbjct: 8379189 atgatgctcgtcgccaacaactccgccggcaccgtc 8379154 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 cgccgtcgccgtggccgtggccct 157 |||||| ||||||||||||||||| Sbjct: 4004616 cgccgtggccgtggccgtggccct 4004639
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 249 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 308 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 309 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 368 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 369 gttcatgggcaac 381
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 121 bits (61), Expect = 2e-24 Identities = 117/133 (87%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 254 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 313 Query: 375 gtcgcctccttctacctgtcgtc-gggcaacgagccggggcacgacgagatcgacatgga 433 ||| |||||||||||||| |||| ||| | | | | || || |||||||||||||| || Sbjct: 314 gtcacctccttctacctgacgtctggggagggcgac-ggccatgacgagatcgacatcga 372 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 373 gttcatgggcaac 385
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 62035 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 62094 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 62095 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 62154 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 62155 gttcatgggcaac 62167 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 342 atgaagctcgtccccggcaactccgccggcaccgtc 377 |||| ||||||| || ||||||||||||||||||| Sbjct: 119298 atgatgctcgtcgccaacaactccgccggcaccgtc 119263
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 258 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 317 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 318 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 377 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 378 gttcatgggcaac 390
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 121 bits (61), Expect = 2e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 253 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 312 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| ||||||||||||| || || ||| | | || ||||||||||||||||| || Sbjct: 313 cgtcacctccttctacctctcctccggcgagggcgacggccacgacgagatcgacatcga 372 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 373 gttcatgggcaac 385
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 105 bits (53), Expect = 1e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| |||||||||| |||||||||||||| |||||||||||| || || Sbjct: 154 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 213 Query: 375 gtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatggag 434 ||| |||||||||||||| |||| ||| | | | |||||||||||||||||||||| Sbjct: 214 gtcacctccttctacctgacgtccggcgagggcgacgagcacgacgagatcgacatggag 273 Query: 435 ttcatgggcaacagcacgggccagccggtggcgctcaacaccaacgtgtgggccaac 491 |||||||||||| || ||| ||| || ||||||||| ||||||||||||||| Sbjct: 274 ttcatgggcaactccagcggctccccgacggtgctcaacacgaacgtgtgggccaac 330
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 103 bits (52), Expect = 5e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 314 cagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtcg 373
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 259 tacctcttcggcgagttcagcgtccggatgaagctcgtcgacggcaactccgccggcacc 318 Query: 375 gtcgcctccttctacctgtcgtc 397 ||| |||||||||| ||| |||| Sbjct: 319 gtcacctccttctatctgacgtc 341 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatggg 442 ||||| ||||||||||| ||||||||||| Sbjct: 358 cacgatgagatcgacattgagttcatggg 386
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 99.6 bits (50), Expect = 8e-18 Identities = 94/108 (87%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 320 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcg 379 Query: 399 ggcaacgagccggggcacgacgagatcgacatggagttcatgggcaac 446 | | | ||| |||||||||||||||| | |||||| |||||||| Sbjct: 380 ---caggggacggcgcacgacgagatcgacttcgagttcctgggcaac 424
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 99.6 bits (50), Expect = 8e-18 Identities = 94/108 (87%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 214 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcg 273 Query: 399 ggcaacgagccggggcacgacgagatcgacatggagttcatgggcaac 446 | | | ||| |||||||||||||||| | |||||| |||||||| Sbjct: 274 ---caggggacggcgcacgacgagatcgacttcgagttcctgggcaac 318
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| ||||| ||||||||||||| Sbjct: 246 ctacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcac 305 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| || ||||||||||||||||| ||| ||| |||||||||||||||| | || Sbjct: 306 cgtcaccgccttctacctgtcgtcgcagaac---tcggagcacgacgagatcgacttcga 362 Query: 434 gttcatgggcaacagcacggg 454 |||| |||| ||||| ||||| Sbjct: 363 gttcctggggaacaggacggg 383
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| ||||| ||||||||||||| Sbjct: 243 ctacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcac 302 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| || ||||||||||||||||| ||| ||| |||||||||||||||| | || Sbjct: 303 cgtcaccgccttctacctgtcgtcgcagaac---tcggagcacgacgagatcgacttcga 359 Query: 434 gttcatgggcaacagcacggg 454 |||| |||| ||||| ||||| Sbjct: 360 gttcctggggaacaggacggg 380
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 89.7 bits (45), Expect = 8e-15 Identities = 113/133 (84%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| ||||| ||| |||||||||||||| |||||||||||||||||| Sbjct: 251 tacctcttcggcgagttcgaggtcaagatgaagctcgtcgacggcaactccgccggcaca 310 Query: 375 gtcgcctccttctacctgtcgtcgggcaacgagc-cggggcacgacgagatcgacatgga 433 ||| |||||||||||||| | || ||| | |||| || ||||||||||||||||| || Sbjct: 311 gtcacctccttctacctgacttccggcga-gagcgcgacccacgacgagatcgacatcga 369 Query: 434 gttcatgggcaac 446 ||||||||||||| Sbjct: 370 gttcatgggcaac 382
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 316 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcg 375
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 316 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcg 375
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 ||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28761548 cagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 ||||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 28749768 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||||||||||||||||||||||||||| Sbjct: 28773893 aagctcgtccccggcaactccgccggcaccgtc 28773861 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| | |||||| |||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaac 13230434 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctcggccgccgcgcgcaccg 30 |||||||||||||||||||| Sbjct: 24913434 ctcggccgccgcgcgcaccg 24913453
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 ||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 69323 cagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 ||||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 57543 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||||||||||||||||||||||||||| Sbjct: 81668 aagctcgtccccggcaactccgccggcaccgtc 81636
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 ||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 162114 cagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 ||||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 150334 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||||| Sbjct: 242 tacctcttcggcgagttccaggtccggatgaagctcgtcgacggcaactccgccggcacc 301 Query: 375 gtcgcctccttctacctg 392 ||| |||||||||||||| Sbjct: 302 gtcacctccttctacctg 319 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||||| ||||||||||||||| Sbjct: 341 cacgacgagatcgacatcgagttcatgggcaac 373
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 83.8 bits (42), Expect = 5e-13 Identities = 122/148 (82%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| |||| ||||||||||||| Sbjct: 295 ctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcac 354 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 ||| || ||||||||||||||||| ||| ||| |||||||||||||||| | || Sbjct: 355 agtcaccgccttctacctgtcgtcgcagaac---tcggagcacgacgagatcgacttcga 411 Query: 434 gttcatgggcaacagcacgggccagccg 461 |||| |||| ||||| ||||| |||||| Sbjct: 412 gttcttggggaacaggacggggcagccg 439
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 83.8 bits (42), Expect = 5e-13 Identities = 122/148 (82%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| |||| ||||||||||||| Sbjct: 256 ctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcac 315 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| || |||||||||||||||| ||| ||| |||||||||||||||| | || Sbjct: 316 cgtcaccgccttctacctgtcgtcacagaac---tcggagcacgacgagatcgacttcga 372 Query: 434 gttcatgggcaacagcacgggccagccg 461 |||| |||| ||||| ||||| |||||| Sbjct: 373 gttcttggggaacaggacggggcagccg 400
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||| ||| ||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 208 cagatcaagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcg 267
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| |||||||||| |||||||||||||| |||||||||||| || || Sbjct: 327 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 386 Query: 375 gtcgcctccttctacctgtcgtc 397 ||| |||||||||||||| |||| Sbjct: 387 gtcacctccttctacctgacgtc 409 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacatggagttcatgggcaacagcacgggccagccggtggcgctcaacac 475 ||||||||||||||||||||||||||||||| || ||| ||| || ||||||||| Sbjct: 419 cgacgagatcgacatggagttcatgggcaactccagcggctccccgacggtgctcaacac 478 Query: 476 caacgtgtgggccaac 491 ||||||||||||||| Sbjct: 479 gaacgtgtgggccaac 494
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||||||||||||||||||||||||||||||| || ||| |||| |||||||| Sbjct: 339 aagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcg 392
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||||||||||||||||||||||||||||||| || ||| |||| |||||||| Sbjct: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcg 382
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 73.8 bits (37), Expect = 5e-10 Identities = 120/147 (81%), Gaps = 3/147 (2%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || |||||||||||| |||| ||||||| ||||| Sbjct: 266 ctacctcttcggccacttcagcatgcacatgaagctcgtcggcggcgactccgcgggcac 325 Query: 374 cgtcgcctccttctacctgtcgtcgggcaacgagccggggcacgacgagatcgacatgga 433 |||| | ||||||||||||||||| ||| ||| |||||||||||||||| || Sbjct: 326 cgtcacggccttctacctgtcgtcgcagaact---cggagcacgacgagatcgactccga 382 Query: 434 gttcatgggcaacagcacgggccagcc 460 |||| |||||||| | ||||| ||||| Sbjct: 383 gttcctgggcaaccggacggggcagcc 409
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| ||||| ||||||||||||| Sbjct: 113282 ctacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcac 113341 Query: 374 cgtcgcctccttctac 389 |||| || |||||||| Sbjct: 113342 cgtcaccgccttctac 113357 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaacagcacggg 454 |||||||||||||||| | |||||| |||| ||||| ||||| Sbjct: 113473 gcacgacgagatcgacttcgagttcctggggaacaggacggg 113514
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| ||||| ||||||||||||| Sbjct: 12901 ctacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcac 12960 Query: 374 cgtcgcctccttctac 389 |||| || |||||||| Sbjct: 12961 cgtcaccgccttctac 12976 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaacagcacggg 454 |||||||||||||||| | |||||| |||| ||||| ||||| Sbjct: 13092 gcacgacgagatcgacttcgagttcctggggaacaggacggg 13133
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| ||||| ||||||||||||| Sbjct: 19010084 ctacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcac 19010143 Query: 374 cgtcgcctccttctac 389 |||| || |||||||| Sbjct: 19010144 cgtcaccgccttctac 19010159 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 gccgcgtgcgccgtcgccgtggccgt 151 |||||||||||||||||||| ||||| Sbjct: 26411423 gccgcgtgcgccgtcgccgtcgccgt 26411448 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaacagcacggg 454 |||||||||||||||| | |||||| |||| ||||| ||||| Sbjct: 19010275 gcacgacgagatcgacttcgagttcctggggaacaggacggg 19010316 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcctccaagaagcagagcat 85 |||||||||||||||||||| Sbjct: 3814713 tcctccaagaagcagagcat 3814732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 346 agctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaac 446 |||||||||||||||| | |||||| |||||||| Sbjct: 10359113 gcacgacgagatcgacttcgagttcctgggcaac 10359146
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 346 agctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaac 446 |||||||||||||||| | |||||| |||||||| Sbjct: 1535 gcacgacgagatcgacttcgagttcctgggcaac 1568
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 346 agctcgtccccggcaactccgccggcaccgtcgcctccttctac 389 |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaac 446 |||||||||||||||| | |||||| |||||||| Sbjct: 124923 gcacgacgagatcgacttcgagttcctgggcaac 124956
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || || ||||||||| ||||| ||||||||||||| Sbjct: 19168733 ctacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcac 19168792 Query: 374 cgtcgcctccttctac 389 |||| || |||||||| Sbjct: 19168793 cgtcaccgccttctac 19168808 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 gccgcgtgcgccgtcgccgtggccgt 151 |||||||||||||||||||| ||||| Sbjct: 26737274 gccgcgtgcgccgtcgccgtcgccgt 26737299 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaacagcacggg 454 |||||||||||||||| | |||||| |||| ||||| ||||| Sbjct: 19168924 gcacgacgagatcgacttcgagttcctggggaacaggacggg 19168965 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcctccaagaagcagagcat 85 |||||||||||||||||||| Sbjct: 3823407 tcctccaagaagcagagcat 3823426
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 |||||||||||||||||||| ||||||||||| || ||| ||||||||||||| Sbjct: 265 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcg 318
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcaccgt 376 ||||| |||| |||||||| | |||||||||||||||||||| | || ||||||| || Sbjct: 243 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 302 Query: 377 cgcctccttctacctg 392 |||| ||||||||||| Sbjct: 303 cgccaccttctacctg 318
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcaccgt 376 ||||| |||| |||||||| | |||||||||||||||||||| | || ||||||| || Sbjct: 311 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 370 Query: 377 cgcctccttctacctg 392 |||| ||||||||||| Sbjct: 371 cgccaccttctacctg 386
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||||||||| || |||||||||||||||||||| ||||||| || |||||| Sbjct: 333 aagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcg 386
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 357 ggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 381 ggcaactccgccggcaccgtcaccgcctactacctgtcgtcg 422
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtcg 398 ||||||||||| || |||||||||||||||||||| ||||||| || |||||| Sbjct: 340 aagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcgtcg 393
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcaccgt 376 ||||| |||| |||||||| | |||||||||||||||||||| | || ||||||| || Sbjct: 32962 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 32903 Query: 377 cgcctccttctac 389 |||| |||||||| Sbjct: 32902 cgccaccttctac 32890 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| | |||||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaac 29191
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcaccgt 376 ||||| |||| |||||||| | |||||||||||||||||||| | || ||||||| || Sbjct: 30557254 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 30557195 Query: 377 cgcctccttctac 389 |||| |||||||| Sbjct: 30557194 cgccaccttctac 30557182 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| |||||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaac 30508388 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| | |||||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaac 30553483 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||| ||| | ||||||||||||||||| Sbjct: 30508603 aagctcgtcgccgacgactccgccggcaccgtc 30508571 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 23556696 ctggcggcagcggcgtcgtcgtcg 23556719
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtcgcctccttcta 388 ||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 223 aagctcgtcccgggggactccgccggcaccgtcgccaccttcta 266
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggca 444 |||||||||||||||||||||||| |||||| Sbjct: 361 cacgacgagatcgacatggagttcctgggca 391
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggca 444 |||||||||||||||||||||||| |||||| Sbjct: 17438276 cacgacgagatcgacatggagttcctgggca 17438306
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtcgcctccttctacctgtcgtc 397 ||||| ||||| || ||||| ||||| |||||||||||| || |||||||||| ||||| Sbjct: 377 cagatcaagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtc 435
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggca 444 |||||||||||||||||||||||| |||||| Sbjct: 106500 cacgacgagatcgacatggagttcctgggca 106530
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacatggagttcatgggcaac 446 |||||||||||||||| |||||||| |||||||| Sbjct: 799 gcacgacgagatcgacctggagttcctgggcaac 766
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaac 446 |||||||||||||||| |||||||| |||||||| Sbjct: 405 gcacgacgagatcgacctggagttcctgggcaac 438
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| |||||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaac 348 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||| ||| | ||||||||||||||||| Sbjct: 244 aagctcgtcgccgacgactccgccggcaccgtc 276
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| |||||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaac 141765 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||| ||| | ||||||||||||||||| Sbjct: 141980 aagctcgtcgccgacgactccgccggcaccgtc 141948
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| |||||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaac 411 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||| ||| | ||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtc 339
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgtc 377 ||||| ||| ||||||| || |||||||||||||||||| Sbjct: 320 cagatcaaggtcgtccctggtaactccgccggcaccgtc 358
>ref|NM_194048.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 cgtgcgccgtcgccgtggccgtggcc 155 |||||||||||||||| ||||||||| Sbjct: 238 cgtgcgccgtcgccgtcgccgtggcc 213
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 365 cgccggcaccgtcgcctccttc 386 |||||||||||||||||||||| Sbjct: 3381208 cgccggcaccgtcgcctccttc 3381229
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 gccgcgtgcgccgtcgccgtggccgt 151 |||||||||||||||||||| ||||| Sbjct: 124848 gccgcgtgcgccgtcgccgtcgccgt 124873
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 363 tccgccggcaccgtcgcctccttctacctgtcgt 396 ||||||||||||||| || ||| ||||||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgt 396
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 cgtgcgccgtcgccgtggccgtggcc 155 |||||||||||||||| ||||||||| Sbjct: 14962958 cgtgcgccgtcgccgtcgccgtggcc 14962933 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgtcgccgtggccgtggcc 155 |||||||||||||||||||| Sbjct: 35910125 ccgtcgccgtggccgtggcc 35910144
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 tgaagctcgtccccggcaactc 364 |||||||||||||||||||||| Sbjct: 467 tgaagctcgtccccggcaactc 488
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaaca 447 ||||||||||||||| | |||||| ||||||||| Sbjct: 74 cacgacgagatcgacttcgagttcctgggcaaca 107 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 344 gaagctcgtccccggcaactccgccggcaccgt 376 |||||||||||| ||||||||||| || ||||| Sbjct: 7 gaagctcgtcccgggcaactccgctggtaccgt 39
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 tcgtcctcgaccggcagtccggcggc 293 ||||||||||||||||| |||||||| Sbjct: 8774793 tcgtcctcgaccggcagcccggcggc 8774818
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 130 cgtgcgccgtcgccgtggccgtggcc 155 |||||||||||||||| ||||||||| Sbjct: 147784 cgtgcgccgtcgccgtcgccgtggcc 147759
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacatggagttcatgggcaac 446 |||||||||||||||| | |||||| |||||||| Sbjct: 416 gcacgacgagatcgacttcgagttcctgggcaac 449
>dbj|AB070941.1| Streptomyces avermitilis polyketide-1 biosynthetic gene cluster Length = 24045 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 tcgtcctcgaccggcagtccggcggc 293 ||||||||||||||||| |||||||| Sbjct: 785 tcgtcctcgaccggcagcccggcggc 810
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 cgaccggcagtccggcggcgc 295 ||||||||||||||||||||| Sbjct: 1253673 cgaccggcagtccggcggcgc 1253653
>ref|XM_450190.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cgccgtcgccgtggccgtggc 154 ||||||||||||||||||||| Sbjct: 658 cgccgtcgccgtggccgtggc 638
>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase (OSJNBa0001O14.5), mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggag 434 ||||||||||||||||||||| Sbjct: 418 cacgacgagatcgacatggag 438
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 cgcgtgcgccgtcgccgtggc 148 ||||||||||||||||||||| Sbjct: 3089551 cgcgtgcgccgtcgccgtggc 3089531
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| |||||||| | |||||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaac 357
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 aacaccaacgtgtgggccaac 491 ||||||||||||||||||||| Sbjct: 15 aacaccaacgtgtgggccaac 35
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gctcggccgccgcgcgcaccg 30 ||||||||||||||||||||| Sbjct: 2844476 gctcggccgccgcgcgcaccg 2844496
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gctcggccgccgcgcgcaccg 30 ||||||||||||||||||||| Sbjct: 4071961 gctcggccgccgcgcgcaccg 4071981
>emb|CR702150.2|CNS0G4QA Tetraodon nigroviridis full-length cDNA Length = 1091 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccctgctggcggcagtggcg 173 ||||||||||||||||||||| Sbjct: 538 gccctgctggcggcagtggcg 518
>emb|CR701638.2|CNS0G4C2 Tetraodon nigroviridis full-length cDNA Length = 1110 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccctgctggcggcagtggcg 173 ||||||||||||||||||||| Sbjct: 551 gccctgctggcggcagtggcg 531
>emb|CR701623.2|CNS0G4BN Tetraodon nigroviridis full-length cDNA Length = 1109 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccctgctggcggcagtggcg 173 ||||||||||||||||||||| Sbjct: 553 gccctgctggcggcagtggcg 533
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gtcgccgtggccgtggccctg 158 ||||||||||||||||||||| Sbjct: 3862930 gtcgccgtggccgtggccctg 3862910
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 accggcagtccggcggcgccttccg 301 |||||||| |||||||||||||||| Sbjct: 334274 accggcaggccggcggcgccttccg 334250
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gctcggccgccgcgcgcaccg 30 ||||||||||||||||||||| Sbjct: 3778541 gctcggccgccgcgcgcaccg 3778561
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggag 434 ||||||||||||||||||||| Sbjct: 64029 cacgacgagatcgacatggag 64049
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggag 434 ||||||||||||||||||||| Sbjct: 20801630 cacgacgagatcgacatggag 20801650
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cgccgtcgccgtggccgtggc 154 ||||||||||||||||||||| Sbjct: 21149995 cgccgtcgccgtggccgtggc 21149975
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| | |||||| |||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaac 147622
>dbj|AK109723.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B05, full insert sequence Length = 2057 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cgccgtcgccgtggccgtggc 154 ||||||||||||||||||||| Sbjct: 805 cgccgtcgccgtggccgtggc 785
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccgtc 377 ||||||||| ||| | ||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtc 275
>dbj|AK072013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104K15, full insert sequence Length = 1418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cgccgtcgccgtggccgtggc 154 ||||||||||||||||||||| Sbjct: 678 cgccgtcgccgtggccgtggc 658
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gcggcagtggcgtcgtcgtcg 182 ||||||||||||||||||||| Sbjct: 1850827 gcggcagtggcgtcgtcgtcg 1850847
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggagttcatgggcaac 446 ||||||||||||||| | |||||| |||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaac 675
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cgccgtcgccgtggccgtggc 154 ||||||||||||||||||||| Sbjct: 20752 cgccgtcgccgtggccgtggc 20732
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gctcggccgccgcgcgcaccg 30 ||||||||||||||||||||| Sbjct: 3471357 gctcggccgccgcgcgcaccg 3471377
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 cacgacgagatcgacatggag 434 ||||||||||||||||||||| Sbjct: 20812894 cacgacgagatcgacatggag 20812914
>gb|AY834935.1| Hepatitis C virus isolate km43 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834934.1| Hepatitis C virus isolate km51 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834933.1| Hepatitis C virus isolate km5 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834932.1| Hepatitis C virus isolate km50 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834931.1| Hepatitis C virus isolate km47 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>dbj|D14199.1|HPCNS5A17 Hepatitis C virus gene for NS5, partial cds, isolate NE137 Length = 337 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 238 ggccctgctggcggcagtggc 218
>dbj|D16617.1|HPCNE137F Hepatitis C virus RNA for NS5, partial sequence Length = 1141 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 235 ggccctgctggcggcagtggc 215
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggcggacgcgtggctgcacg 201 |||||||||||||||||||| Sbjct: 692222 ggcggacgcgtggctgcacg 692203
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 40.1 bits (20), Expect = 6.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 ||||||||||| || ||| |||| | |||| ||||||| || ||||||||||||||| Sbjct: 240 ctacctctacgcccgcttcgacgtcgacatgatgctcgtcgccaacaactccgccggcac 299 Query: 374 cgtc 377 |||| Sbjct: 300 cgtc 303
>ref|NM_184943.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 gcgccgtcgccgtggccgtggccctgct 160 ||||||| ||||||||||||| |||||| Sbjct: 154 gcgccgtggccgtggccgtggtcctgct 181
>ref|NM_190505.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 318 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccgtcgccgtggccgtggcc 155 |||||||||||||||||||| Sbjct: 163 ccgtcgccgtggccgtggcc 144
>ref|XM_470487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 137 cgtcgccgtggccgtggccctgctggcg 164 ||||||||||||||||||| || ||||| Sbjct: 78 cgtcgccgtggccgtggccgtggtggcg 51
>ref|XM_472832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2280 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1102 ctggcggcagcggcgtcgtcgtcg 1079
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 342 atgaagctcgtccccggcaactccgccggcaccgtc 377 |||| ||||||| || ||||||||||||||||||| Sbjct: 186 atgatgctcgtcgccaacaactccgccggcaccgtc 151
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ctcgaccggcagtccggcgg 292 |||||||||||||||||||| Sbjct: 5119796 ctcgaccggcagtccggcgg 5119777
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcctccaagaagcagagcat 85 |||||||||||||||||||| Sbjct: 182385 tcctccaagaagcagagcat 182404
>gb|AC108947.5| Mus musculus BAC clone RP23-140A11 from chromosome 13, complete sequence Length = 187401 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 173061 ttcctcagcctgcaccatcc 173080
>gb|AF179339.1| Solar Lake Mat Clone920 dissimilatory sulfite reductase beta subunit (dsrB) gene, partial cds Length = 423 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gctgcacgaggagttcgaga 213 |||||||||||||||||||| Sbjct: 159 gctgcacgaggagttcgaga 178
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 137 cgtcgccgtggccgtggccctgctggcg 164 ||||||||||||||||||| || ||||| Sbjct: 35885600 cgtcgccgtggccgtggccgtggtggcg 35885573 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 gcgccgtcgccgtggccgtggccctgct 160 ||||||| ||||||||||||| |||||| Sbjct: 18448060 gcgccgtggccgtggccgtggtcctgct 18448087
>ref|NM_001032701.1| Takifugu rubripes ZIP zinc uptake transporter 1 (FrZIP1p), mRNA Length = 2177 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccgtcgccgtggccgtggcc 155 |||||||||||||||||||| Sbjct: 510 ccgtcgccgtggccgtggcc 491
>ref|XM_809293.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511239.30) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccggcagtccggcggcgcct 297 |||||||||||||||||||| Sbjct: 322 ccggcagtccggcggcgcct 303
>ref|XM_813068.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506605.40) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccggcagtccggcggcgcct 297 |||||||||||||||||||| Sbjct: 322 ccggcagtccggcggcgcct 303
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence Length = 222535 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 27778 ttcctcagcctgcaccatcc 27759
>gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complete sequence Length = 99227 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gtggccgtggccctgctggc 163 |||||||||||||||||||| Sbjct: 70097 gtggccgtggccctgctggc 70116
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tggcgcgccgggctgccgcg 131 |||||||||||||||||||| Sbjct: 184722 tggcgcgccgggctgccgcg 184741
>gb|AY341851.1| Oryza sativa (japonica cultivar-group) WRKY10 mRNA, complete cds Length = 2531 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1129 ctggcggcagcggcgtcgtcgtcg 1106
>gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA, complete cds Length = 3152 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1839 ctggcggcagcggcgtcgtcgtcg 1816
>emb|Y07955.1|OSANTHSYN O.sativa mRNA for anthocyanidin synthase Length = 1606 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ctcggccgccgcgcgcaccg 30 |||||||||||||||||||| Sbjct: 291 ctcggccgccgcgcgcaccg 272
>gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 124287 ttcctcagcctgcaccatcc 124306
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ccctgctggcggcagtggcg 173 |||||||||||||||||||| Sbjct: 337180 ccctgctggcggcagtggcg 337161
>gb|AC148314.3| Pan troglodytes BAC clone CH251-527C13 from chromosome 7, complete sequence Length = 172090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gtggccgtggccctgctggc 163 |||||||||||||||||||| Sbjct: 136013 gtggccgtggccctgctggc 136032
>tpg|BK005038.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 35 (WRKY35) gene, complete cds Length = 3290 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1930 ctggcggcagcggcgtcgtcgtcg 1907
>gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, complete sequence Length = 149605 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gtggccgtggccctgctggc 163 |||||||||||||||||||| Sbjct: 3028 gtggccgtggccctgctggc 3009
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 cgtcgccgtggccgtggccctgctggcg 164 ||||||||||||||||||| || ||||| Sbjct: 75525 cgtcgccgtggccgtggccgtggtggcg 75552
>gb|AY529485.1| Takifugu rubripes ZIP zinc uptake transporter 1 mRNA, complete cds Length = 2177 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccgtcgccgtggccgtggcc 155 |||||||||||||||||||| Sbjct: 510 ccgtcgccgtggccgtggcc 491
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188768 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 144681 ttcctcagcctgcaccatcc 144662
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 137 cgtcgccgtggccgtggccctgctggcg 164 ||||||||||||||||||| || ||||| Sbjct: 35975730 cgtcgccgtggccgtggccgtggtggcg 35975703 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 gcgccgtcgccgtggccgtggccctgct 160 ||||||| ||||||||||||| |||||| Sbjct: 18442101 gcgccgtggccgtggccgtggtcctgct 18442128
>gb|AC025259.49| Homo sapiens 12 BAC RP11-1100L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212622 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gtggccgtggccctgctggc 163 |||||||||||||||||||| Sbjct: 113522 gtggccgtggccctgctggc 113503
>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete sequence Length = 90673 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 gcgccgtcgccgtggccgtggccctgct 160 ||||||| ||||||||||||| |||||| Sbjct: 33155 gcgccgtggccgtggccgtggtcctgct 33128
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccgtcgccgtggccgtggcc 155 |||||||||||||||||||| Sbjct: 8803 ccgtcgccgtggccgtggcc 8822
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctcggccgccgcgcgcaccg 30 |||||||||||||||||||| Sbjct: 7989 ctcggccgccgcgcgcaccg 8008
>gb|AC093540.3| Pan troglodytes clone RP43-84M6, complete sequence Length = 171092 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gtggccgtggccctgctggc 163 |||||||||||||||||||| Sbjct: 135793 gtggccgtggccctgctggc 135812
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctcggccgccgcgcgcaccg 30 |||||||||||||||||||| Sbjct: 124517 ctcggccgccgcgcgcaccg 124536
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 cgccgtcgccgtggccgtggccct 157 |||||| ||||||||||||||||| Sbjct: 91913 cgccgtggccgtggccgtggccct 91936
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 cgcgtgcgccgtcgccgtggccgtggcc 155 |||| ||||||||||||| ||||||||| Sbjct: 50215 cgcgcgcgccgtcgccgtcgccgtggcc 50242
>dbj|AK100733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117O12, full insert sequence Length = 1119 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 137 cgtcgccgtggccgtggccctgctggcg 164 ||||||||||||||||||| || ||||| Sbjct: 227 cgtcgccgtggccgtggccgtggtggcg 200
>dbj|AK069710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G03, full insert sequence Length = 1027 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 gcgccgtcgccgtggccgtggccctgct 160 ||||||| ||||||||||||| |||||| Sbjct: 168 gcgccgtggccgtggccgtggtcctgct 195
>dbj|AK061730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C03, full insert sequence Length = 1085 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 gcgccgtcgccgtggccgtggccctgct 160 ||||||| ||||||||||||| |||||| Sbjct: 105 gcgccgtggccgtggccgtggtcctgct 132
>dbj|AK061073.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D05, full insert sequence Length = 1106 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 137 cgtcgccgtggccgtggccctgctggcg 164 ||||||||||||||||||| || ||||| Sbjct: 228 cgtcgccgtggccgtggccgtggtggcg 201
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 112599 ctggcggcagcggcgtcgtcgtcg 112622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,355,299 Number of Sequences: 3902068 Number of extensions: 3355299 Number of successful extensions: 82560 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78852 Number of HSP's gapped (non-prelim): 3695 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
