ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27b07 |
|---|---|
| Clone Library Name | barley_pub |
>FABI_BRANA (P80030) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast| precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) Length = 385 Score = 135 bits (340), Expect = 8e-32 Identities = 79/154 (51%), Positives = 93/154 (60%), Gaps = 8/154 (5%) Frame = +1 Query: 118 SAATGMQMVAARPCIPACQRMLGSKSVVS----AFGRALSTRTGFASCVKTASAGPLISV 285 +AA+ +QM RP I A + V + A+ A + C++ SA P Sbjct: 5 AAASSLQMATTRPSISAASSKARTYVVGANPRNAYKIACTPHLSNLGCLRNDSALPASKK 64 Query: 286 SHKRFAVRAMSQG----AVQGLPIDLGGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVG 453 S F+ +AMS+ A GLPIDL GKRAFIAG+ADDNGYGW EILVG Sbjct: 65 SFS-FSTKAMSESSESKASSGLPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG 123 Query: 454 TWVPALNIFETSLRRGKFDESRKLPDGSLMEITK 555 TWVPALNIFETSLRRGKFD+SR LPDGSLMEI K Sbjct: 124 TWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKK 157
>MGR7_RAT (P35400) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 915 Score = 32.3 bits (72), Expect = 0.93 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = -1 Query: 477 YVQCRHPCTNKNFSTSCSKSLCYCPAITIIISN-----SSNKCSFTSEINGEALDSSLRH 313 Y+Q + N S S + + Y P + III + K SF + + + S L H Sbjct: 819 YIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSH 878 Query: 312 RPDGKP 295 +P +P Sbjct: 879 KPSDRP 884
>MGR7_MOUSE (Q68ED2) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 915 Score = 32.3 bits (72), Expect = 0.93 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = -1 Query: 477 YVQCRHPCTNKNFSTSCSKSLCYCPAITIIISN-----SSNKCSFTSEINGEALDSSLRH 313 Y+Q + N S S + + Y P + III + K SF + + + S L H Sbjct: 819 YIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSH 878 Query: 312 RPDGKP 295 +P +P Sbjct: 879 KPSDRP 884
>MGR7_HUMAN (Q14831) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 915 Score = 32.3 bits (72), Expect = 0.93 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = -1 Query: 477 YVQCRHPCTNKNFSTSCSKSLCYCPAITIIISN-----SSNKCSFTSEINGEALDSSLRH 313 Y+Q + N S S + + Y P + III + K SF + + + S L H Sbjct: 819 YIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSH 878 Query: 312 RPDGKP 295 +P +P Sbjct: 879 KPSDRP 884
>MGR7_PONPY (Q5RDQ8) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 922 Score = 32.3 bits (72), Expect = 0.93 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = -1 Query: 477 YVQCRHPCTNKNFSTSCSKSLCYCPAITIIISN-----SSNKCSFTSEINGEALDSSLRH 313 Y+Q + N S S + + Y P + III + K SF + + + S L H Sbjct: 819 YIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSH 878 Query: 312 RPDGKP 295 +P +P Sbjct: 879 KPSDRP 884
>ASCL2_RAT (P19360) Achaete-scute homolog 2| Length = 260 Score = 31.6 bits (70), Expect = 1.6 Identities = 29/112 (25%), Positives = 43/112 (38%) Frame = -1 Query: 462 HPCTNKNFSTSCSKSLCYCPAITIIISNSSNKCSFTSEINGEALDSSLRHRPDGKPLVAY 283 HP ++FS K + PA+ + + +G A + R RP L+ Sbjct: 43 HPVPREHFSCGAPKPVAGAPALNASLMDGGALPRLVPTSSGVAGACTARRRPPSPELLRC 102 Query: 282 RNERSC*RSLNTACKASSGAECPSECRNHRFRPKHSLASWDARACRHHLHTG 127 R RS T +SS A RN R R + L + +A R H+ G Sbjct: 103 SRRR---RSGATEASSSSAAVAR---RNERERNRVKLVNLGFQALRQHVPHG 148
>ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB-16)| Length = 453 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -1 Query: 258 SLNTACKASSGAECPSECRNHRFRPKHSL-ASWDARACRHHLHT 130 +LN AC +GAE P CR H+ + L A DARA HT Sbjct: 246 ALNAAC---AGAEGPGSCRRHQAAARRLLEAGADARAAGRKRHT 286
>PANC_SHEON (Q8EIH0) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 281 Score = 31.2 bits (69), Expect = 2.1 Identities = 18/57 (31%), Positives = 33/57 (57%) Frame = +1 Query: 178 MLGSKSVVSAFGRALSTRTGFASCVKTASAGPLISVSHKRFAVRAMSQGAVQGLPID 348 ++G ++ A G A+S+R G+ + + A+A L + A+ AM+QG QG+ I+ Sbjct: 172 IIGIDTIREASGLAMSSRNGYLTAQEKAAAPAL------KKAIDAMAQGIKQGISIE 222
>CYAA_BORPE (P15318) Bifunctional hemolysin-adenylate cyclase precursor| (Cyclolysin) (ACT) (AC-HLY) [Contains: Calmodulin-sensitive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase); Hemolysin] Length = 1706 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 97 ESTTMGASAATGMQMVAARPCIPACQRMLGSKSVVSAFGRALSTRT 234 E GASA G + + + A QR++ + ++++ FGRA ST T Sbjct: 448 EPGVSGASAHWGQRALQGAQAVAAAQRLVHAIALMTQFGRAGSTNT 493
>CYAA_BORBR (Q57506) Bifunctional hemolysin-adenylate cyclase precursor| (Cyclolysin) (ACT) (AC-HLY) [Contains: Calmodulin-sensitive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase); Hemolysin] Length = 1706 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 97 ESTTMGASAATGMQMVAARPCIPACQRMLGSKSVVSAFGRALSTRT 234 E GASA G + + + A QR++ + ++++ FGRA ST T Sbjct: 448 EPGVSGASAHWGQRALQGAQAVAAAQRLVHAIALMTQFGRAGSTNT 493
>KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-associated| protein 10.10) (High sulfur keratin-associated protein 10.10) (Keratin-associated protein 18-10) (Keratin-associated protein 18.10) Length = 251 Score = 29.6 bits (65), Expect = 6.0 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Frame = -1 Query: 498 TSQACLEYVQCR------HPCTNKNFSTSCSKSLCYCPAITIIISNSSNKCSFTSEINGE 337 +S +C + C+ PC CSKS+CY P + S +S C S Sbjct: 122 SSPSCCQQSSCQPTCCTSSPCQQACCVPVCSKSVCYVP----VCSGASTSCCQQSSCQPA 177 Query: 336 ALDSSLRHRPDGKPLVAYRNERSC*RSLNTACKASSGAECPSECR 202 +S L+ + +S +C AS+ + PS CR Sbjct: 178 CCTASCCRPSSSVSLLCHPVCKSTCCVPVPSCGASASSCQPSCCR 222
>FABI_SYNY3 (P73016) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 258 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/51 (29%), Positives = 21/51 (41%) Frame = +1 Query: 343 IDLGGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVGTWVPALNIFETSLR 495 +DL GK AF+ G+A++ W EI V FE +R Sbjct: 2 LDLSGKHAFVTGIANNRSIAWGIAQQLHQAGAEIGVSYLPDEKGRFEKKVR 52
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +3 Query: 171 PANAW-VEICGFCIRKGTQHQNWLCKLC*DCVSRTAH 278 PA AW ICG C+R+ H W+ CV + H Sbjct: 269 PARAWRCRICGICVRRMDHHCVWIN----SCVGESNH 301 Score = 29.3 bits (64), Expect = 7.9 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 2/87 (2%) Frame = +3 Query: 30 SSSDLQPPSRXXXXXXXXFPFPRVDYDGCICSYRYADG--GGTPLHPSLPANAWVEICGF 203 SSS L+ SR FP D G + + D G + + P A + C Sbjct: 206 SSSQLECLSRKGQEKAKGFP--GADMSGSLNNRTTKDDPKGSSKMPAGSPTKAKEDWCAK 263 Query: 204 CIRKGTQHQNWLCKLC*DCVSRTAHFC 284 C + + W C++C CV R H C Sbjct: 264 C-QLVRPARAWRCRICGICVRRMDHHC 289
>ZDH23_RAT (Q76IC6) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) (NNOS-interacting DHHC domain-containing protein with dendritic mRNA) Length = 429 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +3 Query: 171 PANAW-VEICGFCIRKGTQHQNWLCKLC*DCVSRTAH 278 PA AW ICG C+R+ H W+ CV + H Sbjct: 263 PARAWHCRICGICVRRMDHHCVWIN----SCVGESNH 295
>ZDH23_MOUSE (Q5Y5T3) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) (DHHC-containing protein 11) Length = 425 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +3 Query: 171 PANAW-VEICGFCIRKGTQHQNWLCKLC*DCVSRTAH 278 PA AW ICG C+R+ H W+ CV + H Sbjct: 259 PARAWHCRICGICVRRMDHHCVWIN----SCVGESNH 291
>MT_GOBCO (Q800D3) Metallothionein (MT)| Length = 60 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -1 Query: 468 CRHPCTNKNFS-TSCSKSLCYCPAITIIISNSSNKCSFTSEINGEALDSS 322 C CT KN S TSC KS C C + +KC+ G+ D+S Sbjct: 14 CGGSCTCKNCSCTSCKKSCCSC------CPSGCSKCASGCVCKGKTCDTS 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,288,493 Number of Sequences: 219361 Number of extensions: 1430716 Number of successful extensions: 4702 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4526 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4701 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
