Clone Name	bart27a09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY736125.1| Triticum aestivum histone deacetylase mRNA, compl...	965	0.0
2	ref|XM_481792.1| Oryza sativa (japonica cultivar-group), mRNA	553	e-154
3	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	553	e-154
4	dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic D...	553	e-154
5	dbj|AK111861.1| Oryza sativa (japonica cultivar-group) cDNA clon...	553	e-154
6	gb|AY105891.1| Zea mays PCO107327 mRNA sequence	466	e-128
7	gb|AF045473.1|AF045473 Zea mays histone deacetylase (hd1b) mRNA,...	440	e-120
8	gb|AF440226.1| Zea mays histone deacetylase (HDA108) mRNA, parti...	424	e-115
9	gb|AF513382.1| Oryza sativa (japonica cultivar-group) histone de...	139	1e-29
10	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
11	gb|AF332875.1|AF332875 Oryza sativa histone deacetylase HD1 mRNA...	139	1e-29
12	dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
13	dbj|AK068682.1| Oryza sativa (japonica cultivar-group) cDNA clon...	139	1e-29
14	dbj|AK068051.1| Oryza sativa (japonica cultivar-group) cDNA clon...	139	1e-29
15	ref|XM_464642.1| Oryza sativa (japonica cultivar-group), mRNA	109	1e-20
16	ref|XM_464641.1| Oryza sativa (japonica cultivar-group), mRNA	109	1e-20
17	gb|AF513383.1| Oryza sativa (japonica cultivar-group) histone de...	109	1e-20
18	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
19	dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
20	dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
21	dbj|AK103097.1| Oryza sativa (japonica cultivar-group) cDNA clon...	109	1e-20
22	gb|BT009381.1| Triticum aestivum clone wlm96.pk032.f11:fis, full...	92	2e-15
23	ref|NM_125705.2| Arabidopsis thaliana HDA6 (HISTONE DEACETYLASE ...	90	9e-15
24	gb|AY142660.1| Arabidopsis thaliana putative histone deacetylase...	90	9e-15
25	gb|AY072201.1| Arabidopsis thaliana putative histone deacetylase...	90	9e-15
26	emb|BX834033.1|CNS0A20D Arabidopsis thaliana Full-length cDNA Co...	90	9e-15
27	emb|BX830147.1|CNS0A1C8 Arabidopsis thaliana Full-length cDNA Co...	90	9e-15
28	emb|BX829582.1|CNS0A1JB Arabidopsis thaliana Full-length cDNA Co...	90	9e-15
29	emb|BX829580.1|CNS0A1IE Arabidopsis thaliana Full-length cDNA Co...	90	9e-15
30	emb|BX831490.1|CNS0A0YZ Arabidopsis thaliana Full-length cDNA Co...	90	9e-15
31	gb|AF195548.1|AF195548 Arabidopsis thaliana putative histone dea...	90	9e-15
32	gb|AY088314.1| Arabidopsis thaliana clone 5511 mRNA, complete se...	90	9e-15
33	dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	90	9e-15
34	ref|XM_464639.1| Oryza sativa (japonica cultivar-group), mRNA	86	1e-13
35	ref|XM_464638.1| Oryza sativa (japonica cultivar-group), mRNA	86	1e-13
36	gb|AF513384.1| Oryza sativa (japonica cultivar-group) histone de...	86	1e-13
37	dbj|AK071228.1| Oryza sativa (japonica cultivar-group) cDNA clon...	86	1e-13
38	gb|AY107370.1| Zea mays PCO095363 mRNA sequence	86	1e-13
39	gb|AF384032.1| Zea mays histone deacetylase HDA101 (hda101) mRNA...	84	5e-13
40	gb|AY112571.1| Zea mays CL997_1 mRNA sequence	84	5e-13
41	gb|AF035815.1|AF035815 Zea mays putative histone deacetylase RPD...	84	5e-13
42	dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone...	84	5e-13
43	ref|XM_464643.1| Oryza sativa (japonica cultivar-group), mRNA	66	1e-07
44	gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome...	66	1e-07
45	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	66	1e-07
46	dbj|AK064000.1| Oryza sativa (japonica cultivar-group) cDNA clon...	66	1e-07
47	gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and f...	62	2e-06
48	gb|AF411956.1| Takifugu rubripes lck gene locus, partial sequence	62	2e-06
49	dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic D...	60	8e-06
50	ref|NM_122951.1| Arabidopsis thaliana histone deacetylase AT5G35...	56	1e-04
51	gb|DQ447001.1| Arabidopsis thaliana clone pENTR221-At5g35600 his...	56	1e-04
52	gb|AF510166.1| Arabidopsis thaliana HDA7 mRNA, complete cds	56	1e-04
53	dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	56	1e-04
54	ref|XM_853060.1| PREDICTED: Canis familiaris similar to histone ...	54	5e-04
55	ref|XM_853020.1| PREDICTED: Canis familiaris similar to histone ...	54	5e-04
56	ref|XM_535219.2| PREDICTED: Canis familiaris similar to histone ...	54	5e-04
57	ref|XM_852894.1| PREDICTED: Canis familiaris similar to histone ...	54	5e-04
58	ref|NM_119974.2| Arabidopsis thaliana HD1; histone deacetylase A...	50	0.008
59	gb|BT008873.1| Arabidopsis thaliana At4g38130 mRNA, complete cds	50	0.008
60	emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ...	50	0.008
61	emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, B...	50	0.008
62	gb|AY093153.1| Arabidopsis thaliana histone deacetylase (At4g381...	50	0.008
63	gb|AF352394.1| Physarum polycephalum putative histone deacetylas...	50	0.008
64	emb|BX827687.1|CNS0A3TR Arabidopsis thaliana Full-length cDNA Co...	50	0.008
65	emb|BX827416.1|CNS0A2E5 Arabidopsis thaliana Full-length cDNA Co...	50	0.008
66	gb|AF195547.1|AF195547 Arabidopsis thaliana putative histone dea...	50	0.008
67	gb|AF014824.1|AF014824 Arabidopsis thaliana histone deacetylase ...	50	0.008
68	ref|XM_744381.1| Aspergillus fumigatus Af293 histone deacetylase...	48	0.030
69	ref|XM_364906.1| Magnaporthe grisea 70-15 predicted protein (MG0...	46	0.12
70	gb|BC000614.1| Homo sapiens histone deacetylase 3, mRNA (cDNA cl...	46	0.12
71	ref|XM_881752.1| PREDICTED: Bos taurus histone deacetylase 3, tr...	46	0.12
72	ref|XM_881738.1| PREDICTED: Bos taurus histone deacetylase 3, tr...	46	0.12
73	ref|XM_881724.1| PREDICTED: Bos taurus histone deacetylase 3, tr...	46	0.12
74	ref|XM_868478.1| PREDICTED: Bos taurus histone deacetylase 3, tr...	46	0.12
75	ref|XM_881669.1| PREDICTED: Bos taurus histone deacetylase 3, tr...	46	0.12
76	gb|AY429538.1| Homo sapiens HDAC3v_2 mRNA sequence; alternativel...	46	0.12
77	ref|NM_003883.2| Homo sapiens histone deacetylase 3 (HDAC3), mRNA	46	0.12
78	emb|CR858777.1| Pongo pygmaeus mRNA; cDNA DKFZp469I1039 (from cl...	46	0.12
79	emb|CR615606.1| full-length cDNA clone CS0DK009YM08 of HeLa cell...	46	0.12
80	emb|CR624340.1| full-length cDNA clone CS0DF022YD13 of Fetal bra...	46	0.12
81	emb|CR623951.1| full-length cDNA clone CS0DI021YC13 of Placenta ...	46	0.12
82	emb|CR618922.1| full-length cDNA clone CS0DD007YP11 of Neuroblas...	46	0.12
83	emb|CR592966.1| full-length cDNA clone CS0DC027YF17 of Neuroblas...	46	0.12
84	gb|BC111247.1| Bos taurus cDNA clone IMAGE:8065154, containing f...	46	0.12
85	gb|AY889365.1| Synthetic construct Homo sapiens clone FLH117269....	46	0.12
86	gb|AF039703.1|AF039703 Homo sapiens histone deacetylase 3 (HDAC3...	46	0.12
87	gb|U66914.1|HSU66914 Homo sapiens histone deacetylase 3 (HDAC3) ...	46	0.12
88	gb|U75697.1|HSU75697 Human transcription regulator RPD3-2B mRNA,...	46	0.12
89	gb|U75696.1|HSU75696 Human transcription regulator RPD3-2A (hRPD...	46	0.12
90	gb|AF005482.1|AF005482 Homo sapiens histone deacetylase-3C mRNA,...	46	0.12
91	gb|AY533375.1| Rhizobium lupini MotA (motA), FliM (fliM), FliN (...	44	0.47
92	ref|XM_959358.1| Neurospora crassa OR74A hypothetical protein (N...	44	0.47
93	ref|XM_329982.1| Neurospora crassa OR74A hypothetical protein (N...	44	0.47
94	emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom...	44	0.47
95	gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence	42	1.9
96	gb|AC131109.3| Mus musculus BAC clone RP23-362M7 from chromosome...	42	1.9
97	gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, comple...	42	1.9
98	emb|CR731594.2|CNS0GRFZ Tetraodon nigroviridis full-length cDNA	42	1.9
99	emb|CR719021.2|CNS0GHQR Tetraodon nigroviridis full-length cDNA	42	1.9
100	emb|BX053459.1|CNS09DEV Single read from an extremity of a full-...	42	1.9
101	emb|BX029656.1|CNS08V1O Single read from an extremity of a full-...	42	1.9
102	gb|AE005870.1| Caulobacter crescentus CB15 section 196 of 359 of...	42	1.9
103	dbj|AK155586.1| Mus musculus B6-derived CD11 +ve dendritic cells...	42	1.9
104	gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	42	1.9
105	ref|XM_322018.2| Anopheles gambiae str. PEST ENSANGP00000012089 ...	42	1.9
106	ref|NM_211073.1| Eremothecium gossypii AFR172Cp (AFR172C), mRNA	42	1.9
107	gb|AC171813.2| Mus musculus BAC clone RP23-75G11 from chromosome...	42	1.9
108	gb|DQ004745.1| Toxoplasma gondii histone deacetylase 3 mRNA, com...	42	1.9
109	ref|XM_478670.1| Oryza sativa (japonica cultivar-group), mRNA	40	7.3
110	gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c...	40	7.3
111	ref|XM_422269.1| PREDICTED: Gallus gallus tyrosine kinase ABL (C...	40	7.3
112	gb|BC064650.1| Danio rerio histone deacetylase 1, mRNA (cDNA clo...	40	7.3
113	ref|XM_587001.2| PREDICTED: Bos taurus similar to adenylate cycl...	40	7.3
114	ref|XM_869639.1| PREDICTED: Bos taurus similar to adenylate cycl...	40	7.3
115	gb|BC067168.1| Danio rerio histone deacetylase 1, mRNA (cDNA clo...	40	7.3
116	gb|AC124133.13| Mus musculus chromosome 15, clone RP23-218L23, c...	40	7.3
117	gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, com...	40	7.3
118	ref|XM_843063.1| Leishmania major strain Friedlin FtsJ cell divi...	40	7.3
119	gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, comple...	40	7.3
120	ref|XM_504286.1| Yarrowia lipolytica CLIB122, YALI0E22935g predi...	40	7.3
121	ref|XM_964326.1| PREDICTED: Tribolium castaneum similar to CG212...	40	7.3
122	emb|CR933645.1| Homo sapiens mRNA; cDNA DKFZp781I1455 (from clon...	40	7.3
123	gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, comp...	40	7.3
124	ref|NM_173236.1| Danio rerio histone deacetylase 1 (hdac1), mRNA	40	7.3
125	emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ...	40	7.3
126	emb|CR936664.1| Homo sapiens mRNA; cDNA DKFZp781C1754 (from clon...	40	7.3
127	gb|AC163662.3| Mus musculus BAC clone RP23-299N4 from chromosome...	40	7.3
128	gb|BC085375.1| Danio rerio histone deacetylase 1, mRNA (cDNA clo...	40	7.3
129	dbj|AB029025.2| Homo sapiens mRNA for KIAA1102 protein, partial cds	40	7.3
130	gb|AF506201.1| Danio rerio histone deaceytlase 1 (hdac1) mRNA, c...	40	7.3
131	gb|BC108088.1| Bos taurus histone deacetylase 1, mRNA (cDNA clon...	40	7.3
132	ref|XM_683129.1| PREDICTED: Danio rerio similar to histone deace...	40	7.3
133	gb|AF044169.1|AF044169 Gallus gallus erythrocyte histone deacety...	40	7.3
134	gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like prot...	40	7.3
135	gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like prot...	40	7.3
136	dbj|AK087725.1| Mus musculus 2 days pregnant adult female ovary ...	40	7.3
137	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
138	gb|AC095043.3| Homo sapiens BAC clone RP11-124A7 from 4, complet...	40	7.3
139	emb|BX933239.1| Gallus gallus finished cDNA, clone ChEST517f10	40	7.3
140	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	7.3
141	ref|XM_342149.2| PREDICTED: Rattus norvegicus histone deacetylas...	40	7.3
142	dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
143	dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
144	dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
145	gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, comple...	40	7.3
146	gb|AF039751.1|AF039751 Gallus gallus histone deacetylase-1 mRNA,...	40	7.3
147	gb|BC053639.1| Homo sapiens hypothetical protein, mRNA (cDNA clo...	40	7.3
148	gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...	40	7.3
149	gb|AC140281.5| Mus musculus BAC clone RP24-329M4 from 16, comple...	40	7.3
150	gb|AC130844.3| Mus musculus BAC clone RP24-529I3 from 16, comple...	40	7.3
151	gb|AF043328.1|AF043328 Gallus gallus histone deacetylase 1 (HDAC...	40	7.3
152	emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ...	40	7.3
153	ref|NM_014988.1| Homo sapiens hypothetical protein (DKFZP686A012...	40	7.3
154	dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...	40	7.3
155	ref|NM_001037444.1| Bos taurus histone deacetylase 1 (HDAC1), mRNA	40	7.3
156	emb|X60380.1|GGTK1 G.gallus tk1 mRNA for protein tyrosine kinase...	40	7.3
157	emb|AL591952.9| Mouse DNA sequence from clone RP23-25N17 on chro...	40	7.3
158	gb|J03579.1|CHKTCKL Chicken tyrosine kinase protooncogene (c-tkl...	40	7.3

---

>gb|AY736125.1| Triticum aestivum histone deacetylase mRNA, complete cds
          Length = 1417

 Score =  965 bits (487), Expect = 0.0
 Identities = 511/519 (98%)
 Strand = Plus / Plus

                                                                       
Query: 16  aagagagaagaaattccccgaaatggcggcgtccggcgagggagcgtcgctgccgtctcc 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  aagagagaagaaattccccgaaatggcggcgtccggcgagggagcgtcgctgccgtctcc 73

                                                                       
Query: 76  ggcaggcggcgaggacggccgccgccgtcgtgtgagctacttctacgagcccacgatcgg 135
           |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  ggcaggtggcgaggacagccgccgccgtcgtgtgagctacttctacgagcccacgatcgg 133

                                                                       
Query: 136 cgactactactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactc 195
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cgactactactacgggcagggccacccgatgaagccccaccgcatccgcatggcgcactc 193

                                                                       
Query: 196 gctggttatccactatggtctgcaccgcctgctcgagctctcgcgccccttccctgcctc 255
           ||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 194 gctagttatccactatggtctgcaccgcctgctcgagctttcacgccccttccctgcctc 253

                                                                       
Query: 256 ggaagccgacatcagccgcttccactccgatgaatatgtctccttccttgcctccgcgac 315
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 254 ggaagccgacatcagccgcttccactccgacgaatatgtctccttccttgcctccgcgac 313

                                                                       
Query: 316 cggcaacccgaccatcctcgacccccgcgccgtcaagcgcttcaacgtcggggaggactg 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cggcaacccgaccatcctcgacccccgcgccgtcaagcgcttcaacgtcggggaggactg 373

                                                                       
Query: 376 ccccgtctttgacggactcttccccttctgccaggcctccgccggtggcagcatcggcgc 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccccgtctttgacggactcttccccttctgccaggcctccgccggtggcagcatcggcgc 433

                                                                       
Query: 436 cgccgtcaagctcaaccgtggtgacgccgacatcaccgtgaactgggccggcgggctcca 495
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cgccgtcaagctcaaccgtggcgacgccgacatcaccgtgaactgggccggcgggctcca 493

                                                  
Query: 496 ccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccacgccaagaagggcgaggcctctgggttctgctatgt 532

---

>ref|XM_481792.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1857

 Score =  553 bits (279), Expect = e-154
 Identities = 453/511 (88%)
 Strand = Plus / Plus

                                                                       
Query: 21  agaagaaattccccgaaatggcggcgtccggcgagggagcgtcgctgccgtctccggcag 80
           ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||  |||| |
Sbjct: 56  agaagaaatcctccgaaatggcggcgtccggcgagggggcgtcgctggcgtcggcggcgg 115

                                                                       
Query: 81  gcggcgaggacggccgccgccgtcgtgtgagctacttctacgagcccacgatcggcgact 140
           | || |||||||| || || || || ||||||||||||||||||||  ||||||| ||||
Sbjct: 116 gaggggaggacgggcggcggcggcgggtgagctacttctacgagccgtcgatcggggact 175

                                                                       
Query: 141 actactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgctgg 200
           |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 176 actactacgggcaggggcacccgatgaagccccatcgcatccgcatggcgcactcgctgg 235

                                                                       
Query: 201 ttatccactatggtctgcaccgcctgctcgagctctcgcgccccttccctgcctcggaag 260
           |  ||||||| || || |||||||| ||||||||||| ||||||| ||| ||||| || |
Sbjct: 236 tggtccactacggcctccaccgcctcctcgagctctcccgcccctacccggcctccgacg 295

                                                                       
Query: 261 ccgacatcagccgcttccactccgatgaatatgtctccttccttgcctccgcgaccggca 320
           |||||||| |||||||||||||||| || || ||| ||||||| |||||||| ||||| |
Sbjct: 296 ccgacatccgccgcttccactccgacgactacgtcgccttcctcgcctccgccaccggga 355

                                                                       
Query: 321 acccgaccatcctcgacccccgcgccgtcaagcgcttcaacgtcggggaggactgccccg 380
           ||||  || | |||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 356 accccgccctgctcgacgcccgcgccgtcaagcgcttcaacgtcggcgaggactgcccgg 415

                                                                       
Query: 381 tctttgacggactcttccccttctgccaggcctccgccggtggcagcatcggcgccgccg 440
           |||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 416 tcttcgacggcctcttccccttctgccaggcctccgcggggggcagcatcggcgccgccg 475

                                                                       
Query: 441 tcaagctcaaccgtggtgacgccgacatcaccgtgaactgggccggcgggctccaccacg 500
           ||||||||||||| || ||||||||||||||||| |||||||| || || ||||||||||
Sbjct: 476 tcaagctcaaccgcggcgacgccgacatcaccgtcaactgggcggggggcctccaccacg 535

                                          
Query: 501 ccaagaagggcgaggcctctgggttctgcta 531
           ||||||||||||||||||| || ||||||||
Sbjct: 536 ccaagaagggcgaggcctccggcttctgcta 566

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  553 bits (279), Expect = e-154
 Identities = 453/511 (88%)
 Strand = Plus / Plus

                                                                            
Query: 21       agaagaaattccccgaaatggcggcgtccggcgagggagcgtcgctgccgtctccggcag 80
                ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||  |||| |
Sbjct: 15546952 agaagaaatcctccgaaatggcggcgtccggcgagggggcgtcgctggcgtcggcggcgg 15547011

                                                                            
Query: 81       gcggcgaggacggccgccgccgtcgtgtgagctacttctacgagcccacgatcggcgact 140
                | || |||||||| || || || || ||||||||||||||||||||  ||||||| ||||
Sbjct: 15547012 gaggggaggacgggcggcggcggcgggtgagctacttctacgagccgtcgatcggggact 15547071

                                                                            
Query: 141      actactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgctgg 200
                |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 15547072 actactacgggcaggggcacccgatgaagccccatcgcatccgcatggcgcactcgctgg 15547131

                                                                            
Query: 201      ttatccactatggtctgcaccgcctgctcgagctctcgcgccccttccctgcctcggaag 260
                |  ||||||| || || |||||||| ||||||||||| ||||||| ||| ||||| || |
Sbjct: 15547132 tggtccactacggcctccaccgcctcctcgagctctcccgcccctacccggcctccgacg 15547191

                                                                            
Query: 261      ccgacatcagccgcttccactccgatgaatatgtctccttccttgcctccgcgaccggca 320
                |||||||| |||||||||||||||| || || ||| ||||||| |||||||| ||||| |
Sbjct: 15547192 ccgacatccgccgcttccactccgacgactacgtcgccttcctcgcctccgccaccggga 15547251

                                                                            
Query: 321      acccgaccatcctcgacccccgcgccgtcaagcgcttcaacgtcggggaggactgccccg 380
                ||||  || | |||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 15547252 accccgccctgctcgacgcccgcgccgtcaagcgcttcaacgtcggcgaggactgcccgg 15547311

                                                                            
Query: 381      tctttgacggactcttccccttctgccaggcctccgccggtggcagcatcggcgccgccg 440
                |||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 15547312 tcttcgacggcctcttccccttctgccaggcctccgcggggggcagcatcggcgccgccg 15547371

                                                                            
Query: 441      tcaagctcaaccgtggtgacgccgacatcaccgtgaactgggccggcgggctccaccacg 500
                ||||||||||||| || ||||||||||||||||| |||||||| || || ||||||||||
Sbjct: 15547372 tcaagctcaaccgcggcgacgccgacatcaccgtcaactgggcggggggcctccaccacg 15547431

                                               
Query: 501      ccaagaagggcgaggcctctgggttctgcta 531
                ||||||||||||||||||| || ||||||||
Sbjct: 15547432 ccaagaagggcgaggcctccggcttctgcta 15547462

---

>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_B10
          Length = 148508

 Score =  553 bits (279), Expect = e-154
 Identities = 453/511 (88%)
 Strand = Plus / Plus

                                                                         
Query: 21    agaagaaattccccgaaatggcggcgtccggcgagggagcgtcgctgccgtctccggcag 80
             ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||  |||| |
Sbjct: 94710 agaagaaatcctccgaaatggcggcgtccggcgagggggcgtcgctggcgtcggcggcgg 94769

                                                                         
Query: 81    gcggcgaggacggccgccgccgtcgtgtgagctacttctacgagcccacgatcggcgact 140
             | || |||||||| || || || || ||||||||||||||||||||  ||||||| ||||
Sbjct: 94770 gaggggaggacgggcggcggcggcgggtgagctacttctacgagccgtcgatcggggact 94829

                                                                         
Query: 141   actactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgctgg 200
             |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 94830 actactacgggcaggggcacccgatgaagccccatcgcatccgcatggcgcactcgctgg 94889

                                                                         
Query: 201   ttatccactatggtctgcaccgcctgctcgagctctcgcgccccttccctgcctcggaag 260
             |  ||||||| || || |||||||| ||||||||||| ||||||| ||| ||||| || |
Sbjct: 94890 tggtccactacggcctccaccgcctcctcgagctctcccgcccctacccggcctccgacg 94949

                                                                         
Query: 261   ccgacatcagccgcttccactccgatgaatatgtctccttccttgcctccgcgaccggca 320
             |||||||| |||||||||||||||| || || ||| ||||||| |||||||| ||||| |
Sbjct: 94950 ccgacatccgccgcttccactccgacgactacgtcgccttcctcgcctccgccaccggga 95009

                                                                         
Query: 321   acccgaccatcctcgacccccgcgccgtcaagcgcttcaacgtcggggaggactgccccg 380
             ||||  || | |||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 95010 accccgccctgctcgacgcccgcgccgtcaagcgcttcaacgtcggcgaggactgcccgg 95069

                                                                         
Query: 381   tctttgacggactcttccccttctgccaggcctccgccggtggcagcatcggcgccgccg 440
             |||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 95070 tcttcgacggcctcttccccttctgccaggcctccgcggggggcagcatcggcgccgccg 95129

                                                                         
Query: 441   tcaagctcaaccgtggtgacgccgacatcaccgtgaactgggccggcgggctccaccacg 500
             ||||||||||||| || ||||||||||||||||| |||||||| || || ||||||||||
Sbjct: 95130 tcaagctcaaccgcggcgacgccgacatcaccgtcaactgggcggggggcctccaccacg 95189

                                            
Query: 501   ccaagaagggcgaggcctctgggttctgcta 531
             ||||||||||||||||||| || ||||||||
Sbjct: 95190 ccaagaagggcgaggcctccggcttctgcta 95220

---

>dbj|AK111861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027M14, full
           insert sequence
          Length = 1857

 Score =  553 bits (279), Expect = e-154
 Identities = 453/511 (88%)
 Strand = Plus / Plus

                                                                       
Query: 21  agaagaaattccccgaaatggcggcgtccggcgagggagcgtcgctgccgtctccggcag 80
           ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||  |||| |
Sbjct: 56  agaagaaatcctccgaaatggcggcgtccggcgagggggcgtcgctggcgtcggcggcgg 115

                                                                       
Query: 81  gcggcgaggacggccgccgccgtcgtgtgagctacttctacgagcccacgatcggcgact 140
           | || |||||||| || || || || ||||||||||||||||||||  ||||||| ||||
Sbjct: 116 gaggggaggacgggcggcggcggcgggtgagctacttctacgagccgtcgatcggggact 175

                                                                       
Query: 141 actactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgctgg 200
           |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 176 actactacgggcaggggcacccgatgaagccccatcgcatccgcatggcgcactcgctgg 235

                                                                       
Query: 201 ttatccactatggtctgcaccgcctgctcgagctctcgcgccccttccctgcctcggaag 260
           |  ||||||| || || |||||||| ||||||||||| ||||||| ||| ||||| || |
Sbjct: 236 tggtccactacggcctccaccgcctcctcgagctctcccgcccctacccggcctccgacg 295

                                                                       
Query: 261 ccgacatcagccgcttccactccgatgaatatgtctccttccttgcctccgcgaccggca 320
           |||||||| |||||||||||||||| || || ||| ||||||| |||||||| ||||| |
Sbjct: 296 ccgacatccgccgcttccactccgacgactacgtcgccttcctcgcctccgccaccggga 355

                                                                       
Query: 321 acccgaccatcctcgacccccgcgccgtcaagcgcttcaacgtcggggaggactgccccg 380
           ||||  || | |||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 356 accccgccctgctcgacgcccgcgccgtcaagcgcttcaacgtcggcgaggactgcccgg 415

                                                                       
Query: 381 tctttgacggactcttccccttctgccaggcctccgccggtggcagcatcggcgccgccg 440
           |||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 416 tcttcgacggcctcttccccttctgccaggcctccgcggggggcagcatcggcgccgccg 475

                                                                       
Query: 441 tcaagctcaaccgtggtgacgccgacatcaccgtgaactgggccggcgggctccaccacg 500
           ||||||||||||| || ||||||||||||||||| |||||||| || || ||||||||||
Sbjct: 476 tcaagctcaaccgcggcgacgccgacatcaccgtcaactgggcggggggcctccaccacg 535

                                          
Query: 501 ccaagaagggcgaggcctctgggttctgcta 531
           ||||||||||||||||||| || ||||||||
Sbjct: 536 ccaagaagggcgaggcctccggcttctgcta 566

---

>gb|AY105891.1| Zea mays PCO107327 mRNA sequence
          Length = 1829

 Score =  466 bits (235), Expect = e-128
 Identities = 430/495 (86%)
 Strand = Plus / Plus

                                                                       
Query: 37  aatggcggcgtccggcgagggagcgtcgctgccgtctccggcaggcggcgaggacggccg 96
           ||||||||| || || ||||| |||||||||||||||||||| ||||| ||||| |  | 
Sbjct: 31  aatggcggcttctggtgagggcgcgtcgctgccgtctccggcgggcggggaggatgcgca 90

                                                                       
Query: 97  ccgccgtcgtgtgagctacttctacgagcccacgatcggcgactactactacaggcaggg 156
           |||||| || || ||||| |||||||||||  ||||||| |||||||||||| |||| ||
Sbjct: 91  ccgccgccgcgtcagctatttctacgagccgtcgatcggagactactactacgggcaagg 150

                                                                       
Query: 157 ccacccgatgaagccccaccgcatccgcatggcgcactcgctggttatccactatggtct 216
            |||||||||||||||||||||||||| |||||||||||||||||  ||||||| || ||
Sbjct: 151 tcacccgatgaagccccaccgcatccgaatggcgcactcgctggtggtccactacggcct 210

                                                                       
Query: 217 gcaccgcctgctcgagctctcgcgccccttccctgcctcggaagccgacatcagccgctt 276
            |||||||| ||||||||||| ||||||| ||| ||||| || ||||||||| |||||||
Sbjct: 211 ccaccgcctcctcgagctctcccgcccctacccggcctctgaggccgacatccgccgctt 270

                                                                       
Query: 277 ccactccgatgaatatgtctccttccttgcctccgcgaccggcaacccgaccatcctcga 336
           ||||||||| || || ||| | ||||| || ||||| ||||| ||||||    |||||||
Sbjct: 271 ccactccgacgactacgtcgctttcctcgcgtccgccaccggaaacccgggtgtcctcga 330

                                                                       
Query: 337 cccccgcgccgtcaagcgcttcaacgtcggggaggactgccccgtctttgacggactctt 396
           ||| |||||| | |||||||| |||||||| |||||||||||||| || ||||| |||||
Sbjct: 331 cccgcgcgccattaagcgctttaacgtcggtgaggactgccccgtgttcgacggtctctt 390

                                                                       
Query: 397 ccccttctgccaggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtgg 456
           ||||||||||||||||||||| || || ||||||||||||||||||||||| ||||| ||
Sbjct: 391 ccccttctgccaggcctccgctgggggaagcatcggcgccgccgtcaagcttaaccgcgg 450

                                                                       
Query: 457 tgacgccgacatcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggc 516
            ||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||
Sbjct: 451 ggacgccgacatcaccgtcaactgggcgggcggcctccaccacgccaagaagagcgaggc 510

                          
Query: 517 ctctgggttctgcta 531
           ||| |||||||||||
Sbjct: 511 ctccgggttctgcta 525

---

>gb|AF045473.1|AF045473 Zea mays histone deacetylase (hd1b) mRNA, complete cds
          Length = 1742

 Score =  440 bits (222), Expect = e-120
 Identities = 426/494 (86%)
 Strand = Plus / Plus

                                                                       
Query: 38  atggcggcgtccggcgagggagcgtcgctgccgtctccggcaggcggcgaggacggccgc 97
           |||||||| || || ||||| | |||||||||||||||||| ||||| ||||| |  | |
Sbjct: 1   atggcggcttctggtgagggcgtgtcgctgccgtctccggcgggcggggaggatgcgcac 60

                                                                       
Query: 98  cgccgtcgtgtgagctacttctacgagcccacgatcggcgactactactacaggcagggc 157
           ||||| || || ||||| |||||||||||  ||||||| |||||||||||| |||| || 
Sbjct: 61  cgccgccgcgtcagctatttctacgagccgtcgatcggagactactactacgggcaaggt 120

                                                                       
Query: 158 cacccgatgaagccccaccgcatccgcatggcgcactcgctggttatccactatggtctg 217
           |||||||||||||||||||||||||| |||||||| ||||||||  ||||||| || || 
Sbjct: 121 cacccgatgaagccccaccgcatccgaatggcgcattcgctggtggtccactacggcctc 180

                                                                       
Query: 218 caccgcctgctcgagctctcgcgccccttccctgcctcggaagccgacatcagccgcttc 277
           |||||||| ||||||||||| ||||| | ||| ||||| || ||||||||| ||||||||
Sbjct: 181 caccgcctcctcgagctctcccgcccgtacccggcctctgaggccgacatccgccgcttc 240

                                                                       
Query: 278 cactccgatgaatatgtctccttccttgcctccgcgaccggcaacccgaccatcctcgac 337
           |||||||| || || ||| | ||||| || ||||| ||||| ||||||    ||||||||
Sbjct: 241 cactccgacgactacgtcgctttcctcgcgtccgccaccggaaacccgggtgtcctcgac 300

                                                                       
Query: 338 ccccgcgccgtcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttc 397
           || |||||| | |||||||| |||||||| |||||||||||||| || ||||| ||||||
Sbjct: 301 ccgcgcgccattaagcgctttaacgtcggtgaggactgccccgtgttcgacggtctcttc 360

                                                                       
Query: 398 cccttctgccaggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggt 457
           |||||||||||||||||||| || || ||||||||||||||||||||||| ||||| || 
Sbjct: 361 cccttctgccaggcctccgctgggggaagcatcggcgccgccgtcaagcttaaccgcggg 420

                                                                       
Query: 458 gacgccgacatcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcc 517
           ||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 421 gacgccgacatcaccgtcaactgggcgggcggcctccaccacgccaagaagagcgaggcc 480

                         
Query: 518 tctgggttctgcta 531
           || |||||||||||
Sbjct: 481 tccgggttctgcta 494

---

>gb|AF440226.1| Zea mays histone deacetylase (HDA108) mRNA, partial cds
          Length = 1662

 Score =  424 bits (214), Expect = e-115
 Identities = 370/422 (87%)
 Strand = Plus / Plus

                                                                       
Query: 110 agctacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaag 169
           ||||| |||||||||||  ||||||| |||||||||||| |||| || ||||||||||||
Sbjct: 7   agctatttctacgagccgtcgatcggagactactactacgggcaaggtcacccgatgaag 66

                                                                       
Query: 170 ccccaccgcatccgcatggcgcactcgctggttatccactatggtctgcaccgcctgctc 229
           |||||||||||||| |||||||||||||||||  ||||||| || || |||||||| |||
Sbjct: 67  ccccaccgcatccgaatggcgcactcgctggtggtccactacggcctccaccgcctcctc 126

                                                                       
Query: 230 gagctctcgcgccccttccctgcctcggaagccgacatcagccgcttccactccgatgaa 289
           |||||||| ||||||| ||| ||||| || ||||||||| |||||||||||||||| || 
Sbjct: 127 gagctctcccgcccctacccggcctctgaggccgacatccgccgcttccactccgacgac 186

                                                                       
Query: 290 tatgtctccttccttgcctccgcgaccggcaacccgaccatcctcgacccccgcgccgtc 349
           || ||| | ||||| || ||||| ||||| ||||||    |||||||||| |||||| | 
Sbjct: 187 tacgtcgctttcctcgcgtccgccaccggaaacccgggtgtcctcgacccgcgcgccatt 246

                                                                       
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccag 409
           |||||||| |||||||| |||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 247 aagcgctttaacgtcggtgaggactgccccgtgttcgacggtctcttccccttctgccag 306

                                                                       
Query: 410 gcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatc 469
           |||||||| || || ||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 307 gcctccgctgggggaagcatcggcgccgccgtcaagcttaaccgcggggacgccgacatc 366

                                                                       
Query: 470 accgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgc 529
           ||||| |||||||| ||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 367 accgtcaactgggcgggcggcctccaccacgccaagaagagcgaggcctccgggttctgc 426

             
Query: 530 ta 531
           ||
Sbjct: 427 ta 428

---

>gb|AF513382.1| Oryza sativa (japonica cultivar-group) histone deacetylase HDAC1
           mRNA, complete cds; alternatively spliced
          Length = 1859

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
           ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 379 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 438

                                                                       
Query: 408 aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
           || ||| |||||| ||   | |||||| |||||||||||||||||  ||   |  |||||
Sbjct: 439 agacctacgccgggggatccgtcggcggcgccgtcaagctcaaccacgg---ccacgaca 495

                                                                       
Query: 468 tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
           || || | |||||||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 496 tcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctcgggattct 555

               
Query: 528 gcta 531
           ||||
Sbjct: 556 gcta 559



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccg 183
           ||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 169 actactactacgggcaggggcacccgatgaagccgcaccgcatccg 214

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Minus

                                                                            
Query: 348      tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
                ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 22451983 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 22451924

                                                                            
Query: 408      aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
                || ||| |||||| ||   | |||||| |||||||||||||||||  ||   |  |||||
Sbjct: 22451923 agacctacgccgggggatccgtcggcggcgccgtcaagctcaaccacgg---ccacgaca 22451867

                                                                            
Query: 468      tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
                || || | |||||||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 22451866 tcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctcgggattct 22451807

                    
Query: 528      gcta 531
                ||||
Sbjct: 22451806 gcta 22451803



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 138      actactactacaggcagggccacccgatgaagccccaccgcatccg 183
                ||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 22452193 actactactacgggcaggggcacccgatgaagccgcaccgcatccg 22452148



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                           
Query: 348     tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
               |||||| |||||||||||| ||||||| ||||||||| ||||| |||| |  ||||||||
Sbjct: 6479798 tcaagcacttcaacgtcggcgaggactaccccgtcttcgacggcctctacagcttctgcc 6479739

                 
Query: 408     ag 409
               ||
Sbjct: 6479738 ag 6479737



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 80      ggcggcgaggacggccgccgccgt 103
               ||||||||||||||||||| ||||
Sbjct: 7192559 ggcggcgaggacggccgccaccgt 7192536

---

>gb|AF332875.1|AF332875 Oryza sativa histone deacetylase HD1 mRNA, complete cds
          Length = 1579

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
           ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 323 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 382

                                                                       
Query: 408 aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
           || ||| |||||| ||   | |||||| |||||||||||||||||  ||   |  |||||
Sbjct: 383 agacctacgccgggggatccgtcggcggcgccgtcaagctcaaccacgg---ccacgaca 439

                                                                       
Query: 468 tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
           || || | |||||||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 440 tcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctccggcttct 499

               
Query: 528 gcta 531
           ||||
Sbjct: 500 gcta 503



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccg 183
           ||||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct: 113 actactactgcgggcaggggcacccgatgaagccccaccgcatccg 158

---

>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0498C03
          Length = 146394

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Minus

                                                                         
Query: 348   tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
             ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 89116 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 89057

                                                                         
Query: 408   aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
             || ||| |||||| ||   | |||||| |||||||||||||||||  ||   |  |||||
Sbjct: 89056 agacctacgccgggggatccgtcggcggcgccgtcaagctcaaccacgg---ccacgaca 89000

                                                                         
Query: 468   tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
             || || | |||||||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 88999 tcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctcgggattct 88940

                 
Query: 528   gcta 531
             ||||
Sbjct: 88939 gcta 88936



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 138   actactactacaggcagggccacccgatgaagccccaccgcatccg 183
             ||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 89326 actactactacgggcaggggcacccgatgaagccgcaccgcatccg 89281

---

>dbj|AK068682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158M05, full
           insert sequence
          Length = 2119

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
           ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 396 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 455

                                                                       
Query: 408 aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
           || ||| |||||| ||   | |||||| |||||||||||||||||  ||   |  |||||
Sbjct: 456 agacctacgccgggggatccgtcggcggcgccgtcaagctcaaccacgg---ccacgaca 512

                                                                       
Query: 468 tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
           || || | |||||||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 513 tcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctcgggattct 572

               
Query: 528 gcta 531
           ||||
Sbjct: 573 gcta 576



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccg 183
           ||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 186 actactactacgggcaggggcacccgatgaagccgcaccgcatccg 231

---

>dbj|AK068051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B02, full
           insert sequence
          Length = 2511

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
           ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 396 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 455

                                                                       
Query: 408 aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
           || ||| |||||| ||   | |||||| |||||||||||||||||  ||   |  |||||
Sbjct: 456 agacctacgccgggggatccgtcggcggcgccgtcaagctcaaccacgg---ccacgaca 512

                                                                       
Query: 468 tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
           || || | |||||||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 513 tcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctcgggattct 572

               
Query: 528 gcta 531
           ||||
Sbjct: 573 gcta 576



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccg 183
           ||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 186 actactactacgggcaggggcacccgatgaagccgcaccgcatccg 231

---

>ref|XM_464642.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 908

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 378 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 437

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 438 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 497

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 498 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 556



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 138 actactactacaggcagggccacccgatgaagccccaccgc 178
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 157 actactactacgggcagggtcacccgatgaagccccaccgc 197

---

>ref|XM_464641.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1943

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 464 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 523

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 524 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 583

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 584 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 642



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 138 actactactacaggcagggccacccgatgaagccccaccgc 178
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 243 actactactacgggcagggtcacccgatgaagccccaccgc 283

---

>gb|AF513383.1| Oryza sativa (japonica cultivar-group) histone deacetylase HDAC2
           mRNA, complete cds; alternatively spliced
          Length = 1703

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 459 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 518

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 519 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 578

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 579 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 637



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 138 actactactacaggcagggccacccgatgaagccccaccgc 178
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 238 actactactacgggcagggtcacccgatgaagccccaccgc 278

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                           
Query: 353     cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
               |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 6446644 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 6446703

                                                                           
Query: 413     tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
               | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 6446704 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 6446763

                                                                          
Query: 473     gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
                | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 6446764 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 6446822



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Minus

                                                                           
Query: 353     cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
               ||||||||| ||||   ||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 6429264 cgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacc 6429205

                                                                           
Query: 413     tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
               | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 6429204 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 6429145

                                                                          
Query: 473     gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
                | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 6429144 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 6429086



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                        
Query: 138     actactactacaggcagggccacccgatgaagccccaccgc 178
               ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 6446423 actactactacgggcagggtcacccgatgaagccccaccgc 6446463



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 138     actactactacaggcagggccacccgatgaagccccaccg 177
               ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 6429485 actactactacggtcagggccacccgatgaagccccaccg 6429446

---

>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_D05
          Length = 128178

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                         
Query: 353   cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
             |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 88637 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 88696

                                                                         
Query: 413   tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
             | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 88697 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 88756

                                                                        
Query: 473   gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
              | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 88757 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 88815



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Minus

                                                                         
Query: 353   cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
             ||||||||| ||||   ||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 71257 cgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacc 71198

                                                                         
Query: 413   tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
             | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 71197 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 71138

                                                                        
Query: 473   gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
              | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 71137 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 71079



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                      
Query: 138   actactactacaggcagggccacccgatgaagccccaccgc 178
             ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 88416 actactactacgggcagggtcacccgatgaagccccaccgc 88456



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 138   actactactacaggcagggccacccgatgaagccccaccg 177
             ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 71478 actactactacggtcagggccacccgatgaagccccaccg 71439

---

>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:B1307A11
          Length = 131538

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 353  cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
            |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 7257 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 7316

                                                                        
Query: 413  tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
            | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 7317 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 7376

                                                                       
Query: 473  gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
             | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 7377 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 7435



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                     
Query: 138  actactactacaggcagggccacccgatgaagccccaccgc 178
            ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 7036 actactactacgggcagggtcacccgatgaagccccaccgc 7076

---

>dbj|AK103097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118M13, full
           insert sequence
          Length = 1942

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           |||||||||||||| ||||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 463 cgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacgcctactgccagacc 522

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 523 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 582

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 583 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 641



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 138 actactactacaggcagggccacccgatgaagccccaccgc 178
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 242 actactactacgggcagggtcacccgatgaagccccaccgc 282

---

>gb|BT009381.1| Triticum aestivum clone wlm96.pk032.f11:fis, full insert mRNA
           sequence
          Length = 1874

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 150/184 (81%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
           ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 412 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 471

                                                                       
Query: 408 aggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgaca 467
           || ||| ||| || | |  | |||||| |||||||||||||||||  ||   |   ||||
Sbjct: 472 agacctacgcgggggcctccgtcggcggcgccgtcaagctcaaccacgg---ccttgaca 528

                                                                       
Query: 468 tcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttct 527
           || || | |||||| | || || || |||||||| |||||| |||||||||| |||||||
Sbjct: 529 tcgccatcaactggtcggggggcctgcaccacgctaagaagtgcgaggcctcggggttct 588

               
Query: 528 gcta 531
           ||||
Sbjct: 589 gcta 592



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                       
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgc 197
           ||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||
Sbjct: 202 actactactacgggcagggccacccgatgaagccgcaccgcatccgcatgacccactcgc 261

             
Query: 198 tg 199
           ||
Sbjct: 262 tg 263

---

>ref|NM_125705.2| Arabidopsis thaliana HDA6 (HISTONE DEACETYLASE 6); histone
           deacetylase AT5G63110 (HDA6) mRNA, complete cds
          Length = 1733

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 187 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 246

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 247 caccggatccgtatggc 263

---

>gb|AY142660.1| Arabidopsis thaliana putative histone deacetylase (At5g63110) mRNA,
           complete cds
          Length = 1447

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 67  tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 126

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 127 caccggatccgtatggc 143

---

>gb|AY072201.1| Arabidopsis thaliana putative histone deacetylase (At5g63110) mRNA,
           complete cds
          Length = 1704

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 142 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 201

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 202 caccggatccgtatggc 218

---

>emb|BX834033.1|CNS0A20D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZC05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 658

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 145 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 204

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 205 caccggatccgtatggc 221

---

>emb|BX830147.1|CNS0A1C8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZD11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1585

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 142 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 201

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 202 caccggatccgtatggc 218

---

>emb|BX829582.1|CNS0A1JB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB22ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1598

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 151 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 210

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 211 caccggatccgtatggc 227

---

>emb|BX829580.1|CNS0A1IE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB22ZD08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1526

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 92  tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 151

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 152 caccggatccgtatggc 168

---

>emb|BX831490.1|CNS0A0YZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZB10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1613

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 143 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 202

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 203 caccggatccgtatggc 219

---

>gb|AF195548.1|AF195548 Arabidopsis thaliana putative histone deacetylase (RPD3B) mRNA,
           complete cds
          Length = 1733

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 187 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 246

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 247 caccggatccgtatggc 263

---

>gb|AY088314.1| Arabidopsis thaliana clone 5511 mRNA, complete sequence
          Length = 1611

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
           |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 166 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 225

                            
Query: 173 caccgcatccgcatggc 189
           ||||| ||||| |||||
Sbjct: 226 caccggatccgtatggc 242

---

>dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12
          Length = 81662

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 113   tacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagccc 172
             |||||||||||||| |||||||| |||||||||||| | || ||||||||||||||||| 
Sbjct: 26796 tacttctacgagccgacgatcggagactactactacggtcaaggccacccgatgaagcct 26737

                              
Query: 173   caccgcatccgcatggc 189
             ||||| ||||| |||||
Sbjct: 26736 caccggatccgtatggc 26720

---

>ref|XM_464639.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1026

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           ||||||||| ||||   ||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 328 cgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacc 387

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 388 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 447

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 448 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 506



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 138 actactactacaggcagggccacccgatgaagccccaccg 177
           ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 107 actactactacggtcagggccacccgatgaagccccaccg 146

---

>ref|XM_464638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           ||||||||| ||||   ||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 328 cgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacc 387

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 388 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 447

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 448 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 506



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 138 actactactacaggcagggccacccgatgaagccccaccg 177
           ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 107 actactactacggtcagggccacccgatgaagccccaccg 146

---

>gb|AF513384.1| Oryza sativa (japonica cultivar-group) histone deacetylase HDAC3
           mRNA, complete cds; alternatively spliced
          Length = 2043

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           ||||||||| ||||   ||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 424 cgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacc 483

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 484 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 543

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 544 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 602



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 138 actactactacaggcagggccacccgatgaagccccaccg 177
           ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 203 actactactacggtcagggccacccgatgaagccccaccg 242

---

>dbj|AK071228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085P09, full
           insert sequence
          Length = 938

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 145/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 353 cgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgccaggcc 412
           ||||||||| ||||   ||||||||||||||| ||||| |||| | ||| ||||||| ||
Sbjct: 381 cgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacc 440

                                                                       
Query: 413 tccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgccgacatcacc 472
           | ||| || | |  | ||||||||||||||||||||||||  ||   |  ||||||| ||
Sbjct: 441 tacgcgggggcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgcc 500

                                                                      
Query: 473 gtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
            | |||||| |||||||| | |||||||||||||||  ||||||||| || ||||||||
Sbjct: 501 atcaactggtccggcgggttgcaccacgccaagaagtccgaggcctccggcttctgcta 559



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 138 actactactacaggcagggccacccgatgaagccccaccg 177
           ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 160 actactactacggtcagggccacccgatgaagccccaccg 199

---

>gb|AY107370.1| Zea mays PCO095363 mRNA sequence
          Length = 2019

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||
Sbjct: 575 aactgggccggcggactccaccacgccaagaagtgcgaggcctccgggttttgctatgt 633



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccgcatg 187
           ||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 240 actactactacgggcagggccacccgatgaagccgcaccgcatccgcatg 289



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactct 395
           ||||||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 450 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggtctct 497

---

>gb|AF384032.1| Zea mays histone deacetylase HDA101 (hda101) mRNA, complete cds
          Length = 1906

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgc 197
           ||||||||||| |||||||||| ||||||||||| ||||||||||| ||| |||||||||
Sbjct: 141 actactactacgggcagggccatccgatgaagccgcaccgcatccggatgacgcactcgc 200

             
Query: 198 tg 199
           ||
Sbjct: 201 tg 202



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
           ||||||||||||||||||| ||||||||||||||||| ||||| |||| |  ||||||||
Sbjct: 351 tcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctacagcttctgcc 410

             
Query: 408 ag 409
           ||
Sbjct: 411 ag 412



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 494 caccacgccaagaagggcgaggcctctgggttctgcta 531
           ||||||||||||||| ||||||| || || ||||||||
Sbjct: 494 caccacgccaagaagtgcgaggcgtcgggcttctgcta 531

---

>gb|AY112571.1| Zea mays CL997_1 mRNA sequence
          Length = 2130

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgc 197
           ||||||||||| |||||||||| ||||||||||| ||||||||||| ||| |||||||||
Sbjct: 244 actactactacgggcagggccatccgatgaagccgcaccgcatccggatgacgcactcgc 303

             
Query: 198 tg 199
           ||
Sbjct: 304 tg 305



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 454 tcaagcgcttcaacgtcggcgaggagtgccccgtcttggacgg 496

---

>gb|AF035815.1|AF035815 Zea mays putative histone deacetylase RPD3 mRNA, complete cds
          Length = 2047

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 138 actactactacaggcagggccacccgatgaagccccaccgcatccgcatggcgcactcgc 197
           ||||||||||| |||||||||| ||||||||||| ||||||||||| ||| |||||||||
Sbjct: 244 actactactacgggcagggccatccgatgaagccgcaccgcatccggatgacgcactcgc 303

             
Query: 198 tg 199
           ||
Sbjct: 304 tg 305



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 348 tcaagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 454 tcaagcgcttcaacgtcggcgaggagtgccccgtcttggacgg 496

---

>dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39H01, TM0172,
            complete sequence
          Length = 127731

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                        
Query: 403  ctgccaggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgc 462
            ||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||| ||
Sbjct: 9045 ctgccaggcctccgccggtggctccctcggcgccgccgtcaagctcaaccgcggtgaggc 8986

                  
Query: 463  cgacat 468
             |||||
Sbjct: 8985 tgacat 8980



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                         
Query: 403   ctgccaggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggtgacgc 462
             ||||||||||||||| ||||||  | ||||||||||||||||||||||||| ||||| ||
Sbjct: 42860 ctgccaggcctccgctggtggctccctcggcgccgccgtcaagctcaaccgcggtgaagc 42801

                   
Query: 463   cgacat 468
              |||||
Sbjct: 42800 tgacat 42795



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 112  ctacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagcc 171
            |||||||||||| ||  |||||||||| ||||||||| | || |||||||||||||| ||
Sbjct: 9342 ctacttctacgaaccatcgatcggcgattactactacggccaaggccacccgatgaaacc 9283

                  
Query: 172  ccaccg 177
            ||||||
Sbjct: 9282 ccaccg 9277



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 112   ctacttctacgagcccacgatcggcgactactactacaggcagggccacccgatgaagcc 171
             |||||||||||| ||  | ||||| || ||||||||| | || |||||||||||||| ||
Sbjct: 43157 ctacttctacgaaccatcaatcggtgattactactacggccaaggccacccgatgaaacc 43098

                   
Query: 172   ccaccg 177
             ||||||
Sbjct: 43097 ccaccg 43092



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 262  cgacatcagccgcttccactccga 285
            ||||||| ||||||||||||||||
Sbjct: 9192 cgacatccgccgcttccactccga 9169

---

>ref|XM_464643.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1929

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 138 actactactacaggcagggccacccgatgaagccccaccgc 178
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 246 actactactacgggcagggtcacccgatgaagccccaccgc 286

---

>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1234_D05, complete sequence
          Length = 107476

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                         
Query: 348   tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
             ||||||||||||| ||||| |||||||  |||||||| ||||| |||| |  ||||||||
Sbjct: 25758 tcaagcgcttcaatgtcggcgaggactagcccgtcttcgacggcctctacagcttctgcc 25699

                                                          
Query: 408   aggcctccgccggtggcagcatcggcgccgccgtcaagctcaacc 452
             || ||| |||||| |||  ||||| ||  ||| ||||||||||||
Sbjct: 25698 agacctacgccggcggctccatcgacggtgccatcaagctcaacc 25654

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                            
Query: 348      tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
                ||||||||||||| ||||| |||||||  |||||||| ||||| |||| |  ||||||||
Sbjct: 13481712 tcaagcgcttcaatgtcggcgaggactagcccgtcttcgacggcctctacagcttctgcc 13481653

                                                             
Query: 408      aggcctccgccggtggcagcatcggcgccgccgtcaagctcaacc 452
                || ||| |||||| |||  ||||| ||  ||| ||||||||||||
Sbjct: 13481652 agacctacgccggcggctccatcgacggtgccatcaagctcaacc 13481608

---

>dbj|AK064000.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F07, full
           insert sequence
          Length = 1929

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 138 actactactacaggcagggccacccgatgaagccccaccgc 178
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 246 actactactacgggcagggtcacccgatgaagccccaccgc 286

---

>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete
              sequence; frRUNX3 (frRUNX3) gene, complete cds; and
              frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes,
              complete sequence
          Length = 271832

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 476    aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
              ||||||||||| ||||| ||||||||||||||   ||||||||| || |||||||||||
Sbjct: 172500 aactgggccggagggcttcaccacgccaagaaatccgaggcctcgggattctgctatgt 172558

---

>gb|AF411956.1| Takifugu rubripes lck gene locus, partial sequence
          Length = 60169

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 476   aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
             ||||||||||| ||||| ||||||||||||||   ||||||||| || |||||||||||
Sbjct: 28809 aactgggccggagggcttcaccacgccaagaaatccgaggcctcgggattctgctatgt 28867

---

>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0638H11
          Length = 162746

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                          
Query: 348    tcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttccccttctgcc 407
              |||||| |||||||||||| ||||||| ||||||||| ||||| |||| |  ||||||||
Sbjct: 146742 tcaagcacttcaacgtcggcgaggactaccccgtcttcgacggcctctacagcttctgcc 146683

                
Query: 408    ag 409
              ||
Sbjct: 146682 ag 146681

---

>ref|NM_122951.1| Arabidopsis thaliana histone deacetylase AT5G35600 mRNA, complete
           cds
          Length = 1230

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 113 tacttctacgagcccacgatcggcgactactactac 148
           |||||||||||||| | |||||||||||||||||||
Sbjct: 40  tacttctacgagccaatgatcggcgactactactac 75

---

>gb|DQ447001.1| Arabidopsis thaliana clone pENTR221-At5g35600 histone deacetylase
           (At5g35600) mRNA, complete cds
          Length = 1230

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 113 tacttctacgagcccacgatcggcgactactactac 148
           |||||||||||||| | |||||||||||||||||||
Sbjct: 40  tacttctacgagccaatgatcggcgactactactac 75

---

>gb|AF510166.1| Arabidopsis thaliana HDA7 mRNA, complete cds
          Length = 1230

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 113 tacttctacgagcccacgatcggcgactactactac 148
           |||||||||||||| | |||||||||||||||||||
Sbjct: 40  tacttctacgagccaatgatcggcgactactactac 75

---

>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18
          Length = 41465

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 113   tacttctacgagcccacgatcggcgactactactac 148
             |||||||||||||| | |||||||||||||||||||
Sbjct: 23030 tacttctacgagccaatgatcggcgactactactac 22995

---

>ref|XM_853060.1| PREDICTED: Canis familiaris similar to histone deacetylase 3,
           transcript variant 6 (LOC478040), mRNA
          Length = 1855

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || |||||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 278 aactgggctggtggtctccaccatgccaagaagtttgaggcctctggcttctgctatgt 336

---

>ref|XM_853020.1| PREDICTED: Canis familiaris similar to histone deacetylase 3,
           transcript variant 5 (LOC478040), mRNA
          Length = 1771

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || |||||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 194 aactgggctggtggtctccaccatgccaagaagtttgaggcctctggcttctgctatgt 252

---

>ref|XM_535219.2| PREDICTED: Canis familiaris similar to histone deacetylase 3,
           transcript variant 1 (LOC478040), mRNA
          Length = 2006

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || |||||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 429 aactgggctggtggtctccaccatgccaagaagtttgaggcctctggcttctgctatgt 487

---

>ref|XM_852894.1| PREDICTED: Canis familiaris similar to histone deacetylase 3,
           transcript variant 3 (LOC478040), mRNA
          Length = 600

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || |||||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 261 aactgggctggtggtctccaccatgccaagaagtttgaggcctctggcttctgctatgt 319

---

>ref|NM_119974.2| Arabidopsis thaliana HD1; histone deacetylase AT4G38130 (HD1) mRNA,
           complete cds
          Length = 1889

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 606 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 658



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 480 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 520



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 294 atgaagccccatcgcatccgcatg 317

---

>gb|BT008873.1| Arabidopsis thaliana At4g38130 mRNA, complete cds
          Length = 1506

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 424 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 476



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 298 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 338



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 112 atgaagccccatcgcatccgcatg 135

---

>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 476  aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
            |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 7574 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 7522



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 350  aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
            ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 7700 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 7660



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 164  atgaagccccaccgcatccgcatg 187
            ||||||||||| ||||||||||||
Sbjct: 7886 atgaagccccatcgcatccgcatg 7863

---

>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 476   aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
             |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 86652 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 86600



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 350   aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
             ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 86778 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 86738



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 164   atgaagccccaccgcatccgcatg 187
             ||||||||||| ||||||||||||
Sbjct: 86964 atgaagccccatcgcatccgcatg 86941

---

>gb|AY093153.1| Arabidopsis thaliana histone deacetylase (At4g38130) mRNA, complete
           cds
          Length = 1845

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 585 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 637



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 459 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 499



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 273 atgaagccccatcgcatccgcatg 296

---

>gb|AF352394.1| Physarum polycephalum putative histone deacetylase mRNA, complete
           cds
          Length = 1894

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 474 tgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatg 533
           |||||||||| || ||| | ||||| || || ||| |||||||||| |||||||||||||
Sbjct: 479 tgaactgggcaggggggttgcaccaagcgaaaaagagcgaggcctccgggttctgctatg 538

            
Query: 534 t 534
           |
Sbjct: 539 t 539

---

>emb|BX827687.1|CNS0A3TR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZC07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1829

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 584 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 636



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacg 389
           ||||||||||| || || || ||||| |||||||||||||
Sbjct: 459 aagcgcttcaatgttggtgaagactgtcccgtctttgacg 498



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 272 atgaagccccatcgcatccgcatg 295

---

>emb|BX827416.1|CNS0A2E5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS52ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1824

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 587 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 639



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 461 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 501



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 275 atgaagccccatcgcatccgcatg 298

---

>gb|AF195547.1|AF195547 Arabidopsis thaliana putative histone deacetylase (RPD3A) mRNA,
           complete cds
          Length = 1807

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 565 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 617



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 439 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 479



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 253 atgaagccccatcgcatccgcatg 276

---

>gb|AF014824.1|AF014824 Arabidopsis thaliana histone deacetylase mRNA, complete cds
          Length = 1808

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctg 528
           |||||||| || || ||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 566 aactgggctggtggtctccatcacgctaagaagtgcgaggcctctggcttctg 618



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 350 aagcgcttcaacgtcggggaggactgccccgtctttgacgg 390
           ||||||||||| || || || ||||| ||||||||||||||
Sbjct: 440 aagcgcttcaatgttggtgaagactgtcccgtctttgacgg 480



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 atgaagccccaccgcatccgcatg 187
           ||||||||||| ||||||||||||
Sbjct: 254 atgaagccccatcgcatccgcatg 277

---

>ref|XM_744381.1| Aspergillus fumigatus Af293 histone deacetylase RpdA (Afu2g03390)
           partial mRNA
          Length = 2067

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 463 cgacatcaccgtgaactgggccggcgggctccaccacgccaagaagggcgaggcctctgg 522
           ||||||| | || ||||||||||| |||||||| ||||| |||||| |||| ||   |||
Sbjct: 414 cgacatcgctgttaactgggccggagggctccatcacgcgaagaagagcgaagcgagtgg 473

                       
Query: 523 gttctgctatgt 534
            |||||||||||
Sbjct: 474 tttctgctatgt 485

---

>ref|XM_364906.1| Magnaporthe grisea 70-15 predicted protein (MG09751.4) partial mRNA
          Length = 1134

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 411 cctccgccggtggcagcatcggc 433
           |||||||||||||||||||||||
Sbjct: 113 cctccgccggtggcagcatcggc 135

---

>gb|BC000614.1| Homo sapiens histone deacetylase 3, mRNA (cDNA clone MGC:2041
           IMAGE:3345755), complete cds
          Length = 1948

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 437 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 495

---

>ref|XM_881752.1| PREDICTED: Bos taurus histone deacetylase 3, transcript variant 8
           (HDAC3), mRNA
          Length = 1683

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 196 aactgggctggtggtctgcaccacgccaagaagtttgaggcttctggtttctgctatgt 254

---

>ref|XM_881738.1| PREDICTED: Bos taurus histone deacetylase 3, transcript variant 7
           (HDAC3), mRNA
          Length = 1941

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 430 aactgggctggtggtctgcaccacgccaagaagtttgaggcttctggtttctgctatgt 488

---

>ref|XM_881724.1| PREDICTED: Bos taurus histone deacetylase 3, transcript variant 6
           (HDAC3), mRNA
          Length = 1767

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 280 aactgggctggtggtctgcaccacgccaagaagtttgaggcttctggtttctgctatgt 338

---

>ref|XM_868478.1| PREDICTED: Bos taurus histone deacetylase 3, transcript variant 2
           (HDAC3), mRNA
          Length = 1917

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 430 aactgggctggtggtctgcaccacgccaagaagtttgaggcttctggtttctgctatgt 488

---

>ref|XM_881669.1| PREDICTED: Bos taurus histone deacetylase 3, transcript variant 3
           (HDAC3), mRNA
          Length = 600

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 261 aactgggctggtggtctgcaccacgccaagaagtttgaggcttctggtttctgctatgt 319

---

>gb|AY429538.1| Homo sapiens HDAC3v_2 mRNA sequence; alternatively spliced
          Length = 358

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 131 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 189

---

>ref|NM_003883.2| Homo sapiens histone deacetylase 3 (HDAC3), mRNA
          Length = 1955

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 437 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 495

---

>emb|CR858777.1| Pongo pygmaeus mRNA; cDNA DKFZp469I1039 (from clone DKFZp469I1039)
          Length = 1921

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 413 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 471

---

>emb|CR615606.1| full-length cDNA clone CS0DK009YM08 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1925

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 430 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 488

---

>emb|CR624340.1| full-length cDNA clone CS0DF022YD13 of Fetal brain of Homo sapiens
           (human)
          Length = 1898

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 431 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 489

---

>emb|CR623951.1| full-length cDNA clone CS0DI021YC13 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1907

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 430 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 488

---

>emb|CR618922.1| full-length cDNA clone CS0DD007YP11 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1896

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 424 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 482

---

>emb|CR592966.1| full-length cDNA clone CS0DC027YF17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1892

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 429 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 487

---

>gb|BC111247.1| Bos taurus cDNA clone IMAGE:8065154, containing frame-shift errors
          Length = 1997

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 434 aactgggctggtggtctgcaccacgccaagaagtttgaggcttctggtttctgctatgt 492

---

>gb|AY889365.1| Synthetic construct Homo sapiens clone FLH117269.01X histone
           deacetylase 3 (HDAC3) mRNA, complete cds
          Length = 1287

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 382 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 440

---

>gb|AF039703.1|AF039703 Homo sapiens histone deacetylase 3 (HDAC3) mRNA, complete cds
          Length = 1920

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 404 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 462

---

>gb|U66914.1|HSU66914 Homo sapiens histone deacetylase 3 (HDAC3) mRNA, complete cds
          Length = 1911

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 393 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 451

---

>gb|U75697.1|HSU75697 Human transcription regulator RPD3-2B mRNA, complete cds
          Length = 1954

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 437 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 495

---

>gb|U75696.1|HSU75696 Human transcription regulator RPD3-2A (hRPD3-2A) mRNA, complete cds
          Length = 1941

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 431 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 489

---

>gb|AF005482.1|AF005482 Homo sapiens histone deacetylase-3C mRNA, complete cds
          Length = 1981

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||| || || || ||||| |||||||||   ||||||||||| |||||||||||
Sbjct: 464 aactgggctggtggtctgcaccatgccaagaagtttgaggcctctggcttctgctatgt 522

---

>gb|AY533375.1| Rhizobium lupini MotA (motA), FliM (fliM), FliN (fliN), FliG (fliG),
            FlhB (flhB), and FlaD (flaD) genes, complete cds; and
            unknown gene
          Length = 7214

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 447  tcaaccgtggtgacgccgacat 468
            ||||||||||||||||||||||
Sbjct: 6436 tcaaccgtggtgacgccgacat 6415

---

>ref|XM_959358.1| Neurospora crassa OR74A hypothetical protein (NCU02795.1) partial
           mRNA
          Length = 5277

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 478 ctgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
           ||||| |||||| || ||||||||||| |||  ||||||||| || ||||||||
Sbjct: 588 ctggggcggcggccttcaccacgccaaaaagtccgaggcctcgggcttctgcta 641

---

>ref|XM_329982.1| Neurospora crassa OR74A hypothetical protein (NCU02795.1) partial
           mRNA
          Length = 5277

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 478 ctgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
           ||||| |||||| || ||||||||||| |||  ||||||||| || ||||||||
Sbjct: 588 ctggggcggcggccttcaccacgccaaaaagtccgaggcctcgggcttctgcta 641

---

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 447    tcaaccgtggtgacgccgacat 468
              ||||||||||||||||||||||
Sbjct: 202304 tcaaccgtggtgacgccgacat 202325

---

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 177     gcatccgcatggcgcactcgc 197
               |||||||||||||||||||||
Sbjct: 1119063 gcatccgcatggcgcactcgc 1119043



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 111     gctacttctacgagcccacgatcg 134
               |||||||||||||||| |||||||
Sbjct: 1347003 gctacttctacgagccgacgatcg 1346980

---

>gb|AC131109.3| Mus musculus BAC clone RP23-362M7 from chromosome 18, complete sequence
          Length = 177690

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 511   cgaggcctctgggttctgcta 531
             |||||||||||||||||||||
Sbjct: 95414 cgaggcctctgggttctgcta 95434

---

>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence
          Length = 200656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 511   cgaggcctctgggttctgcta 531
             |||||||||||||||||||||
Sbjct: 23749 cgaggcctctgggttctgcta 23729

---

>emb|CR731594.2|CNS0GRFZ Tetraodon nigroviridis full-length cDNA
          Length = 2215

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 143 tactacaggcagggccacccgatgaagccccaccgcatccgcatg 187
           |||||| | ||||| || || |||||||||||||| |||||||||
Sbjct: 141 tactacggtcagggacatcccatgaagccccaccgaatccgcatg 185

---

>emb|CR719021.2|CNS0GHQR Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 143 tactacaggcagggccacccgatgaagccccaccgcatccgcatg 187
           |||||| | ||||| || || |||||||||||||| |||||||||
Sbjct: 122 tactacggtcagggacatcccatgaagccccaccgaatccgcatg 166

---

>emb|BX053459.1|CNS09DEV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC31AE07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 625

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 494 caccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 299 caccacgccaagaagtttgaggcgtctggattctgctatgt 339

---

>emb|BX029656.1|CNS08V1O Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA44BC10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 849

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 494 caccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 182 caccacgccaagaagtttgaggcgtctggattctgctatgt 222

---

>gb|AE005870.1| Caulobacter crescentus CB15 section 196 of 359 of the complete genome
          Length = 11934

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 498  acgccaagaagggcgaggcct 518
            |||||||||||||||||||||
Sbjct: 7815 acgccaagaagggcgaggcct 7835

---

>dbj|AK155586.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730003P17
           product:unclassifiable, full insert sequence
          Length = 5007

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 511 cgaggcctctgggttctgcta 531
           |||||||||||||||||||||
Sbjct: 441 cgaggcctctgggttctgcta 421

---

>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 476    aactgggccggcgggctccaccacgccaagaag 508
              |||||| | |||||||| |||||||||||||||
Sbjct: 755369 aactggtcgggcgggctgcaccacgccaagaag 755337

---

>ref|XM_322018.2| Anopheles gambiae str. PEST ENSANGP00000012089
           (ENSANGG00000009600), partial mRNA
          Length = 1302

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 494 caccacgccaagaagggcgaggcctctgggttctgctatgt 534
           |||||||||||||||   ||||| ||||| |||||||||||
Sbjct: 403 caccacgccaagaagtttgaggcgtctggattctgctatgt 443

---

>ref|NM_211073.1| Eremothecium gossypii AFR172Cp (AFR172C), mRNA
          Length = 1350

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 476 aactgggccggcgggctccaccacgccaagaag 508
           |||||| | |||||||| |||||||||||||||
Sbjct: 454 aactggtcgggcgggctgcaccacgccaagaag 486

---

>gb|AC171813.2| Mus musculus BAC clone RP23-75G11 from chromosome 1, complete sequence
          Length = 229986

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 511    cgaggcctctgggttctgcta 531
              |||||||||||||||||||||
Sbjct: 181380 cgaggcctctgggttctgcta 181360

---

>gb|DQ004745.1| Toxoplasma gondii histone deacetylase 3 mRNA, complete cds
          Length = 1356

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 371 gactgccccgtctttgacggactcttccccttc 403
           ||||||||||| |||||||| |||||| |||||
Sbjct: 298 gactgccccgtttttgacggcctcttcaccttc 330

---

>ref|XM_478670.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2607

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  ggcggcgaggacggccgccg 99
           ||||||||||||||||||||
Sbjct: 199 ggcggcgaggacggccgccg 218

---

>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     cggcaggcggcgaggacggc 94
              ||||||||||||||||||||
Sbjct: 852751 cggcaggcggcgaggacggc 852732

---

>ref|XM_422269.1| PREDICTED: Gallus gallus tyrosine kinase ABL (CABL), mRNA
          Length = 3842

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 380  gtctttgacggactcttccccttc 403
            |||||||| |||||||||||||||
Sbjct: 1288 gtctttgaaggactcttccccttc 1311

---

>gb|BC064650.1| Danio rerio histone deacetylase 1, mRNA (cDNA clone MGC:65818
           IMAGE:6793105), complete cds
          Length = 2210

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           |||||||| || |||||||||||| | |||||||||
Sbjct: 117 cagggccatcccatgaagccccacagaatccgcatg 152

---

>ref|XM_587001.2| PREDICTED: Bos taurus similar to adenylate cyclase 6 isoform b,
           transcript variant 1 (LOC509936), mRNA
          Length = 5685

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 agctcaaccgtggtgacgcc 463
           ||||||||||||||||||||
Sbjct: 824 agctcaaccgtggtgacgcc 843

---

>ref|XM_869639.1| PREDICTED: Bos taurus similar to adenylate cyclase 6 isoform b,
           transcript variant 2 (LOC509936), mRNA
          Length = 5844

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 agctcaaccgtggtgacgcc 463
           ||||||||||||||||||||
Sbjct: 824 agctcaaccgtggtgacgcc 843

---

>gb|BC067168.1| Danio rerio histone deacetylase 1, mRNA (cDNA clone IMAGE:6959923),
           containing frame-shift errors
          Length = 2009

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           |||||||| || |||||||||||| | |||||||||
Sbjct: 102 cagggccatcccatgaagccccacagaatccgcatg 137

---

>gb|AC124133.13| Mus musculus chromosome 15, clone RP23-218L23, complete sequence
          Length = 195876

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    gaggcctctgggttctgcta 531
              ||||||||||||||||||||
Sbjct: 171564 gaggcctctgggttctgcta 171545

---

>gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence
          Length = 188544

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   gaggcctctgggttctgcta 531
             ||||||||||||||||||||
Sbjct: 52558 gaggcctctgggttctgcta 52539

---

>ref|XM_843063.1| Leishmania major strain Friedlin FtsJ cell division protein
            (LMJ_0461) partial mRNA
          Length = 2775

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   cggcaggcggcgaggacggc 94
            ||||||||||||||||||||
Sbjct: 1337 cggcaggcggcgaggacggc 1356

---

>gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, complete sequence
          Length = 187791

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   gaggcctctgggttctgcta 531
             ||||||||||||||||||||
Sbjct: 21226 gaggcctctgggttctgcta 21207

---

>ref|XM_504286.1| Yarrowia lipolytica CLIB122, YALI0E22935g predicted mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 155 ggccacccgatgaagccccaccgcatccgcatggcgcactcgct 198
           |||||||| |||||||||||| | || || ||||| ||||||||
Sbjct: 109 ggccaccccatgaagccccacagaatacgaatggcccactcgct 152

---

>ref|XM_964326.1| PREDICTED: Tribolium castaneum similar to CG2128-PA (LOC657899),
           mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 488 gggctccaccacgccaagaa 507
           ||||||||||||||||||||
Sbjct: 397 gggctccaccacgccaagaa 416

---

>emb|CR933645.1| Homo sapiens mRNA; cDNA DKFZp781I1455 (from clone DKFZp781I1455)
          Length = 5057

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gaggacggccgccgccgtcg 105
           ||||||||||||||||||||
Sbjct: 23  gaggacggccgccgccgtcg 4

---

>gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, complete sequence
          Length = 216914

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    gaggcctctgggttctgcta 531
              ||||||||||||||||||||
Sbjct: 179175 gaggcctctgggttctgcta 179156

---

>ref|NM_173236.1| Danio rerio histone deacetylase 1 (hdac1), mRNA
          Length = 2213

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           |||||||| || |||||||||||| | |||||||||
Sbjct: 124 cagggccatcccatgaagccccacagaatccgcatg 159

---

>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     cggcaggcggcgaggacggccgcc 98
              |||||||||||| |||||||||||
Sbjct: 263540 cggcaggcggcggggacggccgcc 263517

---

>emb|CR936664.1| Homo sapiens mRNA; cDNA DKFZp781C1754 (from clone DKFZp781C1754)
          Length = 5056

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gaggacggccgccgccgtcg 105
           ||||||||||||||||||||
Sbjct: 23  gaggacggccgccgccgtcg 4

---

>gb|AC163662.3| Mus musculus BAC clone RP23-299N4 from chromosome 16, complete sequence
          Length = 223645

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 152    cagggccacccgatgaagccccaccgcatccgcatg 187
              ||||||||||| |||||||| ||||| |||| ||||
Sbjct: 204094 cagggccacccaatgaagcctcaccgaatccacatg 204129

---

>gb|BC085375.1| Danio rerio histone deacetylase 1, mRNA (cDNA clone MGC:101582
           IMAGE:7223257), complete cds
          Length = 2263

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           |||||||| || |||||||||||| | |||||||||
Sbjct: 125 cagggccatcccatgaagccccacagaatccgcatg 160

---

>dbj|AB029025.2| Homo sapiens mRNA for KIAA1102 protein, partial cds
          Length = 5113

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gaggacggccgccgccgtcg 105
           ||||||||||||||||||||
Sbjct: 20  gaggacggccgccgccgtcg 1

---

>gb|AF506201.1| Danio rerio histone deaceytlase 1 (hdac1) mRNA, complete cds
          Length = 2213

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           |||||||| || |||||||||||| | |||||||||
Sbjct: 124 cagggccatcccatgaagccccacagaatccgcatg 159

---

>gb|BC108088.1| Bos taurus histone deacetylase 1, mRNA (cDNA clone MGC:127235
           IMAGE:7946064), complete cds
          Length = 2025

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 356 ttcaacgtcggggaggactgccccgtctttga 387
           ||||||||||| |||||||| ||||| |||||
Sbjct: 316 ttcaacgtcggtgaggactgtcccgtatttga 347

---

>ref|XM_683129.1| PREDICTED: Danio rerio similar to histone deacetylase 1
           (LOC572956), partial mRNA
          Length = 311

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           |||||||| || |||||||||||| | |||||||||
Sbjct: 107 cagggccatcccatgaagccccacagaatccgcatg 142

---

>gb|AF044169.1|AF044169 Gallus gallus erythrocyte histone deacetylase (HDAC1) mRNA,
           complete cds
          Length = 1646

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 aacgtcggggaggactgccc 378
           ||||||||||||||||||||
Sbjct: 330 aacgtcggggaggactgccc 349

---

>gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like protein OsCslF4 gene, complete
           cds
          Length = 13642

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  ggcggcgaggacggccgccg 99
           ||||||||||||||||||||
Sbjct: 303 ggcggcgaggacggccgccg 322

---

>gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like protein OsCslF3 gene, complete
           cds
          Length = 13642

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  ggcggcgaggacggccgccg 99
           ||||||||||||||||||||
Sbjct: 303 ggcggcgaggacggccgccg 322

---

>dbj|AK087725.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330011O21
           product:unclassifiable, full insert sequence
          Length = 1076

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 152 cagggccacccgatgaagccccaccgcatccgcatg 187
           ||||||||||| |||||||| ||||| |||| ||||
Sbjct: 828 cagggccacccaatgaagcctcaccgaatccacatg 793

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       ggcggcgaggacggccgccg 99
                ||||||||||||||||||||
Sbjct: 21965407 ggcggcgaggacggccgccg 21965388

---

>gb|AC095043.3| Homo sapiens BAC clone RP11-124A7 from 4, complete sequence
          Length = 178037

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gaggacggccgccgccgtcg 105
              ||||||||||||||||||||
Sbjct: 132684 gaggacggccgccgccgtcg 132665

---

>emb|BX933239.1| Gallus gallus finished cDNA, clone ChEST517f10
          Length = 742

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 aacgtcggggaggactgccc 378
           ||||||||||||||||||||
Sbjct: 528 aacgtcggggaggactgccc 547

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 82      cggcgaggacggccgccgcc 101
               ||||||||||||||||||||
Sbjct: 2205749 cggcgaggacggccgccgcc 2205730

---

>ref|XM_342149.2| PREDICTED: Rattus norvegicus histone deacetylase 2 (Hdac2), mRNA
          Length = 2341

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 476 aactgggccggcgggctccaccacgccaagaagggcgaggcctctgggttctgcta 531
           |||||||| || || || |||||||||||||||   |||||||| || ||||||||
Sbjct: 766 aactgggcgggaggactgcaccacgccaagaagtcagaggcctcaggattctgcta 821

---

>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0068B06
          Length = 143712

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    ggcggcgaggacggccgccgccgt 103
             ||||||||||||||||||| ||||
Sbjct: 69970 ggcggcgaggacggccgccaccgt 69947

---

>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0052G07
          Length = 156207

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    ggcggcgaggacggccgccgccgt 103
             ||||||||||||||||||| ||||
Sbjct: 27563 ggcggcgaggacggccgccaccgt 27540

---

>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0013G11
          Length = 151405

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    ggcggcgaggacggccgccg 99
             ||||||||||||||||||||
Sbjct: 57451 ggcggcgaggacggccgccg 57432

---

>gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, complete sequence
          Length = 198268

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    gaggcctctgggttctgcta 531
              ||||||||||||||||||||
Sbjct: 164852 gaggcctctgggttctgcta 164833

---

>gb|AF039751.1|AF039751 Gallus gallus histone deacetylase-1 mRNA, complete cds
          Length = 1678

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 aacgtcggggaggactgccc 378
           ||||||||||||||||||||
Sbjct: 340 aacgtcggggaggactgccc 359

---

>gb|BC053639.1| Homo sapiens hypothetical protein, mRNA (cDNA clone IMAGE:4538099)
          Length = 1614

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gaggacggccgccgccgtcg 105
           ||||||||||||||||||||
Sbjct: 176 gaggacggccgccgccgtcg 157

---

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      gcggcgaggacggccgccgc 100
               ||||||||||||||||||||
Sbjct: 1785014 gcggcgaggacggccgccgc 1784995

---

>gb|AC140281.5| Mus musculus BAC clone RP24-329M4 from 16, complete sequence
          Length = 146853

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 152    cagggccacccgatgaagccccaccgcatccgcatg 187
              ||||||||||| |||||||| ||||| |||| ||||
Sbjct: 110368 cagggccacccaatgaagcctcaccgaatccacatg 110403

---

>gb|AC130844.3| Mus musculus BAC clone RP24-529I3 from 16, complete sequence
          Length = 168387

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 152   cagggccacccgatgaagccccaccgcatccgcatg 187
             ||||||||||| |||||||| ||||| |||| ||||
Sbjct: 25827 cagggccacccaatgaagcctcaccgaatccacatg 25862

---

>gb|AF043328.1|AF043328 Gallus gallus histone deacetylase 1 (HDAC1A) mRNA, complete cds
          Length = 1646

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 aacgtcggggaggactgccc 378
           ||||||||||||||||||||
Sbjct: 330 aacgtcggggaggactgccc 349

---

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                           
Query: 155     ggccacccgatgaagccccaccgcatccgcatggcgcactcgct 198
               |||||||| |||||||||||| | || || ||||| ||||||||
Sbjct: 2704897 ggccaccccatgaagccccacagaatacgaatggcccactcgct 2704854

---

>ref|NM_014988.1| Homo sapiens hypothetical protein (DKFZP686A01247), mRNA
          Length = 5113

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gaggacggccgccgccgtcg 105
           ||||||||||||||||||||
Sbjct: 20  gaggacggccgccgccgtcg 1

---

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      ggcggcgaggacggccgccg 99
               ||||||||||||||||||||
Sbjct: 2203994 ggcggcgaggacggccgccg 2203975

---

>ref|NM_001037444.1| Bos taurus histone deacetylase 1 (HDAC1), mRNA
          Length = 2025

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 356 ttcaacgtcggggaggactgccccgtctttga 387
           ||||||||||| |||||||| ||||| |||||
Sbjct: 316 ttcaacgtcggtgaggactgtcccgtatttga 347

---

>emb|X60380.1|GGTK1 G.gallus tk1 mRNA for protein tyrosine kinase p56tk1
          Length = 4073

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  aacgtcggggaggactgccc 378
            ||||||||||||||||||||
Sbjct: 2770 aacgtcggggaggactgccc 2789

---

>emb|AL591952.9| Mouse DNA sequence from clone RP23-25N17 on chromosome 15, complete
             sequence
          Length = 208835

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   cgaggcctctgggttctgct 530
             ||||||||||||||||||||
Sbjct: 68621 cgaggcctctgggttctgct 68602

---

>gb|J03579.1|CHKTCKL Chicken tyrosine kinase protooncogene (c-tkl) mRNA, complete cds
          Length = 3701

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  aacgtcggggaggactgccc 378
            ||||||||||||||||||||
Sbjct: 2408 aacgtcggggaggactgccc 2427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,524,452
Number of Sequences: 3902068
Number of extensions: 3524452
Number of successful extensions: 83120
Number of sequences better than 10.0: 158
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 81790
Number of HSP's gapped (non-prelim): 1315
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---