Clone Name | bart27a01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 418 bits (211), Expect = e-114 Identities = 283/307 (92%) Strand = Plus / Minus Query: 116 gagagcagatgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgc 175 ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 22256836 gagaggagatgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgc 22256777 Query: 176 agctggtcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgc 235 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 22256776 agctggtcgtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgc 22256717 Query: 236 cgccgcccggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatct 295 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22256716 cgccgccggggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctgg 22256657 Query: 296 cggccgaggggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccg 355 ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 22256656 cggccgaggggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccg 22256597 Query: 356 ccttcaacgccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagc 415 ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 22256596 ccttcaacgccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagc 22256537 Query: 416 ccggcgc 422 ||||||| Sbjct: 22256536 ccggcgc 22256530 Score = 264 bits (133), Expect = 2e-67 Identities = 256/297 (86%) Strand = Plus / Minus Query: 124 atgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgcagctggtc 183 ||||||||||||| ||||||||| | || ||||| || || || ||||| | || || Sbjct: 22259977 atgggggacgtggtcaaggacctggtggcgggcaccgtcgggggagcggccaacctcatc 22259918 Query: 184 gtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgccc 243 || |||||||| ||||||||||||||||| ||||| |||||||||||||| || | ||| Sbjct: 22259917 gtcggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgccccc 22259858 Query: 244 ggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatctcggccgag 303 ||||| ||||||| |||||||||| | ||||||||||||||||||||| | ||||| Sbjct: 22259857 ggccaattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgag 22259798 Query: 304 gggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccgccttcaac 363 || ||| ||||||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 22259797 ggccccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaac 22259738 Query: 364 gccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagcccggc 420 ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 22259737 gccctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggc 22259681
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 418 bits (211), Expect = e-114 Identities = 283/307 (92%) Strand = Plus / Minus Query: 116 gagagcagatgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgc 175 ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 74079 gagaggagatgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgc 74020 Query: 176 agctggtcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgc 235 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 74019 agctggtcgtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgc 73960 Query: 236 cgccgcccggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatct 295 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 73959 cgccgccggggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctgg 73900 Query: 296 cggccgaggggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccg 355 ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 73899 cggccgaggggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccg 73840 Query: 356 ccttcaacgccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagc 415 ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 73839 ccttcaacgccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagc 73780 Query: 416 ccggcgc 422 ||||||| Sbjct: 73779 ccggcgc 73773 Score = 264 bits (133), Expect = 2e-67 Identities = 256/297 (86%) Strand = Plus / Minus Query: 124 atgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgcagctggtc 183 ||||||||||||| ||||||||| | || ||||| || || || ||||| | || || Sbjct: 77220 atgggggacgtggtcaaggacctggtggcgggcaccgtcgggggagcggccaacctcatc 77161 Query: 184 gtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgccc 243 || |||||||| ||||||||||||||||| ||||| |||||||||||||| || | ||| Sbjct: 77160 gtcggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgccccc 77101 Query: 244 ggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatctcggccgag 303 ||||| ||||||| |||||||||| | ||||||||||||||||||||| | ||||| Sbjct: 77100 ggccaattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgag 77041 Query: 304 gggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccgccttcaac 363 || ||| ||||||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 77040 ggccccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaac 76981 Query: 364 gccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagcccggc 420 ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76980 gccctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggc 76924
>dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A08, full insert sequence Length = 1209 Score = 418 bits (211), Expect = e-114 Identities = 283/307 (92%) Strand = Plus / Plus Query: 116 gagagcagatgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgc 175 ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 97 gagaggagatgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgc 156 Query: 176 agctggtcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgc 235 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 157 agctggtcgtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgc 216 Query: 236 cgccgcccggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatct 295 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 217 cgccgccggggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctgg 276 Query: 296 cggccgaggggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccg 355 ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 277 cggccgaggggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccg 336 Query: 356 ccttcaacgccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagc 415 ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 337 ccttcaacgccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagc 396 Query: 416 ccggcgc 422 ||||||| Sbjct: 397 ccggcgc 403
>dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D17, full insert sequence Length = 1230 Score = 418 bits (211), Expect = e-114 Identities = 283/307 (92%) Strand = Plus / Plus Query: 116 gagagcagatgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgc 175 ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 116 gagaggagatgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgc 175 Query: 176 agctggtcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgc 235 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 176 agctggtcgtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgc 235 Query: 236 cgccgcccggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatct 295 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 236 cgccgccggggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctgg 295 Query: 296 cggccgaggggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccg 355 ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 296 cggccgaggggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccg 355 Query: 356 ccttcaacgccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagc 415 ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 356 ccttcaacgccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagc 415 Query: 416 ccggcgc 422 ||||||| Sbjct: 416 ccggcgc 422
>dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C17, full insert sequence Length = 1230 Score = 418 bits (211), Expect = e-114 Identities = 283/307 (92%) Strand = Plus / Plus Query: 116 gagagcagatgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgc 175 ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 116 gagaggagatgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgc 175 Query: 176 agctggtcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgc 235 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 176 agctggtcgtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgc 235 Query: 236 cgccgcccggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatct 295 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 236 cgccgccggggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctgg 295 Query: 296 cggccgaggggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccg 355 ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 296 cggccgaggggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccg 355 Query: 356 ccttcaacgccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagc 415 ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 356 ccttcaacgccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagc 415 Query: 416 ccggcgc 422 ||||||| Sbjct: 416 ccggcgc 422
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 418 bits (211), Expect = e-114 Identities = 283/307 (92%) Strand = Plus / Minus Query: 116 gagagcagatgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgc 175 ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 22268904 gagaggagatgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgc 22268845 Query: 176 agctggtcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgc 235 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 22268844 agctggtcgtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgc 22268785 Query: 236 cgccgcccggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatct 295 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22268784 cgccgccggggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctgg 22268725 Query: 296 cggccgaggggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccg 355 ||||||||||||| ||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 22268724 cggccgaggggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccg 22268665 Query: 356 ccttcaacgccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagc 415 ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 22268664 ccttcaacgccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagc 22268605 Query: 416 ccggcgc 422 ||||||| Sbjct: 22268604 ccggcgc 22268598 Score = 264 bits (133), Expect = 2e-67 Identities = 256/297 (86%) Strand = Plus / Minus Query: 124 atgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgcagctggtc 183 ||||||||||||| ||||||||| | || ||||| || || || ||||| | || || Sbjct: 22272045 atgggggacgtggtcaaggacctggtggcgggcaccgtcgggggagcggccaacctcatc 22271986 Query: 184 gtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgccc 243 || |||||||| ||||||||||||||||| ||||| |||||||||||||| || | ||| Sbjct: 22271985 gtcggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgccccc 22271926 Query: 244 ggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatctcggccgag 303 ||||| ||||||| |||||||||| | ||||||||||||||||||||| | ||||| Sbjct: 22271925 ggccaattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgag 22271866 Query: 304 gggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccgccttcaac 363 || ||| ||||||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 22271865 ggccccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaac 22271806 Query: 364 gccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagcccggc 420 ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 22271805 gccctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggc 22271749
>ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative carnitine/acylcarnitine translocase (OSJNBa0003O19.8), mRNA Length = 1105 Score = 410 bits (207), Expect = e-111 Identities = 276/299 (92%) Strand = Plus / Plus Query: 124 atgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgcagctggtc 183 ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1 atgggtgacgtggccaaggacctgacggccggcacggtgggcggggcggcgcagctggtc 60 Query: 184 gtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgccc 243 ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 61 gtggggcaccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccg 120 Query: 244 ggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatctcggccgag 303 || |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 121 gggcagccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgag 180 Query: 304 gggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccgccttcaac 363 ||||| ||||||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 181 gggccgaggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaac 240 Query: 364 gccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagcccggcgc 422 ||| | ||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 241 gccctcctcttcaccgtcaggggccagatggaggccgtgctgcgctccgagcccggcgc 299
>ref|NM_197856.1| Oryza sativa (japonica cultivar-group) putative carnitine/acylcarnitine translocase (OSJNBa0003O19.7), mRNA Length = 1580 Score = 264 bits (133), Expect = 2e-67 Identities = 256/297 (86%) Strand = Plus / Plus Query: 124 atgggggacgtggccaaggaccttgccgccggcacggtgggcggggcggcgcagctggtc 183 ||||||||||||| ||||||||| | || ||||| || || || ||||| | || || Sbjct: 79 atgggggacgtggtcaaggacctggtggcgggcaccgtcgggggagcggccaacctcatc 138 Query: 184 gtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgccc 243 || |||||||| ||||||||||||||||| ||||| |||||||||||||| || | ||| Sbjct: 139 gtcggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgccccc 198 Query: 244 ggccagccgcccaagttcgccggcgccatggacgccgtcaagcagaccatctcggccgag 303 ||||| ||||||| |||||||||| | ||||||||||||||||||||| | ||||| Sbjct: 199 ggccaattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgag 258 Query: 304 gggccccggggcctatacaagggcatgggcgccccgctcgccaccgtcgccgccttcaac 363 || ||| ||||||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 259 ggccccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaac 318 Query: 364 gccgtgctcttcaccgtcaggggacagatggaggccctgctgcgctccgagcccggc 420 ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 319 gccctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggc 375
>ref|XM_414400.1| PREDICTED: Gallus gallus similar to Slc25a20-prov protein (LOC416062), mRNA Length = 2042 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 182 tcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgc 241 ||||||| |||||| | |||||||||||||| | ||||||| ||||||| ||||| || Sbjct: 130 tcgtggggcacccgctggacaccatcaaggtcagactgcagacccagccccggccgcagc 189 Query: 242 ccggccagccgcc 254 ||||||||||||| Sbjct: 190 ccggccagccgcc 202
>emb|BX932308.2| Gallus gallus finished cDNA, clone ChEST358i1 Length = 1028 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 182 tcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgc 241 ||||||| |||||| | |||||||||||||| | ||||||| ||||||| ||||| || Sbjct: 117 tcgtggggcacccgctggacaccatcaaggtcagactgcagacccagccccggccgcagc 176 Query: 242 ccggccagccgcc 254 ||||||||||||| Sbjct: 177 ccggccagccgcc 189
>emb|BX931997.1| Gallus gallus finished cDNA, clone ChEST220g19 Length = 1041 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 182 tcgtgggccacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgc 241 ||||||| |||||| | |||||||||||||| | ||||||| ||||||| ||||| || Sbjct: 130 tcgtggggcacccgctggacaccatcaaggtcagactgcagacccagccccggccgcagc 189 Query: 242 ccggccagccgcc 254 ||||||||||||| Sbjct: 190 ccggccagccgcc 202
>dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16B11, TM0182, complete sequence Length = 80583 Score = 46.1 bits (23), Expect = 0.093 Identities = 59/71 (83%) Strand = Plus / Minus Query: 190 cacccgttcgacaccatcaaggtgaagctgcagagccagcccacgccgccgcccggccag 249 ||||| || |||||||||||||| ||||| || |||||||| || || | ||||| ||| Sbjct: 78512 cacccctttgacaccatcaaggtcaagctccaaagccagcctacaccactccccggtcag 78453 Query: 250 ccgcccaagtt 260 || |||||||| Sbjct: 78452 cctcccaagtt 78442
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 350 tcgccgccttcaacgccgtgctcttc 375 ||||| |||||||||||||||||||| Sbjct: 323033 tcgcccccttcaacgccgtgctcttc 323008
>ref|XM_756600.1| Ustilago maydis 521 hypothetical protein (UM05546.1) partial mRNA Length = 1161 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 184 gtgggccacccgttcgacaccatcaaggtg 213 ||||| |||||||||||||| ||||||||| Sbjct: 265 gtgggtcacccgttcgacacgatcaaggtg 294
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 406 cgctccgagcccggcgccgcgc 427 |||||||||||||||||||||| Sbjct: 755957 cgctccgagcccggcgccgcgc 755936
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 gctcgccaccgtcgccgccttc 360 |||||||||||||||||||||| Sbjct: 45779 gctcgccaccgtcgccgccttc 45800 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 261 cgccggcgccatggacgccgtcaagcagacca 292 ||||| || |||||||||||| |||||||||| Sbjct: 84842 cgccgacggcatggacgccgtgaagcagacca 84811
>gb|AC114493.3| Homo sapiens chromosome 1 clone RP11-336O20, complete sequence Length = 179221 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gccgccgcccggccagccgccc 255 |||||||||||||||||||||| Sbjct: 39437 gccgccgcccggccagccgccc 39416
>gb|AC114489.2| Homo sapiens chromosome 1 clone RP11-114B7, complete sequence Length = 172876 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gccgccgcccggccagccgccc 255 |||||||||||||||||||||| Sbjct: 168614 gccgccgcccggccagccgccc 168593
>ref|NM_188543.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 325 ggcatgggcgccccgctcgccaccgtcgc 353 ||||||||||| ||||||||| ||||||| Sbjct: 238 ggcatgggcgcgccgctcgcctccgtcgc 266
>gb|AC123882.6| Mus musculus chromosome 1, clone RP23-447L15, complete sequence Length = 177559 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ccatcaaggtgaagctgcaga 223 ||||||||||||||||||||| Sbjct: 56653 ccatcaaggtgaagctgcaga 56673
>ref|XM_954413.1| Neurospora crassa OR74A hypothetical protein (NCU02451.1) partial mRNA Length = 711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 tcgccaccgtcgccgccttca 361 ||||||||||||||||||||| Sbjct: 206 tcgccaccgtcgccgccttca 226
>ref|XM_331226.1| Neurospora crassa OR74A hypothetical protein (NCU02451.1) partial mRNA Length = 711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 tcgccaccgtcgccgccttca 361 ||||||||||||||||||||| Sbjct: 206 tcgccaccgtcgccgccttca 226
>ref|NM_133975.4| Mus musculus thyroid hormone receptor interactor 12 (Trip12), mRNA Length = 9632 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ccatcaaggtgaagctgcaga 223 ||||||||||||||||||||| Sbjct: 7890 ccatcaaggtgaagctgcaga 7870
>emb|AL672220.6| Human DNA sequence from clone RP11-17C2 on chromosome 1 Contains a CpG island, complete sequence Length = 104417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 15126 ccgccgcccggccagccgccc 15106
>emb|AL391063.14| Human DNA sequence from clone RP5-836N10 on chromosome 1 Contains the 5' end of the gene for AD026 protein (AD026), a novel gene and a CpG island, complete sequence Length = 56943 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 55624 ccgccgcccggccagccgccc 55604
>emb|AL139012.14| Human DNA sequence from clone RP5-1091G18 on chromosome 1 Contains the 5' end of a novel gene, part of the RAP1A gene for RAP1A member of RAS oncogene family, a keratin 18 (KRT18) pseudogene and a CpG island, complete sequence Length = 43551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 681 ccgccgcccggccagccgccc 661
>emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chromosome 13 Contains a glyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH) pseudogene, 2 novel genes, a H2B histone family, member H (H2BFH)(H2B.h, H2B/h, dJ221C16.8) pseudogene, the 3' end of the EFHA1 gene for EF hand domain family, member A1 and three CpG islands, complete sequence Length = 167830 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 93742 ccgccgcccggccagccgccc 93762
>gb|AC040934.15| Homo sapiens chromosome 17, clone CTD-2026D20, complete sequence Length = 168194 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 72177 ccgccgcccggccagccgccc 72197
>gb|AC025919.8| Homo sapiens chromosome 15 clone RP11-947O24 map 15q21.1, complete sequence Length = 188439 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 129123 ccgccgcccggccagccgccc 129103
>gb|AC090954.3| Homo sapiens chromosome 3 clone RP11-616M11 map 3p, complete sequence Length = 168020 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 34178 ccgccgcccggccagccgccc 34198
>dbj|AK086724.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930048B22 product:inferred: expressed sequence AA410158, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ccatcaaggtgaagctgcaga 223 ||||||||||||||||||||| Sbjct: 1429 ccatcaaggtgaagctgcaga 1409
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 325 ggcatgggcgccccgctcgccaccgtcgc 353 ||||||||||| ||||||||| ||||||| Sbjct: 6880731 ggcatgggcgcgccgctcgcctccgtcgc 6880703
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 ggtgggcggggcggcgcagctggtc 183 ||||||||||||||||| ||||||| Sbjct: 2047280 ggtgggcggggcggcgctgctggtc 2047256 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgtcgccgccttcaacgccgtgct 371 |||||||||||||| ||||||||| Sbjct: 308827 cgtcgccgccttcagcgccgtgct 308850
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 325 ggcatgggcgccccgctcgccaccgtcgc 353 ||||||||||| ||||||||| ||||||| Sbjct: 48455 ggcatgggcgcgccgctcgcctccgtcgc 48427
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 325 ggcatgggcgccccgctcgccaccgtcgc 353 ||||||||||| ||||||||| ||||||| Sbjct: 2549 ggcatgggcgcgccgctcgcctccgtcgc 2521
>dbj|BS000215.2| Pan troglodytes chromosome 22 clone:RP43-183P07, map 22, complete sequences Length = 151501 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccgccgcccggccagccgccc 255 ||||||||||||||||||||| Sbjct: 106887 ccgccgcccggccagccgccc 106867
>emb|AJ243807.1|THA243807 Trichoderma harzianum p1 gene Length = 1528 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 gccaccgtcgccgccttcaac 363 ||||||||||||||||||||| Sbjct: 142 gccaccgtcgccgccttcaac 162
>gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromosome ul, complete sequence Length = 260878 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cgctccgagcccggcgccgcg 426 ||||||||||||||||||||| Sbjct: 169608 cgctccgagcccggcgccgcg 169588
>gb|DQ280500.1| Streptomyces olindensis DAUFPE 5622 cosmomycin gene cluster, partial sequence Length = 14080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ccctgctgcgctccgagcccg 418 ||||||||||||||||||||| Sbjct: 13844 ccctgctgcgctccgagcccg 13864
>gb|M80674.1|STMTCREP Streptomyces glaucescens tcm operon Length = 13123 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 cggcgccatggacgccgtcaa 284 ||||||||||||||||||||| Sbjct: 11632 cggcgccatggacgccgtcaa 11652
>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence Length = 23480 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aggctgttgagctgttcatg 26 |||||||||||||||||||| Sbjct: 12239 aggctgttgagctgttcatg 12220
>gb|L78833.1| Homo sapiens BRCA1 (BRCA1) gene, complete cds; ribosomal protein L21-like protein (rpL21) pseudogene, complete sequence; Rho7 (Rho7) and VatI (VatI) genes, complete cds; and unknown (ifp35) gene, exons 1 through 3 and partial cds Length = 117143 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 106582 caaggtgaagctgcagagcc 106601
>gb|BT016289.1| Zea mays clone Contig122 mRNA sequence Length = 948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cgccatggacgccgtcaagc 286 |||||||||||||||||||| Sbjct: 484 cgccatggacgccgtcaagc 503
>gb|DQ150524.1| Macaca mulatta vesicle amine transport protein 1 (VAT1) gene, partial cds Length = 1703 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 204 caaggtgaagctgcagagcc 223
>gb|DQ150519.1| Gorilla gorilla vesicle amine transport protein 1 (VAT1) gene, partial cds Length = 1682 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 183 caaggtgaagctgcagagcc 202
>gb|DQ150518.1| Pan paniscus vesicle amine transport protein 1 (VAT1) gene, partial cds Length = 1620 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 173 caaggtgaagctgcagagcc 192
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgccgccgcccggccagccg 252 |||||||||||||||||||| Sbjct: 679835 cgccgccgcccggccagccg 679816
>gb|AC131998.9| Mus musculus chromosome 1, clone RP24-164G9, complete sequence Length = 152462 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aggtgaagctgcagagccag 228 |||||||||||||||||||| Sbjct: 25835 aggtgaagctgcagagccag 25854
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcagctggtcgtgggccacc 193 |||||||||||||||||||| Sbjct: 3132019 gcagctggtcgtgggccacc 3132000
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgccgccgcccggccagccg 252 |||||||||||||||||||| Sbjct: 935598 cgccgccgcccggccagccg 935617
>gb|BC008725.2| Homo sapiens vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:3015 IMAGE:3162543), complete cds Length = 2718 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 224 caaggtgaagctgcagagcc 243
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgccgccgcccggccagccg 252 |||||||||||||||||||| Sbjct: 3095223 cgccgccgcccggccagccg 3095242
>gb|AC135669.5| Mus musculus BAC clone RP23-360L22 from chromosome 10, complete sequence Length = 194398 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aaatcagcaaagcaaagcat 69 |||||||||||||||||||| Sbjct: 133993 aaatcagcaaagcaaagcat 134012
>ref|NM_006373.2| Homo sapiens vesicle amine transport protein 1 homolog (T californica) (VAT1), mRNA Length = 2738 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 236 caaggtgaagctgcagagcc 255
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aggctgttgagctgttcatg 26 |||||||||||||||||||| Sbjct: 7468136 aggctgttgagctgttcatg 7468117 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccggcgccatggacgccg 280 |||||||||||||||||||| Sbjct: 2848635 cgccggcgccatggacgccg 2848654
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcagctggtcgtgggccacc 193 |||||||||||||||||||| Sbjct: 276876 gcagctggtcgtgggccacc 276857
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aggctgttgagctgttcatg 26 |||||||||||||||||||| Sbjct: 106691 aggctgttgagctgttcatg 106672
>ref|XM_548076.2| PREDICTED: Canis familiaris similar to vesicle amine transport protein 1 (LOC490953), mRNA Length = 2443 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 236 caaggtgaagctgcagagcc 255
>gb|AC092690.2| Caenorhabditis elegans cosmid BE0003N10, complete sequence Length = 28863 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gccgccgcccggccagccgc 253 |||||||||||||||||||| Sbjct: 22898 gccgccgcccggccagccgc 22917
>gb|BC068489.1| Homo sapiens cDNA clone IMAGE:5299207, containing frame-shift errors Length = 2699 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 227 caaggtgaagctgcagagcc 246
>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a novel pseudogene, complete sequence Length = 163869 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtgaagctgcagagccag 228 |||||||||||||||||||| Sbjct: 36367 aggtgaagctgcagagccag 36348
>emb|AL353804.22| Human DNA sequence from clone RP13-216E22 on chromosome Xq13.1-21.1 Note the TSIX gene (see AmJHumGenet 69, 951) is known to overlap the XIST locus however this transcript has not been submitted to the databases and therefore it is not possible at this stage to annotate the locus, complete sequence Length = 167668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccgcccggccagccgcccaa 257 |||||||||||||||||||| Sbjct: 65925 ccgcccggccagccgcccaa 65944
>gb|AY325139.1| Rattus norvegicus Ab1-114 mRNA, complete cds Length = 1063 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 196 ttcgacaccatcaaggtgaagctgcaga 223 ||||||||||| ||||||||| |||||| Sbjct: 128 ttcgacaccatgaaggtgaagatgcaga 155
>gb|BC001913.1| Homo sapiens vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:3547155), partial cds Length = 2655 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 169 caaggtgaagctgcagagcc 188
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcagctggtcgtgggccacc 193 |||||||||||||||||||| Sbjct: 18768 gcagctggtcgtgggccacc 18749
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 cgcccaagttcgccggcgccatggacgc 278 |||||||||||||| ||||||| ||||| Sbjct: 46514 cgcccaagttcgccagcgccatcgacgc 46541
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 399 cctgctgcgctccgagcccggcgccgcg 426 |||||||||| ||| ||||||||||||| Sbjct: 263941 cctgctgcgcgccgcgcccggcgccgcg 263968
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 251 cgcccaagttcgccggcgccatggacgc 278 |||||||||||||| ||||||| ||||| Sbjct: 191132 cgcccaagttcgccagcgccatcgacgc 191105
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 399 cctgctgcgctccgagcccggcgccgcg 426 |||||||||| ||| ||||||||||||| Sbjct: 268364 cctgctgcgcgccgcgcccggcgccgcg 268391
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 251 cgcccaagttcgccggcgccatggacgc 278 |||||||||||||| ||||||| ||||| Sbjct: 213426 cgcccaagttcgccagcgccatcgacgc 213399
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgccgccgcccggccagccg 252 |||||||||||||||||||| Sbjct: 2825301 cgccgccgcccggccagccg 2825320
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gctggtcgtgggccacccgt 196 |||||||||||||||||||| Sbjct: 33599 gctggtcgtgggccacccgt 33618
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ccgccggcacggtgggcggggcgg 172 |||||||| ||||||||||||||| Sbjct: 102975 ccgccggcgcggtgggcggggcgg 102998
>gb|BT008170.1| Synthetic construct Homo sapiens vesicle amine transport protein 1 homolog (T californica) mRNA, partial cds Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 180 caaggtgaagctgcagagcc 199
>gb|BT007369.1| Homo sapiens vesicle amine transport protein 1 homolog (T californica) mRNA, complete cds Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 180 caaggtgaagctgcagagcc 199
>gb|BC014279.2| Homo sapiens vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:11123 IMAGE:3834206), complete cds Length = 2692 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 206 caaggtgaagctgcagagcc 225
>gb|AC025469.6| Homo sapiens chromosome 5 clone CTD-2380K1, complete sequence Length = 109745 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccgcccggccagccgcccaa 257 |||||||||||||||||||| Sbjct: 70157 ccgcccggccagccgcccaa 70176
>emb|CR622345.1| full-length cDNA clone CS0DK001YO20 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1602 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 219 caaggtgaagctgcagagcc 238
>emb|CR613076.1| full-length cDNA clone CS0DL003YG03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1624 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 246 caaggtgaagctgcagagcc 265
>gb|AC093902.3| Homo sapiens BAC clone RP11-732B24 from 4, complete sequence Length = 179591 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tgttgtgtcttatctccact 44 |||||||||||||||||||| Sbjct: 92759 tgttgtgtcttatctccact 92778
>gb|AC015729.10| Homo sapiens, clone RP11-1A20, complete sequence Length = 153392 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 acttaaacaaatcagcaaagcaaa 65 |||||||||||||| ||||||||| Sbjct: 131472 acttaaacaaatcaacaaagcaaa 131449
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaacaaatcagcaaagcaaa 65 |||||||||||||||||||| Sbjct: 111384 aaacaaatcagcaaagcaaa 111365
>gb|AC157924.6| Mus musculus chromosome 1, clone RP23-18J18, complete sequence Length = 206156 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtgaagctgcagagccag 228 |||||||||||||||||||| Sbjct: 77248 aggtgaagctgcagagccag 77229
>gb|AC009753.5|AC009753 Homo sapiens chromosome 15 clone RP11-416K5 map 15q21.1, complete sequence Length = 158405 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cgccgccgcccggccagccgccca 256 |||| ||||||||||||||||||| Sbjct: 65405 cgcctccgcccggccagccgccca 65428
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgccaccgtcgccgccttc 360 |||||||||||||||||||| Sbjct: 8448931 tcgccaccgtcgccgccttc 8448950
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 caaatcagcaaagcaaagca 68 |||||||||||||||||||| Sbjct: 17774411 caaatcagcaaagcaaagca 17774430 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cacggtgggcggggcggcgc 175 |||||||||||||||||||| Sbjct: 7942292 cacggtgggcggggcggcgc 7942311
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aggctgttgagctgttcatg 26 |||||||||||||||||||| Sbjct: 7465971 aggctgttgagctgttcatg 7465952 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccggcgccatggacgccg 280 |||||||||||||||||||| Sbjct: 2848746 cgccggcgccatggacgccg 2848765
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgccgccgcccggccagccg 252 |||||||||||||||||||| Sbjct: 29387184 cgccgccgcccggccagccg 29387165
>emb|BX929323.1| Gallus gallus finished cDNA, clone ChEST183f6 Length = 1154 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 406 cgctccgagcccggcgccgcgctc 429 ||||||| |||||||||||||||| Sbjct: 71 cgctccgggcccggcgccgcgctc 48
>ref|XM_224969.3| PREDICTED: Rattus norvegicus solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 (predicted) (Slc25a15_predicted), mRNA Length = 1745 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 196 ttcgacaccatcaaggtgaagctgcaga 223 ||||||||||| ||||||||| |||||| Sbjct: 128 ttcgacaccatgaaggtgaagatgcaga 155
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgctcgccaccgtcgccgcc 357 |||||||||||||||||||| Sbjct: 2739506 cgctcgccaccgtcgccgcc 2739525
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ccccgctcgccaccgtcgcc 354 |||||||||||||||||||| Sbjct: 2501189 ccccgctcgccaccgtcgcc 2501208
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccggcgccatggacgccg 280 |||||||||||||||||||| Sbjct: 120591 cgccggcgccatggacgccg 120610
>gb|AC135721.4| Homo sapiens, clone CTD-3199J23, complete sequence Length = 150472 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 137277 caaggtgaagctgcagagcc 137296
>gb|AC106731.3| Homo sapiens chromosome 5 clone CTD-2216D16, complete sequence Length = 132722 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ggacagatggaggccctgct 404 |||||||||||||||||||| Sbjct: 51660 ggacagatggaggccctgct 51641
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ggcggcgcagctggtcgtgggcca 191 ||||||| |||||||||||||||| Sbjct: 1194981 ggcggcggagctggtcgtgggcca 1194958
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgccgccgcccggccagccg 252 |||||||||||||||||||| Sbjct: 38056 cgccgccgcccggccagccg 38037
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cacggtgggcggggcggcgc 175 |||||||||||||||||||| Sbjct: 54935 cacggtgggcggggcggcgc 54954
>gb|AC153847.7| Mus musculus 10 BAC RP23-286J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187753 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aaatcagcaaagcaaagcat 69 |||||||||||||||||||| Sbjct: 1255 aaatcagcaaagcaaagcat 1274
>gb|AY892818.1| Synthetic construct Homo sapiens clone FLH013447.01L vesicle amine transport protein 1-like (VAT1) mRNA, partial cds Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 180 caaggtgaagctgcagagcc 199
>gb|AY890347.1| Synthetic construct Homo sapiens clone FLH013451.01X vesicle amine transport protein 1-like (VAT1) mRNA, complete cds Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 180 caaggtgaagctgcagagcc 199
>gb|AY890346.1| Synthetic construct Homo sapiens clone FLH013450.01X vesicle amine transport protein 1-like (VAT1) mRNA, complete cds Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 180 caaggtgaagctgcagagcc 199
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 caaatcagcaaagcaaagca 68 |||||||||||||||||||| Sbjct: 15055 caaatcagcaaagcaaagca 15074
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 caaatcagcaaagcaaagca 68 |||||||||||||||||||| Sbjct: 83045 caaatcagcaaagcaaagca 83064
>gb|BC090858.1| Homo sapiens vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:102756 IMAGE:6528247), complete cds Length = 2710 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 238 caaggtgaagctgcagagcc 257
>dbj|AK102357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H19, full insert sequence Length = 1401 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 cgccggcgccatggacgccg 280 |||||||||||||||||||| Sbjct: 821 cgccggcgccatggacgccg 802
>gb|BC015041.2| Homo sapiens vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:9483 IMAGE:3919901), complete cds Length = 2741 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 caaggtgaagctgcagagcc 226 |||||||||||||||||||| Sbjct: 238 caaggtgaagctgcagagcc 257
>emb|BX908391.12| Zebrafish DNA sequence from clone CH211-151H10 in linkage group 18, complete sequence Length = 151841 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gccgaggggccccggggcct 317 |||||||||||||||||||| Sbjct: 75741 gccgaggggccccggggcct 75760
>gb|AC107869.15| Mus musculus chromosome 1, clone RP23-418L6, complete sequence Length = 182061 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggtgaagctgcagagccag 228 |||||||||||||||||||| Sbjct: 96600 aggtgaagctgcagagccag 96581
>gb|AY108629.1| Zea mays PCO100591 mRNA sequence Length = 578 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cgccatggacgccgtcaagc 286 |||||||||||||||||||| Sbjct: 100 cgccatggacgccgtcaagc 119
>emb|CR847537.9| Zebrafish DNA sequence from clone DKEYP-79B2 in linkage group 3, complete sequence Length = 144825 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaacaaatcagcaaagcaaa 65 |||||||||||||||||||| Sbjct: 117702 aaacaaatcagcaaagcaaa 117683
>emb|AL358336.4|CNS05TE7 Human chromosome 14 DNA sequence BAC R-514D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177669 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 acttaaacaaatcagcaaagcaaa 65 |||||||||||||| ||||||||| Sbjct: 83831 acttaaacaaatcaacaaagcaaa 83808
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaacaaatcagcaaagcaaa 65 |||||||||||||||||||| Sbjct: 107848 aaacaaatcagcaaagcaaa 107829
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgccaccgtcgccgccttc 360 |||||||||||||||||||| Sbjct: 8448814 tcgccaccgtcgccgccttc 8448833
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgccaccgtcgccgccttc 360 |||||||||||||||||||| Sbjct: 55594 tcgccaccgtcgccgccttc 55613
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ggcggcgcagctggtcgtgggcca 191 ||||||| |||||||||||||||| Sbjct: 869891 ggcggcggagctggtcgtgggcca 869868
>gb|AC004657.1|AC004657 Drosophila melanogaster DNA sequence (P1s DS08204 (D183) and DS09119 (D236)), complete sequence Length = 76618 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaacaaatcagcaaagcaaa 65 |||||||||||||||||||| Sbjct: 56904 aaacaaatcagcaaagcaaa 56885
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccacgccgccgcccggccag 249 |||||||||||||||||||| Sbjct: 2813300 ccacgccgccgcccggccag 2813281
>gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from clone y414a Length = 40121 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gcagctggtcgtgggccacc 193 |||||||||||||||||||| Sbjct: 11238 gcagctggtcgtgggccacc 11257
>emb|AL669924.9| Human DNA sequence from clone XXbac-2L19 on chromosome 6, complete sequence Length = 137345 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ggacagatggaggccctgct 404 |||||||||||||||||||| Sbjct: 117881 ggacagatggaggccctgct 117862 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,593,021 Number of Sequences: 3902068 Number of extensions: 3593021 Number of successful extensions: 114282 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111657 Number of HSP's gapped (non-prelim): 2621 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)