>COX10_YARLI (Q6C0L2) Protoheme IX farnesyltransferase, mitochondrial precursor|
           (EC 2.5.1.-) (Heme O synthase)
          Length = 471

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
 Frame = -2

Query: 463 PGLGCGRSLRNTTRALLMMYVCTPVMSSTLCISDTRITSWY-----DDLRIWMAWWS-RW 302
           PGL     LR    ALLM  +C         +S   +T W+       L  WMAWW+ ++
Sbjct: 356 PGLNARVGLRY---ALLMFPLCVG-------LSYYNVTDWWFVLDSSVLNAWMAWWAFKF 405

Query: 301 WARQSEQSAPPMQSRQY 251
           W +++   A     +QY
Sbjct: 406 WQQENVNIALAAAGKQY 422

>DVL3_MOUSE (Q61062) Segment polarity protein dishevelled homolog DVL-3|
           (Dishevelled-3) (DSH homolog 3)
          Length = 716

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 350 RDPGVGDTEGAGHHRRADVHHQQRARGVPQRAPAAEAGQGSHQH 481
           +DP  GD++  G    +D   +   RG  +RAP+  +G  + +H
Sbjct: 589 KDPKAGDSKSGGSGSESDHTTRSSLRGPRERAPSERSGPAASEH 632

>DVL3_HUMAN (Q92997) Segment polarity protein dishevelled homolog DVL-3|
           (Dishevelled-3) (DSH homolog 3)
          Length = 716

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 350 RDPGVGDTEGAGHHRRADVHHQQRARGVPQRAPAAEAGQGSHQH 481
           +DP  GD++  G    +D   +   RG  +RAP+  +G  + +H
Sbjct: 589 KDPKAGDSKSGGSGSESDHTTRSSLRGPRERAPSERSGPAASEH 632

>SGO1_EMENI (Q5BDI1) Shugoshin|
          Length = 479

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
 Frame = +3

Query: 294 LAHHRDHHAIQIRRSSYHDVIRVSEIQRVLDITGVQTYIINSARVVFL------------ 437
           L+   DH  ++++  S   +  V   +RVL+     T I++ A+   +            
Sbjct: 322 LSSQNDHSPVKMKPQSERSIAHVHGERRVLEPKSTNTNILSPAKPSIMKDYNQNHDFGYN 381

Query: 438 --NERPQPRPGKGVTN 479
             +E+P PR GKG  +
Sbjct: 382 EKSEKPLPRQGKGAVD 397

>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -3

Query: 99  REGMRGLLPSSAGERRGMWMQDGRGGKKC 13
           REG RG      G  RG W Q GRGG  C
Sbjct: 51  REGARG-----GGRGRGRWKQAGRGGGVC 74

>RCEL_RHOSH (P0C0Y8) Reaction center protein L chain (Photosynthetic reaction|
           center L subunit)
          Length = 281

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -2

Query: 391 VMSSTLCISDTRITSWYDDLRIWMAWWSR--WWA 296
           V  S LC+  T  T W+D    W  WW +  WWA
Sbjct: 241 VFFSALCMIITG-TIWFDQWVDWWQWWVKLPWWA 273

>RCEL_RHOS4 (Q3J1A5) Reaction center protein L chain (Photosynthetic reaction|
           center L subunit)
          Length = 281

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -2

Query: 391 VMSSTLCISDTRITSWYDDLRIWMAWWSR--WWA 296
           V  S LC+  T  T W+D    W  WW +  WWA
Sbjct: 241 VFFSALCMIITG-TIWFDQWVDWWQWWVKLPWWA 273

>Y258_BACTN (Q8AB53) Putative glucosamine-6-phosphate deaminase-like protein|
           BT_0258
          Length = 663

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = -2

Query: 403 VCTPVMSSTLCISDTRITSWYDDLRIWM--AWWSRWWARQSEQSAP 272
           VCT  + + + +       W  D RIWM    W+ W     E + P
Sbjct: 550 VCTDAVFAAVDLEKEEGAKWLKDCRIWMYRGAWAEWEIENIEMAVP 595


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,650,349
Number of Sequences: 219361
Number of extensions: 1154866
Number of successful extensions: 4572
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4570
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)