No.
Definition
Score (bits)
E Value
1 gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome...
365
1e-97
2 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
365
1e-97
3 dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon...
343
4e-91
4 dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon...
192
8e-46
5 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
84
5e-13
6 dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D...
84
5e-13
7 dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D...
84
5e-13
8 ref|XM_512475.1| PREDICTED: Pan troglodytes similar to myosin IX...
44
0.46
9 ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA
44
0.46
10 gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, com...
44
0.46
11 gb|AC092476.1|AC092476 Homo sapiens chromosome 19 clone LLNLR-23...
44
0.46
12 dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, par...
44
0.46
13 gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds
44
0.46
14 ref|XM_540131.2| PREDICTED: Canis familiaris similar to Hypothet...
42
1.8
15 gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
42
1.8
16 dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
42
1.8
17 ref|XM_481921.1| Oryza sativa (japonica cultivar-group), mRNA
40
7.2
18 gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
40
7.2
19 gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
40
7.2
20 ref|XM_844545.1| PREDICTED: Canis familiaris similar to growth f...
40
7.2
21 emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...
40
7.2
22 emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chrom...
40
7.2
23 emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome...
40
7.2
24 emb|CR390901.1| Gallus gallus finished cDNA, clone ChEST399n18
40
7.2
25 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.2
26 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.2
27 gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
40
7.2
28 dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D...
40
7.2
29 dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D...
40
7.2
30 dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic D...
40
7.2
31 gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete...
40
7.2
32 gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipie...
40
7.2
33 gb|U18777.1|MAU18777 Mycobacterium avium plasmid pLR7 Rep gene, ...
40
7.2
>gb|AC120991.3 | Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0006J12, complete sequence
Length = 157069
Score = 365 bits (184), Expect = 1e-97
Identities = 358/416 (86%)
Strand = Plus / Plus
Query: 115 cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 174
||||||| ||||||||||||| |||||| ||| ||| ||||||| ||||| |||||
Sbjct: 88573 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 88632
Query: 175 gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 234
|||||| ||||| |||| || ||| ||||||||| ||||| | |||||| |||| ||
Sbjct: 88633 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 88692
Query: 235 ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 294
|||||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||||||
Sbjct: 88693 ggtggactgcgaggccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 88752
Query: 295 gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccgtcccc 354
|| |||||||||||| |||| || |||||||||||||||| |||| |||||| ||
Sbjct: 88753 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 88812
Query: 355 ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 414
|| || || ||||||||||| ||||||||||||||||||| ||||||| |||||||||
Sbjct: 88813 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 88872
Query: 415 cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggg 474
| |||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 88873 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcccggccccggg 88932
Query: 475 gccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccg 530
|||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 88933 gccgctcgccaccgcgccggcgttcctgttcacatgcggcgccacgttcctgaccg 88988
Score = 266 bits (134), Expect = 7e-68
Identities = 332/398 (83%)
Strand = Plus / Plus
Query: 110 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
||||| |||||||||||||||||||| |||||| ||| ||| ||||||| |||||
Sbjct: 91061 ccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtg 91120
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
||||||||||| ||||| ||||| || |||| ||||||||| ||||| | |||||| ||
Sbjct: 91121 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacg 91180
Query: 230 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcg 289
||||||||||||||||| ||||||||||||| |||||||||||| | || ||||||| |
Sbjct: 91181 ctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcggg 91240
Query: 290 tccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccg 349
||||||| |||||||||| | |||| | | |||| || ||||||| ||||| |||
Sbjct: 91241 tccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgcca 91300
Query: 350 tccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtc 409
||||||| || || |||| |||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 91301 tccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtc 91360
Query: 410 agcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcg 469
| | ||||| ||| |||||||||||||||| ||| ||||||||||||||||| | |||
Sbjct: 91361 acggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgcaccgcg 91420
Query: 470 ccggggccgctcgccaccgcgccggcgtttctgttcac 507
||||||||| ||||||||| ||||| ||| |||||||
Sbjct: 91421 ccggggccgttcgccaccgtgccggagttcttgttcac 91458
Score = 232 bits (117), Expect = 9e-58
Identities = 345/421 (81%)
Strand = Plus / Plus
Query: 109 cccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacggg 168
||||||||||||| ||||||||||| |||||| |||||||| ||||||| |||||
Sbjct: 95445 cccgagcgccgtgctgctgccggtggacaaggacggcgcaacgcagcagtacgtgacgat 95504
Query: 169 cttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctc 228
||| ||||||| ||||| || || |||| ||||||| | ||||| | ||||||
Sbjct: 95505 gttctggcagcggacgccgagtgtgcccgtgaaggccgtggttgacctcgcgggcgccat 95564
Query: 229 gctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgc 288
|||||||||||||||||| ||||||||| ||| ||||| || ||| ||||||||||||
Sbjct: 95565 gctctgggtggactgcgagtccgggtacgagtcgtcgtcgtatgcgcgcgtgccgtgcgg 95624
Query: 289 gtccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagcc 348
|||||||| ||||||||||||||||| | ||||| |||||| ||||| ||| | |
Sbjct: 95625 gtccaagccttgccgcctcgcgaagagcgccgcctgtgccaccggctgctccggtgcggc 95684
Query: 349 gtccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgt 408
||||||||| || || ||||||||||| | ||||||||||||| |||| ||||||||||
Sbjct: 95685 gtccccgggctgcctcaacgacacctgcaccgggttcccggagtacactatcacgcgcgt 95744
Query: 409 cagcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggc 468
|||||||||||| ||| ||||||| ||| ||||||| || |||||||| ||||||
Sbjct: 95745 cagcaccggcggcaacatcatcacagacaagctgtcgctgtacaccacctgccgccccat 95804
Query: 469 gccggggccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgac 528
||||| |||| |||||||||||||| |||||||||||| ||||| || |||| ||||||
Sbjct: 95805 gccggttccgcgcgccaccgcgccggggtttctgttcacctgcggtgcaacgtccctgac 95864
Query: 529 c 529
|
Sbjct: 95865 c 95865
Score = 192 bits (97), Expect = 8e-46
Identities = 136/149 (91%)
Strand = Plus / Plus
Query: 365 aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 424
||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| |||
Sbjct: 102703 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 102762
Query: 425 ctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggggccgctcgcc 484
|||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 102763 atcatcaccgacgtgctgtcgctgcccaccaccttccgccccgcgccggggccgctcgcc 102822
Query: 485 accgcgccggcgtttctgttcacgtgcgg 513
|||||||||||||| ||||||| |||||
Sbjct: 102823 accgcgccggcgttcttgttcacctgcgg 102851
Score = 147 bits (74), Expect = 4e-32
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 110 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
|||||| ||||||||||||||||||| |||||| ||| ||| ||||||| |||||
Sbjct: 102448 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 102507
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
||||||||||| ||||| ||||| || |||| ||||||||| ||||| | ||| || |
Sbjct: 102508 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 102567
Query: 230 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 287
|||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 102568 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 102625
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 365 bits (184), Expect = 1e-97
Identities = 358/416 (86%)
Strand = Plus / Plus
Query: 115 cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 174
||||||| ||||||||||||| |||||| ||| ||| ||||||| ||||| |||||
Sbjct: 19487861 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 19487920
Query: 175 gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 234
|||||| ||||| |||| || ||| ||||||||| ||||| | |||||| |||| ||
Sbjct: 19487921 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 19487980
Query: 235 ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 294
|||||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||||||
Sbjct: 19487981 ggtggactgcgaggccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 19488040
Query: 295 gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccgtcccc 354
|| |||||||||||| |||| || |||||||||||||||| |||| |||||| ||
Sbjct: 19488041 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 19488100
Query: 355 ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 414
|| || || ||||||||||| ||||||||||||||||||| ||||||| |||||||||
Sbjct: 19488101 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 19488160
Query: 415 cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggg 474
| |||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 19488161 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcccggccccggg 19488220
Query: 475 gccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccg 530
|||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 19488221 gccgctcgccaccgcgccggcgttcctgttcacatgcggcgccacgttcctgaccg 19488276
Score = 266 bits (134), Expect = 7e-68
Identities = 332/398 (83%)
Strand = Plus / Plus
Query: 110 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
||||| |||||||||||||||||||| |||||| ||| ||| ||||||| |||||
Sbjct: 19490349 ccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtg 19490408
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
||||||||||| ||||| ||||| || |||| ||||||||| ||||| | |||||| ||
Sbjct: 19490409 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacg 19490468
Query: 230 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcg 289
||||||||||||||||| ||||||||||||| |||||||||||| | || ||||||| |
Sbjct: 19490469 ctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcggg 19490528
Query: 290 tccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccg 349
||||||| |||||||||| | |||| | | |||| || ||||||| ||||| |||
Sbjct: 19490529 tccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgcca 19490588
Query: 350 tccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtc 409
||||||| || || |||| |||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 19490589 tccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtc 19490648
Query: 410 agcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcg 469
| | ||||| ||| |||||||||||||||| ||| ||||||||||||||||| | |||
Sbjct: 19490649 acggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgcaccgcg 19490708
Query: 470 ccggggccgctcgccaccgcgccggcgtttctgttcac 507
||||||||| ||||||||| ||||| ||| |||||||
Sbjct: 19490709 ccggggccgttcgccaccgtgccggagttcttgttcac 19490746
Score = 232 bits (117), Expect = 9e-58
Identities = 345/421 (81%)
Strand = Plus / Plus
Query: 109 cccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacggg 168
||||||||||||| ||||||||||| |||||| |||||||| ||||||| |||||
Sbjct: 19494733 cccgagcgccgtgctgctgccggtggacaaggacggcgcaacgcagcagtacgtgacgat 19494792
Query: 169 cttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctc 228
||| ||||||| ||||| || || |||| ||||||| | ||||| | ||||||
Sbjct: 19494793 gttctggcagcggacgccgagtgtgcccgtgaaggccgtggttgacctcgcgggcgccat 19494852
Query: 229 gctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgc 288
|||||||||||||||||| ||||||||| ||| ||||| || ||| ||||||||||||
Sbjct: 19494853 gctctgggtggactgcgagtccgggtacgagtcgtcgtcgtatgcgcgcgtgccgtgcgg 19494912
Query: 289 gtccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagcc 348
|||||||| ||||||||||||||||| | ||||| |||||| ||||| ||| | |
Sbjct: 19494913 gtccaagccttgccgcctcgcgaagagcgccgcctgtgccaccggctgctccggtgcggc 19494972
Query: 349 gtccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgt 408
||||||||| || || ||||||||||| | ||||||||||||| |||| ||||||||||
Sbjct: 19494973 gtccccgggctgcctcaacgacacctgcaccgggttcccggagtacactatcacgcgcgt 19495032
Query: 409 cagcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggc 468
|||||||||||| ||| ||||||| ||| ||||||| || |||||||| ||||||
Sbjct: 19495033 cagcaccggcggcaacatcatcacagacaagctgtcgctgtacaccacctgccgccccat 19495092
Query: 469 gccggggccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgac 528
||||| |||| |||||||||||||| |||||||||||| ||||| || |||| ||||||
Sbjct: 19495093 gccggttccgcgcgccaccgcgccggggtttctgttcacctgcggtgcaacgtccctgac 19495152
Query: 529 c 529
|
Sbjct: 19495153 c 19495153
Score = 192 bits (97), Expect = 8e-46
Identities = 136/149 (91%)
Strand = Plus / Plus
Query: 365 aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 424
||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| |||
Sbjct: 19501991 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 19502050
Query: 425 ctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggggccgctcgcc 484
|||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 19502051 atcatcaccgacgtgctgtcgctgcccaccaccttccgccccgcgccggggccgctcgcc 19502110
Query: 485 accgcgccggcgtttctgttcacgtgcgg 513
|||||||||||||| ||||||| |||||
Sbjct: 19502111 accgcgccggcgttcttgttcacctgcgg 19502139
Score = 147 bits (74), Expect = 4e-32
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 110 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 169
|||||| ||||||||||||||||||| |||||| ||| ||| ||||||| |||||
Sbjct: 19501736 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 19501795
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 229
||||||||||| ||||| ||||| || |||| ||||||||| ||||| | ||| || |
Sbjct: 19501796 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 19501855
Query: 230 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 287
|||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 19501856 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 19501913
>dbj|AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 83.8 bits (42), Expect = 5e-13
Identities = 92/110 (83%), Gaps = 9/110 (8%)
Strand = Plus / Plus
Query: 429 tcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccgg---------ggccgc 479
||||||||||||||||| ||||||||||||||| | |||| |||| ||||||
Sbjct: 15505234 tcaccgacgtgctgtcgctgcccaccaccttcccctcggccccggtccggcaagggccgc 15505293
Query: 480 tcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgacc 529
||||||||||||||||||| |||||||| ||||| |||||| |||||||
Sbjct: 15505294 tcgccaccgcgccggcgttcctgttcacctgcgggcccacgtccctgacc 15505343
Score = 61.9 bits (31), Expect = 2e-06
Identities = 119/148 (80%), Gaps = 9/148 (6%)
Strand = Plus / Plus
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 226
|||| |||||||||||| | ||| |||||| ||||||| | ||||| || ||||||
Sbjct: 15504957 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 15505016
Query: 227 tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 280
||||||||||||||||||| ||||||||||| ||| || || ||||| ||||||
Sbjct: 15505017 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 15505076
Query: 281 ccgtgcgcgtccaagctgtgccgcctcg 308
|| |||| |||||||| ||||||||||
Sbjct: 15505077 ccatgcgggtccaagccctgccgcctcg 15505104
>dbj|AP005886.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0689B09
Length = 144932
Score = 83.8 bits (42), Expect = 5e-13
Identities = 92/110 (83%), Gaps = 9/110 (8%)
Strand = Plus / Plus
Query: 429 tcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccgg---------ggccgc 479
||||||||||||||||| ||||||||||||||| | |||| |||| ||||||
Sbjct: 26089 tcaccgacgtgctgtcgctgcccaccaccttcccctcggccccggtccggcaagggccgc 26148
Query: 480 tcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgacc 529
||||||||||||||||||| |||||||| ||||| |||||| |||||||
Sbjct: 26149 tcgccaccgcgccggcgttcctgttcacctgcgggcccacgtccctgacc 26198
Score = 61.9 bits (31), Expect = 2e-06
Identities = 119/148 (80%), Gaps = 9/148 (6%)
Strand = Plus / Plus
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 226
|||| |||||||||||| | ||| |||||| ||||||| | ||||| || ||||||
Sbjct: 25812 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 25871
Query: 227 tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 280
||||||||||||||||||| ||||||||||| ||| || || ||||| ||||||
Sbjct: 25872 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 25931
Query: 281 ccgtgcgcgtccaagctgtgccgcctcg 308
|| |||| |||||||| ||||||||||
Sbjct: 25932 ccatgcgggtccaagccctgccgcctcg 25959
>dbj|AP005568.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1299_A11
Length = 160099
Score = 83.8 bits (42), Expect = 5e-13
Identities = 92/110 (83%), Gaps = 9/110 (8%)
Strand = Plus / Plus
Query: 429 tcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccgg---------ggccgc 479
||||||||||||||||| ||||||||||||||| | |||| |||| ||||||
Sbjct: 154526 tcaccgacgtgctgtcgctgcccaccaccttcccctcggccccggtccggcaagggccgc 154585
Query: 480 tcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgacc 529
||||||||||||||||||| |||||||| ||||| |||||| |||||||
Sbjct: 154586 tcgccaccgcgccggcgttcctgttcacctgcgggcccacgtccctgacc 154635
Score = 61.9 bits (31), Expect = 2e-06
Identities = 119/148 (80%), Gaps = 9/148 (6%)
Strand = Plus / Plus
Query: 170 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 226
|||| |||||||||||| | ||| |||||| ||||||| | ||||| || ||||||
Sbjct: 154249 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 154308
Query: 227 tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 280
||||||||||||||||||| ||||||||||| ||| || || ||||| ||||||
Sbjct: 154309 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 154368
Query: 281 ccgtgcgcgtccaagctgtgccgcctcg 308
|| |||| |||||||| ||||||||||
Sbjct: 154369 ccatgcgggtccaagccctgccgcctcg 154396
>gb|U18777.1 |MAU18777 Mycobacterium avium plasmid pLR7 Rep gene, complete cds
Length = 1828
Score = 40.1 bits (20), Expect = 7.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 267 cctacgcgggcgtgccgtgc 286
||||||||||||||||||||
Sbjct: 288 cctacgcgggcgtgccgtgc 307
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,567,436
Number of Sequences: 3902068
Number of extensions: 2567436
Number of successful extensions: 52761
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51731
Number of HSP's gapped (non-prelim): 1022
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)