ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart26h07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 228 tcgtcgagccggccgtcgtcgcg 250 ||||||||||||||||||||||| Sbjct: 5993 tcgtcgagccggccgtcgtcgcg 6015
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 ccgccgccgctgaggaggcccc 486 |||||||||||||||||||||| Sbjct: 2309982 ccgccgccgctgaggaggcccc 2309961
>gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complete sequence Length = 118368 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 gaggtggcaacggctgaggctg 329 |||||||||||||||||||||| Sbjct: 41319 gaggtggcaacggctgaggctg 41340
>gb|AE010335.1| Methanopyrus kandleri AV19 section 34 of 157 of the complete genome Length = 12939 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcccgtcgaggaggctccggc 159 ||||||||||||||||||||| Sbjct: 9613 gcccgtcgaggaggctccggc 9593
>ref|XM_525966.1| PREDICTED: Pan troglodytes similar to Homeobox even-skipped homolog protein 2 (EVX-2) (LOC470585), mRNA Length = 2250 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 gccggccgccgccgctgaggaggcc 484 ||||||||||||||| ||||||||| Sbjct: 1950 gccggccgccgccgccgaggaggcc 1926
>ref|XM_415658.1| PREDICTED: Gallus gallus similar to Joined to JAZF1 (LOC417406), mRNA Length = 3066 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 gccgccgccgctgaggaggcc 484 ||||||||||||||||||||| Sbjct: 1025 gccgccgccgctgaggaggcc 1005
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 gaggctccggcgccggcggtggtgg 173 ||||| ||||||||||||||||||| Sbjct: 45216 gaggccccggcgccggcggtggtgg 45192
>ref|XM_957160.1| Neurospora crassa OR74A hypothetical protein (NCU06546.1) partial mRNA Length = 1662 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 ggccgccgccgctgaggaggc 483 ||||||||||||||||||||| Sbjct: 1317 ggccgccgccgctgaggaggc 1337
>ref|XM_326400.1| Neurospora crassa OR74A hypothetical protein (NCU06546.1) partial mRNA Length = 1662 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 ggccgccgccgctgaggaggc 483 ||||||||||||||||||||| Sbjct: 1317 ggccgccgccgctgaggaggc 1337
>gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 unknown polyketide biosynthetic gene cluster, partial sequence; and AHBA biosynthesis gene cluster, complete sequence Length = 55488 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 gtcgagccggccgtcgtcgcggtcg 254 |||||||| |||||||||||||||| Sbjct: 55403 gtcgagccagccgtcgtcgcggtcg 55379
>gb|AF506520.2| Streptomyces hygroscopicus AHBA gene cluster, partial sequence Length = 13513 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 gtcgagccggccgtcgtcgcggtcg 254 |||||||| |||||||||||||||| Sbjct: 2821 gtcgagccagccgtcgtcgcggtcg 2797
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 cggccgccgccgctgaggagg 482 ||||||||||||||||||||| Sbjct: 128106 cggccgccgccgctgaggagg 128086
>ref|XM_939705.1| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog protein 2 (EVX-2) (LOC650617), mRNA Length = 1611 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 gccggccgccgccgctgaggaggcc 484 ||||||||||||||| ||||||||| Sbjct: 1311 gccggccgccgccgccgaggaggcc 1287
>ref|XM_292968.5| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog protein 2 (EVX-2) (LOC344191), mRNA Length = 1611 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 gccggccgccgccgctgaggaggcc 484 ||||||||||||||| ||||||||| Sbjct: 1311 gccggccgccgccgccgaggaggcc 1287
>gb|AF346833.1|AF346833 Mentha x piperita menthofuran synthase mRNA, complete cds Length = 1773 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 gccgccgccgctgaggaggcc 484 ||||||||||||||||||||| Sbjct: 260 gccgccgccgctgaggaggcc 240
>emb|CR406204.1| Gallus gallus finished cDNA, clone ChEST848n23 Length = 1019 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 gccgccgccgctgaggaggcc 484 ||||||||||||||||||||| Sbjct: 41 gccgccgccgctgaggaggcc 21
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggccgtcgtcgttgtcgagg 206 ||||||||||||||||||||| Sbjct: 3069599 cggccgtcgtcgttgtcgagg 3069579 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 13705105 ggcgccggcggtggtggagg 13705086
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 gaggctccggcgccggcggtggtgg 173 ||||| ||||||||||||||||||| Sbjct: 4534749 gaggccccggcgccggcggtggtgg 4534725 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 14111699 ggcgccggcggtggtggagg 14111718
>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence Length = 175667 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 460 gccggccgccgccgctgaggaggcc 484 ||||||||||||||| ||||||||| Sbjct: 64396 gccggccgccgccgccgaggaggcc 64420
>emb|AJ329487.1|HSA329487 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GC22C Length = 656 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 gccggccgccgccgctgaggaggcc 484 ||||||||||||||| ||||||||| Sbjct: 66 gccggccgccgccgccgaggaggcc 42
>dbj|AK071729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110H11, full insert sequence Length = 754 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 gaggctccggcgccggcggtggtgg 173 ||||| ||||||||||||||||||| Sbjct: 237 gaggccccggcgccggcggtggtgg 261
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 cggccgtcgtcgttgtcgagg 206 ||||||||||||||||||||| Sbjct: 130674 cggccgtcgtcgttgtcgagg 130654
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggctgtcgagccggccgt 192 |||||||||||||||||||| Sbjct: 697849 gaggctgtcgagccggccgt 697868 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 gaggctgtcgagccggccgt 342 |||||||||||||||||||| Sbjct: 697849 gaggctgtcgagccggccgt 697868
>ref|XM_512387.1| PREDICTED: Pan troglodytes dedicator of cytokinesis 6 (LOC455723), mRNA Length = 9247 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 5646 ggaggctgtcgagccggccg 5627
>ref|XM_480150.1| Oryza sativa (japonica cultivar-group), mRNA Length = 345 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtcgtcgcggtcgaggaggc 261 |||||||||||||||||||| Sbjct: 315 gtcgtcgcggtcgaggaggc 334
>ref|NM_184794.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcgccggcggtggtggaggc 177 |||||||||||||||||||| Sbjct: 583 gcgccggcggtggtggaggc 602
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggccgtcgtcgcggtcg 254 |||||||||||||||||||| Sbjct: 114009 gccggccgtcgtcgcggtcg 114028
>ref|XM_471720.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2724 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 1017 ggcgccggcggtggtggagg 1036
>gb|BC082762.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:99699 IMAGE:6497026), complete cds Length = 3861 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 789 ggaggctgtcgagccggccg 770
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 59254 ggcgccggcggtggtggagg 59273
>gb|AY639929.1| Homo sapiens SRC-1 interacting protein mRNA, complete cds Length = 2580 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 474 ggaggctgtcgagccggccg 455
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgtcgagccggccgtcgtcg 248 |||||||||||||||||||| Sbjct: 1318468 cgtcgagccggccgtcgtcg 1318487
>ref|NM_015493.4| Homo sapiens ankyrin repeat domain 25 (ANKRD25), mRNA Length = 5177 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 798 ggaggctgtcgagccggccg 779
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gccggccgtgaccgagctgg 401 |||||||||||||||||||| Sbjct: 1510609 gccggccgtgaccgagctgg 1510590
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cgccatgcccgtcgaggagg 152 |||||||||||||||||||| Sbjct: 3868696 cgccatgcccgtcgaggagg 3868715
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gcgccggcggtggtggaggc 177 |||||||||||||||||||| Sbjct: 22106739 gcgccggcggtggtggaggc 22106720 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gccgccgccgctgaggaggc 483 |||||||||||||||||||| Sbjct: 9452839 gccgccgccgctgaggaggc 9452858
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gtcgagccggccgtcgtcgc 249 |||||||||||||||||||| Sbjct: 1982248 gtcgagccggccgtcgtcgc 1982267 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tgtcgagccggccgtcgtcg 197 |||||||||||||||||||| Sbjct: 1982247 tgtcgagccggccgtcgtcg 1982266
>gb|AC063922.23| Homo sapiens 3 BAC RP11-315A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97817 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 ggagaccaaggaggccgagacaga 450 |||| ||||||||||||||||||| Sbjct: 71295 ggaggccaaggaggccgagacaga 71318
>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin, strain DSM 5908 Length = 66669 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 agccggccgccgccgctgaggagg 482 |||||||||||||||| ||||||| Sbjct: 7520 agccggccgccgccgccgaggagg 7543
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 cgagccggccgtcgacacagtcga 309 |||||||||||||||||| ||||| Sbjct: 325938 cgagccggccgtcgacacggtcga 325915
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 cgagccggccgtcgacacagtcga 309 |||||||||||||||||| ||||| Sbjct: 321054 cgagccggccgtcgacacggtcga 321077
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtcgagccggccgttgtcg 347 |||||||||||||||||||| Sbjct: 223180 tgtcgagccggccgttgtcg 223199
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 accgtggcggtggaggtcgtcgagccgg 239 ||||||| |||||||||||| ||||||| Sbjct: 220363 accgtggaggtggaggtcgtggagccgg 220336
>emb|AJ319581.1|FRU319581 Fugu rubripes partial mRNA for cold-shock domain protein (fruYP1 gene) Length = 1238 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 cggagaccaaggaggccgagacag 449 ||||||||||||||||| |||||| Sbjct: 762 cggagaccaaggaggccaagacag 785
>emb|BX294128.19| Zebrafish DNA sequence from clone DKEYP-35F12 in linkage group 10, complete sequence Length = 160042 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ggcaacagtggagattgtcg 287 |||||||||||||||||||| Sbjct: 58755 ggcaacagtggagattgtcg 58774
>gb|AC009000.6| Homo sapiens chromosome 19 clone LLNLR-276C11, complete sequence Length = 37107 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 11966 ggaggctgtcgagccggccg 11947
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 acggctgaggctgtcgagccggcc 340 ||||| |||||||||||||||||| Sbjct: 130633 acggcggaggctgtcgagccggcc 130656
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtcgagccggccgttgtcg 347 |||||||||||||||||||| Sbjct: 5345007 tgtcgagccggccgttgtcg 5345026
>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome Length = 10886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cggccgtcgtcgcggtcgag 256 |||||||||||||||||||| Sbjct: 9660 cggccgtcgtcgcggtcgag 9641
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 461 ccggccgccgccgctgaggaggcc 484 |||||||||||||| ||||||||| Sbjct: 21144 ccggccgccgccgcggaggaggcc 21167
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gccgccgccgctgaggaggc 483 |||||||||||||||||||| Sbjct: 150239 gccgccgccgctgaggaggc 150258
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gccggccgtcgtcgcggtcg 254 |||||||||||||||||||| Sbjct: 2732538 gccggccgtcgtcgcggtcg 2732557 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 227 gtcgtcgagccggccgtcgtcgcggtcgagga 258 ||||||||||| | ||| |||||||||||||| Sbjct: 1315449 gtcgtcgagcccgtcgtggtcgcggtcgagga 1315418
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gtcgtcgcggtcgaggaggc 261 |||||||||||||||||||| Sbjct: 3111094 gtcgtcgcggtcgaggaggc 3111075
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gtcgagccggccgtcgtcgc 249 |||||||||||||||||||| Sbjct: 24494742 gtcgagccggccgtcgtcgc 24494761
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gcgccggcggtggtggaggc 177 |||||||||||||||||||| Sbjct: 22099768 gcgccggcggtggtggaggc 22099749 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gccgccgccgctgaggaggc 483 |||||||||||||||||||| Sbjct: 9450960 gccgccgccgctgaggaggc 9450979
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 ggtggtggaggctgtcgagccggc 189 ||||| |||||||||||||||||| Sbjct: 25434536 ggtgggggaggctgtcgagccggc 25434559
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcgccggcggtggtggaggc 177 |||||||||||||||||||| Sbjct: 41543 gcgccggcggtggtggaggc 41562
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcgccggcggtggtggaggc 177 |||||||||||||||||||| Sbjct: 118123 gcgccggcggtggtggaggc 118142
>dbj|AB040951.2| Homo sapiens mRNA for KIAA1518 protein, partial cds Length = 5156 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 787 ggaggctgtcgagccggccg 768
>gb|BC098312.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:119707 IMAGE:40012032), complete cds Length = 2740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 587 ggaggctgtcgagccggccg 568
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gtcgagccggccgtcgtcgc 249 |||||||||||||||||||| Sbjct: 106215 gtcgagccggccgtcgtcgc 106234
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 ggtggtggaggctgtcgagccggc 189 ||||| |||||||||||||||||| Sbjct: 90198 ggtgggggaggctgtcgagccggc 90221
>dbj|AK000011.1| Homo sapiens cDNA FLJ20004 fis, clone ADKA02391 Length = 1826 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 650 ggaggctgtcgagccggccg 631
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gtcgtcgcggtcgaggaggc 261 |||||||||||||||||||| Sbjct: 161817 gtcgtcgcggtcgaggaggc 161798
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1066_B03 Length = 115339 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gtcgtcgcggtcgaggaggc 261 |||||||||||||||||||| Sbjct: 70578 gtcgtcgcggtcgaggaggc 70559
>ref|XM_320740.2| Anopheles gambiae str. PEST ENSANGP00000020132 (ENSANGG00000017643), partial mRNA Length = 4839 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gtcgagccggccgtcgtcgc 249 |||||||||||||||||||| Sbjct: 4472 gtcgagccggccgtcgtcgc 4453
>gb|BC098286.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:119708 IMAGE:40012033), complete cds Length = 2740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 587 ggaggctgtcgagccggccg 568
>gb|BC098105.1| Homo sapiens ankyrin repeat domain 25, mRNA (cDNA clone MGC:119706 IMAGE:40012030), complete cds Length = 2740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggctgtcgagccggccg 191 |||||||||||||||||||| Sbjct: 587 ggaggctgtcgagccggccg 568
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ggccgtcgtcgcggtcgagg 257 |||||||||||||||||||| Sbjct: 1940186 ggccgtcgtcgcggtcgagg 1940205
>dbj|AK067128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098G17, full insert sequence Length = 2791 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 852 ggcgccggcggtggtggagg 871
>dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D08, full insert sequence Length = 1230 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 111 ggcgccggcggtggtggagg 130
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 cgtcgagccggccgtcgtcgcggt 252 ||||||||||| |||||||||||| Sbjct: 641084 cgtcgagccggacgtcgtcgcggt 641061
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gtcgagccggccgtcgtcgttgtc 202 |||||||||||||||| ||||||| Sbjct: 220109 gtcgagccggccgtcggcgttgtc 220132
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 99713 ggcgccggcggtggtggagg 99694
>dbj|AB018443.1| Oryza sativa (japonica cultivar-group) mRNA for nonphototrophic hypocotyl 1b, complete cds Length = 3134 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcgccggcggtggtggagg 176 |||||||||||||||||||| Sbjct: 1208 ggcgccggcggtggtggagg 1227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,357,647 Number of Sequences: 3902068 Number of extensions: 3357647 Number of successful extensions: 88173 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85620 Number of HSP's gapped (non-prelim): 2553 length of query: 498 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 476 effective length of database: 17,147,199,772 effective search space: 8162067091472 effective search space used: 8162067091472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
