ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart26h03 |
|---|---|
| Clone Library Name | barley_pub |
>ZUPT_COREF (Q8FTK0) Zinc transporter zupT| Length = 268 Score = 58.5 bits (140), Expect = 1e-08 Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 3/147 (2%) Frame = +3 Query: 141 HVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNA--- 311 +++ A +L+ GL+T +G ++ + +P + L GF+ G+ML +SF+++ A Sbjct: 5 NIIFAFSLTLFAGLATGVGGVIAVARKAPGERFLAGSLGFSVGVMLFVSFVEILPKAVEE 64 Query: 312 LNSIGFLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQV 491 L + + W + + VPT R ++ Sbjct: 65 LTGVWGERGGNWAATGAFFAGIALIAVID-RLVPT--AINPHEPSTVGGAVEGYERRSRM 121 Query: 492 LFSGIITAVGISLHNFPEGMAVFLGSV 572 + +G++TA+ IS+HNFPEG A F+ + Sbjct: 122 MRAGVLTAIAISIHNFPEGFATFVAGL 148
>ZUPT_STRMU (Q8DRY7) Zinc transporter zupT| Length = 264 Score = 56.6 bits (135), Expect = 5e-08 Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 3/151 (1%) Frame = +3 Query: 132 MEQHVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDL---A 302 M QH+ A L+ + GLST +G+L+ V + L + GF+AG+M+ +S +++ A Sbjct: 1 MSQHLFTAFILTALAGLSTGIGSLIAFVTKHTNKTFLSVSLGFSAGVMIYVSMIEIFPTA 60 Query: 303 HNALNSIGFLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHR 482 L K+ W I + +P+ Sbjct: 61 QTILTKAMDKKSGSWLTVLAFFGGILLIAIID-KLIPSEENPHEIKTIEEEDQKPT---- 115 Query: 483 RQVLFSGIITAVGISLHNFPEGMAVFLGSVK 575 +++ G++TA+ I +HNFPEG+A F+ ++ Sbjct: 116 -KLMRMGLMTAIAIGIHNFPEGLATFISGLQ 145
>ZUPT_CORGL (Q8NQK0) Zinc transporter zupT| Length = 263 Score = 56.2 bits (134), Expect = 6e-08 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 3/146 (2%) Frame = +3 Query: 144 VLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDL---AHNAL 314 +L A L+ GL+T +G L+ + + L GF+ G+ML +SF+++ A + L Sbjct: 1 MLFAFGLTLFAGLATGIGGLIAVARKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDEL 60 Query: 315 NSIGFLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVL 494 S+ K W I + VPT R +++ Sbjct: 61 TSVWGEKGGSWAAVIGFFGGIALIAIID-RLVPTAINPHEPSTVGGAVEGFE--RRNRMM 117 Query: 495 FSGIITAVGISLHNFPEGMAVFLGSV 572 G++TA+ I++HNFPEG A FL + Sbjct: 118 KMGVLTALAIAIHNFPEGFATFLAGL 143
>ZUPT_XANCP (Q8P8Z6) Zinc transporter zupT| Length = 272 Score = 55.8 bits (133), Expect = 8e-08 Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 9/158 (5%) Frame = +3 Query: 129 EMEQH-VLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAH 305 E+ H V ALA++ GL+T LG+L+V+ P+ + L FA G M+ +S ++ + Sbjct: 3 EVSSHNVWTALAVTLAAGLATGLGSLMVVFAKKPNPRLLAFGLAFAGGAMVFVSLSEILN 62 Query: 306 NALNS--------IGFLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXX 461 ++ S +GF L +P P Sbjct: 63 KSIASFSNAYNDKLGFTYGTLTFLGGMLLIMVIDRLVPNP-----------HQSLSTDDP 111 Query: 462 XXXXXHRRQVLFSGIITAVGISLHNFPEGMAVFLGSVK 575 +R + G++TAV I+ HNFPEG+A F +++ Sbjct: 112 QFRDDNRAYIRRVGLLTAVAITAHNFPEGLATFFATLE 149
>ZUPT_XANAC (Q8PKQ5) Zinc transporter zupT| Length = 272 Score = 54.7 bits (130), Expect = 2e-07 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 8/150 (5%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNAL----- 314 +ALA++ GL+T LG+L+V+ P+ + L FA G M+ +S ++ + ++ Sbjct: 11 IALAVTLAAGLATGLGSLMVVFAKKPNPRLLAFGLAFAGGAMVYVSLTEILNKSIAAFSQ 70 Query: 315 ---NSIGFLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRR 485 + +GF L +P P +R Sbjct: 71 AYNDKLGFTFGTLTFLGGMLLIMVIDRLVPNP-----------HQSLSSDDPQFREDNRA 119 Query: 486 QVLFSGIITAVGISLHNFPEGMAVFLGSVK 575 + G++TAV I+ HNFPEG+A F +++ Sbjct: 120 YIRRVGLMTAVAITAHNFPEGLATFFATLE 149
>ZUPT_CLOPE (Q8XMG8) Zinc transporter zupT| Length = 285 Score = 52.8 bits (125), Expect = 7e-07 Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 14/159 (8%) Frame = +3 Query: 141 HVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDL---AHNA 311 +VL+A L+ + GL+T +G+ + + K L + GF+AG+M+ +S +++ A + Sbjct: 9 NVLMAFLLTLLAGLATGIGSCIAFFAKKTNKKFLCVSLGFSAGVMIYVSMIEMFQTAKES 68 Query: 312 LNSIGFLKANLWXXXXXXXXXXXXXXIPEPTFVP-----------TXXXXXXXXXXXXXX 458 L + +KA W + + FVP Sbjct: 69 LVGVMGIKAGNWITVISFFAGIAIIALID-KFVPEEENPHEVRSVEEVENEIEEYKGENK 127 Query: 459 XXXXXXHRRQVLFSGIITAVGISLHNFPEGMAVFLGSVK 575 + ++ +GI+TA+ I++HNFPEG+A F+ +++ Sbjct: 128 EGKADIKDKTLMRTGIVTALAIAIHNFPEGLATFVSALE 166
>ZUPT_OCEIH (Q8ENQ1) Zinc transporter zupT| Length = 268 Score = 49.3 bits (116), Expect = 8e-06 Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 3/147 (2%) Frame = +3 Query: 141 HVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDL---AHNA 311 ++L+A L+ GL+T +G+L+ + + + K L G +AG+M+ +S +D+ A +A Sbjct: 3 NMLLAFLLTLFAGLATGVGSLIAFMAKTTNTKFLSFALGLSAGVMIYVSMVDIFFKAKDA 62 Query: 312 LNSIGFLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQV 491 L + W + F+P + Sbjct: 63 LTAYLGDTQGYWLTVIAFFGGMLLIGFID-RFIPKYTNPHEVKKVEDMKKPHQPLRDPDL 121 Query: 492 LFSGIITAVGISLHNFPEGMAVFLGSV 572 + G+ TA+ +++HNFPEG+A F+ ++ Sbjct: 122 MKMGLFTALALAIHNFPEGIATFVSTL 148
>ZUPT_SHIFL (Q7UBJ3) Zinc transporter zupT| Length = 257 Score = 48.1 bits (113), Expect = 2e-05 Identities = 37/138 (26%), Positives = 57/138 (41%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNSIGF 329 V L L+ + G +T +GA L ++ P + L GFAAG+ML IS +++ AL + G Sbjct: 3 VPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGM 62 Query: 330 LKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVLFSGII 509 + P P + + + I+ Sbjct: 63 SPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQLL-----------PKSIKRTAIL 111 Query: 510 TAVGISLHNFPEGMAVFL 563 +GISLHNFPEG+A F+ Sbjct: 112 LTLGISLHNFPEGIATFV 129
>ZUPT_SALTY (P67470) Zinc transporter zupT| Length = 257 Score = 48.1 bits (113), Expect = 2e-05 Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 6/144 (4%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNSIGF 329 V L L+ + G +T +GA L ++ P + L GFAAG+ML IS +++ AL++ G Sbjct: 3 VPLILTLLAGAATFIGAFLGVLGQKPSNRVLAFSLGFAAGIMLLISLMEMLPAALDTEGM 62 Query: 330 LKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVLFSG-- 503 + F+ +RQ G Sbjct: 63 -----------------SPVLGYGMFIIGLLGYFGLDRLLPHAHPQDLVQKRQQPLPGSI 105 Query: 504 ----IITAVGISLHNFPEGMAVFL 563 I+ +GISLHNFPEG+A F+ Sbjct: 106 KRTAILLTLGISLHNFPEGIATFV 129
>ZUPT_SALTI (P67471) Zinc transporter zupT| Length = 257 Score = 48.1 bits (113), Expect = 2e-05 Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 6/144 (4%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNSIGF 329 V L L+ + G +T +GA L ++ P + L GFAAG+ML IS +++ AL++ G Sbjct: 3 VPLILTLLAGAATFIGAFLGVLGQKPSNRVLAFSLGFAAGIMLLISLMEMLPAALDTEGM 62 Query: 330 LKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVLFSG-- 503 + F+ +RQ G Sbjct: 63 -----------------SPVLGYGMFIIGLLGYFGLDRLLPHAHPQDLVQKRQQPLPGSI 105 Query: 504 ----IITAVGISLHNFPEGMAVFL 563 I+ +GISLHNFPEG+A F+ Sbjct: 106 KRTAILLTLGISLHNFPEGIATFV 129
>ZUPT_ECOLI (P0A8H3) Zinc transporter zupT| Length = 257 Score = 47.8 bits (112), Expect = 2e-05 Identities = 37/138 (26%), Positives = 57/138 (41%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNSIGF 329 V L L+ + G +T +GA L ++ P + L GFAAG+ML IS +++ AL + G Sbjct: 3 VPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGM 62 Query: 330 LKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVLFSGII 509 + P P + + + I+ Sbjct: 63 SPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPL-----------PKSIKRTAIL 111 Query: 510 TAVGISLHNFPEGMAVFL 563 +GISLHNFPEG+A F+ Sbjct: 112 LTLGISLHNFPEGIATFV 129
>ZUPT_ECOL6 (P0A8H4) Zinc transporter zupT| Length = 257 Score = 47.8 bits (112), Expect = 2e-05 Identities = 37/138 (26%), Positives = 57/138 (41%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNSIGF 329 V L L+ + G +T +GA L ++ P + L GFAAG+ML IS +++ AL + G Sbjct: 3 VPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGM 62 Query: 330 LKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVLFSGII 509 + P P + + + I+ Sbjct: 63 SPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPL-----------PKSIKRTAIL 111 Query: 510 TAVGISLHNFPEGMAVFL 563 +GISLHNFPEG+A F+ Sbjct: 112 LTLGISLHNFPEGIATFV 129
>ZUPT_ECO57 (P0A8H5) Zinc transporter zupT| Length = 257 Score = 47.8 bits (112), Expect = 2e-05 Identities = 37/138 (26%), Positives = 57/138 (41%) Frame = +3 Query: 150 VALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNSIGF 329 V L L+ + G +T +GA L ++ P + L GFAAG+ML IS +++ AL + G Sbjct: 3 VPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGM 62 Query: 330 LKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXXHRRQVLFSGII 509 + P P + + + I+ Sbjct: 63 SPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPL-----------PKSIKRTAIL 111 Query: 510 TAVGISLHNFPEGMAVFL 563 +GISLHNFPEG+A F+ Sbjct: 112 LTLGISLHNFPEGIATFV 129
>ZUPT_CAMJE (Q9PIN2) Zinc transporter zupT| Length = 291 Score = 46.2 bits (108), Expect = 7e-05 Identities = 20/59 (33%), Positives = 38/59 (64%) Frame = +3 Query: 138 QHVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNAL 314 + + +A+ L+ G ST++G+++ + DL+ L L GF+AG+M+ ISF+++ AL Sbjct: 6 EQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGLGFSAGVMIYISFMEILPTAL 64 Score = 36.6 bits (83), Expect = 0.053 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = +3 Query: 498 SGIITAVGISLHNFPEGMAVFLGSV 572 +GI TA+ I++HNFPEG A F+ S+ Sbjct: 146 TGIFTALAIAIHNFPEGFATFISSL 170 Score = 29.6 bits (65), Expect = 6.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +3 Query: 501 GIITAVGISLHNFPEGMAVFL 563 GI A+ +++HN PEG+AV L Sbjct: 176 GIAIAIAVAIHNIPEGLAVSL 196
>ZUPT_NEIMB (Q9K1H6) Zinc transporter zupT| Length = 269 Score = 43.9 bits (102), Expect = 3e-04 Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 8/153 (5%) Frame = +3 Query: 141 HVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNS 320 ++ VA +++ GL T LG+ LV+ + +P+ + L FA G M+ +S ++ + + Sbjct: 8 NLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEIFSKSSEA 67 Query: 321 IG--------FLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXX 476 F A + +P P Sbjct: 68 FAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP-----------HETLDAQDPSFQES 116 Query: 477 HRRQVLFSGIITAVGISLHNFPEGMAVFLGSVK 575 RR + G++ A I+ HNFPEG+A F +++ Sbjct: 117 KRRHIARVGMMAAFAITAHNFPEGLATFFATLE 149
>ZUPT_NEIMA (Q9JX23) Zinc transporter zupT| Length = 269 Score = 43.9 bits (102), Expect = 3e-04 Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 8/153 (5%) Frame = +3 Query: 141 HVLVALALSFVGGLSTSLGALLVIVNPSPDLKRLGLLQGFAAGLMLSISFLDLAHNALNS 320 ++ VA +++ GL T LG+ LV+ + +P+ + L FA G M+ +S ++ + + Sbjct: 8 NLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEIFSKSSEA 67 Query: 321 IG--------FLKANLWXXXXXXXXXXXXXXIPEPTFVPTXXXXXXXXXXXXXXXXXXXX 476 F A + +P P Sbjct: 68 FAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP-----------HETLDAQDPSFQES 116 Query: 477 HRRQVLFSGIITAVGISLHNFPEGMAVFLGSVK 575 RR + G++ A I+ HNFPEG+A F +++ Sbjct: 117 KRRHIARVGMMAAFAITAHNFPEGLATFFATLE 149
>MRP_RABIT (P35566) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) Length = 198 Score = 33.1 bits (74), Expect = 0.58 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 373 PKKRTPAKNQRLAFKKPMELSALC-ARSRNEMLNISPAAKP 254 P K TP K ++ +FKKP +LS L R+R E S A+ P Sbjct: 80 PPKETPKKKKKFSFKKPFKLSGLSFKRNRKEGGGDSSASSP 120
>MRP_HUMAN (P49006) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) Length = 194 Score = 33.1 bits (74), Expect = 0.58 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -3 Query: 373 PKKRTPAKNQRLAFKKPMELSALC-ARSRNEMLNISPAAKP 254 P K TP K ++ +FKKP +LS L R+R E S A+ P Sbjct: 80 PPKETPKKKKKFSFKKPFKLSGLSFKRNRKEGGGDSSASSP 120
>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)| Length = 1683 Score = 32.7 bits (73), Expect = 0.76 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = -3 Query: 370 KKRTPAKN------QRLAF--KKPMELSALCARSRNEMLNISPAAKPWRRPSLLRSGEGF 215 +KRTP N QR A K+P+ L + R + SP + WR+P L GF Sbjct: 1475 RKRTPLHNDNSWIRQRSASVNKEPVSLPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGF 1534 Query: 214 TITSSAPREVLRPP 173 SS+ ++ RPP Sbjct: 1535 -YASSSVQDFSRPP 1547
>H1C1_XENLA (P15866) Histone H1C (Clone XLHW2)| Length = 216 Score = 31.6 bits (70), Expect = 1.7 Identities = 20/67 (29%), Positives = 35/67 (52%) Frame = -3 Query: 376 KPKKRTPAKNQRLAFKKPMELSALCARSRNEMLNISPAAKPWRRPSLLRSGEGFTITSSA 197 K KK AK + + KKP ++SA A+S + AAK ++P ++S + +T S Sbjct: 131 KAKKPVTAKKKPKSPKKPKKVSAAAAKSPKKAKKPVKAAKSPKKPKAVKSKK---VTKSP 187 Query: 196 PREVLRP 176 ++ +P Sbjct: 188 AKKATKP 194
>NU6M_STRCA (O21407) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 173 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +3 Query: 177 GLSTSLGALLVIVNPSPDLKRLGLLQGFAAG----LMLSISFLDLA 302 G LGA+ V NPSP LGL+ G G L L +SF+ LA Sbjct: 9 GFCFILGAVAVASNPSPYYGVLGLVVGSVVGCGWLLSLGVSFISLA 54
>MRP_RAT (Q9EPH2) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) (Brain protein F52) Length = 198 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -3 Query: 367 KRTPAKNQRLAFKKPMELSALC-ARSRNEMLNISPAAKP 254 K TP K ++ +FKKP +LS L R+R E S A+ P Sbjct: 82 KETPKKKKKFSFKKPFKLSGLSFKRNRKEGGGDSSASSP 120
>MRP_MOUSE (P28667) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) (Brain protein F52) Length = 199 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -3 Query: 367 KRTPAKNQRLAFKKPMELSALC-ARSRNEMLNISPAAKP 254 K TP K ++ +FKKP +LS L R+R E S A+ P Sbjct: 82 KETPKKKKKFSFKKPFKLSGLSFKRNRKEGGGDSSASSP 120
>H1C2_XENLA (P15867) Histone H1C (Clone XLHW8)| Length = 220 Score = 29.6 bits (65), Expect = 6.4 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = -3 Query: 376 KPKKRTPAKNQRLAFKKPMELSALCARSRNEMLNISPAAKPWRRPSLLRSGEGFTITSSA 197 K KK AK + + KKP ++SA A+S + AAK ++P ++ + +T S Sbjct: 130 KAKKPVAAKKKPKSPKKPKKVSAAAAKSPKKAKKPVKAAKSPKKPKAVKPKK---VTKSP 186 Query: 196 PREVLRP 176 ++ +P Sbjct: 187 AKKATKP 193
>S39A1_FUGRU (Q6QQT1) Zinc transporter ZIP1 (Solute carrier family 39 member 1)| Length = 302 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +3 Query: 246 LLQGFAAGLMLSISFLDLAHNALNSIG 326 +L+GFAAG + I+FL++ + LNS G Sbjct: 253 ILEGFAAGTFVYITFLEILPHELNSPG 279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,653,294 Number of Sequences: 219361 Number of extensions: 1121195 Number of successful extensions: 3585 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3464 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3583 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
