ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart26g05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcgccgg 242 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 23332587 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 23332528 Query: 243 cgcc 246 |||| Sbjct: 23332527 cgcc 23332524 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 293 ggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 23332453 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 23332415 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 191 ttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||||||||||||||| |||||||||| Sbjct: 10070980 ttcggcgactcgctggtggacagcggcaacaac 10070948 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 23332089 gccaactacgcctccagcggatccggcatcctcgac 23332054
>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full insert sequence Length = 1582 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcgccgg 242 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 167 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 226 Query: 243 cgcc 246 |||| Sbjct: 227 cgcc 230 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 293 ggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 301 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 339 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 433 gccaactacgcctccagcggatccggcatcctcgac 468
>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full insert sequence Length = 1741 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcgccgg 242 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 167 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 226 Query: 243 cgcc 246 |||| Sbjct: 227 cgcc 230 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 293 ggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 301 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 339 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 433 gccaactacgcctccagcggatccggcatcctcgac 468
>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full insert sequence Length = 1637 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcgccgg 242 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 241 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 300 Query: 243 cgcc 246 |||| Sbjct: 301 cgcc 304 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 293 ggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 375 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 413 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 507 gccaactacgcctccagcggatccggcatcctcgac 542
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcgccgg 242 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 23260778 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 23260719 Query: 243 cgcc 246 |||| Sbjct: 23260718 cgcc 23260715 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 293 ggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 23260644 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 23260606 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 191 ttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||||||||||||||| |||||||||| Sbjct: 10070865 ttcggcgactcgctggtggacagcggcaacaac 10070833 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 23260280 gccaactacgcctccagcggatccggcatcctcgac 23260245
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcgccgg 242 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 145705 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgacttcctgccgccgccgg 145646 Query: 243 cgcc 246 |||| Sbjct: 145645 cgcc 145642 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 293 ggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 145571 ggccgcttcaccaacggcttcaacctcgccgacgtcatc 145533 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 145207 gccaactacgcctccagcggatccggcatcctcgac 145172
>ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 357 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 411 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 695 gccaattacgcttctggaggatccggcattctcgataccac 735 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 459 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 506
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA Length = 1637 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 354 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 408 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 594 gccaattacgcttctggaggatccggcattctcgataccac 634 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 456 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 503
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1637 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 353 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 407 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 593 gccaattacgcttctggaggatccggcattctcgataccac 633 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 455 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 502
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 30985736 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 30985682 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||||||||||||| ||| ||||| ||||||||| |||||||| Sbjct: 27176385 cgtgttcggcgactcgacggttgacgtgggcaacaacaactacctg 27176340 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 |||||||||||||||||| |||| ||||||| Sbjct: 547505 cggcaggcccaccggccggttcagcaacggc 547475 Score = 44.1 bits (22), Expect = 0.47 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg-ccggcgccg 241 ||||||||||||||||| || || |||||||||||| |||||||| ||||||||| Sbjct: 27181085 tacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccg 27181028 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||||||||| || || ||| |||||||||| |||||||| Sbjct: 24535958 cgtgttcggcgactccctcgtcgacaacggcaacaacaactacctg 24536003 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 30985398 gccaattacgcttctggaggatccggcattctcgataccac 30985358 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactac 229 |||||||||||||||||| || |||||| || |||||| ||||| Sbjct: 30574646 tacgtgttcggcgactcgatgtcggacgtggggaacaacaactac 30574602 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 |||||||||||||||| |||||||| ||| |||||| Sbjct: 15410481 cgtgttcggcgactcgacggtggacgccgggaacaac 15410517 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 30985634 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 30985587 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 285 ggcccaccggccgcttcaccaacggctacaac 316 ||||||||||||| |||| |||||| |||||| Sbjct: 27180976 ggcccaccggccggttcagcaacgggtacaac 27180945
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 40692 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 40638 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 40354 gccaattacgcttctggaggatccggcattctcgataccac 40314 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 40590 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 40543
>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full insert sequence Length = 888 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 357 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 411 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 695 gccaattacgcttctggaggatccggcattctcgataccac 735 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 459 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 506
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full insert sequence Length = 1637 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 353 gtgtacgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 407 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 593 gccaattacgcttctggaggatccggcattctcgataccac 633 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 455 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 502
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||| ||||||||| | ||||||||||||||||| || ||||||||| Sbjct: 30314196 gtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccgg 30314142 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 6747010 ttcggcgactcgctgtcggacgtgggcaacaacgactacctg 6747051 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 19494537 ttcggggactcgctggtggacgccggcaac 19494508 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 tggacgtcggcaacaacgactacct 231 ||||||||||||||||| ||||||| Sbjct: 30323847 tggacgtcggcaacaacaactacct 30323823
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||| ||||||||| | ||||||||||||||||| || ||||||||| Sbjct: 60791 gtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccgg 60737 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 tggacgtcggcaacaacgactacct 231 ||||||||||||||||| ||||||| Sbjct: 70442 tggacgtcggcaacaacaactacct 70418
>dbj|AK110292.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G01, full insert sequence Length = 1588 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||| ||||||||| | ||||||||||||||||| || ||||||||| Sbjct: 301 gtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccgg 355
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full insert sequence Length = 1637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 186 acgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||| |||||||||||| |||||| | |||||||||| Sbjct: 358 acgtgttcggcgactcgacggtggacgtcgggaacaaccagtacctgccgg 408 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgacaccac 462 ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 594 gccaattacgcttctggaggatccggcattctcgataccac 634 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 284 aggcccaccggccgcttcaccaacggctacaacctcgccgacgtcatc 331 ||||||||||| | |||| ||| ||||||||| |||||||| ||||| Sbjct: 456 aggcccaccggaaggttcagcaatggctacaacgtcgccgacttcatc 503
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 224 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 269
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 28339358 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 28339403 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 gacgtcggcaacaacgactacctgc 233 ||||||||||||||| ||||||||| Sbjct: 21912164 gacgtcggcaacaacaactacctgc 21912188
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 76689 ttcggcgactcgctgtcggacgtgggcaacaacgactacctg 76730
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 68164 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 68209
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 131173 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 131218
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 224 cgtgtttggcgactcgctggtggacagcggcaacaacaactacctg 269
>gb|AY105081.1| Zea mays PCO097316 mRNA sequence Length = 1518 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 416 attggtgccaactacgcttccggtggatccggcatcctcgacaccacgggaaaagggacg 475 ||||||||||| ||||| || || ||||| ||||| ||| ||||||||||||| ||||| Sbjct: 523 attggtgccaattacgcgtctggcggatctggcattctcaacaccacgggaaacgggaca 582 Query: 476 ctcacg 481 |||||| Sbjct: 583 ctcacg 588
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacct 231 ||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 122 cgtgttcggcgactcgctggtggacaacggcaataacaactacct 166
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacct 231 ||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 103351 cgtgttcggcgactcgctggtggacaacggcaataacaactacct 103307
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacct 231 ||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 16556891 cgtgttcggcgactcgctggtggacaacggcaataacaactacct 16556935
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacct 231 ||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 134 cgtgttcggcgactcgctggtggacaacggcaataacaactacct 178
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacct 231 ||||||||||||||||||||||||| |||||| ||| ||||||| Sbjct: 16565132 cgtgttcggcgactcgctggtggacaacggcaataacaactacct 16565176
>ref|XM_463033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcg 238 |||||||| | |||||||||| || |||||| || |||||| |||||||||||||| Sbjct: 119 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 174
>ref|XM_463028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgc 233 ||||||||| ||||||||||||||| |||||| || |||||| || |||||| Sbjct: 97 gtgtacgtgctcggcgactcgctggcggacgtggggaacaacaaccacctgc 148
>gb|BT018449.1| Zea mays clone EL01N0407B08.d mRNA sequence Length = 1302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 263 tacggcatggacctccccggcaggcccaccggccgcttcaccaacggctaca 314 |||||||| ||| || ||||| | ||||||||||||||| |||||||||||| Sbjct: 129 tacggcatcgacttcgccggcggccccaccggccgcttctccaacggctaca 180
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcg 238 |||||||| | |||||||||| || |||||| || |||||| |||||||||||||| Sbjct: 21123519 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 21123464 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgc 233 ||||||||| ||||||||||||||| |||||| || |||||| || |||||| Sbjct: 21089760 gtgtacgtgctcggcgactcgctggcggacgtggggaacaacaaccacctgc 21089709 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 281 ggcaggcccaccggccgcttcaccaacggctacaacctcgccgac 325 |||| |||||||||| | |||| ||||||||||||| ||| |||| Sbjct: 21161623 ggcaagcccaccggcaggttcagcaacggctacaacttcgtcgac 21161667 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 gacgtcggcaacaacgactacctgc 233 ||||||||||||||| ||||||||| Sbjct: 15819033 gacgtcggcaacaacaactacctgc 15819057
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcg 238 |||||||| | |||||||||| || |||||| || |||||| |||||||||||||| Sbjct: 101275 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 101220 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgc 233 ||||||||| ||||||||||||||| |||||| || |||||| || |||||| Sbjct: 67516 gtgtacgtgctcggcgactcgctggcggacgtggggaacaacaaccacctgc 67465
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccggcg 238 |||||||| | |||||||||| || |||||| || |||||| |||||||||||||| Sbjct: 21116548 tgtacgtgctgggcgactcgcaggcggacgtagggaacaacaactacctgccggcg 21116493 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 182 gtgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgc 233 ||||||||| ||||||||||||||| |||||| || |||||| || |||||| Sbjct: 21082789 gtgtacgtgctcggcgactcgctggcggacgtggggaacaacaaccacctgc 21082738 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 281 ggcaggcccaccggccgcttcaccaacggctacaacctcgccgac 325 |||| |||||||||| | |||| ||||||||||||| ||| |||| Sbjct: 21154652 ggcaagcccaccggcaggttcagcaacggctacaacttcgtcgac 21154696 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 gacgtcggcaacaacgactacctgc 233 ||||||||||||||| ||||||||| Sbjct: 15813567 gacgtcggcaacaacaactacctgc 15813591
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 ||||| ||||||||||||||||||||||||| Sbjct: 28170954 cggcatgcccaccggccgcttcaccaacggc 28170924 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ctgccggcgccggcgcccagggcg 253 ||||||||||||||||||| |||| Sbjct: 7306790 ctgccggcgccggcgcccatggcg 7306767
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 ||||| ||||||||||||||||||||||||| Sbjct: 26499 cggcatgcccaccggccgcttcaccaacggc 26469
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 ||||| ||||||||||||||||||||||||| Sbjct: 154250 cggcatgcccaccggccgcttcaccaacggc 154220
>dbj|AK061122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G04, full insert sequence Length = 1666 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 ||||| ||||||||||||||||||||||||| Sbjct: 366 cggcatgcccaccggccgcttcaccaacggc 396
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||||||||||||| ||| ||||| ||||||||| |||||||| Sbjct: 72834 cgtgttcggcgactcgacggttgacgtgggcaacaacaactacctg 72789 Score = 44.1 bits (22), Expect = 0.47 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg-ccggcgccg 241 ||||||||||||||||| || || |||||||||||| |||||||| ||||||||| Sbjct: 77534 tacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccg 77477 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 285 ggcccaccggccgcttcaccaacggctacaac 316 ||||||||||||| |||| |||||| |||||| Sbjct: 77425 ggcccaccggccggttcagcaacgggtacaac 77394
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 |||||||||||||||| ||| ||||| ||||||||| |||||||| Sbjct: 27056 cgtgttcggcgactcgacggttgacgtgggcaacaacaactacctg 27011 Score = 44.1 bits (22), Expect = 0.47 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg-ccggcgccg 241 ||||||||||||||||| || || |||||||||||| |||||||| ||||||||| Sbjct: 31756 tacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccg 31699 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 285 ggcccaccggccgcttcaccaacggctacaac 316 ||||||||||||| |||| |||||| |||||| Sbjct: 31647 ggcccaccggccggttcagcaacgggtacaac 31616
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||| ||||||||||||||| |||||||||| Sbjct: 102 cgtgttcggggactcgctggtggacaacggcaacaac 138
>ref|XM_463381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 103 cttcgtcctcgtcggcgccgtgtgc 127 ||||||||||||||||||||||||| Sbjct: 216 cttcgtcctcgtcggcgccgtgtgc 240
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||| ||||||||||||||| |||||||||| Sbjct: 984 cgtgttcggggactcgctggtggacaacggcaacaac 948
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||| ||||||||||||||| |||||||||| Sbjct: 124936 cgtgttcggggactcgctggtggacaacggcaacaac 124900
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||| ||||||||||||||| |||||||||| Sbjct: 25484575 cgtgttcggggactcgctggtggacaacggcaacaac 25484539 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 263 tacggcatggacctccccggcaggcccaccggccgcttcaccaacggctaca 314 |||||||| ||| || ||||| | || |||||||||||| |||||||||||| Sbjct: 20442305 tacggcatcgacttcgccggcggcccaaccggccgcttctccaacggctaca 20442356 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tcgtcggcgccgtgtgcgcctcga 134 ||||||||| |||||||||||||| Sbjct: 21103901 tcgtcggcgtcgtgtgcgcctcga 21103924
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 103 cttcgtcctcgtcggcgccgtgtgc 127 ||||||||||||||||||||||||| Sbjct: 23443586 cttcgtcctcgtcggcgccgtgtgc 23443610 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 6277769 ttcggggactcgctggtggacgccggcaac 6277798 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 188 gtgttcggcgactcgctggtggacgtcggcaa 219 |||||||||||||||| ||| |||| |||||| Sbjct: 42249475 gtgttcggcgactcgccggttgacgacggcaa 42249444 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||| |||||||||| Sbjct: 6266764 cccaccggccgctgcaccaacggc 6266787
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 103 cttcgtcctcgtcggcgccgtgtgc 127 ||||||||||||||||||||||||| Sbjct: 6891 cttcgtcctcgtcggcgccgtgtgc 6915
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||||||||||||||| |||||||||| Sbjct: 176 ttcggcgactcgctggtggacagcggcaacaac 208
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||| ||||||||||||||| |||||||||| Sbjct: 166 cgtgttcggggactcgctggtggacaacggcaacaac 202
>dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C12, full insert sequence Length = 1328 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 303 ccaacggctacaacctcgccgacgtcatc 331 ||||||||| ||||||||||||||||||| Sbjct: 76 ccaacggcttcaacctcgccgacgtcatc 104 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 422 gccaactacgcttccggtggatccggcatcctcgac 457 ||||||||||| ||| | |||||||||||||||||| Sbjct: 198 gccaactacgcctccagcggatccggcatcctcgac 233
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaacaac 223 ||||||||||||||||||||| |||||||||| Sbjct: 91641 ttcggcgactcgctggtggacagcggcaacaac 91673
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 263 tacggcatggacctccccggcaggcccaccggccgcttcaccaacggctaca 314 |||||||| ||| || ||||| | || |||||||||||| |||||||||||| Sbjct: 114050 tacggcatcgacttcgccggcggcccaaccggccgcttctccaacggctaca 114101
>dbj|AK100958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K23, full insert sequence Length = 1556 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 263 tacggcatggacctccccggcaggcccaccggccgcttcaccaacggctaca 314 |||||||| ||| || ||||| | || |||||||||||| |||||||||||| Sbjct: 296 tacggcatcgacttcgccggcggcccaaccggccgcttctccaacggctaca 347
>ref|XM_463819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1742 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 |||||||||||||||||| |||| ||||||| Sbjct: 551 cggcaggcccaccggccggttcagcaacggc 581
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 |||||||||||||||||| |||| ||||||| Sbjct: 25558 cggcaggcccaccggccggttcagcaacggc 25528
>dbj|AK106946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D11, full insert sequence Length = 1742 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 |||||||||||||||||| |||| ||||||| Sbjct: 551 cggcaggcccaccggccggttcagcaacggc 581
>dbj|AK103614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K20, full insert sequence Length = 1416 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cggcaggcccaccggccgcttcaccaacggc 310 |||||| ||||||||||||| |||||||||| Sbjct: 320 cggcagccccaccggccgctgcaccaacggc 350
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 100 ttcggggactcgctggtggacgccggcaac 129
>ref|XM_466762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1344 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||||||||| || || ||| |||||||||| |||||||| Sbjct: 192 cgtgttcggcgactccctcgtcgacaacggcaacaacaactacctg 237
>ref|XM_473495.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||| ||||| ||||||||||||||||||| ||| |||| Sbjct: 102 cgtgttcggggactccacggtggacgtcggcaacaacaacttcctg 147
>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence Length = 1429 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 183 tgtacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctgccgg 236 ||||||||||||||||||| || |||||| |||| |||| ||||| |||||| Sbjct: 219 tgtacgtgttcggcgactccacggcggacgtgggcaccaacaactacttgccgg 272
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||| ||||| ||||||||||||||||||| ||| |||| Sbjct: 105499 cgtgttcggggactccacggtggacgtcggcaacaacaacttcctg 105454
>gb|AC154602.3| Mus musculus BAC clone RP23-343M11 from chromosome 17, complete sequence Length = 196564 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cagccacagtgagagcttgcag 68 |||||||||||||||||||||| Sbjct: 120242 cagccacagtgagagcttgcag 120221
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Minus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||| ||||| ||||||||||||||||||| ||| |||| Sbjct: 28098274 cgtgttcggggactccacggtggacgtcggcaacaacaacttcctg 28098229
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 139967 ttcggggactcgctggtggacgccggcaac 139996 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||| |||||||||| Sbjct: 128962 cccaccggccgctgcaccaacggc 128985
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 48835 ttcggggactcgctggtggacgccggcaac 48864 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||| |||||||||| Sbjct: 37830 cccaccggccgctgcaccaacggc 37853
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 112946 ttcggggactcgctggtggacgccggcaac 112917
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||||||||| || || ||| |||||||||| |||||||| Sbjct: 50059 cgtgttcggcgactccctcgtcgacaacggcaacaacaactacctg 50104
>dbj|AK108108.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B09, full insert sequence Length = 1344 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg 232 ||||||||||||||| || || ||| |||||||||| |||||||| Sbjct: 192 cgtgttcggcgactccctcgtcgacaacggcaacaacaactacctg 237
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 159 ttcggggactcgctggtggacgccggcaac 188
>dbj|AK103585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B12, full insert sequence Length = 1312 Score = 44.1 bits (22), Expect = 0.47 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg-ccggcgccg 241 ||||||||||||||||| || || |||||||||||| |||||||| ||||||||| Sbjct: 111 tacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccg 168 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 285 ggcccaccggccgcttcaccaacggctacaac 316 ||||||||||||| |||| |||||| |||||| Sbjct: 220 ggcccaccggccggttcagcaacgggtacaac 251
>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full insert sequence Length = 2958 Score = 44.1 bits (22), Expect = 0.47 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg-ccggcgccg 241 ||||||||||||||||| || || |||||||||||| |||||||| ||||||||| Sbjct: 130 tacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccg 187 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 285 ggcccaccggccgcttcaccaacggctacaac 316 ||||||||||||| |||| |||||| |||||| Sbjct: 239 ggcccaccggccggttcagcaacgggtacaac 270
>dbj|AK069801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030G06, full insert sequence Length = 2935 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 250 ttcggggactcgctggtggacgccggcaac 279
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 252 ttcggggactcgctggtggacgccggcaac 281
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 159 ttcggggactcgctggtggacgccggcaac 188
>dbj|AK059898.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F09, full insert sequence Length = 1432 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 191 ttcggcgactcgctggtggacgtcggcaac 220 ||||| |||||||||||||||| ||||||| Sbjct: 163 ttcggggactcgctggtggacgccggcaac 192
>dbj|AK059531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D08, full insert sequence Length = 1451 Score = 44.1 bits (22), Expect = 0.47 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactacctg-ccggcgccg 241 ||||||||||||||||| || || |||||||||||| |||||||| ||||||||| Sbjct: 130 tacgtgttcggcgactccacggccgatgtcggcaacaacaactacctgaccggcgccg 187 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 285 ggcccaccggccgcttcaccaacggctacaac 316 ||||||||||||| |||| |||||| |||||| Sbjct: 239 ggcccaccggccggttcagcaacgggtacaac 270
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgccggcgcccagggcga 254 ||||||||||||||||||||| Sbjct: 349627 cggcgccggcgcccagggcga 349647
>ref|XM_467638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactac 229 |||||||||||||||||| || |||||| || |||||| ||||| Sbjct: 100 tacgtgttcggcgactcgatgtcggacgtggggaacaacaactac 144
>ref|XM_465469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 |||||||||||||||| |||||||| ||| |||||| Sbjct: 114 cgtgttcggcgactcgacggtggacgccgggaacaac 150
>ref|XM_463040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1104 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 281 ggcaggcccaccggccgcttcaccaacggctacaacctcgccgac 325 |||| |||||||||| | |||| ||||||||||||| ||| |||| Sbjct: 232 ggcaagcccaccggcaggttcagcaacggctacaacttcgtcgac 276
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 gacgtcggcaacaacgactacctgc 233 ||||||||||||||| ||||||||| Sbjct: 80833 gacgtcggcaacaacaactacctgc 80857
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 281 ggcaggcccaccggccgcttcaccaacggctacaacctcgccgac 325 |||| |||||||||| | |||| ||||||||||||| ||| |||| Sbjct: 17538 ggcaagcccaccggcaggttcagcaacggctacaacttcgtcgac 17582
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 ttcgtcctcgtcggcgccgtgtgcg 128 ||||| ||||||||||||||||||| Sbjct: 168321 ttcgtgctcgtcggcgccgtgtgcg 168345
>emb|AJ720475.1| Gallus gallus mRNA for hypothetical protein, clone 18i2 Length = 3781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gcagcggccatggcgaggagc 88 ||||||||||||||||||||| Sbjct: 12 gcagcggccatggcgaggagc 32
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 caccaacggctacaacctcgc 321 ||||||||||||||||||||| Sbjct: 2840073 caccaacggctacaacctcgc 2840053
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 217 caacaacgactacctgccggcgccggcgc 245 ||||||||| ||||||||||||| ||||| Sbjct: 1616244 caacaacgagtacctgccggcgctggcgc 1616216
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggacgtcggcaacaac 223 |||||||||||||||| |||||||| ||| |||||| Sbjct: 81263 cgtgttcggcgactcgacggtggacgccgggaacaac 81299
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 185 tacgtgttcggcgactcgctggtggacgtcggcaacaacgactac 229 |||||||||||||||||| || |||||| || |||||| ||||| Sbjct: 86654 tacgtgttcggcgactcgatgtcggacgtggggaacaacaactac 86610
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 gacgtcggcaacaacgactacctgc 233 ||||||||||||||| ||||||||| Sbjct: 112833 gacgtcggcaacaacaactacctgc 112857
>emb|AJ234640.1|HVU234640 Hordeum vulgare genomic DNA fragment; clone MWG0904.rev Length = 416 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 cgtgttcggcgactcgctggtggac 211 ||||||||| ||||||||||||||| Sbjct: 367 cgtgttcggggactcgctggtggac 391
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 cggcgccggcgcccagggcga 254 ||||||||||||||||||||| Sbjct: 1137797 cggcgccggcgcccagggcga 1137817
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccggcgccggcgcccagggcgaac 256 ||||||||||||||| |||||||| Sbjct: 51137 ccggcgccggcgcccggggcgaac 51160
>ref|NM_188436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||| |||||||||| Sbjct: 205 cccaccggccgctgcaccaacggc 228
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cggcgcccagggcgaaccgg 259 |||||||||||||||||||| Sbjct: 1769884 cggcgcccagggcgaaccgg 1769903
>ref|XM_475287.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tcgtcggcgccgtgtgcgcctcga 134 ||||||||| |||||||||||||| Sbjct: 314 tcgtcggcgtcgtgtgcgcctcga 337
>ref|XM_477181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 971 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ctgccggcgccggcgcccagggcg 253 ||||||||||||||||||| |||| Sbjct: 89 ctgccggcgccggcgcccatggcg 112
>ref|XM_363147.1| Magnaporthe grisea 70-15 hypothetical protein (MG08731.4) partial cds Length = 2499 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gccggcgccggcgcccaggg 251 |||||||||||||||||||| Sbjct: 1083 gccggcgccggcgcccaggg 1102
>ref|XM_953781.1| Neurospora crassa OR74A hypothetical protein (NCU07381.1) partial mRNA Length = 2631 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tacttcaagaaggcggcgga 519 |||||||||||||||||||| Sbjct: 154 tacttcaagaaggcggcgga 173
>ref|XM_327666.1| Neurospora crassa OR74A hypothetical protein (NCU07381.1) partial mRNA Length = 2631 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tacttcaagaaggcggcgga 519 |||||||||||||||||||| Sbjct: 154 tacttcaagaaggcggcgga 173
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tcgtcggcgccgtgtgcgcctcga 134 ||||||||| |||||||||||||| Sbjct: 82766 tcgtcggcgtcgtgtgcgcctcga 82789
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 caccggccgcttcaccaacggctacaac 316 |||| |||||||||||| |||||||||| Sbjct: 5722588 caccagccgcttcaccagcggctacaac 5722561
>gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, complete sequence Length = 172863 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 aggagcattgctctgctctgcttc 106 |||||||||| ||||||||||||| Sbjct: 114308 aggagcattggtctgctctgcttc 114285
>gb|AC128739.4| Mus musculus BAC clone RP24-168G14 from chromosome 19, complete sequence Length = 195342 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 aggagcattgctctgctctgcttc 106 |||||||||| ||||||||||||| Sbjct: 14216 aggagcattggtctgctctgcttc 14193
>emb|AL162754.2|NMA3Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 3/7 Length = 311321 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 caacggctacaacctcgccg 323 |||||||||||||||||||| Sbjct: 310045 caacggctacaacctcgccg 310064
>emb|CR932808.1| Mus musculus chromosome 2, clone RPCI-21-370D12 strain 129/Sv, complete sequence Length = 163435 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 agcattgctctgctctgctt 105 |||||||||||||||||||| Sbjct: 95307 agcattgctctgctctgctt 95288
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccggcgcccagggcgaac 256 |||||||||||||||||||| Sbjct: 1728765 cgccggcgcccagggcgaac 1728784
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 caacggctacaacctcgccg 323 |||||||||||||||||||| Sbjct: 853752 caacggctacaacctcgccg 853771
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 20970919 cccaccggccgcttctccaacggc 20970896 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 2448642 cccaccggccgcttctccaacggc 2448665
>gb|AC010148.13| Homo sapiens BAC clone RP11-367B19 from 2, complete sequence Length = 231562 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cttgcctcttgctagctacc 45 |||||||||||||||||||| Sbjct: 199940 cttgcctcttgctagctacc 199959
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 188 gtgttcggcgactcgctggtggacgtcggcaa 219 |||||||||||||||| ||| |||| |||||| Sbjct: 21432 gtgttcggcgactcgccggttgacgacggcaa 21401
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ccagggcgaaccggccgtac 265 |||||||||||||||||||| Sbjct: 7136365 ccagggcgaaccggccgtac 7136384 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cttcgtcctcgtcggcgccg 122 |||||||||||||||||||| Sbjct: 2382461 cttcgtcctcgtcggcgccg 2382442
>gb|AE004746.1| Pseudomonas aeruginosa PAO1, section 307 of 529 of the complete genome Length = 10596 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccggcgcccagggcgaac 256 |||||||||||||||||||| Sbjct: 654 cgccggcgcccagggcgaac 635
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 127052 cccaccggccgcttctccaacggc 127075
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 35232 cccaccggccgcttctccaacggc 35255
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggcgccggcgcccagggcga 254 |||||||||||||||||||| Sbjct: 3601659 ggcgccggcgcccagggcga 3601640
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 63008 cccaccggccgcttctccaacggc 62985
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ctgccggcgccggcgcccagggcg 253 ||||||||||||||||||| |||| Sbjct: 33471 ctgccggcgccggcgcccatggcg 33448
>dbj|AK112006.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B09, full insert sequence Length = 1300 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 253 cccaccggccgcttctccaacggc 276
>dbj|AK111927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C10, full insert sequence Length = 1463 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 277 cccaccggccgcttctccaacggc 300
>dbj|AK105422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B12, full insert sequence Length = 1772 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||| |||||||||| Sbjct: 632 cccaccggccgctgcaccaacggc 655
>dbj|AK069953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037H24, full insert sequence Length = 970 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ctgccggcgccggcgcccagggcg 253 ||||||||||||||||||| |||| Sbjct: 88 ctgccggcgccggcgcccatggcg 111
>dbj|AK059766.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G04, full insert sequence Length = 1134 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 253 cccaccggccgcttctccaacggc 276
>dbj|AK059484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F09, full insert sequence Length = 1326 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cccaccggccgcttcaccaacggc 310 ||||||||||||||| |||||||| Sbjct: 256 cccaccggccgcttctccaacggc 279
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 caacggctacaacctcgccg 323 |||||||||||||||||||| Sbjct: 397963 caacggctacaacctcgccg 397982
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence Length = 207901 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ctgggtttcgagatgagccccaag 364 |||||||||||||| ||||||||| Sbjct: 173276 ctgggtttcgagatcagccccaag 173253
>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete sequence Length = 180252 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agcattgctctgctctgctt 105 |||||||||||||||||||| Sbjct: 26586 agcattgctctgctctgctt 26605 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,932,573 Number of Sequences: 3902068 Number of extensions: 2932573 Number of successful extensions: 70996 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68061 Number of HSP's gapped (non-prelim): 2929 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
