>DNAA_VIBCH (Q9KVX6) Chromosomal replication initiator protein dnaA|
          Length = 467

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 437 APRPAPPRME-DLRAENRDFWPSARAPRKPSHRWWKD 330
           AP+PAP R   D+ AE+    P+  A RKP H+ W D
Sbjct: 85  APKPAPVRTAADVAAESSA--PAQLAQRKPIHKTWDD 119

>LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 470

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 416 RMEDLRAENRDFWPSARAPRKPSHRWW 336
           R+EDLRA   +    AR+PR  S RWW
Sbjct: 353 RIEDLRAA-AEVAKGARSPRASSRRWW 378

>DNAA_VIBPA (Q87TQ7) Chromosomal replication initiator protein dnaA|
          Length = 468

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 440 TAPRPAPPRME-DLRAENRDFWPSARAPRKPSHRWWKD 330
           +AP+PAP R   D+ AE+    P+    RKP H+ W D
Sbjct: 84  SAPKPAPTRTPADVAAESSA--PAQLQARKPVHKTWDD 119

>DNAA_VIBVY (Q7MQJ7) Chromosomal replication initiator protein dnaA|
          Length = 468

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 437 APRPAPPRME-DLRAENRDFWPSARAPRKPSHRWWKD 330
           AP+PAP R   D+ AE+    P+    RKP H+ W D
Sbjct: 85  APKPAPTRTPADVAAESSA--PAQLQARKPVHKTWDD 119

>DNAA_VIBVU (Q8DDI9) Chromosomal replication initiator protein dnaA|
          Length = 468

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 437 APRPAPPRME-DLRAENRDFWPSARAPRKPSHRWWKD 330
           AP+PAP R   D+ AE+    P+    RKP H+ W D
Sbjct: 85  APKPAPTRTPADVAAESSA--PAQLQARKPVHKTWDD 119

>DNAA_VIBHA (P49996) Chromosomal replication initiator protein dnaA|
          Length = 468

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 437 APRPAPPRME-DLRAENRDFWPSARAPRKPSHRWWKD 330
           AP+PAP R   D+ AE+    P+    RKP H+ W D
Sbjct: 85  APKPAPTRTPADVAAESSA--PAQLQARKPVHKTWDD 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,121,746
Number of Sequences: 219361
Number of extensions: 297114
Number of successful extensions: 886
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)