Clone Name | bart26f10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y4597_ARATH (P0C042) Hypothetical protein At4g15970 | 119 | 6e-27 | 2 | HEMN_AQUAE (O67886) Oxygen-independent coproporphyrinogen III ox... | 30 | 6.0 | 3 | RGS14_HUMAN (O43566) Regulator of G-protein signaling 14 (RGS14) | 29 | 7.8 | 4 | MYO3A_MOUSE (Q8K3H5) Myosin IIIA (EC 2.7.11.1) | 29 | 7.8 |
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>Y4597_ARATH (P0C042) Hypothetical protein At4g15970| Length = 367 Score = 119 bits (298), Expect = 6e-27 Identities = 56/112 (50%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Frame = +3 Query: 189 QTATADRTVIMTQINAAWTKPGSLLDLFFESFRTGEGGVARLLDHLVIVTMDPAAYAGCQ 368 + AT D+TVI+T +N AW++P S DLF SF G+G LL HLV+ +D AY+ C Sbjct: 48 EAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGKG-TKPLLRHLVVACLDEEAYSRCS 106 Query: 369 LVHRH-CYFLRTTGVDYRGEKFFMSKDYLEMMWGRNKFQQTILELGYXFLFT 521 VH H CYF++T G+D+ G+K FM+ DYL+MMW R +F T+L+L Y F+FT Sbjct: 107 EVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIEFLGTLLKLRYNFIFT 158
>HEMN_AQUAE (O67886) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 456 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +3 Query: 105 IYLHSKHPSAGSNHLLSQERSARRWRNQQTATADRTVIMTQINAAWTKPGSLLDLFFESF 284 +Y+ H + + L +R WRN Q T + V + A T G L D +F+++ Sbjct: 283 VYIGMDHFAKPEDELAVAQRKGELWRNFQGYTTKKGVELLGFGA--TSIGMLYDSYFQNW 340 Query: 285 RT 290 +T Sbjct: 341 KT 342
>RGS14_HUMAN (O43566) Regulator of G-protein signaling 14 (RGS14)| Length = 594 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 56 STPCRANSQPHRYLSIYLPPQQASLGRIKPSIISRALCTPVAQ 184 ST + S+P +Y +YLP ASL +P + R + + + Sbjct: 291 STEGESESRPGKYCCVYLPDGTASLALARPGLTIRDMLAGICE 333
>MYO3A_MOUSE (Q8K3H5) Myosin IIIA (EC 2.7.11.1)| Length = 1613 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/54 (25%), Positives = 28/54 (51%) Frame = +3 Query: 72 PIPSRIAIYLSIYLHSKHPSAGSNHLLSQERSARRWRNQQTATADRTVIMTQIN 233 P+P + ++ +HSK+ S+ L ++R A ++NQ+ ++ V T N Sbjct: 1336 PVPQAQEEHKAVSIHSKYQSSKKKQQLGKDRLAPPFKNQKILSSSTEVAKTTHN 1389 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,618,821 Number of Sequences: 219361 Number of extensions: 974741 Number of successful extensions: 3137 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3134 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)