>PIRL_LYCES (Q9SEE4) Pirin-like protein|
          Length = 291

 Score =  103 bits (256), Expect = 4e-22
 Identities = 47/76 (61%), Positives = 58/76 (76%)
 Frame = +3

Query: 333 RSRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFE 512
           R R VV+K +   +  GDG  +RRSIGRPELQ+LDPF+ LDEF  S+PAGF DHPHRGFE
Sbjct: 9   RPRLVVKKVLARAQNEGDGAIVRRSIGRPELQNLDPFLMLDEFSVSQPAGFPDHPHRGFE 68

Query: 513 NVTYMLEGGLSYHDFS 560
            VTYML+G  ++ DF+
Sbjct: 69  TVTYMLQGAFTHQDFA 84

>PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120|
          Length = 296

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = +3

Query: 336 SRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFEN 515
           SR V++K   + +  GDG  +RR I R E + LDPF+ LDEF  S PAGF DHPHRGFE 
Sbjct: 11  SRPVIKKVFAKLQKEGDGAVVRRGISRSEQKLLDPFLMLDEFSVSPPAGFPDHPHRGFET 70

Query: 516 VTYMLEGGLSYHDF 557
           VTY+LEGG+++ DF
Sbjct: 71  VTYVLEGGITHQDF 84

>PIR_HUMAN (O00625) Pirin|
          Length = 290

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 39/73 (53%), Positives = 50/73 (68%)
 Frame = +3

Query: 336 SRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFEN 515
           S+ V    +   +  G G  +RRSIGRPEL++LDPF+  DEF+  RP GF DHPHRGFE 
Sbjct: 4   SKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFET 63

Query: 516 VTYMLEGGLSYHD 554
           V+Y+LEGG   H+
Sbjct: 64  VSYLLEGGSMAHE 76

>PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590|
          Length = 310

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 42/79 (53%), Positives = 50/79 (63%)
 Frame = +3

Query: 318 KHPVRRSRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHP 497
           K     +R VV+K    +   G G  +RRSIGR E +  DPF+ LDEF  S PAGF DHP
Sbjct: 6   KSSATNTRLVVKKLFARQLHEGFGAVVRRSIGRFEFRYFDPFLVLDEFSVSAPAGFPDHP 65

Query: 498 HRGFENVTYMLEGGLSYHD 554
           HRGFE VTYMLEG + + D
Sbjct: 66  HRGFETVTYMLEGEILHED 84

>PIR_MOUSE (Q9D711) Pirin|
          Length = 290

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = +3

Query: 336 SRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFEN 515
           S+ V    +   +  G G  +RRSIGRPEL++LDPF+  DEF+  +P GF DHPHRGFE 
Sbjct: 4   SKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDEFKGGKPGGFPDHPHRGFET 63

Query: 516 VTYMLEGGLSYHD 554
           V+Y+LEGG   H+
Sbjct: 64  VSYLLEGGSMAHE 76

>PRN1_ARATH (Q9LX49) Pirin 1 (AtPirin1)|
          Length = 287

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 35/72 (48%), Positives = 50/72 (69%)
 Frame = +3

Query: 339 RAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFENV 518
           R V++K + + +  G+G  +R  I + + + LDPF+ L EF FS  AGF DHPHRGFE+V
Sbjct: 10  RIVIKKVLAKLEKEGEGAVVRNGITKIDQKLLDPFVLLVEFSFSLSAGFPDHPHRGFESV 69

Query: 519 TYMLEGGLSYHD 554
           TYML+GG+ + D
Sbjct: 70  TYMLQGGIIHKD 81

>Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240|
          Length = 285

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
 Frame = +3

Query: 381 GDGFALRRSIGRPELQSLDPFISLDEFEFSRP----AGFSDHPHRGFENVTYMLEGGLSY 548
           G G  L R IG P  +  DPF+ LD+F+   P    AGF  HPHRGFE VTYMLEG + +
Sbjct: 19  GAGVRLTRVIGGPSPERFDPFLMLDQFDTQNPDDYVAGFPSHPHRGFETVTYMLEGRMRH 78

Query: 549 HD 554
            D
Sbjct: 79  ED 80

>PIRL4_ARATH (Q9LX45) Putative pirin-like protein At3g59260|
          Length = 271

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +3

Query: 399 RRSIGRPELQSLDPFISLDEFEFSRPAGFSDHPHRGFENVTYMLEGGLSYHD 554
           + S  + + + LDPF+SL EF  S P GF DHPHRGFE+VTYM +GG+ + D
Sbjct: 10  KASPSKSDHELLDPFVSLVEFSVSPPGGFKDHPHRGFESVTYMFQGGIIHQD 61

>Y481_CAUCR (P58112) Hypothetical protein CC0481|
          Length = 276

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
 Frame = +3

Query: 381 GDGFALRRSIGRPELQSLDPFISLDEFEFSRPA----GFSDHPHRGFENVTYMLEGGLSY 548
           G G  L R +G PE Q  DPF+ LD F+  + +    GF DHPHRGFE VTYMLEG + +
Sbjct: 18  GAGVRLTRMLGTPEAQMFDPFLMLDCFDNDQASDYLGGFPDHPHRGFETVTYMLEGRMRH 77

Query: 549 HD 554
            D
Sbjct: 78  KD 79

>Y3769_VIBCH (Q9KKY1) Hypothetical protein VCA0969|
          Length = 282

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +3

Query: 333 RSRAVVQKFMCERKVVGDGFALRRSIG--RPELQSLDPFISLDEFEFSRPA----GFSDH 494
           + R + Q    +    GDG  ++R  G  RP   +  PF+ LDE +    A    GF  H
Sbjct: 3   KDREIRQTVPAQPTSDGDGVKIQRIAGFQRP---NFSPFLMLDELKADSQADYIGGFPPH 59

Query: 495 PHRGFENVTYMLEGGLSYHD 554
           PHRG E +TYML+G   + D
Sbjct: 60  PHRGIETLTYMLQGHFQHRD 79

>Y2418_PSEAE (Q9I163) Hypothetical protein PA2418|
          Length = 286

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
 Frame = +3

Query: 369 RKVVGDGFALRRSIGRPEL-QSLDPFISLDEFEFSRPAGF---------SDHPHRGFENV 518
           R  VGDGF +R       L Q + PF+ LD   ++ PA F           HPHRGFE V
Sbjct: 13  RHWVGDGFPVRSLFSYNTLGQHISPFLLLD---YAGPADFPPAQQRRGVGQHPHRGFETV 69

Query: 519 TYMLEGGLSYHD 554
           T + +G + +HD
Sbjct: 70  TIVYQGEVEHHD 81

>Y1210_PSEAE (Q9I4C8) Hypothetical protein PA1210|
          Length = 232

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 462 EFSRPAGFSDHPHRGFENVTYMLEGGLSYHD 554
           E +  +GF  HPHR  E +TY+ EG +++ D
Sbjct: 47  EIAAGSGFPPHPHRDMEIITYVREGAITHQD 77

>Y1337_ZYMMO (Q9XBR7) Hypothetical protein ZMO1337|
          Length = 235

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 480 GFSDHPHRGFENVTYMLEGGLSYHD 554
           GF  HPH+  E VTY+ EG L++ D
Sbjct: 53  GFGMHPHKDMEIVTYIREGALTHED 77

>Y187_MYCBO (P65725) Hypothetical protein Mb0187c|
          Length = 244

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 477 AGFSDHPHRGFENVTYMLEGGLSYHD 554
           +GF  HPHR  E VT++L G L + D
Sbjct: 55  SGFDPHPHRDMEIVTWVLRGALRHQD 80

>Y181_MYCTU (P65724) Hypothetical protein Rv0181c/MT0190|
          Length = 244

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 477 AGFSDHPHRGFENVTYMLEGGLSYHD 554
           +GF  HPHR  E VT++L G L + D
Sbjct: 55  SGFDPHPHRDMEIVTWVLRGALRHQD 80

>Y133_THEAC (Q9HLU2) Hypothetical protein Ta0133|
          Length = 261

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 480 GFSDHPHRGFENVTYMLEGGLSYHD 554
           GF  HPHRG E +TY ++G   + D
Sbjct: 13  GFPWHPHRGIETITYQIKGKTFHED 37

>YHHW_ECOLI (P46852) Protein yhhW|
          Length = 231

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 480 GFSDHPHRGFENVTYMLEGGLSYHD 554
           GF  HPH+  E +TY+LEG + + D
Sbjct: 53  GFGTHPHKDMEILTYVLEGTVEHQD 77

>YHHW_ECO57 (P58116) Protein yhhW|
          Length = 231

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 480 GFSDHPHRGFENVTYMLEGGLSYHD 554
           GF  HPH+  E +TY+LEG + + D
Sbjct: 53  GFGTHPHKDMEILTYVLEGTVEHQD 77

>Y3178_CAUCR (P58114) Hypothetical protein CC3178|
          Length = 288

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
 Frame = +3

Query: 357 FMCERKVVGDGFALRRSIGRPELQSLDPFISLDEFE-------FSRPAGFSDHPHRGFEN 515
           F   RK +G+ F + R +     + + PF  LD          F + A    HPH G   
Sbjct: 6   FDARRKDLGN-FEVGRVLPFHAHRMVGPFTFLDHMGPAAFQPGFPKSADVRPHPHIGLST 64

Query: 516 VTYMLEGGLSYHD 554
           +TY+ EG +++ D
Sbjct: 65  LTYLFEGEITHRD 77

>Y1773_SYNY3 (P73623) Hypothetical protein sll1773|
          Length = 232

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 480 GFSDHPHRGFENVTYMLEGGLSYHD 554
           GF+ H H+  E VTY+LEG L + D
Sbjct: 53  GFATHGHKDMEIVTYVLEGELEHKD 77

>Y1473_CAUCR (P58113) Hypothetical protein CC1473|
          Length = 232

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 462 EFSRPAGFSDHPHRGFENVTYMLEGGLSYHD 554
           E +   GF  HPH   E +TY+ +G +++ D
Sbjct: 47  EIAPNTGFPPHPHSDMEIITYVRDGAITHQD 77

>Y1205_PSEAE (Q9I4D3) Hypothetical protein PA1205|
          Length = 315

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
 Frame = +3

Query: 333 RSRAVVQKFMCERKVVGDGFALRRSIGRPELQSLDPFISLD-----EFEFSRPAGFSDHP 497
           R   ++Q+       +G G  + R +   + + +  +  LD     EFE         HP
Sbjct: 19  RHEHLLQRVTARAAEIGGGITVSRLMPSRQRRMIGAWCFLDHAGPAEFEPGGGLAVGPHP 78

Query: 498 HRGFENVTYMLEGGLSYHD 554
           H G +  T+M++G   + D
Sbjct: 79  HIGLQTFTWMIQGEALHRD 97

>Y1685_PASMU (Q9CKD7) Hypothetical protein PM1685|
          Length = 233

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 480 GFSDHPHRGFENVTYMLEGGLSYHD 554
           GF  HPH+  E +TY+L G + + D
Sbjct: 55  GFDMHPHQDMEILTYILSGTIEHQD 79

>RSP4_CHLRE (Q01656) Flagellar radial spoke protein 4|
          Length = 465

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 449 GDERIQALQLRPANAPPESEAVAD 378
           G+   Q L+L+PA  PPE EA AD
Sbjct: 441 GEVETQELELKPAPPPPEEEAEAD 464


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,051,829
Number of Sequences: 219361
Number of extensions: 930326
Number of successful extensions: 2778
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2776
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)