Clone Name | bart26e02 |
---|---|
Clone Library Name | barley_pub |
>DCE_PETHY (Q07346) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 500 Score = 194 bits (493), Expect = 1e-49 Identities = 94/101 (93%), Positives = 98/101 (97%), Gaps = 2/101 (1%) Frame = +2 Query: 224 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 403 TFASRYVR SLPR++MP+NSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KLM Sbjct: 17 TFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLM 76 Query: 404 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL--GET 520 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL GET Sbjct: 77 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGET 117
>DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)| Length = 502 Score = 191 bits (486), Expect = 8e-49 Identities = 91/98 (92%), Positives = 95/98 (96%) Frame = +2 Query: 224 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 403 TFASRYVR SLPR++MPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KL+ Sbjct: 17 TFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLI 76 Query: 404 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGE 517 M SINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL E Sbjct: 77 MSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEE 114
>DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (ERT D1)| Length = 502 Score = 177 bits (450), Expect = 1e-44 Identities = 80/98 (81%), Positives = 94/98 (95%) Frame = +2 Query: 224 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 403 TFASRYV+ LP+++MP+ S+PKEAAYQI+NDELMLDGNPRLNLASFV+TWMEPEC+KL+ Sbjct: 18 TFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLI 77 Query: 404 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGE 517 M SINKNYVDMDEYPVTTELQNRCVNM+AHLF+AP+G+ Sbjct: 78 MSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGD 115
>DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Length = 494 Score = 176 bits (446), Expect = 3e-44 Identities = 83/98 (84%), Positives = 91/98 (92%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F SRYVR +LP+Y + ENSIPK+AAYQII DELMLDGNPRLNLASFVTTWMEPEC+KL+M Sbjct: 17 FGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIM 76 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGET 520 DSINKNYVDMDEYPVTTELQNRCVN+IA LFNAPL E+ Sbjct: 77 DSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEES 114
>DCE_LACLC (O30418) Glutamate decarboxylase (EC 4.1.1.15)| Length = 466 Score = 105 bits (262), Expect = 8e-23 Identities = 48/93 (51%), Positives = 66/93 (70%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F S + LP+Y++ + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM Sbjct: 18 FGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMS 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNA 505 ++ KN +D EYP TTE++NRCVNMIA L+NA Sbjct: 78 QTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA 110
>DCE_LACLA (Q9CG20) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 466 Score = 105 bits (262), Expect = 8e-23 Identities = 48/93 (51%), Positives = 66/93 (70%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F S + LP+Y++ + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM Sbjct: 18 FGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMS 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNA 505 ++ KN +D EYP TTE++NRCVNMIA L+NA Sbjct: 78 QTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA 110
>DCEC_LISMO (Q8Y4K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)| (GAD-gamma) Length = 467 Score = 93.6 bits (231), Expect = 3e-19 Identities = 43/94 (45%), Positives = 62/94 (65%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F S S+P+Y + + + AYQ++ D+LM +GN R NLA+F T+ME E LM Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMA 78 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 +++ KN +D EYP T EL+NRCVN++A L+NAP Sbjct: 79 ETLEKNAIDKSEYPQTAELENRCVNILADLWNAP 112
>DCEC_LISIN (Q928K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)| (GAD-gamma) Length = 467 Score = 93.6 bits (231), Expect = 3e-19 Identities = 43/94 (45%), Positives = 62/94 (65%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F S S+P+Y + + + AYQ++ D+LM +GN R NLA+F T+ME E LM Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMA 78 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 +++ KN +D EYP T EL+NRCVN++A L+NAP Sbjct: 79 ETLEKNAIDKSEYPQTAELENRCVNILADLWNAP 112
>DCEB_LISIN (Q928R9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 464 Score = 90.1 bits (222), Expect = 3e-18 Identities = 41/94 (43%), Positives = 62/94 (65%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F S +P+Y + + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM Sbjct: 16 FGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMS 75 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 +++ KN +D EYP T EL+NRCVN+IA L++AP Sbjct: 76 ETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP 109
>DCEB_LISMO (Q9EYW9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 464 Score = 89.7 bits (221), Expect = 4e-18 Identities = 41/94 (43%), Positives = 62/94 (65%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F S +P+Y + + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM Sbjct: 16 FGSSAEDRDIPKYTLGKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMS 75 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 +++ KN +D EYP T EL+NRCVN+IA L++AP Sbjct: 76 ETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP 109
>DCEB_SHIFL (P69912) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEB_ECOLI (P69910) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEB_ECOL6 (Q8FHG5) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEB_ECO57 (P69911) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEA_SHIFL (Q83PR1) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEA_ECOLI (P69908) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEA_ECOL6 (P69909) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCEA_ECO57 (P58228) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/94 (45%), Positives = 61/94 (64%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 406 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 407 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAP 508 SINKN++D +EYP + + RCVNM+A L++AP Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAP 111
>DCE_YEAST (Q04792) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 585 Score = 87.4 bits (215), Expect = 2e-17 Identities = 38/82 (46%), Positives = 58/82 (70%) Frame = +2 Query: 260 RYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYVDMD 439 +Y +P+ +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ +++ KN D D Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADND 118 Query: 440 EYPVTTELQNRCVNMIAHLFNA 505 EYP EL RC++M+A L++A Sbjct: 119 EYPQLIELTQRCISMLAQLWHA 140
>DCEA_LISMO (Q9F5P3) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 462 Score = 85.1 bits (209), Expect = 1e-16 Identities = 38/88 (43%), Positives = 59/88 (67%) Frame = +2 Query: 254 LPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYVD 433 LP RM + S+ AYQ++ D+L+ +G+ R NLA+F T+MEPE ++M +++ KN +D Sbjct: 23 LPEKRMNKESVDPRIAYQLVKDQLIDEGSARQNLATFCQTYMEPEAEQIMAETMEKNAID 82 Query: 434 MDEYPVTTELQNRCVNMIAHLFNAPLGE 517 EYP T +L++ CVNM+A L+N E Sbjct: 83 KSEYPQTAKLESSCVNMLADLWNVDESE 110
>NUAK1_HUMAN (O60285) NUAK family, SNF1-like kinase 1 (EC 2.7.11.1)| (AMPK-related protein kinase 5) Length = 661 Score = 32.3 bits (72), Expect = 0.81 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = +1 Query: 256 AKVPDAGELDPQGSGVPDHQRRADAGREPAAEP----GVLRHHLDGARVQQAHDGLHQQE 423 A P AG+ G G P R A AG A EP GV RHH H+ H+ E Sbjct: 4 AAAPVAGDRPDLGLGAPGSPREAVAGATAALEPRKPHGVKRHH-------HKHNLKHRYE 56 Query: 424 LRR------HGRVPR 450 L+ +G+V R Sbjct: 57 LQETLGKGTYGKVKR 71
>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)| Length = 824 Score = 31.2 bits (69), Expect = 1.8 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = +2 Query: 227 FASRYVRASLPRYRMPENSIPKEA-AYQIINDELMLDGNPRLNLASFVTTW---MEPE-C 391 FA+ +++L + +PKE+ Y +I G L L +F +W ++P+ Sbjct: 714 FANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNF--SWAMDLDPKGA 771 Query: 392 NKLMMDSINKNYVDMDEYPVTTELQ 466 N + ++I+K Y+ DE P+T E Q Sbjct: 772 NNQIKEAIDKRYLPDDEEPITQEEQ 796
>Y616_FRATT (Q5NH55) UPF0054 protein FTT0616c| Length = 168 Score = 31.2 bits (69), Expect = 1.8 Identities = 12/34 (35%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = +2 Query: 395 KLMMDSINKNYVDMDEYPV-TTELQNRCVNMIAH 493 KL MD++N N+++ DE+P+ + +L +C+ ++A+ Sbjct: 4 KLKMDNLNINFINDDEHPIPSQDLLLKCLQLVAN 37
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 30.4 bits (67), Expect = 3.1 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +1 Query: 307 DH--QRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPMRE 480 DH +RR+ A R P+ G H+ D R + DG H R R+H PE R Sbjct: 286 DHSTRRRSYADRSPSPRRG--NHYYDRRRTEDRSDGYH--------RDSRNHDRPEFYRG 335 Query: 481 HDR 489 +DR Sbjct: 336 NDR 338
>ITA5_BOVIN (Q27977) Integrin alpha-5 (Fibronectin receptor alpha subunit)| (Integrin alpha-F) (VLA-5) (CD49e antigen) (Fragment) Length = 385 Score = 30.4 bits (67), Expect = 3.1 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = +1 Query: 265 PDAGELDPQGSGVPDHQRRADAGREPAAE-PGVLR-HHLDGARVQQAHDGLHQQELRRHG 438 P+ ELDP+GS QRR GR PA+ P +L+ + +++ LH+QE R Sbjct: 234 PEGLELDPEGSQHHRLQRRMFLGRSPASSGPQILKCPEAECFKLRCELGPLHRQESRSLQ 293 Query: 439 RVPRHHRAPEPMREHDRASLQ 501 R REH SLQ Sbjct: 294 LHFRVWAKAFLQREHQPFSLQ 314
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 5.3 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 391 QQAHDGLHQQELRRHGRVPRHHRAPEPMREHDRASLQR 504 QQ H QQ+ ++H + +HH+ +P ++H Q+ Sbjct: 203 QQQHHQQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQ 240
>LPQT_MYCBO (Q7U0V0) Putative lipoprotein lpqT precursor| Length = 252 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 331 GREPAAEPGVLRHHLDGARVQQA---HDGLHQQELRRHGRV 444 G AA PG HH G R +QA H G H++ +RR G+V Sbjct: 186 GAGQAALPGAAHHHESGQRGRQARFRHRGDHRR-IRRRGKV 225
>TLK1_CAEEL (P34314) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) Length = 965 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/71 (21%), Positives = 31/71 (43%) Frame = +1 Query: 304 PDHQRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPMREH 483 P Q + + ++P L+H + + + A + +E +HG P+ AP+ Sbjct: 211 PQQQSQQQSAQQPQQSSAALQHVNESSNLSSA-GSISDREPEQHGGTPQRPTAPQSSTAT 269 Query: 484 DRASLQRSSWG 516 D+ + +R G Sbjct: 270 DKKTRKRRKAG 280
>ODB2_BACSU (P37942) Lipoamide acyltransferase component of branched-chain| alpha-keto acid dehydrogenase complex (EC 2.3.1.168) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) (E2) (Dihydrolipoamide branched chain transacylase) Length = 424 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -2 Query: 158 AGGEDGRSDRRWGPAVLASADAAGFVLDQQTRGSGSSALPRK 33 AG D + +R+ PAVL A G LDQ T + RK Sbjct: 106 AGAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRK 147
>GATA3_CHICK (P23825) GATA-binding factor 3 (GATA-3) (Transcription factor| NF-E1C) Length = 444 Score = 28.9 bits (63), Expect = 9.0 Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 13/92 (14%) Frame = +1 Query: 280 LDPQGSGVPDHQR---RADAGREPAAEPGV------LRHH----LDGARVQQAHDGLHQQ 420 +D QG+ VP + RA R P A G L H LDG++ +H Sbjct: 53 IDGQGNPVPPYYGNSVRATVQRYPTAHHGSQVCRPPLLHGSLPWLDGSKALSSHHSASPW 112 Query: 421 ELRRHGRVPRHHRAPEPMREHDRASLQRSSWG 516 L + HH +P P+ + AS S G Sbjct: 113 NLSPFSKTSIHHSSPGPLSVYPPASSSTLSAG 144
>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)| Length = 161 Score = 28.9 bits (63), Expect = 9.0 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Frame = +1 Query: 262 VPDAGELDPQGSGVPDHQRRADAG------REPAA----EPGVLRHHLDGARVQQAHDGL 411 VP AG + P+G P R +G + AA + G+LR D + + + + Sbjct: 22 VPSAG-MHPRGVHAPRGHPRMISGPPQRGDNDQAAGQCGDSGLLRVGAD-TTISKPSEAV 79 Query: 412 HQQELRRHGRVPRHHRAPEPMREHDRASLQRSS 510 + R RVPR R P P RE + R+S Sbjct: 80 RPPTIPRTPRVPREPRVPRPPREPREPRVPRAS 112 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,418,528 Number of Sequences: 219361 Number of extensions: 1093272 Number of successful extensions: 3918 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3911 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)