>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  113 bits (57), Expect = 6e-22
 Identities = 128/151 (84%), Gaps = 3/151 (1%)
 Strand = Plus / Plus

                                                                            
Query: 395      ggagcatgaccggcgccgcgcgcgcgctcaggggcctccagttcctcaaccagagcgtgg 454
                ||||||||||||||||||| ||||||||  | || |||||||||||||||   ||||  |
Sbjct: 21682795 ggagcatgaccggcgccgcccgcgcgctgcgcgggctccagttcctcaactccagcgccg 21682854

                                                                            
Query: 455      tcacgcagggcagctggcccgaggtggagaagcggttcgaccgcctcgccgtcaacggcc 514
                ||||  | |||   ||||| |||||||||||| ||||||| |||||||||||| ||||| 
Sbjct: 21682855 tcaccaatggc---tggccggaggtggagaagaggttcgagcgcctcgccgtcgacggct 21682911

                                               
Query: 515      tgctcctccgctcacgcttcggccagtgcat 545
                | ||||||||||| |||||||||||||||||
Sbjct: 21682912 tcctcctccgctcccgcttcggccagtgcat 21682942



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                            
Query: 171      gagcgcgagccggcgaagcacgcggttcaaggaggagaacgcgtacgtggaggtcacgct 230
                |||| |||||||||| |||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 21682466 gagctcgagccggcggagcacgcggttcaaggaggacaacgagtacgtggagatcacgct 21682525

                                                     
Query: 231      ggacgtcagggccgacgacgcggtggccgtccagagc 267
                 ||||||| || ||||||| |||| ||| ||||||||
Sbjct: 21682526 cgacgtcaagggcgacgacacggtcgccatccagagc 21682562

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  113 bits (57), Expect = 6e-22
 Identities = 128/151 (84%), Gaps = 3/151 (1%)
 Strand = Plus / Plus

                                                                            
Query: 395      ggagcatgaccggcgccgcgcgcgcgctcaggggcctccagttcctcaaccagagcgtgg 454
                ||||||||||||||||||| ||||||||  | || |||||||||||||||   ||||  |
Sbjct: 21611140 ggagcatgaccggcgccgcccgcgcgctgcgcgggctccagttcctcaactccagcgccg 21611199

                                                                            
Query: 455      tcacgcagggcagctggcccgaggtggagaagcggttcgaccgcctcgccgtcaacggcc 514
                ||||  | |||   ||||| |||||||||||| ||||||| |||||||||||| ||||| 
Sbjct: 21611200 tcaccaatggc---tggccggaggtggagaagaggttcgagcgcctcgccgtcgacggct 21611256

                                               
Query: 515      tgctcctccgctcacgcttcggccagtgcat 545
                | ||||||||||| |||||||||||||||||
Sbjct: 21611257 tcctcctccgctcccgcttcggccagtgcat 21611287



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                            
Query: 171      gagcgcgagccggcgaagcacgcggttcaaggaggagaacgcgtacgtggaggtcacgct 230
                |||| |||||||||| |||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 21610811 gagctcgagccggcggagcacgcggttcaaggaggacaacgagtacgtggagatcacgct 21610870

                                                     
Query: 231      ggacgtcagggccgacgacgcggtggccgtccagagc 267
                 ||||||| || ||||||| |||| ||| ||||||||
Sbjct: 21610871 cgacgtcaagggcgacgacacggtcgccatccagagc 21610907

>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  113 bits (57), Expect = 6e-22
 Identities = 128/151 (84%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                          
Query: 395    ggagcatgaccggcgccgcgcgcgcgctcaggggcctccagttcctcaaccagagcgtgg 454
              ||||||||||||||||||| ||||||||  | || |||||||||||||||   ||||  |
Sbjct: 129756 ggagcatgaccggcgccgcccgcgcgctgcgcgggctccagttcctcaactccagcgccg 129697

                                                                          
Query: 455    tcacgcagggcagctggcccgaggtggagaagcggttcgaccgcctcgccgtcaacggcc 514
              ||||  | |||   ||||| |||||||||||| ||||||| |||||||||||| ||||| 
Sbjct: 129696 tcaccaatggc---tggccggaggtggagaagaggttcgagcgcctcgccgtcgacggct 129640

                                             
Query: 515    tgctcctccgctcacgcttcggccagtgcat 545
              | ||||||||||| |||||||||||||||||
Sbjct: 129639 tcctcctccgctcccgcttcggccagtgcat 129609



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                          
Query: 171    gagcgcgagccggcgaagcacgcggttcaaggaggagaacgcgtacgtggaggtcacgct 230
              |||| |||||||||| |||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 130085 gagctcgagccggcggagcacgcggttcaaggaggacaacgagtacgtggagatcacgct 130026

                                                   
Query: 231    ggacgtcagggccgacgacgcggtggccgtccagagc 267
               ||||||| || ||||||| |||| ||| ||||||||
Sbjct: 130025 cgacgtcaagggcgacgacacggtcgccatccagagc 129989

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 398     gcatgaccggcgccgcgcgcgcgc 421
               ||||||||||||||||||||||||
Sbjct: 2355888 gcatgaccggcgccgcgcgcgcgc 2355911

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 267     cgtcagggccgccggcgagacgcccgacacggcgctgct 305
               ||||| ||| ||||||| ||||| |||||||||||||||
Sbjct: 3696493 cgtcaaggctgccggcgtgacgctcgacacggcgctgct 3696531

>ref|NM_124165.2| Arabidopsis thaliana RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D)
           AT5G47910 (RBOHD) mRNA, complete cds
          Length = 3201

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/51 (86%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                              
Query: 213 gtacgtggaggtcacgctggacgtcagggccgacgacgcggtggccgtcca 263
           |||||||||| ||||||| ||| ||||||   ||||| |||||||||||||
Sbjct: 367 gtacgtggagatcacgctagacatcaggg---acgactcggtggccgtcca 414

>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1
             Contains the MGAT3 gene for mannosyl
             (beta-1,4-)-glycoprotein
             beta-1,4-N-acetylglucosaminyltransferase, the gene for a
             predicted protein, the ATF4 gene for activating
             transcription factor 4 (tax-responsive enhancer element
             B67) and the 5' end of the CACNA1I gene for
             voltage-dependent calcium channel, alpha 1I subunit.
             Contains ESTs, STSs, GSSs and five putative CpG islands,
             complete sequence
          Length = 112460

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 290   ccgacacggcgctgctgcccc 310
             |||||||||||||||||||||
Sbjct: 60451 ccgacacggcgctgctgcccc 60431

>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 291     cgacacggcgctgctgccccg 311
               |||||||||||||||||||||
Sbjct: 2139011 cgacacggcgctgctgccccg 2138991

>gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, complete sequence
          Length = 137075

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    gctcaggggcctccagttcct 440
              |||||||||||||||||||||
Sbjct: 102220 gctcaggggcctccagttcct 102240

>dbj|AK054601.1| Homo sapiens cDNA FLJ30039 fis, clone 3NB692001519
          Length = 1570

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 290 ccgacacggcgctgctgcccc 310
           |||||||||||||||||||||
Sbjct: 296 ccgacacggcgctgctgcccc 316

>gb|AF424625.1|AF424625 Arabidopsis thaliana AT5g47910/MCA23_25 mRNA, complete cds
          Length = 2999

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/51 (86%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                              
Query: 213 gtacgtggaggtcacgctggacgtcagggccgacgacgcggtggccgtcca 263
           |||||||||| ||||||| ||| ||||||   ||||| |||||||||||||
Sbjct: 367 gtacgtggagatcacgctagacatcaggg---acgactcggtggccgtcca 414

>gb|BT002651.1| Arabidopsis thaliana At5g47910/MCA23_25 gene, complete cds
          Length = 2766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/51 (86%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                              
Query: 213 gtacgtggaggtcacgctggacgtcagggccgacgacgcggtggccgtcca 263
           |||||||||| ||||||| ||| ||||||   ||||| |||||||||||||
Sbjct: 225 gtacgtggagatcacgctagacatcaggg---acgactcggtggccgtcca 272

>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23
          Length = 82503

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/51 (86%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                                
Query: 213   gtacgtggaggtcacgctggacgtcagggccgacgacgcggtggccgtcca 263
             |||||||||| ||||||| ||| ||||||   ||||| |||||||||||||
Sbjct: 75042 gtacgtggagatcacgctagacatcaggg---acgactcggtggccgtcca 75089

>dbj|AB002388.1| Homo sapiens mRNA for KIAA0390 gene, partial cds
          Length = 4935

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 420  gctcaggggcctccagttcct 440
            |||||||||||||||||||||
Sbjct: 3506 gctcaggggcctccagttcct 3526

>gb|AF055357.1|AF055357 Arabidopsis thaliana respiratory burst oxidase protein D (RbohD)
           mRNA, complete cds
          Length = 3035

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 44/51 (86%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                              
Query: 213 gtacgtggaggtcacgctggacgtcagggccgacgacgcggtggccgtcca 263
           |||||||||| ||||||| ||| ||||||   ||||| |||||||||||||
Sbjct: 356 gtacgtggagatcacgctagacatcaggg---acgactcggtggccgtcca 403

>ref|NM_014717.1| Homo sapiens zinc finger protein 536 (ZNF536), mRNA
          Length = 4935

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 420  gctcaggggcctccagttcct 440
            |||||||||||||||||||||
Sbjct: 3506 gctcaggggcctccagttcct 3526

>ref|NM_190148.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 cggcgccgcgcgcgcgctca 424
           ||||||||||||||||||||
Sbjct: 301 cggcgccgcgcgcgcgctca 282

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 358     gcgtccgcgaagccggtgag 377
               ||||||||||||||||||||
Sbjct: 1041185 gcgtccgcgaagccggtgag 1041166

>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence
          Length = 221860

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   gcctccagttcctcaaccag 447
             ||||||||||||||||||||
Sbjct: 71246 gcctccagttcctcaaccag 71227

>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    ggagaagcggttcgaccgcc 499
              ||||||||||||||||||||
Sbjct: 248711 ggagaagcggttcgaccgcc 248692

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 261     ccagagcgtcagggccgccggcga 284
               ||||||||| ||||||||||||||
Sbjct: 3592436 ccagagcgtaagggccgccggcga 3592459

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 404      ccggcgccgcgcgcgcgctc 423
                ||||||||||||||||||||
Sbjct: 11862986 ccggcgccgcgcgcgcgctc 11863005

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 405      cggcgccgcgcgcgcgctca 424
                ||||||||||||||||||||
Sbjct: 38152652 cggcgccgcgcgcgcgctca 38152671

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 463    ggcagctggcccgaggtggagaag 486
              |||||||||||||||| |||||||
Sbjct: 255992 ggcagctggcccgaggaggagaag 256015

>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0471B04
          Length = 138025

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    cggcgccgcgcgcgcgctca 424
              ||||||||||||||||||||
Sbjct: 120686 cggcgccgcgcgcgcgctca 120705

>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0018C10
          Length = 200183

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   cggcgccgcgcgcgcgctca 424
             ||||||||||||||||||||
Sbjct: 71886 cggcgccgcgcgcgcgctca 71905

>gb|DQ163916.1| Bacteriophage M6, complete genome
          Length = 59446

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ggcgcatcgcgtccgcgaag 369
             ||||||||||||||||||||
Sbjct: 58000 ggcgcatcgcgtccgcgaag 57981

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   ccggcgccgcgcgcgcgctc 423
             ||||||||||||||||||||
Sbjct: 44476 ccggcgccgcgcgcgcgctc 44495

>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1506_A04
          Length = 114998

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    ccggcgccgcgcgcgcgctc 423
              ||||||||||||||||||||
Sbjct: 105804 ccggcgccgcgcgcgcgctc 105823

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     ccgacacggcgctgctgccc 309
               ||||||||||||||||||||
Sbjct: 2850926 ccgacacggcgctgctgccc 2850945

>emb|AL669970.10| Human DNA sequence from clone RP11-473E2 on chromosome 9, complete
              sequence
          Length = 169247

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 216    cgtggaggtcacgctggacgtcagggcc 243
              |||||||||||| ||||| |||||||||
Sbjct: 148114 cgtggaggtcactctggaggtcagggcc 148087

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    cctccagttcctcaaccaga 448
              ||||||||||||||||||||
Sbjct: 722599 cctccagttcctcaaccaga 722580

>gb|AY795522.1| Eremococcus turbinatus voucher erem2 18S small subunit ribosomal
           RNA gene, partial sequence
          Length = 587

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 gaccggcgccgcgcgcgcgc 421
           ||||||||||||||||||||
Sbjct: 182 gaccggcgccgcgcgcgcgc 163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,340,271
Number of Sequences: 3902068
Number of extensions: 3340271
Number of successful extensions: 70960
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 69721
Number of HSP's gapped (non-prelim): 1244
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)