ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart26d01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468343.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 246 bits (124), Expect = 7e-62 Identities = 295/352 (83%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 44 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 103 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 || |||| ||||||| |||||| ||||| ||| ||||||| |||||| ||||||| || | Sbjct: 104 tcatccgtggctaccacgtcaggggaacagccagagatcctgctgacagcaagaatgctc 163 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| | |||||||| || || |||||||| | | ||||| ||||||||||||| Sbjct: 164 acctgcttgagctggagggagccgaccagaggctctccctctgccgtgccgacgtcctcg 223 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgc 446 || || ||||| ||||||||||| ||| |||||||||||||| || |||||||| | Sbjct: 224 acgccgccagcctccgcgccgccttcagcgggtgccacggcgtcttccatgtcgcctccc 283 Query: 447 cggtctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatca 506 |||| ||||||||||| ||||| || ||||| || || ||||| || ||||||||||||| Sbjct: 284 cggtgtccaacgaccctgacctggttccggttgcagtggaggggacgaggaacgtgatca 343 Query: 507 gagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 ||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 344 acgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcctacgg 395
>ref|XM_507038.1| PREDICTED Oryza sativa (japonica cultivar-group), P0016F11.25 mRNA Length = 1560 Score = 226 bits (114), Expect = 6e-56 Identities = 290/349 (83%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 210 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 269 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | |||||| ||||||||||| |||| Sbjct: 270 tccgcggctaccgcgtgaggggaacagccagggatccc------cgcaagaacgcccacc 323 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 324 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 383 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 || |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 384 tcgccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 443 Query: 450 tctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagag 509 | ||||| ||||| | || ||||||||||| | ||||| || ||||||||||| | | Sbjct: 444 tgtccaaggaccctaatctggtgccggtcgcgattgaggggacgaggaacgtgatgaagg 503 Query: 510 cggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 504 cggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcgtacgg 552
>ref|XM_468348.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1454 Score = 226 bits (114), Expect = 6e-56 Identities = 290/349 (83%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 212 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 271 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | |||||| ||||||||||| |||| Sbjct: 272 tccgcggctaccgcgtgaggggaacagccagggatccc------cgcaagaacgcccacc 325 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 326 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 385 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 || |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 386 tcgccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 445 Query: 450 tctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagag 509 | ||||| ||||| | || ||||||||||| | ||||| || ||||||||||| | | Sbjct: 446 tgtccaaggaccctaatctggtgccggtcgcgattgaggggacgaggaacgtgatgaagg 505 Query: 510 cggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 506 cggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcgtacgg 554
>dbj|AK063935.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D09, full insert sequence Length = 1560 Score = 226 bits (114), Expect = 6e-56 Identities = 290/349 (83%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 210 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 269 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | |||||| ||||||||||| |||| Sbjct: 270 tccgcggctaccgcgtgaggggaacagccagggatccc------cgcaagaacgcccacc 323 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 324 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 383 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 || |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 384 tcgccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 443 Query: 450 tctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagag 509 | ||||| ||||| | || ||||||||||| | ||||| || ||||||||||| | | Sbjct: 444 tgtccaaggaccctaatctggtgccggtcgcgattgaggggacgaggaacgtgatgaagg 503 Query: 510 cggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 504 cggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcgtacgg 552
>ref|XM_468316.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1428 Score = 222 bits (112), Expect = 1e-54 Identities = 292/352 (82%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 169 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 228 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 || |||| ||||||| |||||| ||||| ||| | ||||| |||||| ||||||| || | Sbjct: 229 tcatccgtggctaccacgtcaggggaacagccagggatcctgctgacagcaagaatgctc 288 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| | |||||||| || || ||||||||| | | ||||||||||||||||||| Sbjct: 289 acctgcttgagctggagggagccgacgagaggctctccctctgccgcgccgacgtcctcg 348 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgc 446 || || ||||| ||||||||||| ||| |||||||||||||| || |||||||| | Sbjct: 349 acgccgccagcctccgcgccgccttcagcgggtgccacggcgtcttccatgtcgcctccc 408 Query: 447 cggtctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatca 506 |||| || |||||||| ||||| || ||||| || || ||||| || ||||||||||||| Sbjct: 409 cggtgtctaacgaccctgaccttgttccggttgcagtggaggggacgaggaacgtgatca 468 Query: 507 gagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 || || |||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 469 acgcagcggcggacatgggcgtgcgccgcgtggtgttcacgtcgtcgtacgg 520
>dbj|AK064401.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H04, full insert sequence Length = 1428 Score = 222 bits (112), Expect = 1e-54 Identities = 292/352 (82%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 169 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 228 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 || |||| ||||||| |||||| ||||| ||| | ||||| |||||| ||||||| || | Sbjct: 229 tcatccgtggctaccacgtcaggggaacagccagggatcctgctgacagcaagaatgctc 288 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| | |||||||| || || ||||||||| | | ||||||||||||||||||| Sbjct: 289 acctgcttgagctggagggagccgacgagaggctctccctctgccgcgccgacgtcctcg 348 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgc 446 || || ||||| ||||||||||| ||| |||||||||||||| || |||||||| | Sbjct: 349 acgccgccagcctccgcgccgccttcagcgggtgccacggcgtcttccatgtcgcctccc 408 Query: 447 cggtctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatca 506 |||| || |||||||| ||||| || ||||| || || ||||| || ||||||||||||| Sbjct: 409 cggtgtctaacgaccctgaccttgttccggttgcagtggaggggacgaggaacgtgatca 468 Query: 507 gagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 || || |||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 469 acgcagcggcggacatgggcgtgcgccgcgtggtgttcacgtcgtcgtacgg 520
>dbj|AK119257.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H06, full insert sequence Length = 1454 Score = 218 bits (110), Expect = 1e-53 Identities = 289/349 (82%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 212 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 271 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | ||||| |||||||||||| |||| Sbjct: 272 tccgcggctaccgcgtgaggggaacagccagggatcc------ccgcaagaacgcccacc 325 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 326 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 385 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 | |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 386 tctccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 445 Query: 450 tctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagag 509 | ||||| ||||| | || ||||||||||| | ||||| || ||||||||||| | | Sbjct: 446 tgtccaaggaccctaatctggtgccggtcgcgattgaggggacgaggaacgtgatgaagg 505 Query: 510 cggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 506 cggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcgtacgg 554
>ref|XM_468346.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 212 bits (107), Expect = 9e-52 Identities = 292/354 (82%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 205 ggagctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagct 264 |||| |||| ||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 78 ggaggtggtgtgcgtgacgggagcgggaggcttcatcggatcatgggtggtgaaggagca 137 Query: 265 cctcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgc 324 ||||||||| |||||||||||||| ||||| ||| | |||||| | ||||||||| Sbjct: 138 cctcctccgtggctaccgcgtcaggggaacagccagggatcccac------caagaacgc 191 Query: 325 gcacctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcct 384 |||||||| || || || || || | ||||||||||| ||||||||||||||||||| Sbjct: 192 ccacctgctcgcgctcgacggagccggcgagaggctcaccctgtgccgcgccgacgtcct 251 Query: 385 cgactacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctc 444 |||| ||| |||| ||||||| ||| ||| ||||| |||||||| ||||||||||| Sbjct: 252 ggactccgagagcctgcgcgccgcgttcgccggatgccatggcgtcttccacgtcgcctc 311 Query: 445 gccggtctccaacgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtgat 504 ||||| ||||| ||||| | || |||||| |||| || ||||| || ||||||||| | Sbjct: 312 cccggtgtccaatgaccctaatctggtgccgatcgcggtggaggggacgaggaacgtggt 371 Query: 505 cagagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 | ||||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 372 gaacgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcgtacgg 425
>ref|XM_468350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1020 Score = 176 bits (89), Expect = 5e-41 Identities = 289/355 (81%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 ||||||| |||||||| || || || ||||||||||| || ||||||||| |||||||| Sbjct: 56 agctggtgtgcgtgaccggagcaggtggcttcatcgggtcatgggtggtgcgggagctcc 115 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 ||||||| |||||||||||||| | |||| | | || ||||| |||||||||||||| | Sbjct: 116 tcctccgtggctaccgcgtcagggccaccgtcagggaccccgcggaccgcaagaacgccc 175 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| || |||||||| || | ||||||||| | || |||||||||| ||||||| Sbjct: 176 acctgctcgcgctggagggagcccacgagaggctctccctgcgccgcgccgatgtcctcg 235 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgc 446 ||| || |||||| |||||| ||| ||| ||||| |||||||| |||||||||| | Sbjct: 236 acttcgccggcctcctcgccgcgttcgccgggtgccatggcgtcttccacgtcgcctgcc 295 Query: 447 cggtctccaa---cgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtga 503 || | ||||| ||| || || || || ||||||| || || || || |||||||||| Sbjct: 296 cgctgtccaaccgcgatccagagctgatggcggtcgcggtggatgggacgaggaacgtga 355 Query: 504 tcagagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 | | ||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 356 tgaacgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcctacgg 410
>dbj|AK107665.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-H02, full insert sequence Length = 1128 Score = 176 bits (89), Expect = 5e-41 Identities = 289/355 (81%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 ||||||| |||||||| || || || ||||||||||| || ||||||||| |||||||| Sbjct: 138 agctggtgtgcgtgaccggagcaggtggcttcatcgggtcatgggtggtgcgggagctcc 197 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 ||||||| |||||||||||||| | |||| | | || ||||| |||||||||||||| | Sbjct: 198 tcctccgtggctaccgcgtcagggccaccgtcagggaccccgcggaccgcaagaacgccc 257 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| || |||||||| || | ||||||||| | || |||||||||| ||||||| Sbjct: 258 acctgctcgcgctggagggagcccacgagaggctctccctgcgccgcgccgatgtcctcg 317 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgc 446 ||| || |||||| |||||| ||| ||| ||||| |||||||| |||||||||| | Sbjct: 318 acttcgccggcctcctcgccgcgttcgccgggtgccatggcgtcttccacgtcgcctgcc 377 Query: 447 cggtctccaa---cgaccccgacctcgtgccggtcgccgtcgagggaaccaggaacgtga 503 || | ||||| ||| || || || || ||||||| || || || || |||||||||| Sbjct: 378 cgctgtccaaccgcgatccagagctgatggcggtcgcggtggatgggacgaggaacgtga 437 Query: 504 tcagagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 | | ||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 438 tgaacgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcctacgg 492
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 170 bits (86), Expect = 3e-39 Identities = 211/253 (83%), Gaps = 6/253 (2%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 34783052 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 34783111 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | ||||| |||||||||||| |||| Sbjct: 34783112 tccgcggctaccgcgtgaggggaacagccagggatcc------ccgcaagaacgcccacc 34783165 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 34783166 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 34783225 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 || |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 34783226 tcgccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 34783285 Query: 450 tctccaacgaccc 462 | ||||| ||||| Sbjct: 34783286 tgtccaaggaccc 34783298 Score = 165 bits (83), Expect = 2e-37 Identities = 214/258 (82%), Gaps = 6/258 (2%) Strand = Plus / Plus Query: 205 ggagctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagct 264 |||| |||| ||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 34776228 ggaggtggtgtgcgtgacgggagcgggaggcttcatcggatcatgggtggtgaaggagca 34776287 Query: 265 cctcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgc 324 ||||||||| |||||||||||||| ||||| ||| | |||||| | ||||||||| Sbjct: 34776288 cctcctccgtggctaccgcgtcaggggaacagccagggatcccac------caagaacgc 34776341 Query: 325 gcacctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcct 384 |||||||| || || || || || | ||||||||||| ||||||||||||||||||| Sbjct: 34776342 ccacctgctcgcgctcgacggagccggcgagaggctcaccctgtgccgcgccgacgtcct 34776401 Query: 385 cgactacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctc 444 |||| ||| |||| ||||||| ||| ||| ||||| |||||||| ||||||||||| Sbjct: 34776402 ggactccgagagcctgcgcgccgcgttcgccggatgccatggcgtcttccacgtcgcctc 34776461 Query: 445 gccggtctccaacgaccc 462 ||||| ||||| ||||| Sbjct: 34776462 cccggtgtccaatgaccc 34776479 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 ||||||| |||||||| || || || ||||||||||| || ||||||||| |||||||| Sbjct: 34788274 agctggtgtgcgtgaccggagcaggtggcttcatcgggtcatgggtggtgcgggagctcc 34788333 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 ||||||| |||||||||||||| | |||| | | || ||||| |||||||||||||| | Sbjct: 34788334 tcctccgtggctaccgcgtcagggccaccgtcagggaccccgcggaccgcaagaacgccc 34788393 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| || |||||||| || | ||||||||| | || |||||||||| ||||||| Sbjct: 34788394 acctgctcgcgctggagggagcccacgagaggctctccctgcgccgcgccgatgtcctcg 34788453 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcct 443 ||| || |||||| |||||| ||| ||| ||||| |||||||| |||||||||| Sbjct: 34788454 acttcgccggcctcctcgccgcgttcgccgggtgccatggcgtcttccacgtcgcct 34788510 Score = 93.7 bits (47), Expect = 6e-16 Identities = 128/155 (82%) Strand = Plus / Minus Query: 308 gctgaccgcaagaacgcgcacctgctggccctggagggggcggaggagaggctcacaatg 367 |||||| ||||||| || |||||||| | |||||||| || || ||||||||| | | Sbjct: 34584251 gctgacagcaagaatgctcacctgcttgagctggagggagccgacgagaggctctccctc 34584192 Query: 368 tgccgcgccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggc 427 ||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 34584191 tgccgcgccgacgtcctcgacgccgccagcctccgcgccgccttcagcgggtgccacggc 34584132 Query: 428 gtctttcacgtcgcctcgccggtctccaacgaccc 462 ||||| || |||||||| ||||| || |||||||| Sbjct: 34584131 gtcttccatgtcgcctccccggtgtctaacgaccc 34584097 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 34761097 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 34761156 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcc 306 || |||| ||||||| |||||| ||||| ||| ||||||| Sbjct: 34761157 tcatccgtggctaccacgtcaggggaacagccagagatcc 34761196 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 464 gacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgcc 523 ||||| || ||||| || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 34761541 gacctggttccggttgcagtggaggggacgaggaacgtgatcaacgcggcggcggacatg 34761600 Query: 524 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||||||||||||||| Sbjct: 34761601 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 34761635 Score = 85.7 bits (43), Expect = 1e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 308 gctgaccgcaagaacgcgcacctgctggccctggagggggcggaggagaggctcacaatg 367 |||||| ||||||| || |||||||| | |||||||| || || |||||||| | | Sbjct: 34761292 gctgacagcaagaatgctcacctgcttgagctggagggagccgaccagaggctctccctc 34761351 Query: 368 tgccgcgccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggc 427 ||||| ||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 34761352 tgccgtgccgacgtcctcgacgccgccagcctccgcgccgccttcagcgggtgccacggc 34761411 Query: 428 gtctttcacgtcgcctcgccggtctccaacgaccc 462 ||||| || |||||||| ||||| ||||||||||| Sbjct: 34761412 gtcttccatgtcgcctccccggtgtccaacgaccc 34761446 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 34584447 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 34584388 Query: 267 tcctccgcggctaccgcgtcagaggaac 294 || |||| ||||||| |||||| ||||| Sbjct: 34584387 tcatccgtggctaccacgtcaggggaac 34584360 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||||| | ||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 34788763 aggaacgtgatgaacgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcc 34788822 Query: 554 tacgg 558 ||||| Sbjct: 34788823 tacgg 34788827 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 470 gtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgccggcgtg 529 ||||||||||| | ||||| || ||||||||||| | ||||| |||||| |||||| Sbjct: 34783393 gtgccggtcgcgattgaggggacgaggaacgtgatgaaggcggcggcggacatgggcgtg 34783452 Query: 530 cggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||| ||||| Sbjct: 34783453 cggcgcgtggtgttcacgtcgtcgtacgg 34783481 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 470 gtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgccggcgtg 529 |||||| |||| || ||||| || ||||||||| | | ||||| |||||| |||||| Sbjct: 34776584 gtgccgatcgcggtggaggggacgaggaacgtggtgaacgcggcggcggacatgggcgtg 34776643 Query: 530 cggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||| ||||| Sbjct: 34776644 cggcgcgtggtgttcacgtcgtcgtacgg 34776672 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 464 gacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgcc 523 ||||| || ||||| || || ||||| || ||||||||||||| || || |||||| Sbjct: 34584002 gaccttgttccggttgcagtggaggggacgaggaacgtgatcaacgcagcggcggacatg 34583943 Query: 524 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||||||| |||||||||||||||||||| ||||| Sbjct: 34583942 ggcgtgcgccgcgtggtgttcacgtcgtcgtacgg 34583908 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 396 gcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccg 448 ||||| ||||||||||| |||||||||||||||| | ||| |||||||||| Sbjct: 4497502 gcctccgcgccgccttcgccggctgccacggcgtcatccacaccgcctcgccg 4497554 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 8999030 ggtgcaggagctcctcctccgcgg 8999053 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gacgccggcgtgcggcgcgtggtg 541 ||||||||||||||||| |||||| Sbjct: 4497694 gacgccggcgtgcggcgggtggtg 4497717
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 170 bits (86), Expect = 3e-39 Identities = 211/253 (83%), Gaps = 6/253 (2%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 100900 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 100959 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | ||||| |||||||||||| |||| Sbjct: 100960 tccgcggctaccgcgtgaggggaacagccagggatcc------ccgcaagaacgcccacc 101013 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 101014 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 101073 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 || |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 101074 tcgccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 101133 Query: 450 tctccaacgaccc 462 | ||||| ||||| Sbjct: 101134 tgtccaaggaccc 101146 Score = 165 bits (83), Expect = 2e-37 Identities = 214/258 (82%), Gaps = 6/258 (2%) Strand = Plus / Plus Query: 205 ggagctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagct 264 |||| |||| ||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 94076 ggaggtggtgtgcgtgacgggagcgggaggcttcatcggatcatgggtggtgaaggagca 94135 Query: 265 cctcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgc 324 ||||||||| |||||||||||||| ||||| ||| | |||||| | ||||||||| Sbjct: 94136 cctcctccgtggctaccgcgtcaggggaacagccagggatcccac------caagaacgc 94189 Query: 325 gcacctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcct 384 |||||||| || || || || || | ||||||||||| ||||||||||||||||||| Sbjct: 94190 ccacctgctcgcgctcgacggagccggcgagaggctcaccctgtgccgcgccgacgtcct 94249 Query: 385 cgactacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctc 444 |||| ||| |||| ||||||| ||| ||| ||||| |||||||| ||||||||||| Sbjct: 94250 ggactccgagagcctgcgcgccgcgttcgccggatgccatggcgtcttccacgtcgcctc 94309 Query: 445 gccggtctccaacgaccc 462 ||||| ||||| ||||| Sbjct: 94310 cccggtgtccaatgaccc 94327 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 ||||||| |||||||| || || || ||||||||||| || ||||||||| |||||||| Sbjct: 106122 agctggtgtgcgtgaccggagcaggtggcttcatcgggtcatgggtggtgcgggagctcc 106181 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 ||||||| |||||||||||||| | |||| | | || ||||| |||||||||||||| | Sbjct: 106182 tcctccgtggctaccgcgtcagggccaccgtcagggaccccgcggaccgcaagaacgccc 106241 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| || |||||||| || | ||||||||| | || |||||||||| ||||||| Sbjct: 106242 acctgctcgcgctggagggagcccacgagaggctctccctgcgccgcgccgatgtcctcg 106301 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcct 443 ||| || |||||| |||||| ||| ||| ||||| |||||||| |||||||||| Sbjct: 106302 acttcgccggcctcctcgccgcgttcgccgggtgccatggcgtcttccacgtcgcct 106358 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 78945 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 79004 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcc 306 || |||| ||||||| |||||| ||||| ||| ||||||| Sbjct: 79005 tcatccgtggctaccacgtcaggggaacagccagagatcc 79044 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 464 gacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgcc 523 ||||| || ||||| || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 79389 gacctggttccggttgcagtggaggggacgaggaacgtgatcaacgcggcggcggacatg 79448 Query: 524 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||||||||||||||| Sbjct: 79449 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 79483 Score = 85.7 bits (43), Expect = 1e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 308 gctgaccgcaagaacgcgcacctgctggccctggagggggcggaggagaggctcacaatg 367 |||||| ||||||| || |||||||| | |||||||| || || |||||||| | | Sbjct: 79140 gctgacagcaagaatgctcacctgcttgagctggagggagccgaccagaggctctccctc 79199 Query: 368 tgccgcgccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggc 427 ||||| ||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 79200 tgccgtgccgacgtcctcgacgccgccagcctccgcgccgccttcagcgggtgccacggc 79259 Query: 428 gtctttcacgtcgcctcgccggtctccaacgaccc 462 ||||| || |||||||| ||||| ||||||||||| Sbjct: 79260 gtcttccatgtcgcctccccggtgtccaacgaccc 79294 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||||| | ||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 106611 aggaacgtgatgaacgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcc 106670 Query: 554 tacgg 558 ||||| Sbjct: 106671 tacgg 106675 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 470 gtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgccggcgtg 529 ||||||||||| | ||||| || ||||||||||| | ||||| |||||| |||||| Sbjct: 101241 gtgccggtcgcgattgaggggacgaggaacgtgatgaaggcggcggcggacatgggcgtg 101300 Query: 530 cggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||| ||||| Sbjct: 101301 cggcgcgtggtgttcacgtcgtcgtacgg 101329 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 470 gtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgccggcgtg 529 |||||| |||| || ||||| || ||||||||| | | ||||| |||||| |||||| Sbjct: 94432 gtgccgatcgcggtggaggggacgaggaacgtggtgaacgcggcggcggacatgggcgtg 94491 Query: 530 cggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||| ||||| Sbjct: 94492 cggcgcgtggtgttcacgtcgtcgtacgg 94520
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 170 bits (86), Expect = 3e-39 Identities = 211/253 (83%), Gaps = 6/253 (2%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 4647 tggtgtgcgtgacgggagcgggaggcttcatcgggtcgtgggtggtgaaggagctcctcc 4706 Query: 270 tccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgcacc 329 |||||||||||||||| || ||||| ||| | ||||| |||||||||||| |||| Sbjct: 4707 tccgcggctaccgcgtgaggggaacagccagggatcc------ccgcaagaacgcccacc 4760 Query: 330 tgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcgact 389 |||| | || ||||| || |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 4761 tgcttgatcttgagggagccaaggagaggctgacactgtgccgcgccgacgtcctggact 4820 Query: 390 acgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccgg 449 || |||| ||||||| ||| ||| ||||| |||||||| ||| ||||||| |||| Sbjct: 4821 tcgccagcctacgcgccgcgttcgccgggtgccatggcgtcttccacatcgcctccccgg 4880 Query: 450 tctccaacgaccc 462 | ||||| ||||| Sbjct: 4881 tgtccaaggaccc 4893 Score = 145 bits (73), Expect = 2e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 ||||||| |||||||| || || || ||||||||||| || ||||||||| |||||||| Sbjct: 9869 agctggtgtgcgtgaccggagcaggtggcttcatcgggtcatgggtggtgcgggagctcc 9928 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcccgctgaccgcaagaacgcgc 326 ||||||| |||||||||||||| | |||| | | || ||||| |||||||||||||| | Sbjct: 9929 tcctccgtggctaccgcgtcagggccaccgtcagggaccccgcggaccgcaagaacgccc 9988 Query: 327 acctgctggccctggagggggcggaggagaggctcacaatgtgccgcgccgacgtcctcg 386 ||||||| || |||||||| || | ||||||||| | || |||||||||| ||||||| Sbjct: 9989 acctgctcgcgctggagggagcccacgagaggctctccctgcgccgcgccgatgtcctcg 10048 Query: 387 actacgatggcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcct 443 ||| || |||||| |||||| ||| ||| ||||| |||||||| |||||||||| Sbjct: 10049 acttcgccggcctcctcgccgcgttcgccgggtgccatggcgtcttccacgtcgcct 10105 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgccggcgtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||||| | ||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10358 aggaacgtgatgaacgcggcggcggacatgggcgtgcggcgcgtggtgttcacgtcgtcc 10417 Query: 554 tacgg 558 ||||| Sbjct: 10418 tacgg 10422 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 470 gtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgccggcgtg 529 ||||||||||| | ||||| || ||||||||||| | ||||| |||||| |||||| Sbjct: 4988 gtgccggtcgcgattgaggggacgaggaacgtgatgaaggcggcggcggacatgggcgtg 5047 Query: 530 cggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||| ||||| Sbjct: 5048 cggcgcgtggtgttcacgtcgtcgtacgg 5076
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 93.7 bits (47), Expect = 6e-16 Identities = 128/155 (82%) Strand = Plus / Minus Query: 308 gctgaccgcaagaacgcgcacctgctggccctggagggggcggaggagaggctcacaatg 367 |||||| ||||||| || |||||||| | |||||||| || || ||||||||| | | Sbjct: 95191 gctgacagcaagaatgctcacctgcttgagctggagggagccgacgagaggctctccctc 95132 Query: 368 tgccgcgccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggc 427 ||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 95131 tgccgcgccgacgtcctcgacgccgccagcctccgcgccgccttcagcgggtgccacggc 95072 Query: 428 gtctttcacgtcgcctcgccggtctccaacgaccc 462 ||||| || |||||||| ||||| || |||||||| Sbjct: 95071 gtcttccatgtcgcctccccggtgtctaacgaccc 95037 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 95387 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 95328 Query: 267 tcctccgcggctaccgcgtcagaggaac 294 || |||| ||||||| |||||| ||||| Sbjct: 95327 tcatccgtggctaccacgtcaggggaac 95300 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 464 gacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgcc 523 ||||| || ||||| || || ||||| || ||||||||||||| || || |||||| Sbjct: 94942 gaccttgttccggttgcagtggaggggacgaggaacgtgatcaacgcagcggcggacatg 94883 Query: 524 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||||||| |||||||||||||||||||| ||||| Sbjct: 94882 ggcgtgcgccgcgtggtgttcacgtcgtcgtacgg 94848
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 93.7 bits (47), Expect = 6e-16 Identities = 128/155 (82%) Strand = Plus / Minus Query: 308 gctgaccgcaagaacgcgcacctgctggccctggagggggcggaggagaggctcacaatg 367 |||||| ||||||| || |||||||| | |||||||| || || ||||||||| | | Sbjct: 50866 gctgacagcaagaatgctcacctgcttgagctggagggagccgacgagaggctctccctc 50807 Query: 368 tgccgcgccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggc 427 ||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 50806 tgccgcgccgacgtcctcgacgccgccagcctccgcgccgccttcagcgggtgccacggc 50747 Query: 428 gtctttcacgtcgcctcgccggtctccaacgaccc 462 ||||| || |||||||| ||||| || |||||||| Sbjct: 50746 gtcttccatgtcgcctccccggtgtctaacgaccc 50712 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 51062 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 51003 Query: 267 tcctccgcggctaccgcgtcagaggaac 294 || |||| ||||||| |||||| ||||| Sbjct: 51002 tcatccgtggctaccacgtcaggggaac 50975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 464 gacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgcc 523 ||||| || ||||| || || ||||| || ||||||||||||| || || |||||| Sbjct: 50617 gaccttgttccggttgcagtggaggggacgaggaacgtgatcaacgcagcggcggacatg 50558 Query: 524 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 |||||||| |||||||||||||||||||| ||||| Sbjct: 50557 ggcgtgcgccgcgtggtgttcacgtcgtcgtacgg 50523
>emb|AJ428493.1|OSA428493 Oryza sativa ccr gene for cinnamoyl CoA reductase, exons 1-5 Length = 3045 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 207 agctggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcc 266 |||||||||| ||||| || || || |||||||| || || ||||||||||||||||||| Sbjct: 1122 agctggtctgtgtgaccggagcaggtggcttcattgggtcgtgggtggtgaaggagctcc 1181 Query: 267 tcctccgcggctaccgcgtcagaggaaccgcccgagatcc 306 || |||| ||||||| |||||| ||||| ||| ||||||| Sbjct: 1182 tcatccgtggctaccacgtcaggggaacagccagagatcc 1221 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 464 gacctcgtgccggtcgccgtcgagggaaccaggaacgtgatcagagcggcagcggacgcc 523 ||||| || ||||| || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 1566 gacctggttccggttgcagtggaggggacgaggaacgtgatcaacgcggcggcggacatg 1625 Query: 524 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 558 ||||||||||||||||||||||||||||||||||| Sbjct: 1626 ggcgtgcggcgcgtggtgttcacgtcgtcctacgg 1660 Score = 85.7 bits (43), Expect = 1e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 308 gctgaccgcaagaacgcgcacctgctggccctggagggggcggaggagaggctcacaatg 367 |||||| ||||||| || |||||||| | |||||||| || || |||||||| | | Sbjct: 1317 gctgacagcaagaatgctcacctgcttgagctggagggagccgaccagaggctctccctc 1376 Query: 368 tgccgcgccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggc 427 ||||| ||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 1377 tgccgtgccgacgtcctcgacgccgccagcctccgcgccgccttcagcgggtgccacggc 1436 Query: 428 gtctttcacgtcgcctcgccggtctccaacgaccc 462 ||||| || |||||||| ||||| ||||||||||| Sbjct: 1437 gtcttccatgtcgcctccccggtgtccaacgaccc 1471
>ref|NM_187716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 981 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 23 tggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctcc 82 Query: 270 tccgcgg 276 |||||| Sbjct: 83 accgcgg 89
>ref|NM_187717.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 26 tggtgtgcgtgaccggcgccggtggcttcatcgggtcgtggctggtgaaggagctcctcc 85 Query: 270 tccgcgg 276 |||||| Sbjct: 86 accgcgg 92
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 10146969 tggtgtgcgtgaccggcgccggtggcttcatcgggtcgtggctggtgaaggagctcctcc 10147028 Query: 270 tccgcgg 276 |||||| Sbjct: 10147029 accgcgg 10147035 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 10142472 tggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctcc 10142531 Query: 270 tccgcgg 276 |||||| Sbjct: 10142532 accgcgg 10142538 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tgaaggagctcctcctccgc 274 |||||||||||||||||||| Sbjct: 39930996 tgaaggagctcctcctccgc 39930977 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 28411591 ggcggagcgggagcgggagc 28411610 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 14467323 ggagcgggagcgggagctgg 14467304
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 94438 tggtgtgcgtgaccggcgccggtggcttcatcgggtcgtggctggtgaaggagctcctcc 94497 Query: 270 tccgcgg 276 |||||| Sbjct: 94498 accgcgg 94504 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 89941 tggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctcc 90000 Query: 270 tccgcgg 276 |||||| Sbjct: 90001 accgcgg 90007
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 12283 tggtgtgcgtgaccggcgccggtggcttcatcgggtcgtggctggtgaaggagctcctcc 12342 Query: 270 tccgcgg 276 |||||| Sbjct: 12343 accgcgg 12349 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 7786 tggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctcc 7845 Query: 270 tccgcgg 276 |||||| Sbjct: 7846 accgcgg 7852
>dbj|AK107149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-D12, full insert sequence Length = 1227 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 117 tggtgtgcgtgaccggcgccggtggcttcatcgggtcgtggctggtgaaggagctcctcc 176 Query: 270 tccgcgg 276 |||||| Sbjct: 177 accgcgg 183
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 71568 tggtgtgcgtgaccggcgccggtggcttcatcgggtcgtggctggtgaaggagctcctcc 71627 Query: 270 tccgcgg 276 |||||| Sbjct: 71628 accgcgg 71634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 210 tggtctgcgtgacgggtgcgggaggcttcatcggctcctgggtggtgaaggagctcctcc 269 |||| |||||||| || || || ||||||||||| || ||| |||||||||||||||||| Sbjct: 67071 tggtgtgcgtgaccggcgccggtggcttcatcgggtcatggctggtgaaggagctcctcc 67130 Query: 270 tccgcgg 276 |||||| Sbjct: 67131 accgcgg 67137
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 230 ggaggcttcatcggctcctgggtggtgaaggagctcctcctccgcggcta 279 ||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 4538093 ggaggcttcattgggtcgtgggtggtgaaggagctcctgctccgtggcta 4538142 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 15024260 gccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgt 15024205
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 230 ggaggcttcatcggctcctgggtggtgaaggagctcctcctccgcggcta 279 ||||||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 81467 ggaggcttcattgggtcgtgggtggtgaaggagctcctgctccgtggcta 81516
>gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA reductase I mRNA, partial cds Length = 696 Score = 58.0 bits (29), Expect = 3e-05 Identities = 52/59 (88%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 498 acgtgatcagagcggcagcggacgccggc---gtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||||| Sbjct: 53 acgtgatcaacgcggcggcggacgccggcaccgtgcgccgcgtggtgttcacgtcgtcc 111
>ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 396 gcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccg 448 ||||| ||||||||||| |||||||||||||||| | ||| |||||||||| Sbjct: 299 gcctccgcgccgccttcgccggctgccacggcgtcatccacaccgcctcgccg 351 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gacgccggcgtgcggcgcgtggtg 541 ||||||||||||||||| |||||| Sbjct: 424 gacgccggcgtgcggcgggtggtg 447
>gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA reductase mRNA, complete cds Length = 1279 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || |||||||| || | |||||||||||||| || Sbjct: 311 gccgacctcctcgactacgacgccatctgcgccgccgtcgagggctgccacggcgtgttc 370 Query: 434 cacgtcgcctcgccggtctccaacgaccc 462 ||| |||||| || ||| || ||||||| Sbjct: 371 cacaccgcctcccccgtcaccgacgaccc 399
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 396 gcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccg 448 ||||| ||||||||||| |||||||||||||||| | ||| |||||||||| Sbjct: 32881 gcctccgcgccgccttcgccggctgccacggcgtcatccacaccgcctcgccg 32933 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gacgccggcgtgcggcgcgtggtg 541 ||||||||||||||||| |||||| Sbjct: 33073 gacgccggcgtgcggcgggtggtg 33096
>emb|X98083.1|ZMCINNRED Z.mays mRNA for cinnamoyl-CoA reductase Length = 1398 Score = 50.1 bits (25), Expect = 0.008 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 498 acgtgatcagagcggcagcggacgccggc---gtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||| Sbjct: 458 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcc 516
>emb|Y13734.1|ZMCCRGENE Zea mays mRNA for cinnamoyl CoA reductase Length = 1481 Score = 50.1 bits (25), Expect = 0.008 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 498 acgtgatcagagcggcagcggacgccggc---gtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||| Sbjct: 560 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcc 618
>dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M01, full insert sequence Length = 1335 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 396 gcctcggcgccgccttccacggctgccacggcgtctttcacgtcgcctcgccg 448 ||||| ||||||||||| |||||||||||||||| | ||| |||||||||| Sbjct: 299 gcctccgcgccgccttcgccggctgccacggcgtcatccacaccgcctcgccg 351 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gacgccggcgtgcggcgcgtggtg 541 ||||||||||||||||| |||||| Sbjct: 424 gacgccggcgtgcggcgggtggtg 447
>gb|AY103989.1| Zea mays PCO114642 mRNA sequence Length = 1521 Score = 50.1 bits (25), Expect = 0.008 Identities = 51/59 (86%), Gaps = 3/59 (5%) Strand = Plus / Plus Query: 498 acgtgatcagagcggcagcggacgccggc---gtgcggcgcgtggtgttcacgtcgtcc 553 ||||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||| Sbjct: 600 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcc 658
>ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1423 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 413 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 472 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| |||||| || ||| || |||||||||| Sbjct: 473 cacaccgcctcccccgtcaccgacgaccccga 504 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 572 gtgcggcgggtggtgttcacgtcgtc 597
>ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA Length = 1439 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 414 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 473 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| |||||| || ||| || |||||||||| Sbjct: 474 cacaccgcctcccccgtcaccgacgaccccga 505 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 573 gtgcggcgggtggtgttcacgtcgtc 598
>ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA Length = 1441 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 414 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 473 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| |||||| || ||| || |||||||||| Sbjct: 474 cacaccgcctcccccgtcaccgacgaccccga 505 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 573 gtgcggcgggtggtgttcacgtcgtc 598
>gb|AY061888.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) mRNA, complete cds Length = 1395 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || ||||||||||||||||||| Sbjct: 387 gccgacctcctcgactacgacgccatccgccgcgccatcgacggctgccacggcgtcttc 446 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| ||| || || ||| || |||||||||| Sbjct: 447 cacaccgcgtcccccgtcaccgacgaccccga 478
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 15903 gccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgt 15848
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 93706 gccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgt 93651
>dbj|AB122055.1| Oryza sativa (japonica cultivar-group) CCR mRNA for cinnamoyl coenzyme A reductase, partial cds Length = 1111 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 139 gccgacctcctcgactacgactccatccgcgccgccctcgacggctgccacggcgt 194
>dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A12, full insert sequence Length = 1253 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 281 gccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgt 336
>dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A12, full insert sequence Length = 1439 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 414 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 473 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| |||||| || ||| || |||||||||| Sbjct: 474 cacaccgcctcccccgtcaccgacgaccccga 505 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 573 gtgcggcgggtggtgttcacgtcgtc 598
>dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A12, full insert sequence Length = 1423 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 413 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 472 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| |||||| || ||| || |||||||||| Sbjct: 473 cacaccgcctcccccgtcaccgacgaccccga 504 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 572 gtgcggcgggtggtgttcacgtcgtc 597
>dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D11, full insert sequence Length = 1245 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 286 gccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgt 341
>dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143B20, full insert sequence Length = 1441 Score = 48.1 bits (24), Expect = 0.031 Identities = 75/92 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 414 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 473 Query: 434 cacgtcgcctcgccggtctccaacgaccccga 465 ||| |||||| || ||| || |||||||||| Sbjct: 474 cacaccgcctcccccgtcaccgacgaccccga 505 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 573 gtgcggcgggtggtgttcacgtcgtc 598
>dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P15, full insert sequence Length = 1265 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgt 429 |||||| ||||||||||||| | || |||||||| || |||||||||||||||| Sbjct: 287 gccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgt 342
>gb|AY061889.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) gene, complete cds Length = 5799 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtctt 432 |||||| ||||||||||||| | | || || |||| || ||||||||||||||||||| Sbjct: 682 gccgacctcctcgactacgacgccatccgccgcgccatcgacggctgccacggcgtctt 740
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 74/91 (81%) Strand = Plus / Minus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 21505908 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 21505849 Query: 434 cacgtcgcctcgccggtctccaacgaccccg 464 ||| |||||| || ||| || ||||||||| Sbjct: 21505848 cacaccgcctcccccgtcaccgacgaccccg 21505818 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 21505580 gtgcggcgggtggtgttcacgtcgtc 21505555 Score = 40.1 bits (20), Expect = 7.6 Identities = 52/62 (83%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgc---cggcgtgcggcgcgtggtgttcacgtcg 550 ||||||||||||| ||||| |||||||| |||||| || ||||||||| | |||||| Sbjct: 10713528 aggaacgtgatcaccgcggcggcggacgcgggcggcgtccgccgcgtggtgatgacgtcg 10713587 Query: 551 tc 552 || Sbjct: 10713588 tc 10713589 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 516486 ggtgcaggagctcctcctccgcgg 516509
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 46.1 bits (23), Expect = 0.12 Identities = 74/91 (81%) Strand = Plus / Minus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 109903 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 109844 Query: 434 cacgtcgcctcgccggtctccaacgaccccg 464 ||| |||||| || ||| || ||||||||| Sbjct: 109843 cacaccgcctcccccgtcaccgacgaccccg 109813 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 109575 gtgcggcgggtggtgttcacgtcgtc 109550
>dbj|AK102061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D10, full insert sequence Length = 1090 Score = 46.1 bits (23), Expect = 0.12 Identities = 74/91 (81%) Strand = Plus / Plus Query: 374 gccgacgtcctcgactacgatggcctcggcgccgccttccacggctgccacggcgtcttt 433 |||||| ||||||||||||| | | || || |||| || |||||||||||||||||| Sbjct: 508 gccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttc 567 Query: 434 cacgtcgcctcgccggtctccaacgaccccg 464 ||| |||||| || ||| || ||||||||| Sbjct: 568 cacaccgcctcccccgtcaccgacgaccccg 598 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 gtgcggcgcgtggtgttcacgtcgtc 552 |||||||| ||||||||||||||||| Sbjct: 836 gtgcggcgggtggtgttcacgtcgtc 861
>ref|NM_189847.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 233 aggcggagcgggagcgggagc 253
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 115330 aggcggagcgggagcgggagc 115310
>ref|XM_822439.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.3910) partial mRNA Length = 1146 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ttagccaactacacaagcaat 82 ||||||||||||||||||||| Sbjct: 662 ttagccaactacacaagcaat 682
>emb|AJ231134.1|SOF231134 Saccharum officinarum mRNA for cinnamoyl-CoA reductase Length = 1511 Score = 42.1 bits (21), Expect = 1.9 Identities = 47/55 (85%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 498 acgtgatcagagcggcagcggacgccggc---gtgcggcgcgtggtgttcacgtc 549 ||||||||| ||||| ||||| |||||| |||||||| |||||||||||||| Sbjct: 551 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtc 605
>gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, complete sequence Length = 207661 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ctgcgtgacgggtgcgggagg 234 ||||||||||||||||||||| Sbjct: 3404 ctgcgtgacgggtgcgggagg 3424
>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the 3' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa, a novel gene, the NKX6-2 gene for NK6 transcription factor related locus 2, a novel gene (DKFZp434A1721), the 3' end of a novel gene and ten CpG islands, complete sequence Length = 208064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gagcggcagcggacgccggcg 527 ||||||||||||||||||||| Sbjct: 109114 gagcggcagcggacgccggcg 109134
>ref|XM_783310.1| PREDICTED: Strongylocentrotus purpuratus similar to restin (LOC583402), partial mRNA Length = 1000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 agcgggagcgggagctggtct 215 ||||||||||||||||||||| Sbjct: 62 agcgggagcgggagctggtct 82
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctggagggggcggaggagagg 358 ||||||||||||||||||||| Sbjct: 42225 ctggagggggcggaggagagg 42245
>gb|AY851116.1| Aeromonas eucrenophila strain NCMB 74 RpoB (rpoB) gene, partial cds Length = 517 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 492 ccaggaacgtgatcagagcggcagc 516 ||||||||| ||||||||||||||| Sbjct: 491 ccaggaacgggatcagagcggcagc 467
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 2339331 aggcggagcgggagcgggagc 2339311
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 25562452 aggcggagcgggagcgggagc 25562432
>gb|AF184215.1|AF184215 Homo sapiens GTX (GTX) gene, complete cds; and inositol polyphosphate-5-phosphatase (INPP5A) gene, partial cds Length = 10462 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 gagcggcagcggacgccggcg 527 ||||||||||||||||||||| Sbjct: 5002 gagcggcagcggacgccggcg 4982
>gb|AC036164.14| Homo sapiens chromosome 17, clone RP11-356I18, complete sequence Length = 82171 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ctgcgtgacgggtgcgggagg 234 ||||||||||||||||||||| Sbjct: 6845 ctgcgtgacgggtgcgggagg 6825
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctggt 213 ||||||||||||||||||||| Sbjct: 5060131 ggagcgggagcgggagctggt 5060111 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gcaggcggagcgggagcggg 206 |||||||||||||||||||| Sbjct: 3072250 gcaggcggagcgggagcggg 3072231
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 16425 aggcggagcgggagcgggagc 16405
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 99722 aggcggagcgggagcgggagc 99702
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aggcggagcgggagcgggagc 209 ||||||||||||||||||||| Sbjct: 2347112 aggcggagcgggagcgggagc 2347092
>ref|NM_125235.2| Arabidopsis thaliana cinnamoyl-CoA reductase AT5G58490 mRNA, complete cds Length = 1164 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 120 agctcctcctccgcggctac 139
>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete sequence Length = 198672 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gaagcagaggcaggcggagc 197 |||||||||||||||||||| Sbjct: 160786 gaagcagaggcaggcggagc 160767
>ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 7.6 Identities = 52/62 (83%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgc---cggcgtgcggcgcgtggtgttcacgtcg 550 ||||||||||||| ||||| |||||||| |||||| || ||||||||| | |||||| Sbjct: 499 aggaacgtgatcaccgcggcggcggacgcgggcggcgtccgccgcgtggtgatgacgtcg 558 Query: 551 tc 552 || Sbjct: 559 tc 560
>ref|XM_479728.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 716 ggtgcaggagctcctcctccgcgg 693
>ref|XM_507092.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.23 mRNA Length = 2338 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 1046 ggtgcaggagctcctcctccgcgg 1023
>ref|XM_464884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 53 ggtgcaggagctcctcctccgcgg 76
>ref|NM_001003108.1| Canis familiaris G protein-coupled receptor 83 (GPR83), mRNA Length = 1808 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 59 ggcggagcgggagcgggagc 78
>ref|NM_193990.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 267 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 87 ggagcgggagcgggagctgg 106
>ref|NM_189940.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2853 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tgaaggagctcctcctccgc 274 |||||||||||||||||||| Sbjct: 197 tgaaggagctcctcctccgc 216
>ref|NM_192115.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 116 ggcggagcgggagcgggagc 97
>ref|XM_362319.1| Magnaporthe grisea 70-15 hypothetical protein (MG04764.4) partial cds Length = 1158 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 399 tcggcgccgccttccacggctgccacggcgtc 430 |||||| || || ||||||||||||||||||| Sbjct: 272 tcggcggcggctaccacggctgccacggcgtc 303
>ref|XM_880988.1| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2), transcript variant 5 (LOC509208), mRNA Length = 2187 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 1265 ggagcgggagcgggagctgg 1246
>ref|XM_880966.1| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2), transcript variant 4 (LOC509208), mRNA Length = 1991 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 1265 ggagcgggagcgggagctgg 1246
>ref|XM_867858.1| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2), transcript variant 2 (LOC509208), mRNA Length = 2476 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 1265 ggagcgggagcgggagctgg 1246
>gb|AC125265.8| Mus musculus chromosome 6, clone RP24-444K24, complete sequence Length = 156056 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gagatgaagcagaggcaggc 192 |||||||||||||||||||| Sbjct: 104798 gagatgaagcagaggcaggc 104817
>gb|AC131185.4| Mus musculus BAC clone RP23-402H1 from chromosome 19, complete sequence Length = 208584 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ggagggggcggaggagaggc 359 |||||||||||||||||||| Sbjct: 103540 ggagggggcggaggagaggc 103521
>ref|XM_754327.1| Ustilago maydis 521 hypothetical protein (UM03273.1) partial mRNA Length = 2304 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 gcggagcgggagcgggagctggtc 214 |||||||||||||||||| ||||| Sbjct: 779 gcggagcgggagcgggaggtggtc 756
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gtggccaccgacaacggcga 174 |||||||||||||||||||| Sbjct: 5008293 gtggccaccgacaacggcga 5008274
>ref|XM_380904.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00728.1) partial mRNA Length = 2628 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cttccacggctgccacggcg 428 |||||||||||||||||||| Sbjct: 2582 cttccacggctgccacggcg 2563
>gb|AC122258.4| Mus musculus BAC clone RP23-182F18 from 7, complete sequence Length = 186441 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gaagcagaggcaggcggagc 197 |||||||||||||||||||| Sbjct: 64635 gaagcagaggcaggcggagc 64616
>emb|AL355312.24| Human DNA sequence from clone RP11-350J20 on chromosome 6 Contains gene FLJ13287, the PCMT1 gene for protein-L-isoaspartate (D-aspartate) O-methyltransferase,gene FLJ14735, a novel pseudogene, a novel gene, t-complex 1 (TCP1) pseudogene, the gene for lymphocyte effector toxicity activation ligand (LETAL), the 5' end of a novel gene, a novel pseudogene similar to FLJ13465 and four CpG islands, complete sequence Length = 188684 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 68862 ggagcgggagcgggagctgg 68881
>emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chromosome 13 Contains a Eukaryotic initiation factor 4A (eIF4a) pseudogene, complete sequence Length = 126502 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 32509 ggcggagcgggagcgggagc 32528
>gb|AY070387.1| Arabidopsis thaliana At5g58490 mRNA sequence Length = 1176 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 115 agctcctcctccgcggctac 134
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 atgaagcagaggcaggcgga 195 |||||||||||||||||||| Sbjct: 255296 atgaagcagaggcaggcgga 255315
>gb|AC159505.7| Mus musculus 6 BAC RP23-81D20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 254457 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gagatgaagcagaggcaggc 192 |||||||||||||||||||| Sbjct: 62513 gagatgaagcagaggcaggc 62494
>gb|AE012077.1| Xanthomonas axonopodis pv. citri str. 306, section 455 of 469 of the complete genome Length = 9754 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gtggccaccgacaacggcga 174 |||||||||||||||||||| Sbjct: 7198 gtggccaccgacaacggcga 7179
>gb|DQ380639.1| Environmental sequence clone VD-7 arsenite oxidase Mo-pterin subunit (aoxB) gene, partial cds Length = 625 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gcggcagcggacgccggcgt 528 |||||||||||||||||||| Sbjct: 517 gcggcagcggacgccggcgt 536
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 1968755 ggagcgggagcgggagctgg 1968736
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 120733 ggagcgggagcgggagctgg 120752
>gb|AC091045.3| Homo sapiens chromosome 15 clone RP11-111A22 map 15q14, complete sequence Length = 171947 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 15435 ggagcgggagcgggagctgg 15416
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 caacgaccccgacctcgtgc 473 |||||||||||||||||||| Sbjct: 845988 caacgaccccgacctcgtgc 846007
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tcatcggctcctgggtggtgaagg 260 |||||| ||||||||||||||||| Sbjct: 2155355 tcatcgtctcctgggtggtgaagg 2155378
>gb|AC013356.8|AC013356 Homo sapiens chromosome 15 clone RP11-64K12 map 15q14, complete sequence Length = 176910 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 121952 ggagcgggagcgggagctgg 121933
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 7541042 ggtgcaggagctcctcctccgcgg 7541019
>emb|BX829945.1|CNS0A05K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB48ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1291 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 87 agctcctcctccgcggctac 106
>emb|BX832502.1|CNS09ZKK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1082 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 91 agctcctcctccgcggctac 110
>emb|BX833752.1|CNS09Z4X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1042 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 66 agctcctcctccgcggctac 85
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tgaaggagctcctcctccgc 274 |||||||||||||||||||| Sbjct: 22447 tgaaggagctcctcctccgc 22428
>gb|AY086975.1| Arabidopsis thaliana clone 30064 mRNA, complete sequence Length = 1150 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 120 agctcctcctccgcggctac 139
>gb|BT002742.1| Arabidopsis thaliana clone C105311 putative cinnamoyl-CoA reductase (At5g58490) mRNA, complete cds Length = 1006 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 74 agctcctcctccgcggctac 93
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tgaaggagctcctcctccgc 274 |||||||||||||||||||| Sbjct: 111704 tgaaggagctcctcctccgc 111685
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 126691 ggcggagcgggagcgggagc 126710
>gb|AC104770.10| Homo sapiens chromosome 17, clone RP11-960B9, complete sequence Length = 188574 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 159850 ggagcgggagcgggagctgg 159831
>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence Length = 208487 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaagcagaggcaggcggagc 197 |||||||||||||||||||| Sbjct: 185261 gaagcagaggcaggcggagc 185280
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ggccctggagggggcggagg 353 |||||||||||||||||||| Sbjct: 83998 ggccctggagggggcggagg 84017
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 128720 ggagcgggagcgggagctgg 128701
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 26636 ggagcgggagcgggagctgg 26617
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 100973 ggtgcaggagctcctcctccgcgg 100950
>emb|AJ605768.1| Festuca arundinacea partial mRNA for putative cinnamoyl coA reductase (ccr gene) Length = 311 Score = 40.1 bits (20), Expect = 7.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 414 acggctgccacggcgtctttcacgtcgcctcgccggtctccaacgaccccga 465 ||||||||||||||||||| ||| ||| || || ||| || |||||||||| Sbjct: 44 acggctgccacggcgtcttccacaccgcatcccccgtcaccgacgaccccga 95
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 39476 ggtgcaggagctcctcctccgcgg 39499
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 71639 ggtgcaggagctcctcctccgcgg 71662
>gb|AY943953.1| Streptomyces sp. FQ1 plasmid pFP1, complete sequence Length = 39360 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 acgatggcctcggcgccgcc 409 |||||||||||||||||||| Sbjct: 5237 acgatggcctcggcgccgcc 5218
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2 Length = 51440 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctcctcctccgcggctac 280 |||||||||||||||||||| Sbjct: 29179 agctcctcctccgcggctac 29198
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 106446 ggtgcaggagctcctcctccgcgg 106469
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 40.1 bits (20), Expect = 7.6 Identities = 52/62 (83%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgc---cggcgtgcggcgcgtggtgttcacgtcg 550 ||||||||||||| ||||| |||||||| |||||| || ||||||||| | |||||| Sbjct: 10660 aggaacgtgatcaccgcggcggcggacgcgggcggcgtccgccgcgtggtgatgacgtcg 10719 Query: 551 tc 552 || Sbjct: 10720 tc 10721
>dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D08, full insert sequence Length = 1420 Score = 40.1 bits (20), Expect = 7.6 Identities = 52/62 (83%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 494 aggaacgtgatcagagcggcagcggacgc---cggcgtgcggcgcgtggtgttcacgtcg 550 ||||||||||||| ||||| |||||||| |||||| || ||||||||| | |||||| Sbjct: 499 aggaacgtgatcaccgcggcggcggacgcgggcggcgtccgccgcgtggtgatgacgtcg 558 Query: 551 tc 552 || Sbjct: 559 tc 560
>dbj|AK099957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125P17, full insert sequence Length = 1037 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 225 ggcggagcgggagcgggagc 206
>dbj|AK073904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072A21, full insert sequence Length = 2226 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tgaaggagctcctcctccgc 274 |||||||||||||||||||| Sbjct: 421 tgaaggagctcctcctccgc 440
>dbj|AK073832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067M21, full insert sequence Length = 3566 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tgaaggagctcctcctccgc 274 |||||||||||||||||||| Sbjct: 415 tgaaggagctcctcctccgc 434
>dbj|AK073752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G24, full insert sequence Length = 2337 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 1045 ggtgcaggagctcctcctccgcgg 1022
>dbj|AK072744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139D20, full insert sequence Length = 1087 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 269 ggcggagcgggagcgggagc 250
>dbj|AK071992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K21, full insert sequence Length = 2008 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 ggtgaaggagctcctcctccgcgg 276 |||| ||||||||||||||||||| Sbjct: 716 ggtgcaggagctcctcctccgcgg 693
>ref|NM_210324.1| Eremothecium gossypii AER110Wp (AER110W), mRNA Length = 3918 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 caacgaccccgacctcgtgc 473 |||||||||||||||||||| Sbjct: 3393 caacgaccccgacctcgtgc 3412
>gb|AY107063.1| Zea mays PCO100324 mRNA sequence Length = 999 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 215 tgcgtgacgggtgcgggaggcttcatcg 242 |||||||| || |||||||||||||||| Sbjct: 205 tgcgtgaccggcgcgggaggcttcatcg 232
>gb|AC153902.4| Mus musculus 6 BAC RP23-5K15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gagatgaagcagaggcaggc 192 |||||||||||||||||||| Sbjct: 21914 gagatgaagcagaggcaggc 21933
>gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.243_K_12, complete sequence Length = 152355 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 4310 ggagcgggagcgggagctgg 4291
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ggccctggagggggcggagg 353 |||||||||||||||||||| Sbjct: 44991 ggccctggagggggcggagg 45010
>gb|U59446.1|BNU59446 Brassica napus myrosinase-binding protein related protein mRNA, partial cds Length = 1923 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ggagcgggagcgggagctgg 212 |||||||||||||||||||| Sbjct: 1079 ggagcgggagcgggagctgg 1060
>gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complete sequence Length = 178176 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cacctgctggccctggaggg 345 |||||||||||||||||||| Sbjct: 106515 cacctgctggccctggaggg 106496
>emb|Y19224.1|CFY19224 Canis familiaris mRNA for glucocorticoid induced receptor (GIR gene) Length = 1808 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 59 ggcggagcgggagcgggagc 78
>gb|M12856.1|CHKUGU2 Chicken U2 small nuclear RNA gene Length = 840 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggagcgggagcgggagc 209 |||||||||||||||||||| Sbjct: 207 ggcggagcgggagcgggagc 226
>emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chromosome 2, complete sequence Length = 137773 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaagcagaggcaggcggagc 197 |||||||||||||||||||| Sbjct: 88916 gaagcagaggcaggcggagc 88935 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,593,772 Number of Sequences: 3902068 Number of extensions: 3593772 Number of successful extensions: 138200 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 136445 Number of HSP's gapped (non-prelim): 1723 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
