ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart26c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kin... 30 4.8
2YIP5_YEAST (P53108) Protein YIP5 (Ypt-interacting protein 5) 30 4.8
3C84A1_ARATH (Q42600) Cytochrome P450 84A1 (EC 1.14.-.-) (Ferulat... 30 4.8
4ASHH2_ARATH (Q2LAE1) Histone-lysine N-methyltransferase, H3 lysi... 29 8.1
5GUAA_BORPE (Q7VVM4) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 29 8.1
6GUAA_BORPA (Q7WAV6) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 29 8.1
7GUAA_BORBR (Q7WK13) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 29 8.1

>M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kinase 11 (EC|
           2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3
           domain-containing proline-rich kinase)
          Length = 847

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 192 LLGSVPAVAVTPEERKAGVPAEVGNATATSRLQQ 293
           L G+ P  ++ PEE K  VPAE G+++ T +L Q
Sbjct: 609 LNGNPPRPSLEPEEPKRPVPAERGSSSGTPKLIQ 642



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>YIP5_YEAST (P53108) Protein YIP5 (Ypt-interacting protein 5)|
          Length = 310

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 408 YAPYFNVDTDVVVDRLISSV-YPMDGFFRKIDVNPDMYGPLWITTTLIFM 554
           Y+ YF +D      RL + + +  D      + N D+YG +WIT T++ +
Sbjct: 97  YSKYFQIDLTQFKKRLSAVLTFRNDHNSESNEDNTDLYGAVWITATVVMI 146



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>C84A1_ARATH (Q42600) Cytochrome P450 84A1 (EC 1.14.-.-)|
           (Ferulate-5-hydroxylase) (F5H)
          Length = 520

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 387 GYFNVASYAPYFN-VDTDVVVDRLISSVYPMDGFFRKI 497
           G FNVA + PYF  +D   +  RL+ +   +DGF   I
Sbjct: 216 GAFNVADFIPYFGWIDPQGINKRLVKARNDLDGFIDDI 253



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>ASHH2_ARATH (Q2LAE1) Histone-lysine N-methyltransferase, H3 lysine-4 and H3|
           lysine-36 specific ASHH2 (EC 2.1.1.43) (H3-K4-HMTase)
           (H3-K36-HMTase) (Histone H3-K36 methyltransferase 8)
           (ASH1-homolog protein 2) (Protein EARLY FLOWERING IN
           SHORT DAYS) (Prote
          Length = 1759

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = +2

Query: 317 QWRRVPAS-----GESSRWRCRNTDXLERILQC 400
           +WRR+PAS      ESSRW C N    +R   C
Sbjct: 873 KWRRIPASVVGSIDESSRWICMNNSD-KRFADC 904



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>GUAA_BORPE (Q7VVM4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 530

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 8   DFPTAEFSPFPHPTLPRQKSSI 73
           DF TA+++P PHP L R  S I
Sbjct: 484 DFMTADWAPLPHPLLARVSSRI 505



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>GUAA_BORPA (Q7WAV6) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 530

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 8   DFPTAEFSPFPHPTLPRQKSSI 73
           DF TA+++P PHP L R  S I
Sbjct: 484 DFMTADWAPLPHPLLARVSSRI 505



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>GUAA_BORBR (Q7WK13) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 530

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 8   DFPTAEFSPFPHPTLPRQKSSI 73
           DF TA+++P PHP L R  S I
Sbjct: 484 DFMTADWAPLPHPLLARVSSRI 505


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,081,103
Number of Sequences: 219361
Number of extensions: 987481
Number of successful extensions: 2798
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2798
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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